BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00015016
         (1614 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX19931.1| viral replicase [Nandina mosaic virus]                1014   0.0  
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1011   0.0  
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1009   0.0  
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1008   0.0  
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1008   0.0  
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1008   0.0  
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1008   0.0  
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1006   0.0  
gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago a...  1003   0.0  
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1...   993   0.0  
ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi...   889   0.0  
gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]             773   0.0  
ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|5...   769   0.0  
ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mo...   737   0.0  
ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|A...   693   0.0  
ref|NP_077079.1| replicase [Clover yellow mosaic virus]               687   0.0  
ref|YP_004849314.1| replicase [Tamus red mosaic virus] gi|345548...   680   0.0  
gb|AFM77886.1| replicase [Hosta virus X]                              680   0.0  
ref|YP_002308464.1| replicase [Hosta virus X] gi|58415284|emb|CA...   680   0.0  
gb|ACS28233.1| replicase [Alternanthera mosaic virus]                 664   0.0  

>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
          Length = 1368

 Score = 1014 bits (2622), Expect = 0.0
 Identities = 496/537 (92%), Positives = 510/537 (94%)
 Frame = -3

Query: 1612 LSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGH 1433
            LSRYYINATHRNSKFLANKLG+YSSN CPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGH
Sbjct: 769  LSRYYINATHRNSKFLANKLGIYSSNHCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGH 828

Query: 1432 KVSTYAGCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLE 1253
            KVSTYAGCQGITAP+VQILLDNDTTMCTKEVLYTALSRAVDS HFVNSNAQSSAFWEKLE
Sbjct: 829  KVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSNHFVNSNAQSSAFWEKLE 888

Query: 1252 ATPYLKTFLSLVREDKIAEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFERE 1073
            ATPYLKTFLSLVREDKI EFS                PVE+ TT LDDF+E L DKF+RE
Sbjct: 889  ATPYLKTFLSLVREDKIEEFSAPPDPPKSVMPPVTHFPVEECTTALDDFREELHDKFDRE 948

Query: 1072 IFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLG 893
            IFTEAHGHTNCVQ DDPTTQLFSHQQAKDEALLWETIKARLTISTPEAN+EEFRAKKDLG
Sbjct: 949  IFTEAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDLG 1008

Query: 892  DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 713
            DILW NYHKAM LPKEQP+FSE+LWTRCAEEVQNTYLKKS++Q+KGGERRQSPDFHEHQI
Sbjct: 1009 DILWTNYHKAMNLPKEQPDFSEELWTRCAEEVQNTYLKKSLNQLKGGERRQSPDFHEHQI 1068

Query: 712  LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 533
            LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC
Sbjct: 1069 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 1128

Query: 532  EKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD 353
            EKTPQDLSRWVL+YWDFSKP+YANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD
Sbjct: 1129 EKTPQDLSRWVLSYWDFSKPAYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD 1188

Query: 352  IKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVC 173
            IKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRF IPEGTAQIYAGDDCAIAQVC
Sbjct: 1189 IKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFNIPEGTAQIYAGDDCAIAQVC 1248

Query: 172  PEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 2
            PEKPSFALLK+RIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK
Sbjct: 1249 PEKPSFALLKDRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1305


>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1011 bits (2615), Expect = 0.0
 Identities = 496/537 (92%), Positives = 506/537 (94%)
 Frame = -3

Query: 1612 LSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGH 1433
            LSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGH
Sbjct: 781  LSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGH 840

Query: 1432 KVSTYAGCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLE 1253
            KVSTYAGCQGITAP+VQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLE
Sbjct: 841  KVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLE 900

Query: 1252 ATPYLKTFLSLVREDKIAEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFERE 1073
            ATPYLKTFLSLVREDKI EF+                PVED TTTLDDFKE L DKF+RE
Sbjct: 901  ATPYLKTFLSLVREDKIEEFTAIPAEAKHVAPPCTHFPVEDGTTTLDDFKEELRDKFDRE 960

Query: 1072 IFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLG 893
            IF  AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEANL EFRAKKDLG
Sbjct: 961  IFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDLG 1020

Query: 892  DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 713
            DILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS+SQIKGGERRQSPDFHEHQI
Sbjct: 1021 DILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQI 1080

Query: 712  LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 533
            LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINC
Sbjct: 1081 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINC 1140

Query: 532  EKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD 353
            EKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD
Sbjct: 1141 EKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD 