BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00015279
         (2293 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...   787   0.0  
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s...   757   0.0  
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr...   757   0.0  
gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]          757   0.0  
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s...   754   0.0  
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s...   753   0.0  
ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu...   739   0.0  
gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Mor...   732   0.0  
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [...   728   0.0  
ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A...   721   0.0  
ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s...   719   0.0  
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo...   719   0.0  
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g...   719   0.0  
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s...   711   0.0  
ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutr...   708   0.0  
ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Sela...   707   0.0  
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s...   706   0.0  
gb|ESW04135.1| hypothetical protein PHAVU_011G070100g [Phaseolus...   702   0.0  
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S...   699   0.0  
ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arab...   697   0.0  

>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
            vinifera]
          Length = 1383

 Score =  787 bits (2032), Expect = 0.0
 Identities = 419/663 (63%), Positives = 497/663 (74%), Gaps = 30/663 (4%)
 Frame = -2

Query: 2292 FNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPLIMSQCGSKGSPI 2113
            +N+GKL L PGC+AAQTLEA+IT  LN+IRE    VCM+ELHWRNSPLIMSQCGSKGSPI
Sbjct: 728  YNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCGSKGSPI 787

Query: 2112 NISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSFYSGLTATEFFFH 1933
            NISQM+ACVGQQ+VGGRRAPDGFIDR+LPHFP+KSKTP+AKGFVA+SFY+GLTATEFFFH
Sbjct: 788  NISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLTATEFFFH 847

Query: 1932 TMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIVQFFYGDDGMDPA 1753
            TMGGREGLVDTAVKTADTGYMSRRLMK LEDL++ YD TVRN+NG+IVQF YGDDGMDPA
Sbjct: 848  TMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQFLYGDDGMDPA 907

Query: 1752 QMEGAEGFPLDFERLRFKVEATCPAGRDMKLSLAEMSEIINKRLSDYDTST-GCSDAXXX 1576
            +MEG +GFPL+F RL  KV+ATCPAG +  LS  ++ E + KRL +++TS  GCSDA   
Sbjct: 908  RMEGKDGFPLNFNRLFLKVKATCPAGENASLSALQIEETV-KRLKEHNTSAEGCSDAFKT 966

Query: 1575 XXXXXXXXXXKRK-----------------------------CYVSEQQLKVFLDACITR 1483
                      ++                                ++ +QL+VFLD CI+R
Sbjct: 967  NLSGFLEECKEKFKNTREALGLHGEHVGEENLDIQEKFAKNISGITSKQLQVFLDTCISR 1026

Query: 1482 LRSKXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKKIS 1303
             + K                GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN +K+IS
Sbjct: 1027 YQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRIS 1086

Query: 1302 TPIIMAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIKASIIVKLDMEKINASR 1123
            TPII A LE ++ +  A+ VKG+IE+T LGQVAKSIK+V+TS  A I V LDME I AS+
Sbjct: 1087 TPIITAALECNNNVKTARMVKGRIERTTLGQVAKSIKIVLTSRLALIAVALDMEGIQASQ 1146

Query: 1122 LCINAYIVKERIENSLTKARRKNDKLNVKVLDDVKLAVTPDADRHDAHFALHRLKNKLPT 943
            L I++ IV+E I   L   R K  + ++KVLD  KL V P  DR   HF LH LKN LPT
Sbjct: 1147 LSIDSNIVRESI---LRNRRIKLKQQHIKVLDAGKLEVHPQGDRSTIHFELHALKNLLPT 1203

Query: 942  VVVKGVDTIERAIIADEEGKKGKLNLIVEGTGLREVMGILGIDGRKTESNHIIEVQQTLG 763
            VVVKG++T+ERA+I   +  K K NL+VEGTGL+ VMG  G+ GR+T SNHIIEVQQTLG
Sbjct: 1204 VVVKGIETVERAVI--NKDNKVKYNLLVEGTGLQTVMGTEGVIGRETTSNHIIEVQQTLG 1261

Query: 762  IEAARSCIIREIKKVMQSHSMDVDIRHMMLLADVMTFKGEVLAVTRVGIAKMKESILMLA 583
            IEAAR CII EI+  M SH M +DIRHMMLLAD+MTF+GEVL +TR GI KM +S+LMLA
Sbjct: 1262 IEAARKCIINEIQYTMASHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLA 1321

Query: 582  SFEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGILKIRQRRTDSLPALKYASEP 403
            SFEKTADHLFN SV+GR++KIEGVSECIIMG+PMQ+GTGILK+RQ R   +P L Y  +P
Sbjct: 1322 SFEKTADHLFNASVSGRDDKIEGVSECIIMGIPMQLGTGILKVRQ-RLQQVPELSYGLDP 1380

Query: 402  IFA 394
            I +
Sbjct: 1381 IIS 1383


>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            rpc1-like isoform X2 [Citrus sinensis]
          Length = 1404

 Score =  757 bits (1954), Expect = 0.0
 Identities = 410/670 (61%), Positives = 486/670 (72%), Gaps = 37/670 (5%)
 Frame = -2

Query: 2292 FNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPLIMSQCGSKGSPI 2113
            +NEGKL L PGCDAAQTLEA IT  LN IRE AGK CM  L WRNSPLIMSQCGSKGSPI
Sbjct: 741  YNEGKLQLKPGCDAAQTLEAVITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPI 800

Query: 2112 NISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSFYSGLTATEFFFH 1933
            NISQMVACVGQQ+VGGRRAP+GFIDRSLPHFP+K+K P AKGFVANSFYSGL+ATEFFFH
Sbjct: 801  NISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKAKEPAAKGFVANSFYSGLSATEFFFH 860

Query: 1932 TMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIVQFFYGDDGMDPA 1753
            TMGGREGLVDTAVKTADTGYMSRRL+K LEDL++ YD +VRN+ G IVQF YGDDGMDPA
Sbjct: 861  TMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNSVRNAGGCIVQFLYGDDGMDPA 920

Query: 1752 QMEGAEGFPLDFERLRFKVEATCPAGRDMKLSLAEMSEIINKRLSDYDTSTGCSDAXXXX 1573
             MEG  G PL+F+RL  KV+ATCP      LS  ++SEI+ K+L+ Y   + CS+A    
Sbjct: 921  NMEGKSGEPLNFDRLLMKVKATCPPAGQRYLSPQQVSEIVEKQLAAYGKES-CSEAFLNS 979

Query: 1572 XXXXXXXXXKR--------------------------KCYVSEQQLKVFLDACITRLRSK 1471
                      +                             ++E+QL+VF+  C +R   K
Sbjct: 980  LRKFFEGQQDKLDKKIKFVEDIGWDDKSQILEEVTHKTSGITEKQLEVFIQTCFSRYHVK 1039

Query: 1470 XXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKKISTPII 1291
                            GEPGTQMTLKTFHFAGVASMN+T GVPRIKEIIN +K+ISTPII
Sbjct: 1040 RVEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPII 1099

Query: 1290 MAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIKASIIVKLDMEKINASRLCIN 1111
             A+LE +   + A+ VKG+IEKTLLGQVAKSIK+VMTS  ASI++ LDME I  + LCIN
Sbjct: 1100 TAELECNDNENAARVVKGRIEKTLLGQVAKSIKIVMTSRLASIVIALDMETIQDAHLCIN 1159

Query: 1110 AYIVKERIENSLTKARRKNDKLNVKVLDDVKLAVTPDADRHDAHFALHRLKNKLPTVVVK 931
            A IVKE I  +    + K  + ++KVLD  KL + P  D+   HF L+ LKN LP V+VK
Sbjct: 1160 ADIVKESIVQT---PKIKLKQQHIKVLDFRKLEIFPPVDKSKIHFELYSLKNVLPMVIVK 1216

Query: 930  GVDTIERAIIADEE---------GKKGKLNLIVEGTGLREVMGILGIDGRKTESNHIIEV 778
            G+ T+ER +IA++E         G+K K  L+VEGTGL+ VMG  GIDG KT+SNHI EV
Sbjct: 1217 GIKTVERVVIAEKEKEKRKVKENGEKKKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEV 1276

Query: 777  QQTLGIEAARSCIIREIKKVMQSHSMDVDIRHMMLLADVMTFKGEVLAVTRVGIAKMKES 598
            QQTLGIEAAR CII EI + M++H M +D RHMMLLAD+MTF+GEVL +TR GI KM +S
Sbjct: 1277 QQTLGIEAARICIIDEINETMKAHGMSIDKRHMMLLADLMTFRGEVLGITRFGIQKMDKS 1336

Query: 597  ILMLASFEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGILKIRQRRTDSL-PAL 421
            +LMLASFEKTADHLFN SVNGR+++IEGVSECIIMG+PM +GTGILKIRQR  D++ P L
Sbjct: 1337 VLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKIRQR--DAVPPML 1394

Query: 420  KY-ASEPIFA 394
            KY A +PI +
Sbjct: 1395 KYGAPDPIMS 1404


>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
            gi|557526635|gb|ESR37941.1| hypothetical protein
            CICLE_v10027681mg [Citrus clementina]
          Length = 1397

 Score =  757 bits (1954), Expect = 0.0
 Identities = 410/670 (61%), Positives = 486/670 (72%), Gaps = 37/670 (5%)
 Frame = -2

Query: 2292 FNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPLIMSQCGSKGSPI 2113
            +NEGKL L PGCDAAQTLEA IT  LN IRE AGK CM  L WRNSPLIMSQCGSKGSPI
Sbjct: 734  YNEGKLQLKPGCDAAQTLEAVITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPI 793

Query: 2112 NISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSFYSGLTATEFFFH 1933
            NISQMVACVGQQ+VGGRRAP+GFIDRSLPHFP+K+K P AKGFVANSFYSGL+ATEFFFH
Sbjct: 794  NISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKAKEPAAKGFVANSFYSGLSATEFFFH 853

Query: 1932 TMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIVQFFYGDDGMDPA 1753
            TMGGREGLVDTAVKTADTGYMSRRL+K LEDL++ YD +VRN+ G IVQF YGDDGMDPA
Sbjct: 854  TMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNSVRNAGGCIVQFLYGDDGMDPA 913

Query: 1752 QMEGAEGFPLDFERLRFKVEATCPAGRDMKLSLAEMSEIINKRLSDYDTSTGCSDAXXXX 1573
             MEG  G PL+F+RL  KV+ATCP      LS  ++SEI+ K+L+ Y   + CS+A    
Sbjct: 914  NMEGKSGEPLNFDRLLMKVKATCPPAGQRYLSPQQVSEIVEKQLAAYGKES-CSEAFLNS 972

Query: 1572 XXXXXXXXXKR--------------------------KCYVSEQQLKVFLDACITRLRSK 1471
                      +                             ++E+QL+VF+  C +R   K
Sbjct: 973  LRKFFEGQQDKLDKKIKFVEDIGWDDKSQILEEVTHKTSGITEKQLEVFIQTCFSRYHVK 1032

Query: 1470 XXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKKISTPII 1291
                            GEPGTQMTLKTFHFAGVASMN+T GVPRIKEIIN +K+ISTPII
Sbjct: 1033 RVEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPII 1092

Query: 1290 MAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIKASIIVKLDMEKINASRLCIN 1111
             A+LE +   + A+ VKG+IEKTLLGQVAKSIK+VMTS  ASI++ LDME I  + LCIN
Sbjct: 1093 TAELECNDNENAARVVKGRIEKTLLGQVAKSIKIVMTSRLASIVIALDMETIQDAHLCIN 1152

Query: 1110 AYIVKERIENSLTKARRKNDKLNVKVLDDVKLAVTPDADRHDAHFALHRLKNKLPTVVVK 931
            A IVKE I  +    + K  + ++KVLD  KL + P  D+   HF L+ LKN LP V+VK
Sbjct: 1153 ADIVKESIVQT---PKIKLKQQHIKVLDFRKLEIFPPVDKSKIHFELYSLKNVLPMVIVK 1209

Query: 930  GVDTIERAIIADEE---------GKKGKLNLIVEGTGLREVMGILGIDGRKTESNHIIEV 778
            G+ T+ER +IA++E         G+K K  L+VEGTGL+ VMG  GIDG KT+SNHI EV
Sbjct: 1210 GIKTVERVVIAEKEKEKRKVKENGEKKKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEV 1269

Query: 777  QQTLGIEAARSCIIREIKKVMQSHSMDVDIRHMMLLADVMTFKGEVLAVTRVGIAKMKES 598
            QQTLGIEAAR CII EI + M++H M +D RHMMLLAD+MTF+GEVL +TR GI KM +S
Sbjct: 1270 QQTLGIEAARICIIDEINETMKAHGMSIDKRHMMLLADLMTFRGEVLGITRFGIQKMDKS 1329

Query: 597  ILMLASFEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGILKIRQRRTDSL-PAL 421
            +LMLASFEKTADHLFN SVNGR+++IEGVSECIIMG+PM +GTGILKIRQR  D++ P L
Sbjct: 1330 VLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKIRQR--DAVPPML 1387

Query: 420  KY-ASEPIFA 394
            KY A +PI +
Sbjct: 1388 KYGAPDPIMS 1397


>gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]
          Length = 1395

 Score =  757 bits (1954), Expect = 0.0
 Identities = 404/666 (60%), Positives = 484/666 (72%), Gaps = 33/666 (4%)
 Frame = -2

Query: 2292 FNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPLIMSQCGSKGSPI 2113
            FNEGKL   PG DAAQTLEA +T  LN IR+  GKVCMKELHWRNSPLIMSQCGSKGS I
Sbjct: 734  FNEGKLKPKPGYDAAQTLEANVTAILNNIRDKTGKVCMKELHWRNSPLIMSQCGSKGSAI 793

Query: 2112 NISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSFYSGLTATEFFFH 1933
            NISQM+ACVGQQ+VGGRRAP+GFIDRSLPHF + SKTP AKGFVANSFYSGLTATEFFFH
Sbjct: 794  NISQMIACVGQQSVGGRRAPNGFIDRSLPHFHRGSKTPAAKGFVANSFYSGLTATEFFFH 853

Query: 1932 TMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIVQFFYGDDGMDPA 1753
            TM GREGLVDTAVKTA+TGYMSRRL+K LEDL++HYD TVRN++G IVQF YGDDGMDPA
Sbjct: 854  TMAGREGLVDTAVKTAETGYMSRRLIKALEDLSIHYDNTVRNASGCIVQFIYGDDGMDPA 913

Query: 1752 QMEGAEGFPLDFERLRFKVEATCPAGRDMKLSLAEMSEIINKRLSDYDTSTGCSDAXXXX 1573
             MEG  GFPL+F+RL  KV+ATCP      L +  + +++ ++L+ +D +  CS+A    
Sbjct: 914  CMEGKSGFPLNFDRLLMKVKATCPPIEQKCLHVGSIMQMLEEQLAKHDPAGVCSEAFKKS 973

Query: 1572 XXXXXXXXXKR---------KCY---------------VSEQQLKVFLDACITRLRSKXX 1465
                                 C                +S++QL+VF+  CI+R RSK  
Sbjct: 974  LKGFLKSQTNELDRVMKLVNNCAQKSEILEKVGHKISGISDRQLEVFVSTCISRYRSKVI 1033

Query: 1464 XXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKKISTPIIMA 1285
                          GEPGTQMTLKTFHFAGVASMN+T GVPRIKEIINA+K+ISTP+I A
Sbjct: 1034 EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINAAKRISTPVITA 1093

Query: 1284 KLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIKASIIVKLDMEKINASRLCINAY 1105
            +LE D   +IAQ VKG+IEKT+LGQVAKSIK+V+TS  AS+++ LDME I  + L I+A 
Sbjct: 1094 ELEFDDNPNIAQIVKGRIEKTVLGQVAKSIKIVITSRSASVVITLDMEIILDAELYIDAN 1153

Query: 1104 IVKERIENSLTKARRKNDKLNVKVLDDVKLAVTPDADRHDAHFALHRLKNKLPTVVVKGV 925
            IVKE I   L   + K  + +VKVLD  KL V P ADR   HF LH LKN LP VVVKG+
Sbjct: 1154 IVKESI---LQTPKIKLKEQHVKVLDGRKLEVVPPADRSQIHFELHSLKNLLPLVVVKGI 1210

Query: 924  DTIERAIIADEEGKKGK---------LNLIVEGTGLREVMGILGIDGRKTESNHIIEVQQ 772
             T+ER ++ D+  +K             L+VEGTGL+ VMGI GIDGR+T SNH++E++Q
Sbjct: 1211 KTVERTVVYDKNKEKKNQKEEETTKHFQLLVEGTGLQAVMGIEGIDGRRTWSNHVMEMEQ 1270

Query: 771  TLGIEAARSCIIREIKKVMQSHSMDVDIRHMMLLADVMTFKGEVLAVTRVGIAKMKESIL 592
             LGIEAAR CII EI + M+ H M +D RHMMLLADVMTF+GEVL +TR GI KM +SIL
Sbjct: 1271 ILGIEAARKCIIDEIAQTMEHHGMTIDRRHMMLLADVMTFRGEVLGITRFGIQKMDKSIL 1330

Query: 591  MLASFEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGILKIRQRRTDSLPALKYA 412
            MLASFE+TADHLFN +VNGR++KIEGV+ECIIMG+PMQIGTGILK+ Q R D  P L+Y 
Sbjct: 1331 MLASFERTADHLFNAAVNGRDDKIEGVTECIIMGIPMQIGTGILKVIQ-RVDPPPMLRYG 1389

Query: 411  SEPIFA 394
             +P+ +
Sbjct: 1390 PDPVLS 1395


>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Solanum tuberosum]
          Length = 1394

 Score =  754 bits (1948), Expect = 0.0
 Identities = 402/670 (60%), Positives = 482/670 (71%), Gaps = 39/670 (5%)
 Frame = -2

Query: 2292 FNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPLIMSQCGSKGSPI 2113
            FNEGKL + PGCDAAQTLEA++T  LN++R+  GK+CMK L WRNSPLIMSQCGSKGSPI
Sbjct: 723  FNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQCGSKGSPI 782

Query: 2112 NISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSFYSGLTATEFFFH 1933
            NISQM+ACVGQQ+VGGRRAPDGFIDRSLPHFP KSK P AKGFVA+SF+ GL+ATEFFFH
Sbjct: 783  NISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLSATEFFFH 842

Query: 1932 TMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIVQFFYGDDGMDPA 1753
            TMGGREGLVDTAVKTADTGYMSRRLMK LEDLAV+YD TVRN++  IVQF YGDDGMDP+
Sbjct: 843  TMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYGDDGMDPS 902

Query: 1752 QMEGAEGFPLDFERLRFKVEATCPAGRDMKLSLAEMSEIINKRLSDYDTST--GCSDAXX 1579
            QME  +G PL+F RL  KV+ATCP G +  LS +E+ EI+N+RLS +D +   GCS+A  
Sbjct: 903  QMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDMTPEGGCSEAFR 962

Query: 1578 XXXXXXXXXXXKRKCY------------------------------VSEQQLKVFLDACI 1489
                                                          ++++QL+VFL+ CI
Sbjct: 963  SSLSDFLIKNLAETLKNLRESLLLGEEQYEGDDRGYLEKIALNISGITKRQLQVFLNTCI 1022

Query: 1488 TRLRSKXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKK 1309
            +R   K                GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINA+KK
Sbjct: 1023 SRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK 1082

Query: 1308 ISTPIIMAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIKASIIVKLDMEKINA 1129
            I+TPII  KL   + +  A+ +K +IEKTLLGQVAKS+K+V+ S  ASI + LDME I  
Sbjct: 1083 ITTPIITTKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVLASRLASIAISLDMETIQV 1142

Query: 1128 SRLCINAYIVKERIENSLTKARRKNDKLNVKVLDDVKLAVTPDADRHDAHFALHRLKNKL 949
            S+LCI+AY VK+ I   L  ++ K  +  +KVL+  KL V P A++   HF LHRLKNKL
Sbjct: 1143 SQLCIDAYTVKQSI---LQTSKIKLKEHQIKVLNPRKLEVFPQANKDKLHFELHRLKNKL 1199

Query: 948  PTVVVKGVDTIERAIIADEEGKKGK-------LNLIVEGTGLREVMGILGIDGRKTESNH 790
            P VVVKG+ T++RA++  E+ K  K         L+VEGTGL  VMGI G+DGR T+SNH
Sbjct: 1200 PAVVVKGITTVQRAVVNKEQQKDRKNDVKGETYELLVEGTGLLAVMGIEGVDGRYTKSNH 1259

Query: 789  IIEVQQTLGIEAARSCIIREIKKVMQSHSMDVDIRHMMLLADVMTFKGEVLAVTRVGIAK 610
            I+EVQ TLGIEAAR  II EI   M SH M +D+RHMMLLAD+MT+KGEVL +TR G+ K
Sbjct: 1260 IMEVQNTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQK 1319

Query: 609  MKESILMLASFEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGILKIRQRRTDSL 430
            MK+S+LMLASFEKT DHLFN SVNGR++KIEGV+ECIIMG+PM IGTG+ K+RQR     
Sbjct: 1320 MKDSVLMLASFEKTTDHLFNASVNGRDDKIEGVTECIIMGIPMTIGTGMFKLRQRVEQ-- 1377

Query: 429  PALKYASEPI 400
              L Y  +PI
Sbjct: 1378 VELNYQPDPI 1387


>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
            lycopersicum]
          Length = 1390

 Score =  753 bits (1945), Expect = 0.0
 Identities = 398/655 (60%), Positives = 477/655 (72%), Gaps = 39/655 (5%)
 Frame = -2

Query: 2292 FNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPLIMSQCGSKGSPI 2113
            FNEGKL + PGCDAAQTLEA++T  LN++R+  GK+CMK L WRNSPLIMSQCGSKGSPI
Sbjct: 723  FNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQCGSKGSPI 782

Query: 2112 NISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSFYSGLTATEFFFH 1933
            NISQM+ACVGQQ+VGGRRAPDGFIDRSLPHFP KSK P AKGFVA+SF+ GL+ATEFFFH
Sbjct: 783  NISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLSATEFFFH 842

Query: 1932 TMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIVQFFYGDDGMDPA 1753
            TMGGREGLVDTAVKTADTGYMSRRLMK LEDLAV+YD TVRN++  IVQF YGDDGMDP+
Sbjct: 843  TMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYGDDGMDPS 902

Query: 1752 QMEGAEGFPLDFERLRFKVEATCPAGRDMKLSLAEMSEIINKRLSDYDTST--GCSDAXX 1579
            +ME  +G PL+F RL  KV+ATCP G +  LS +E+ EI+N+RLS +D +   GCS+A  
Sbjct: 903  RMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDMTPEGGCSEAFR 962

Query: 1578 XXXXXXXXXXXKRKCY------------------------------VSEQQLKVFLDACI 1489
                                                          ++++QL+VFL+ CI
Sbjct: 963  ASLSDFLIKSLAETLKNLRESLLLGEEQYEGDDRGYLEKIVLNISGITKKQLQVFLNTCI 1022

Query: 1488 TRLRSKXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKK 1309
            +R   K                GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINA+KK
Sbjct: 1023 SRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK 1082

Query: 1308 ISTPIIMAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIKASIIVKLDMEKINA 1129
            I+TPII AKL     +  A+ +K +IEKTLLGQVAKS+K+V+ S  ASI + LDME I  
Sbjct: 1083 ITTPIITAKLLSAGNLTAARMIKARIEKTLLGQVAKSVKIVLASRLASIAISLDMETIQV 1142

Query: 1128 SRLCINAYIVKERIENSLTKARRKNDKLNVKVLDDVKLAVTPDADRHDAHFALHRLKNKL 949
            S+LCI+AY VK+ I   L  ++ K  +  +KVL+  KL V P A++   HF LHRLKNKL
Sbjct: 1143 SQLCIDAYTVKQSI---LQTSKIKLKEHQIKVLNPRKLEVFPQANKDKLHFELHRLKNKL 1199

Query: 948  PTVVVKGVDTIERAIIADEEGKKGK-------LNLIVEGTGLREVMGILGIDGRKTESNH 790
            P VVVKG+ T++RA++  E+ K  K         L+VEGTGL  VMGI G+DGR T+SNH
Sbjct: 1200 PAVVVKGITTVQRAVVNKEQQKDRKNDVKGETYELLVEGTGLLAVMGIEGVDGRYTKSNH 1259

Query: 789  IIEVQQTLGIEAARSCIIREIKKVMQSHSMDVDIRHMMLLADVMTFKGEVLAVTRVGIAK 610
            I+EVQ TLGIEAAR  II EI   M SH M +D+RHMMLLAD+MT+KGEVL +TR G+ K
Sbjct: 1260 IMEVQHTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQK 1319

Query: 609  MKESILMLASFEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGILKIRQR 445
            MK+S+LMLASFEKT DHLFN SVNGR++KIEGV+ECIIMG+PM IGTG+ K+RQR
Sbjct: 1320 MKDSVLMLASFEKTTDHLFNASVNGRDDKIEGVTECIIMGIPMTIGTGMFKLRQR 1374


>ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus
            communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA
            polymerase III largest subunit, putative [Ricinus
            communis]
          Length = 1383

 Score =  739 bits (1908), Expect = 0.0
 Identities = 400/679 (58%), Positives = 484/679 (71%), Gaps = 46/679 (6%)
 Frame = -2

Query: 2292 FNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPLIMSQCGSKGSPI 2113
            +NEGKL L PGCDA QTLE++IT+KLN++RE AG VCMKELHWRNSPLIMSQCGSKGS I
Sbjct: 709  YNEGKLLLKPGCDATQTLESEITEKLNKLREEAGDVCMKELHWRNSPLIMSQCGSKGSVI 768

Query: 2112 NISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSFYSGLTATEFFFH 1933
            NISQMVACVGQQ+VGGRRAPDGFIDRSLPHFP+KSKTP AKGFVANSFYSGL ATEFFFH
Sbjct: 769  NISQMVACVGQQSVGGRRAPDGFIDRSLPHFPRKSKTPAAKGFVANSFYSGLMATEFFFH 828

Query: 1932 TMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIVQFFYGDDGMDPA 1753
            TM GREGLVDTAVKTADTGYMSRRL+K LEDL++ YD TVRN++G IVQF YGDDG+DPA
Sbjct: 829  TMAGREGLVDTAVKTADTGYMSRRLIKGLEDLSIQYDNTVRNASGCIVQFLYGDDGLDPA 888

Query: 1752 QMEGAEGFPLDFERLRFKVEATCPAGRDMKLSLAEMSEIINKRLSDYDTSTG--CSDAXX 1579
             MEG  G PL+ +RL  KV+ATCP   +  LS  ++S+++   L  +D + G  CS+A  
Sbjct: 889  SMEGKGGVPLNLDRLFSKVKATCPVREEDYLSPLDISDVVENLLLKHDMALGGICSEAFK 948

Query: 1578 XXXXXXXXXXXKR------------------------------------KCY-VSEQQLK 1510
                       KR                                    K + VSE+Q++
Sbjct: 949  KSLTSFLGSHAKRLESMMKLADGVEDPTSENIQTGGIRGNSKIIERLAHKIFGVSERQIE 1008

Query: 1509 VFLDACITRLRSKXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE 1330
            VF+  CI R   K                GEPGTQMTLKTFHFAGVASMN+T GVPRIKE
Sbjct: 1009 VFVKTCINRYLWKRVEPGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKE 1068

Query: 1329 IINASKKISTPIIMAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIKASIIVKL 1150
            IIN +KKISTPII A+LE ++ +  A+  KG+I+KT+LGQVAKSIK+VMTS  AS+++ L
Sbjct: 1069 IINGAKKISTPIITAELEQNTNVTAARIAKGRIQKTVLGQVAKSIKIVMTSRSASVVITL 1128

Query: 1149 DMEKINASRLCINAYIVKERIENSLTKARRKNDKLNVKVLDDVKLAVTPDADRHDAHFAL 970
            DM+ I  ++L ++A IVKE I   L   R K    ++KVLD  KL V P  DR   HF L
Sbjct: 1129 DMKTIQNAQLSLDANIVKEAI---LRTPRIKLKPQHIKVLDTRKLEVIPLGDRERVHFEL 1185

Query: 969  HRLKNKLPTVVVKGVDTIERAIIADE--EGKKGK-----LNLIVEGTGLREVMGILGIDG 811
            H LKN LP+++V+G+ T+ERA+IA +  +GK         N++VEG GL  VMG  G+DG
Sbjct: 1186 HNLKNLLPSIIVQGIKTVERAVIAQKKHDGKANDQELPTYNMLVEGMGLDLVMGTEGVDG 1245

Query: 810  RKTESNHIIEVQQTLGIEAARSCIIREIKKVMQSHSMDVDIRHMMLLADVMTFKGEVLAV 631
             KT SNH++EVQ+ LGIEAAR CII EI + M+ H M +DIRHMMLL D+MTFKGEVL +
Sbjct: 1246 CKTTSNHVMEVQKFLGIEAARKCIIDEINQTMEHHGMSIDIRHMMLLGDLMTFKGEVLGI 1305

Query: 630  TRVGIAKMKESILMLASFEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGILKIR 451
            TR GI KM +S+LMLASFEKTADHL++ +V GR++KIEGVSECIIMG+PMQIGTGILK+ 
Sbjct: 1306 TRFGIQKMDKSVLMLASFEKTADHLYHAAVFGRDDKIEGVSECIIMGIPMQIGTGILKV- 1364

Query: 450  QRRTDSLPALKYASEPIFA 394
            Q+R D  P L Y S+ I +
Sbjct: 1365 QQRVDPPPVLNYGSDSIIS 1383


>gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
          Length = 1179

 Score =  732 bits (1890), Expect = 0.0
 Identities = 404/669 (60%), Positives = 479/669 (71%), Gaps = 36/669 (5%)
 Frame = -2

Query: 2292 FNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPLIMSQCGSKGSPI 2113
            + EG L   PGCDAAQ+LEA IT  LN+IRE  GK+CMK L WRNSPLIMSQCGSKGS I
Sbjct: 514  YKEGNLPPEPGCDAAQSLEAVITGILNKIREETGKLCMKALPWRNSPLIMSQCGSKGSLI 573

Query: 2112 NISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSFYSGLTATEFFFH 1933
            NISQMVACVGQQ+VGGRRAP+GFIDRSLPHFP+K KTP AKGFV++SFY GL+ATEFFFH
Sbjct: 574  NISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKDKTPAAKGFVSHSFYDGLSATEFFFH 633

Query: 1932 TMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIVQFFYGDDGMDPA 1753
            TMGGREGLVDTAVKTADTGYMSRRL+K LEDL VHYD TVRN++  I+QF YGDDGMDPA
Sbjct: 634  TMGGREGLVDTAVKTADTGYMSRRLIKALEDLFVHYDNTVRNASACIIQFCYGDDGMDPA 693

Query: 1752 QMEGAEGFPLDFERLRFKVEATCPAGRDMKLSLAEMSEIINKRLSDYDTST--GCSDAXX 1579
             MEG  G PL+FERL  K +ATCPAG   KLS  ++SE++  RLS  D +   GCS A  
Sbjct: 694  HMEGKNGAPLNFERLFLKAKATCPAGGTEKLSPEKVSELVESRLSKKDMTPEGGCSAAFK 753

Query: 1578 XXXXXXXXXXXKR------KCYVSE-----------------------QQLKVFLDACIT 1486
                       K        C  +E                       +QL+VFLD CI+
Sbjct: 754  NSLKSFLDNYVKAFKRTWDPCESTEGHAKMENSATTKNIVLQLSGATARQLEVFLDTCIS 813

Query: 1485 RLRSKXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKKI 1306
            R  SK                GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN +KKI
Sbjct: 814  RYHSKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKKI 873

Query: 1305 STPIIMAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIKASIIVKLDMEKINAS 1126
            STPII A LE D+ ++ A+ V+G+IEK  LGQVAKSIK VMTS  AS+++ LDME+I  +
Sbjct: 874  STPIITAILECDNNVNFARIVRGRIEKISLGQVAKSIKTVMTSRVASVVITLDMERIQDA 933

Query: 1125 RLCINAYIVKERIENSLTKARRKNDKLNVKVLDDVKLAVTP-DADRHDAHFALHRLKNKL 949
             L I+A +V++ I   L   R K  K +++VLD  KL + P +++R   +  L  L   L
Sbjct: 934  LLSIDANVVRDSI---LQTPRIKLKKEHIRVLDFKKLEILPYESNRSKLYHHLQFLAKML 990

Query: 948  PTVVVKGVDTIERAIIADEEGKKG----KLNLIVEGTGLREVMGILGIDGRKTESNHIIE 781
              ++VKG+ T+ERA+I+ E+ KK     K  L+VEGTGL  VMG  G+DGR T++NHIIE
Sbjct: 991  QNILVKGIKTVERAVISSEKDKKTDISKKYKLLVEGTGLLGVMGTEGVDGRNTKTNHIIE 1050

Query: 780  VQQTLGIEAARSCIIREIKKVMQSHSMDVDIRHMMLLADVMTFKGEVLAVTRVGIAKMKE 601
            VQQTLGIEAAR+CII EI+  M+SH M +D RHMMLLADVMT +GEVL +TR GI KM +
Sbjct: 1051 VQQTLGIEAARTCIIDEIEYTMKSHGMSIDTRHMMLLADVMTSRGEVLGITRFGIQKMDK 1110

Query: 600  SILMLASFEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGILKIRQRRTDSLPAL 421
            S+LMLASFEKTADHLFN SVNGRE+KIEGVSECIIMG+PMQIGTG++K+RQ R D  P L
Sbjct: 1111 SVLMLASFEKTADHLFNASVNGREDKIEGVSECIIMGIPMQIGTGMIKVRQ-RVDVPPML 1169

Query: 420  KYASEPIFA 394
             Y  +PI +
Sbjct: 1170 SYGPKPILS 1178


>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 1394

 Score =  728 bits (1878), Expect = 0.0
 Identities = 394/663 (59%), Positives = 477/663 (71%), Gaps = 47/663 (7%)
 Frame = -2

Query: 2292 FNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPLIMSQCGSKGSPI 2113
            +N G+L L  GCDA QTLE +IT++LN++RE AG VCMKELHWRNSPLIMSQCGSKGSPI
Sbjct: 735  YNGGRLALKSGCDATQTLETEITERLNKLREEAGDVCMKELHWRNSPLIMSQCGSKGSPI 794

Query: 2112 NISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSFYSGLTATEFFFH 1933
            NISQM+ACVGQQ+VGG RAPDGFIDRSLPHFP+KSKTP AKGFVANSFYSGL+ATEFFFH
Sbjct: 795  NISQMIACVGQQSVGGSRAPDGFIDRSLPHFPRKSKTPAAKGFVANSFYSGLSATEFFFH 854

Query: 1932 TMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIVQFFYGDDGMDPA 1753
            TMGGREGLVDTAVKTADTGYM+RRL K LEDL V YD TV+++ G IVQF YGDDG+DPA
Sbjct: 855  TMGGREGLVDTAVKTADTGYMARRLSKGLEDLCVQYDNTVQDAGGGIVQFLYGDDGLDPA 914

Query: 1752 QMEGAEGFPLDFERLRFKVEATCPAGRDMKLSLAEMSEIINKRLSDYDTSTG--CSDAXX 1579
             MEG  G PL+F+RL  KV+ATC A  D  LS +++S I+   L  ++ +    CS++  
Sbjct: 915  IMEGKAGVPLNFDRLFMKVKATCGAEEDEYLSPSDISNIVQSLLLKHNGTLDGICSESFR 974

Query: 1578 XXXXXXXXXXXKR-KCY-------------------------------------VSEQQL 1513
                       KR +C                                      ++E+QL
Sbjct: 975  KSLSSFLGDQAKRLECLMKLVDGVEVENFENIKNVEGLTGISKNTEKIAQKVSGITEKQL 1034

Query: 1512 KVFLDACITRLRSKXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIK 1333
            +VFL  C+ R   K                GEPGTQMTLKTFHFAGVASMN+T GVPRIK
Sbjct: 1035 EVFLKTCLDRYVWKRIEPGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIK 1094

Query: 1332 EIINASKKISTPIIMAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIKASIIVK 1153
            EIIN +K+ISTPII  +LE +S ++ A+ +KG+I+KT+LGQVAKSIK+VMTS  AS+ V 
Sbjct: 1095 EIINGAKRISTPIITVELEHNSNVNAARIIKGRIQKTVLGQVAKSIKIVMTSRSASVKVT 1154

Query: 1152 LDMEKINASRLCINAYIVKERIENSLTKARRKNDKLNVKVLDDVKLAVTPDADRHDAHFA 973
            LDM+ I  ++L ++A IV+E I  +  K +RK  ++NV  L+D KL V P  DR+  HF 
Sbjct: 1155 LDMKTIREAQLSLDANIVRELILET-PKIKRKLQRINV--LEDGKLEVFPGGDRNKLHFE 1211

Query: 972  LHRLKNKLPTVVVKGVDTIERAIIA-----DEEGKKG--KLNLIVEGTGLREVMGILGID 814
            LH LKN LP VVVKG+ T+ER +IA     D E  +G  K N+ VEG GL+ VMG  G+D
Sbjct: 1212 LHSLKNMLPAVVVKGIKTVERVVIAQKKLDDAENDQGGPKYNMFVEGMGLQAVMGTEGVD 1271

Query: 813  GRKTESNHIIEVQQTLGIEAARSCIIREIKKVMQSHSMDVDIRHMMLLADVMTFKGEVLA 634
            GRKT+SNHIIEVQ+TLGIEAAR CII EIK  M+SH M +DIRHMMLLADVMT +G VL 
Sbjct: 1272 GRKTKSNHIIEVQETLGIEAARKCIIDEIKGTMESHGMSIDIRHMMLLADVMTSRGVVLG 1331

Query: 633  VTRVGIAKMKESILMLASFEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGILKI 454
            +TR GI KM +S+LMLASFEKT+DHLFN SV G+++KIEGVSECIIMG+P+ IGTG+LKI
Sbjct: 1332 ITRFGIQKMDKSVLMLASFEKTSDHLFNASVKGKDDKIEGVSECIIMGIPVAIGTGVLKI 1391

Query: 453  RQR 445
            +QR
Sbjct: 1392 QQR 1394


>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
            gi|548832896|gb|ERM95665.1| hypothetical protein
            AMTR_s00023p00196820 [Amborella trichopoda]
          Length = 1383

 Score =  721 bits (1860), Expect = 0.0
 Identities = 388/665 (58%), Positives = 473/665 (71%), Gaps = 34/665 (5%)
 Frame = -2

Query: 2292 FNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPLIMSQCGSKGSPI 2113
            +++GKL+L PGC+AAQTLEA+IT+ LN IR+ A KVCM+ELHWRNSPLIMSQCGSKGSPI
Sbjct: 722  YDKGKLSLKPGCNAAQTLEAEITRVLNGIRDAAAKVCMEELHWRNSPLIMSQCGSKGSPI 781

Query: 2112 NISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSFYSGLTATEFFFH 1933
            NISQM+ACVGQQ+VGGRRAP+GFIDRSLPHFP+  KTP AKGFVANSFY+GLTA EFFFH
Sbjct: 782  NISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKTPAAKGFVANSFYTGLTAAEFFFH 841

Query: 1932 TMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIVQFFYGDDGMDPA 1753
            TMGGREGLVDTAVKTADTGY+SRRL+K LEDL+ HYD TVRNS+GTI+QF YGDDGMDPA
Sbjct: 842  TMGGREGLVDTAVKTADTGYLSRRLIKSLEDLSTHYDDTVRNSSGTIIQFSYGDDGMDPA 901

Query: 1752 QMEGAEGFPLDFERLRFKVEATCPAGRDMKLSLAEMSEIINKRLSDYDTST--GCS---- 1591
            +MEG  G PL+ +RL  K++ATCPA     LS +E+S I+N RLS +D +   GCS    
Sbjct: 902  KMEGKSGVPLNLDRLFMKIKATCPASVSASLSPSEISTIVNDRLSKHDMTPERGCSMAFK 961

Query: 1590 -------------------------DAXXXXXXXXXXXXXKRKCYVSEQQLKVFLDACIT 1486
                                     D                   +S QQL+VFL+ CI+
Sbjct: 962  EELSNFIKKRMDAIKKTRNMLGLDEDCVDKEKFSGLEHVAANISGISRQQLRVFLETCIS 1021

Query: 1485 RLRSKXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKKI 1306
            R   K                GEPGTQMTLKTFHFAGVASMN+TLGVPRIKEI+ ASKKI
Sbjct: 1022 RYHLKRIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEILGASKKI 1081

Query: 1305 STPIIMAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIKASIIVKLDMEKINAS 1126
            STPII A L  D+    A+ VKG+IEKTLLG+VAK++K+ +T  +ASI + LDM++I A 
Sbjct: 1082 STPIITATLVCDNDEKSARIVKGRIEKTLLGEVAKTVKISVTPTQASINITLDMKRIEAL 1141

Query: 1125 RLCINAYIVKERIENSLTKARRKNDKLNVK---VLDDVKLAVTPDADRHDAHFALHRLKN 955
            ++ I+A  V + I  +L KA+    KL VK    L D    + P+  R +  ++LH L++
Sbjct: 1142 QMAIDAKTVADSISENL-KAKVSRTKLKVKPTFTLPDKLKILLPEIGRKEVLYSLHLLQS 1200

Query: 954  KLPTVVVKGVDTIERAIIADEEGKKGKLNLIVEGTGLREVMGILGIDGRKTESNHIIEVQ 775
             LP ++VKG+ T+ERA+I      KGKLNL+VEGT L  VMG  G+DGR T SNHI+EV+
Sbjct: 1201 LLPKIIVKGIPTVERAVI---NNVKGKLNLLVEGTNLLAVMGTPGVDGRNTTSNHIVEVE 1257

Query: 774  QTLGIEAARSCIIREIKKVMQSHSMDVDIRHMMLLADVMTFKGEVLAVTRVGIAKMKESI 595
             TLGIEAAR  II EI+  M+SH M +D+RHMMLLAD+MTF+G VL + R GI KMKES+
Sbjct: 1258 GTLGIEAARKSIIDEIQYTMKSHGMSIDLRHMMLLADLMTFRGLVLGIQRFGITKMKESV 1317

Query: 594  LMLASFEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGILKIRQRRTDSLPALKY 415
            LMLASFE+TAD LF+ +  GR + I GVSECIIMGVPMQIGTGIL + Q+R + L  L Y
Sbjct: 1318 LMLASFERTADILFDATTRGRVDTIAGVSECIIMGVPMQIGTGILSV-QQRPEQLAKLTY 1376

Query: 414  ASEPI 400
              +PI
Sbjct: 1377 GPDPI 1381


>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Glycine
            max]
          Length = 1391

 Score =  719 bits (1856), Expect = 0.0
 Identities = 392/664 (59%), Positives = 479/664 (72%), Gaps = 31/664 (4%)
 Frame = -2

Query: 2292 FNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPLIMSQCGSKGSPI 2113
            FN+GKL L+ GCDAAQTLE +IT  LN +R+ AGKVCM+ LHWRNSPLIMSQCGSKGS I
Sbjct: 734  FNKGKLELLAGCDAAQTLETRITGVLNGLRDTAGKVCMQTLHWRNSPLIMSQCGSKGSSI 793

Query: 2112 NISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSFYSGLTATEFFFH 1933
            NISQMVACVGQQ+VGGRR P+GFIDRSLPHFP+KSKTP AKGFVANSFYSGL+ATEFFFH
Sbjct: 794  NISQMVACVGQQSVGGRRTPNGFIDRSLPHFPRKSKTPAAKGFVANSFYSGLSATEFFFH 853

Query: 1932 TMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIVQFFYGDDGMDPA 1753
            TMGGREGLVDTAVKTADTGYMSR+LMK LEDL +HYD TVRN+ G+IVQF YGDDGMDPA
Sbjct: 854  TMGGREGLVDTAVKTADTGYMSRQLMKSLEDLFLHYDYTVRNAGGSIVQFCYGDDGMDPA 913

Query: 1752 QMEGAEGFPLDFERLRFKVEATCPAGRDMK-LSLAEMSEIINKRLSDYDTS--------- 1603
             MEG  G PL+FERL  K +A CP   D + LS +++S++++++LS++D S         
Sbjct: 914  GMEGKNGKPLNFERLFLKSKAICPNDEDDEILSSSDVSKVVHEKLSEFDMSRLAEKGVFE 973

Query: 1602 TGCS-------------------DAXXXXXXXXXXXXXKRKCYVSEQQLKVFLDACITRL 1480
             G S                   +              +R   ++ +QL VFL+ C++R 
Sbjct: 974  VGFSADFVESLQSFIKDNAKLTEEGFTDEHSQNLKKFGQRISGITRKQLDVFLNICLSRY 1033

Query: 1479 RSKXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKKIST 1300
             SK                GEPGTQMTLKTFHFAGVASMNVTLGVPR+KEI+N +KKIST
Sbjct: 1034 HSKKMEAGAPVGATGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRVKEIMNGNKKIST 1093

Query: 1299 PIIMAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIKASIIVKLDMEKINASRL 1120
            PII A LE D   + A+ VKG+IEKT LGQVAKSIK+VMTS  AS+++ LDM++I  + L
Sbjct: 1094 PIITAILERDDNANTARIVKGRIEKTNLGQVAKSIKVVMTSRSASVVITLDMKRIQDAHL 1153

Query: 1119 CINAYIVKERIENSLTKARRKNDKLNVKVLDDVKLAVTP-DADRHDAHFALHRLKNKLPT 943
             I+A IVKE I   L   + K    ++K+LD  KL V P D DR   HF LH LKN LPT
Sbjct: 1154 NIDANIVKESI---LRTKKTKLKPEHIKILDIKKLEVVPQDVDRSKIHFQLHYLKNLLPT 1210

Query: 942  VVVKGVDTIERAIIADEEGKKGKLNLIVEGTGLREVMGILGIDGRKTESNHIIEVQQTLG 763
            VVVKG+ T++R +I+ ++ K  K  L+VEGTG REVMG+ GIDGRKT SNHI EV+ TLG
Sbjct: 1211 VVVKGIKTVDRVVIS-KDTKAEKFRLLVEGTGFREVMGVEGIDGRKTVSNHIHEVRDTLG 1269

Query: 762  IEAARSCIIREIKKVM-QSHSMDVDIRHMMLLADVMTFKGEVLAVTRVGIAKMKESILML 586
            IEAAR  I++EIK  M  +H M++DIRHMMLLAD+MT  G +L + R GI+KM +S+LML
Sbjct: 1270 IEAARESIVKEIKYTMVDTHGMNIDIRHMMLLADMMTATGHILGINRFGISKMGKSVLML 1329

Query: 585  ASFEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGILKIRQRRTDSLPALKYASE 406
            ASFE+TAD LF  SV GR++ I GVSE IIMG+P+QIGTG++K++QR     P L + + 
Sbjct: 1330 ASFERTADILFQASVRGRDDSIGGVSESIIMGIPIQIGTGMIKVKQRLDP--PELPHGTS 1387

Query: 405  PIFA 394
            PI +
Sbjct: 1388 PILS 1391


>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
          Length = 1321

 Score =  719 bits (1856), Expect = 0.0
 Identities = 392/667 (58%), Positives = 482/667 (72%), Gaps = 34/667 (5%)
 Frame = -2

Query: 2292 FNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPLIMSQCGSKGSPI 2113
            +++G L L PGC+AAQTLE  IT+ LNEIRE AGKVCM  LHWRNSPLIMSQCGSKGSPI
Sbjct: 660  YSKGALRLQPGCNAAQTLEQSITRVLNEIREEAGKVCMNTLHWRNSPLIMSQCGSKGSPI 719

Query: 2112 NISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSFYSGLTATEFFFH 1933
            NISQMVACVGQQ+VGGRRAP+GFIDR+LPHFP  SKTP AKGFVANSFY+GLTATEFFFH
Sbjct: 720  NISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEFFFH 779

Query: 1932 TMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIVQFFYGDDGMDPA 1753
            TMGGREGLVDTAVKTA+TGYMSRRLMK LEDL+V YD TVRN++G IVQF YGDDGMDPA
Sbjct: 780  TMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGDDGMDPA 839

Query: 1752 QMEGAEGFPLDFERLRFKVEATCPAGRDMKLSLAEMSEIINKRLSDYDTST--GCS---- 1591
            +MEG +G PL+ ++L  KV ATCP      LS  E+ +I+N +LS++D S+  GCS    
Sbjct: 840  KMEGKDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQILNDKLSEHDASSDDGCSEKFK 899

Query: 1590 -------------------------DAXXXXXXXXXXXXXKRKCYVSEQQLKVFLDACIT 1486
                                     D                   +S +QL+VFLD C++
Sbjct: 900  QLLTYFLEDRIKLLKSTRRALLLDEDHVGERHSSFEESIAANISGISVKQLQVFLDTCLS 959

Query: 1485 RLRSKXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKKI 1306
            R   K                GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINA+KKI
Sbjct: 960  RYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKI 1019

Query: 1305 STPIIMAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIKASIIVKLDMEKINAS 1126
            STPII A+L  +  +  A+ VKG +EK +LG+VA++IK+V+ S + +++VKLDM++I A 
Sbjct: 1020 STPIITAELLSEKDVLSARIVKGSMEKAVLGEVAEAIKIVLKSSQPNLVVKLDMQRIEAL 1079

Query: 1125 RLCINAYIVKERIENSLTKARRKNDKLNVKVLDDVKLAVTPDA-DRHDAHFALHRLKNKL 949
             + I+A  V+  I N   K + K++  +V+V+D  KL + P   D+    + LH LK+ L
Sbjct: 1080 HMGISADSVQLSILNH-PKIKLKSE--HVRVIDKSKLRIYPAGIDKSKLLYELHHLKSML 1136

Query: 948  PTVVVKGVDTIERAIIAD--EEGKKGKLNLIVEGTGLREVMGILGIDGRKTESNHIIEVQ 775
            P V+VKG+ T+ERA+I++  EE  K +  L+VEGT L  VMG  G+D  KT+SNHI+EV 
Sbjct: 1137 PKVIVKGIPTVERAVISETGEENDK-RYKLLVEGTNLLAVMGTPGVDAMKTKSNHIMEVN 1195

Query: 774  QTLGIEAARSCIIREIKKVMQSHSMDVDIRHMMLLADVMTFKGEVLAVTRVGIAKMKESI 595
            +TLGIEAAR  II EI+  M+SH M++D RHMMLLAD+MT+KGE+L +TR GIAKMK S+
Sbjct: 1196 RTLGIEAARRSIIDEIQYTMKSHGMNIDSRHMMLLADLMTYKGEILGITRYGIAKMKSSV 1255

Query: 594  LMLASFEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGILKIRQRRTDSLPALKY 415
            LMLASFEKTA+HLFN S +GRE++IEGVSECIIMG+PMQ+GTGILK+RQ R D LP  KY
Sbjct: 1256 LMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQ-RLDHLPEFKY 1314

Query: 414  ASEPIFA 394
              +PI A
Sbjct: 1315 QPDPILA 1321


>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
            gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
            Japonica Group] gi|38347455|emb|CAD41360.2|
            OSJNBa0076N16.24 [Oryza sativa Japonica Group]
            gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
            Japonica Group] gi|116310339|emb|CAH67354.1|
            OSIGBa0130B08.14 [Oryza sativa Indica Group]
            gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
            Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|218195112|gb|EEC77539.1| hypothetical protein
            OsI_16437 [Oryza sativa Indica Group]
          Length = 1383

 Score =  719 bits (1856), Expect = 0.0
 Identities = 392/667 (58%), Positives = 482/667 (72%), Gaps = 34/667 (5%)
 Frame = -2

Query: 2292 FNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPLIMSQCGSKGSPI 2113
            +++G L L PGC+AAQTLE  IT+ LNEIRE AGKVCM  LHWRNSPLIMSQCGSKGSPI
Sbjct: 722  YSKGALRLQPGCNAAQTLEQSITRVLNEIREEAGKVCMNTLHWRNSPLIMSQCGSKGSPI 781

Query: 2112 NISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSFYSGLTATEFFFH 1933
            NISQMVACVGQQ+VGGRRAP+GFIDR+LPHFP  SKTP AKGFVANSFY+GLTATEFFFH
Sbjct: 782  NISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEFFFH 841

Query: 1932 TMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIVQFFYGDDGMDPA 1753
            TMGGREGLVDTAVKTA+TGYMSRRLMK LEDL+V YD TVRN++G IVQF YGDDGMDPA
Sbjct: 842  TMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGDDGMDPA 901

Query: 1752 QMEGAEGFPLDFERLRFKVEATCPAGRDMKLSLAEMSEIINKRLSDYDTST--GCS---- 1591
            +MEG +G PL+ ++L  KV ATCP      LS  E+ +I+N +LS++D S+  GCS    
Sbjct: 902  KMEGKDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQILNDKLSEHDASSDDGCSEKFK 961

Query: 1590 -------------------------DAXXXXXXXXXXXXXKRKCYVSEQQLKVFLDACIT 1486
                                     D                   +S +QL+VFLD C++
Sbjct: 962  QLLTYFLEDRIKLLKSTRRALLLDEDHVGERHSSFEESIAANISGISVKQLQVFLDTCLS 1021

Query: 1485 RLRSKXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKKI 1306
            R   K                GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINA+KKI
Sbjct: 1022 RYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKI 1081

Query: 1305 STPIIMAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIKASIIVKLDMEKINAS 1126
            STPII A+L  +  +  A+ VKG +EK +LG+VA++IK+V+ S + +++VKLDM++I A 
Sbjct: 1082 STPIITAELLSEKDVLSARIVKGSMEKAVLGEVAEAIKIVLKSSQPNLVVKLDMQRIEAL 1141

Query: 1125 RLCINAYIVKERIENSLTKARRKNDKLNVKVLDDVKLAVTPDA-DRHDAHFALHRLKNKL 949
             + I+A  V+  I N   K + K++  +V+V+D  KL + P   D+    + LH LK+ L
Sbjct: 1142 HMGISADSVQLSILNH-PKIKLKSE--HVRVIDKSKLRIYPAGIDKSKLLYELHHLKSML 1198

Query: 948  PTVVVKGVDTIERAIIAD--EEGKKGKLNLIVEGTGLREVMGILGIDGRKTESNHIIEVQ 775
            P V+VKG+ T+ERA+I++  EE  K +  L+VEGT L  VMG  G+D  KT+SNHI+EV 
Sbjct: 1199 PKVIVKGIPTVERAVISETGEENDK-RYKLLVEGTNLLAVMGTPGVDAMKTKSNHIMEVN 1257

Query: 774  QTLGIEAARSCIIREIKKVMQSHSMDVDIRHMMLLADVMTFKGEVLAVTRVGIAKMKESI 595
            +TLGIEAAR  II EI+  M+SH M++D RHMMLLAD+MT+KGE+L +TR GIAKMK S+
Sbjct: 1258 RTLGIEAARRSIIDEIQYTMKSHGMNIDSRHMMLLADLMTYKGEILGITRYGIAKMKSSV 1317

Query: 594  LMLASFEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGILKIRQRRTDSLPALKY 415
            LMLASFEKTA+HLFN S +GRE++IEGVSECIIMG+PMQ+GTGILK+RQ R D LP  KY
Sbjct: 1318 LMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQ-RLDHLPEFKY 1376

Query: 414  ASEPIFA 394
              +PI A
Sbjct: 1377 QPDPILA 1383


>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
            italica]
          Length = 1397

 Score =  711 bits (1834), Expect = 0.0
 Identities = 390/667 (58%), Positives = 475/667 (71%), Gaps = 34/667 (5%)
 Frame = -2

Query: 2292 FNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPLIMSQCGSKGSPI 2113
            F +G L L PGC+AAQTLE KIT  LNEIR  AG VCM  LHWRNSPLIMSQCGSKGSPI
Sbjct: 735  FAKGALALHPGCNAAQTLEHKITGVLNEIRTAAGNVCMDTLHWRNSPLIMSQCGSKGSPI 794

Query: 2112 NISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSFYSGLTATEFFFH 1933
            NISQMVACVGQQ+VGGRRAPDGFIDR+LPHFP  SKTP AKGFVANSFY+GLTATEFFFH
Sbjct: 795  NISQMVACVGQQSVGGRRAPDGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEFFFH 854

Query: 1932 TMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIVQFFYGDDGMDPA 1753
            TMGGREGLVDTAVKTA+TGYMSRRLMK LEDL+V YD TVRN++G IVQF YGDDGMDPA
Sbjct: 855  TMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGDDGMDPA 914

Query: 1752 QMEGAEGFPLDFERLRFKVEATCPAGRDMKLSLAEMSEIINKRLSDYDTST--GCSDAXX 1579
            +MEG +G PL+ ++L  KV ATCP      LS  ++ +++  +L+ + TS+  GCS+   
Sbjct: 915  KMEGKDGTPLNLDQLFMKVTATCPHRGLDTLSPDDIKQMLEDKLTQHKTSSDGGCSEEFK 974

Query: 1578 XXXXXXXXXXXKR-KCY----------------------------VSEQQLKVFLDACIT 1486
                       +  KC                             +S +QL+VFLD C +
Sbjct: 975  ECLKKFLEERIQLLKCTRKALHLDEKHVGKNDSCIEEIIAANISGISAKQLQVFLDTCFS 1034

Query: 1485 RLRSKXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKKI 1306
            R  SK                GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINA+KKI
Sbjct: 1035 RYNSKAIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKI 1094

Query: 1305 STPIIMAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIKASIIVKLDMEKINAS 1126
            STPII  +L     +  A+ VKG +EK +LG+VA +IK+V+ S + +++VKLDM+ I A 
Sbjct: 1095 STPIITTELLSRKDVLSARIVKGAMEKAVLGEVASAIKIVLKSSQPNLVVKLDMQLIEAL 1154

Query: 1125 RLCINAYIVKERIENSLTKARRKNDKLNVKVLDDVKLAVTP-DADRHDAHFALHRLKNKL 949
             + I+A  V+  I N   K + K++  +V+V+D  KL + P   D+      LH LK  L
Sbjct: 1155 HMGISADSVQLSILNH-PKIKLKSE--HVRVIDRAKLRIYPAGTDKSKLQLELHNLKAML 1211

Query: 948  PTVVVKGVDTIERAIIAD--EEGKKGKLNLIVEGTGLREVMGILGIDGRKTESNHIIEVQ 775
            P V+VKG+ T+ER +I +  +EGK  K NL+VEGT L  VMG  G+D R T+SNHI+E+ 
Sbjct: 1212 PKVIVKGIPTVERVVIDERKKEGKLEKYNLLVEGTNLLAVMGTPGVDARNTKSNHIMEMN 1271

Query: 774  QTLGIEAARSCIIREIKKVMQSHSMDVDIRHMMLLADVMTFKGEVLAVTRVGIAKMKESI 595
             TLGIEAAR  II EI+  M+SH M++D+RHMMLLAD+MT+KGEVL +TR GIAKMK S+
Sbjct: 1272 STLGIEAARRSIIDEIQYTMKSHGMNIDVRHMMLLADLMTYKGEVLGITRYGIAKMKTSV 1331

Query: 594  LMLASFEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGILKIRQRRTDSLPALKY 415
            LMLASFEKT++HLFN S +GRE++IEGVSECIIMG+PMQ+GTGILK+RQ R D LP LKY
Sbjct: 1332 LMLASFEKTSEHLFNASYSGREDEIEGVSECIIMGIPMQLGTGILKVRQ-RLDHLPELKY 1390

Query: 414  ASEPIFA 394
              +PI +
Sbjct: 1391 QPDPILS 1397


>ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutrema salsugineum]
            gi|557101978|gb|ESQ42341.1| hypothetical protein
            EUTSA_v10012446mg [Eutrema salsugineum]
          Length = 1375

 Score =  708 bits (1828), Expect = 0.0
 Identities = 376/650 (57%), Positives = 466/650 (71%), Gaps = 17/650 (2%)
 Frame = -2

Query: 2292 FNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPLIMSQCGSKGSPI 2113
            FNEG+L L  G D A++LE+ IT  LN IRE  GK+CM+ LHWRNSPLIMSQCGSKGSPI
Sbjct: 731  FNEGRLQLKAGLDTAKSLESDITGILNRIREATGKLCMEGLHWRNSPLIMSQCGSKGSPI 790

Query: 2112 NISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSFYSGLTATEFFFH 1933
            NISQMVACVGQQ V G RAPDGFIDRSLPHFP+ SKTPEAKGFVANSFYSGLTATEFFFH
Sbjct: 791  NISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKTPEAKGFVANSFYSGLTATEFFFH 850

Query: 1932 TMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIVQFFYGDDGMDPA 1753
            TMGGREGLVDTAVKTA TGYMSRRLMK LEDL VHYD TVRN++G I+QF YGDDGMDP 
Sbjct: 851  TMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQFTYGDDGMDPV 910

Query: 1752 QMEGAEGFPLDFERLRFKVEATC-PAGRDMKLSLAEMSEIINKRLSDYDTSTGCSDAXXX 1576
             MEG +G PL+F+RL  K++ATC P      LS  E+ +   + L  +DTS  C+DA   
Sbjct: 911  LMEGKDGAPLNFDRLFLKIQATCPPRSHHSFLSSEELLQKFEEELVRHDTSRVCTDAFVK 970

Query: 1575 XXXXXXXXXXKRKCY----------VSEQQLKVFLDACITRLRSKXXXXXXXXXXXXXXX 1426
                       R             V+++Q++VF+  C++R R K               
Sbjct: 971  SLREFLSLLGLRSTSPSQVFYKASGVTDKQIEVFVKICVSRYREKTIEAGTAIGTIGAQS 1030

Query: 1425 XGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKKISTPIIMAKLEDDSRMDIAQT 1246
             GEPGTQMTLKTFHFAGVASMN+T GVPRI EIINASK ISTP+I A+LE+   +  A+ 
Sbjct: 1031 IGEPGTQMTLKTFHFAGVASMNITQGVPRINEIINASKNISTPVISAELENPLELTSARW 1090

Query: 1245 VKGQIEKTLLGQVAKSIKLVMTSIKASIIVKLDMEKINASRLCINAYIVKERIENSLTKA 1066
            VKG+IEKT LGQVA+SI+++MTS  AS+ + LD ++I  + L I+ + VK  I   L   
Sbjct: 1091 VKGRIEKTTLGQVAESIEVLMTSTSASVRIILDNKRIEEACLSISPWSVKTSI---LKTP 1147

Query: 1065 RRKNDKLNVKVLDDVKLAVTPDADRHDAHFALHRLKNKLPTVVVKGVDTIERAIIADEEG 886
            R K +  N+++LD   L +TP  D+   HF LH LKN LP ++V G+ T+ER ++A++  
Sbjct: 1148 RIKLNDDNIRILDS-GLDITPVGDKSGIHFGLHNLKNVLPNIIVNGIKTVERVVVAEDTD 1206

Query: 885  KKGKLN------LIVEGTGLREVMGILGIDGRKTESNHIIEVQQTLGIEAARSCIIREIK 724
            KK +++      L VEGT L  VMG  GI+GR T SN+I+EV +TLGIEAAR+ II EI 
Sbjct: 1207 KKKQIDGKKRWKLFVEGTNLLAVMGTPGINGRTTTSNNIVEVSKTLGIEAARTTIIDEIG 1266

Query: 723  KVMQSHSMDVDIRHMMLLADVMTFKGEVLAVTRVGIAKMKESILMLASFEKTADHLFNGS 544
             VM +H M +DIRHMMLLADVMT++GEVL + R GI KM +S+LM ASFE+T DHLF+ +
Sbjct: 1267 SVMGNHGMSIDIRHMMLLADVMTYRGEVLGIQRTGIQKMDKSVLMQASFERTGDHLFSAA 1326

Query: 543  VNGREEKIEGVSECIIMGVPMQIGTGILKIRQRRTDSLPALKYASEPIFA 394
            V+G+ + IEGV+EC+IMG+PM++GTGILK+ Q RTD LP LKY ++PI +
Sbjct: 1327 VSGKVDNIEGVTECVIMGIPMKLGTGILKVLQ-RTDDLPKLKYGADPIIS 1375


>ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Selaginella moellendorffii]
            gi|300146624|gb|EFJ13293.1| hypothetical protein
            SELMODRAFT_446351 [Selaginella moellendorffii]
          Length = 1393

 Score =  707 bits (1824), Expect = 0.0
 Identities = 378/658 (57%), Positives = 466/658 (70%), Gaps = 25/658 (3%)
 Frame = -2

Query: 2292 FNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPLIMSQCGSKGSPI 2113
            FN+G+LTL PGCDAAQTLE++IT +LN+IRE AG+VC+ ELHWRNSPLIMSQCGSKGS I
Sbjct: 740  FNKGQLTLQPGCDAAQTLESEITGELNKIREAAGQVCVNELHWRNSPLIMSQCGSKGSVI 799

Query: 2112 NISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSFYSGLTATEFFFH 1933
            NISQM+ACVGQQ+V G RAP+GFI+RSLPHFP+  KTP+AKGFVANSFYSGLTATEF FH
Sbjct: 800  NISQMIACVGQQSVSGHRAPNGFIERSLPHFPRNDKTPQAKGFVANSFYSGLTATEFIFH 859

Query: 1932 TMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIVQFFYGDDGMDPA 1753
            TMGGREGLVDTAVKTA+TGYMSRRLMK LEDL+  YD TVRNS+G IVQ  YGDD MDP 
Sbjct: 860  TMGGREGLVDTAVKTAETGYMSRRLMKALEDLSCQYDGTVRNSSGVIVQLIYGDDSMDPV 919

Query: 1752 QMEGAEGFPLDFERLRFKVEATCPAGRDMKLSLAEMSEIINKRLSD--YDTSTGCSDAXX 1579
             MEG  G PL+ +R+  K +ATCP G    L  +E+ +I+  + S    + ST   D+  
Sbjct: 920  SMEGQNGTPLNLDRVLMKAKATCPRGTTPALPPSELWKIVESKFSQDGSECSTAFLDSLR 979

Query: 1578 XXXXXXXXXXXKRKCYVS----------------------EQQLKVFLDACITRLRSKXX 1465
                         +  +S                       +QL+VFL+ CI R   K  
Sbjct: 980  KFLRKEFDTISSTRKRLSLPLDDFGNVDDENVAANVSGLTSRQLEVFLNTCIGRYHRKKL 1039

Query: 1464 XXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKKISTPIIMA 1285
                          GEPGTQMTLKTFHFAGVASMN+TLGVPRIKEIINASKKISTPII A
Sbjct: 1040 DPGTAVGAIGAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKKISTPIITA 1099

Query: 1284 KLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIKASIIVKLDMEKINASRLCINAY 1105
            KL  ++ +  A+ VKG+IEKT LG VAKSIK+V+   +A + +KLDM++I + +L I A 
Sbjct: 1100 KLVSENDVKAARIVKGRIEKTALGDVAKSIKIVLRPGQAFVSIKLDMDRIYSLQLDIRAE 1159

Query: 1104 IVKERIENSLTKARRKNDKLNVKVLDDVKLAVT-PDADRHDAHFALHRLKNKLPTVVVKG 928
             V E +         K  + +VKV DD  +++T P++DR    FALH L+N LP V+VKG
Sbjct: 1160 TVAEAVLKFPKIKSMKLKEQHVKVNDDRSISLTTPESDRKKMLFALHSLQNMLPKVIVKG 1219

Query: 927  VDTIERAIIADEEGKKGKLNLIVEGTGLREVMGILGIDGRKTESNHIIEVQQTLGIEAAR 748
            + T+ERA+I  E   KGK NL+VEGT L+ VMG  G+DGR+T SNHI E  + LGIEAAR
Sbjct: 1220 IPTVERAVINQE---KGKYNLLVEGTNLKAVMGTEGVDGRETTSNHIFETVEVLGIEAAR 1276

Query: 747  SCIIREIKKVMQSHSMDVDIRHMMLLADVMTFKGEVLAVTRVGIAKMKESILMLASFEKT 568
            + II+EI+  M SH M +D RHMMLLADVMT++GE+L +TR G+AKMK+S+LMLASFEKT
Sbjct: 1277 NGIIKEIQYTMGSHGMSIDQRHMMLLADVMTYRGEILGITRFGMAKMKDSVLMLASFEKT 1336

Query: 567  ADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGILKIRQRRTDSLPALKYASEPIFA 394
             DHLF  SV+GR ++IEGVSECIIMG+PM +GTG+ K+RQ +   +P L Y   P+F+
Sbjct: 1337 TDHLFAASVHGRTDQIEGVSECIIMGIPMPLGTGLFKVRQ-KVGRIPKLIYGPPPLFS 1393


>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
            brachyantha]
          Length = 1389

 Score =  706 bits (1821), Expect = 0.0
 Identities = 391/681 (57%), Positives = 475/681 (69%), Gaps = 48/681 (7%)
 Frame = -2

Query: 2292 FNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPLIMSQCGSKGSPI 2113
            F++G LTL PGC+AAQTLE KIT  LN+IRE AG +CM  LHWRNSPLIMSQCGSKGSPI
Sbjct: 716  FSKGALTLQPGCNAAQTLEHKITHVLNKIREAAGNICMDTLHWRNSPLIMSQCGSKGSPI 775

Query: 2112 NISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSFYSGLTATEFFFH 1933
            NISQMV CVGQQ+VGG RAP+GFIDR+LPHFP  SKTP AKGFVANSFY+GLTATEFFFH
Sbjct: 776  NISQMVVCVGQQSVGGHRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYNGLTATEFFFH 835

Query: 1932 TMGG-----------------REGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNS 1804
            TMGG                 REGLVDTAVKTA+TGYMSRRLMK LEDL+V YD TVRN+
Sbjct: 836  TMGGIYIVLPATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNA 895

Query: 1803 NGTIVQFFYGDDGMDPAQMEGAEGFPLDFERLRFKVEATCPAGRDMKLSLAEMSEIINKR 1624
            +G IVQF YGDDGMDPA+MEG +G PL+ ++L  KV ATCP      LS  E+ +I+N +
Sbjct: 896  SGGIVQFLYGDDGMDPAKMEGEDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQILNDK 955

Query: 1623 LSDYDTST--GCSDAXXXXXXXXXXXXXK-----RKCY---------------------- 1531
            LS++D S+  GCS+              K     R+                        
Sbjct: 956  LSEHDASSDDGCSEKFKQLLKDFLEDRIKLLKSTRRALCLDENHVGKDSSIEESIAANIS 1015

Query: 1530 -VSEQQLKVFLDACITRLRSKXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVT 1354
             +S +QL+VFLD C++R  SK                GEPGTQMTLKTFHFAGVASMNVT
Sbjct: 1016 GISAKQLQVFLDTCLSRYHSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVT 1075

Query: 1353 LGVPRIKEIINASKKISTPIIMAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSI 1174
            LGVPRIKEIINA+KKISTPII A+L     +  A+ VKG +EK +LG+VA+ IK+V+ S 
Sbjct: 1076 LGVPRIKEIINAAKKISTPIITAELLSGKDVLSARVVKGSMEKAVLGEVAEDIKIVLKSS 1135

Query: 1173 KASIIVKLDMEKINASRLCINAYIVKERIENSLTKARRKNDKLNVKVLDDVKLAVTPDA- 997
            + +++VKLDM++I    + I+A  V+  I   L   R K    +V+V+D  KL V P A 
Sbjct: 1136 QPNLVVKLDMQRIEDLHMGISADSVQLSI---LNHPRIKLKSEHVRVIDKAKLRVYPTAI 1192

Query: 996  DRHDAHFALHRLKNKLPTVVVKGVDTIERAIIADEEGKKGKLNLIVEGTGLREVMGILGI 817
            D+    + LH LK+ LP V+VKG+ T+ERA+I+    K    +L+VEGT L  VMG  G+
Sbjct: 1193 DKSKLLYELHNLKSMLPKVIVKGIPTVERAVISQTGDK---YSLLVEGTNLLAVMGTPGV 1249

Query: 816  DGRKTESNHIIEVQQTLGIEAARSCIIREIKKVMQSHSMDVDIRHMMLLADVMTFKGEVL 637
            D  KT+SNHI+EV +TLGIEAAR  II EI+  M SH M++D RHMMLLAD+MT+KGE+L
Sbjct: 1250 DAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMTSHGMNIDSRHMMLLADLMTYKGEIL 1309

Query: 636  AVTRVGIAKMKESILMLASFEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGILK 457
             +TR GIAKMK S+LMLASFEKTA+HLFN S +GRE++IEGVSECIIMG+PMQ+GTGILK
Sbjct: 1310 GITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILK 1369

Query: 456  IRQRRTDSLPALKYASEPIFA 394
            +RQ R D LP  KY  +PI A
Sbjct: 1370 VRQ-RLDHLPEFKYQPDPILA 1389


>gb|ESW04135.1| hypothetical protein PHAVU_011G070100g [Phaseolus vulgaris]
          Length = 1392

 Score =  702 bits (1811), Expect = 0.0
 Identities = 384/667 (57%), Positives = 475/667 (71%), Gaps = 34/667 (5%)
 Frame = -2

Query: 2292 FNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPLIMSQCGSKGSPI 2113
            FN+GKL L+ GCDA QTLE +IT  LN +R++AGKVCM+ LHWRNSPLIMSQCGSKGSPI
Sbjct: 731  FNKGKLELLAGCDAPQTLETQITGVLNGLRDMAGKVCMQTLHWRNSPLIMSQCGSKGSPI 790

Query: 2112 NISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSFYSGLTATEFFFH 1933
            NISQMVACVGQQ+VGGRRAP+GF+DRSLPHFP  +KTP AKGFVANSFYSGL+ATEFFFH
Sbjct: 791  NISQMVACVGQQSVGGRRAPNGFLDRSLPHFPLNAKTPAAKGFVANSFYSGLSATEFFFH 850

Query: 1932 TMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIVQFFYGDDGMDPA 1753
            TMGGREGLVDTAVKTADTGYMSR+LMK +EDL +HYD TVRN+ G+IVQF YGDDGMDP 
Sbjct: 851  TMGGREGLVDTAVKTADTGYMSRQLMKSMEDLFLHYDYTVRNAGGSIVQFCYGDDGMDPG 910

Query: 1752 QMEGAEGFPLDFERLRFKVEATCPAGRDMK-LSLAEMSEIINKRLSDY------------ 1612
             MEG  G PL+FERL  K +A CP   D + LS +++ +++ ++LS++            
Sbjct: 911  GMEGKNGKPLNFERLFLKSKAICPNKDDDEVLSSSDVCKVVQEKLSEFGVSREVEKGVLE 970

Query: 1611 ----------------DTSTGCSDAXXXXXXXXXXXXXKRKCYVSEQQLKVFLDACITRL 1480
                            D +    +              +R   ++  QL+VFL+ C++R 
Sbjct: 971  VGFSADFVQSLQSFIKDNTKLTEETFTDDNSQILKKFGERISGITRAQLEVFLNICLSRY 1030

Query: 1479 RSKXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKKIST 1300
             SK                GEPGTQMTLKTFHFAGVASMNVTLGVPR+KEI+N +KKIST
Sbjct: 1031 HSKKIEAGAPVGATGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRVKEIMNGNKKIST 1090

Query: 1299 PIIMAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIKASIIVKLDMEKINASRL 1120
            PII A LE     + A+ VKG+IEKT LGQVAKSIK+V+TS  AS+++ LDME+I  + L
Sbjct: 1091 PIITAILERTDCANTARIVKGRIEKTNLGQVAKSIKVVVTSRLASVVITLDMERIQDAHL 1150

Query: 1119 CINAYIVKERIENSLTKARRKNDKLNVKVLDDVKLAVTP-DADRHDAHFALHRLKNKLPT 943
             I+A IVKE I  +  KA+ K +  ++K+LD  KL V P D DR   HF L+ LKN LP+
Sbjct: 1151 NIDANIVKESILQT-KKAKLKPE--HIKILDVKKLRVVPQDGDRSKLHFQLNYLKNLLPS 1207

Query: 942  VVVKGVDTIERAIIADEEG---KKGKLNLIVEGTGLREVMGILGIDGRKTESNHIIEVQQ 772
            VVVKG+ T +R +I+ EE    K  K  L+VEGTG REVMG+ G+DG KT SNHI EV+ 
Sbjct: 1208 VVVKGIKTADRVVISKEEDKITKAEKFKLLVEGTGFREVMGVEGVDGCKTVSNHIHEVRD 1267

Query: 771  TLGIEAARSCIIREIKKVM-QSHSMDVDIRHMMLLADVMTFKGEVLAVTRVGIAKMKESI 595
            TLGIEAAR CI++EIK VM  +H M++D RHMMLLADVMT  G +L + R GI+KM +S+
Sbjct: 1268 TLGIEAARECIVKEIKYVMVDTHGMNIDTRHMMLLADVMTATGHILGINRFGISKMGKSV 1327

Query: 594  LMLASFEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGILKIRQRRTDSLPALKY 415
            LMLASFE+TAD LF  SV GR++ I GVSE IIMG+P+ IGTG++K++QR    LP L +
Sbjct: 1328 LMLASFERTADILFQASVRGRDDSIGGVSESIIMGIPITIGTGMIKVKQRL--ELPDLPH 1385

Query: 414  ASEPIFA 394
             + PI +
Sbjct: 1386 GASPILS 1392


>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
            gi|241937900|gb|EES11045.1| hypothetical protein
            SORBIDRAFT_06g021120 [Sorghum bicolor]
          Length = 1391

 Score =  699 bits (1804), Expect = 0.0
 Identities = 382/667 (57%), Positives = 473/667 (70%), Gaps = 34/667 (5%)
 Frame = -2

Query: 2292 FNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPLIMSQCGSKGSPI 2113
            F +G L L PGC+AAQTLE  IT  LNEIR IAG VCM  LHWRNSPLIMSQCGSKGSPI
Sbjct: 729  FAKGALALHPGCNAAQTLEHNITGVLNEIRSIAGNVCMDTLHWRNSPLIMSQCGSKGSPI 788

Query: 2112 NISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSFYSGLTATEFFFH 1933
            NISQMVACVGQQ+VGGRRAPDGF++R+LPHFP  SKTP AKGFVANSFY+GLTATEFFFH
Sbjct: 789  NISQMVACVGQQSVGGRRAPDGFLNRTLPHFPINSKTPAAKGFVANSFYTGLTATEFFFH 848

Query: 1932 TMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIVQFFYGDDGMDPA 1753
            TMGGREGLVDTAVKTA+TGYMSRRLMK LEDL+V YD TVRN++G IVQF YGDDGMDPA
Sbjct: 849  TMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGDDGMDPA 908

Query: 1752 QMEGAEGFPLDFERLRFKVEATCPAGRDMKLSLAEMSEIINKRLSDYDTST--GCSDAXX 1579
            +MEG +G PL+ ++L  KV ATCP      LS   + +++  +L  +DTS+  GCS+   
Sbjct: 909  KMEGKDGMPLNLDQLFMKVMATCPQRGSDTLSPEAIKQMLEDKLLQHDTSSDGGCSEEFK 968

Query: 1578 XXXXXXXXXXXK-RKCY----------------------------VSEQQLKVFLDACIT 1486
                       +  KC                             +S +QL+VFLD C++
Sbjct: 969  KNLTEFLDKRIELMKCTRRALHLHEDHVEKKDSCVEESVAAIISGISAKQLQVFLDTCLS 1028

Query: 1485 RLRSKXXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKKI 1306
            R +SK                GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINA++KI
Sbjct: 1029 RYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAARKI 1088

Query: 1305 STPIIMAKLEDDSRMDIAQTVKGQIEKTLLGQVAKSIKLVMTSIKASIIVKLDMEKINAS 1126
            STPII A+L     +  A+ VKG +EK +LG+VA +I++V+ S + ++IVKLDM+ I + 
Sbjct: 1089 STPIITAQLLSKKDVLSARIVKGSMEKAVLGEVAVAIQIVLKSSQPNLIVKLDMQLIESL 1148

Query: 1125 RLCINAYIVKERIENSLTKARRKNDKLNVKVLDDVKLAVTP-DADRHDAHFALHRLKNKL 949
             + I+A  V+  I N   K + K++  +V+V+D  KL + P   D+      LH LK+ L
Sbjct: 1149 HMGISADSVQLSILNH-PKIKLKSE--HVRVIDRAKLRIYPAGTDKRKLQLELHNLKSIL 1205

Query: 948  PTVVVKGVDTIERAIIADEEGKKG--KLNLIVEGTGLREVMGILGIDGRKTESNHIIEVQ 775
            P V+VKG+ T+ER +I + + K    +  L+VEGT L  VMG  G+D  KT+SNHI+E  
Sbjct: 1206 PKVIVKGIPTVERVVIDEVKVKNETERYQLLVEGTNLLAVMGTPGVDATKTKSNHIMETN 1265

Query: 774  QTLGIEAARSCIIREIKKVMQSHSMDVDIRHMMLLADVMTFKGEVLAVTRVGIAKMKESI 595
            QTLGIEAAR  II EI+  M+SH M++D RHMMLLAD+MT+KGE+L +TR GIAKMK S+
Sbjct: 1266 QTLGIEAARRSIIDEIQYTMKSHGMNIDRRHMMLLADLMTYKGEILGITRYGIAKMKSSV 1325

Query: 594  LMLASFEKTADHLFNGSVNGREEKIEGVSECIIMGVPMQIGTGILKIRQRRTDSLPALKY 415
            LMLASFEKT++HLFN S +GRE++IEGVSECIIMG+PMQ+GTGILK+RQ R D +P  KY
Sbjct: 1326 LMLASFEKTSEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQ-RLDHVPEFKY 1384

Query: 414  ASEPIFA 394
              +PI +
Sbjct: 1385 QPDPILS 1391


>ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arabidopsis lyrata subsp.
            lyrata] gi|297310500|gb|EFH40924.1| hypothetical protein
            ARALYDRAFT_496142 [Arabidopsis lyrata subsp. lyrata]
          Length = 1376

 Score =  697 bits (1800), Expect = 0.0
 Identities = 373/650 (57%), Positives = 460/650 (70%), Gaps = 17/650 (2%)
 Frame = -2

Query: 2292 FNEGKLTLMPGCDAAQTLEAKITQKLNEIREIAGKVCMKELHWRNSPLIMSQCGSKGSPI 2113
            FN G L L  G D A++LEA+IT  LN IRE  GK CM  LHWRNSPLIMSQCGSKGSPI
Sbjct: 732  FNRGNLQLKAGLDGAKSLEAEITGILNTIREATGKACMSGLHWRNSPLIMSQCGSKGSPI 791

Query: 2112 NISQMVACVGQQAVGGRRAPDGFIDRSLPHFPKKSKTPEAKGFVANSFYSGLTATEFFFH 1933
            NISQMVACVGQQ V G RAPDGFIDRSLPHFP+ SK+P AKGFVANSFYSGLTATEFFFH
Sbjct: 792  NISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVANSFYSGLTATEFFFH 851

Query: 1932 TMGGREGLVDTAVKTADTGYMSRRLMKCLEDLAVHYDMTVRNSNGTIVQFFYGDDGMDPA 1753
            TMGGREGLVDTAVKTA TGYMSRRLMK LEDL VHYD TVRN++G I+QF YGDDGMDPA
Sbjct: 852  TMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQFTYGDDGMDPA 911

Query: 1752 QMEGAEGFPLDFERLRFKVEATC-PAGRDMKLSLAEMSEIINKRLSDYDTSTGCSDAXXX 1576
             MEG +G PL+F+RL  K++ATC P      LS  E+S+   + L  +D S  C+DA   
Sbjct: 912  LMEGKDGAPLNFDRLFLKIQATCPPRSHHNYLSSEELSQKFEEELVRHDKSRVCTDAFVK 971

Query: 1575 XXXXXXXXXXKRKCY----------VSEQQLKVFLDACITRLRSKXXXXXXXXXXXXXXX 1426
                       +             V+++QL+VF+  C++R R K               
Sbjct: 972  SLREFVSLLGVKSASTPQVLYKASGVTDKQLEVFVKICVSRYREKKIEAGTAIGTIGAQS 1031

Query: 1425 XGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKKISTPIIMAKLEDDSRMDIAQT 1246
             GEPGTQMTLKTFHFAGVASMN+T GVPRI EIINASK ISTP+I A+LE+   +  A+ 
Sbjct: 1032 IGEPGTQMTLKTFHFAGVASMNITQGVPRINEIINASKNISTPVISAELENPLELTSARW 1091

Query: 1245 VKGQIEKTLLGQVAKSIKLVMTSIKASIIVKLDMEKINASRLCINAYIVKERIENSLTKA 1066
            VKG+IEKT LGQVA+SI+++MTS  AS+ + LD + I  + L I+ + VK  I   L   
Sbjct: 1092 VKGRIEKTTLGQVAESIEVLMTSTSASVRIILDNKIIEEACLSISPWSVKNSI---LKTP 1148

Query: 1065 RRKNDKLNVKVLDDVKLAVTPDADRHDAHFALHRLKNKLPTVVVKGVDTIERAIIADEEG 886
            R K +  +++VL D  L +TP  D+   HF LH LKN LP ++V G+ T+ER ++A++  
Sbjct: 1149 RIKLNDNDIRVL-DTGLDITPVVDKSRTHFNLHNLKNVLPNIIVNGIKTVERVVVAEDMD 1207

Query: 885  K------KGKLNLIVEGTGLREVMGILGIDGRKTESNHIIEVQQTLGIEAARSCIIREIK 724
            K      K +  L VEGT L  VMG  GI+GR T SN+++EV +TLGIEAAR+ II EI 
Sbjct: 1208 KNKQIDGKTRWKLFVEGTNLLAVMGTPGINGRTTTSNNVVEVSKTLGIEAARTTIIDEIG 1267

Query: 723  KVMQSHSMDVDIRHMMLLADVMTFKGEVLAVTRVGIAKMKESILMLASFEKTADHLFNGS 544
             VM +H M +DIRHMMLLADVMT++GEVL + R GI KM +S+LM ASFE+T DHLF+ +
Sbjct: 1268 TVMGNHGMSIDIRHMMLLADVMTYRGEVLGIQRTGIQKMDKSVLMQASFERTGDHLFSAA 1327

Query: 543  VNGREEKIEGVSECIIMGVPMQIGTGILKIRQRRTDSLPALKYASEPIFA 394
            ++G+ + IEGV+EC+IMG+PM++GTGILK+ Q RTD LP LKY ++PI +
Sbjct: 1328 ISGKVDNIEGVTECVIMGIPMKLGTGILKVLQ-RTDDLPKLKYGADPIIS 1376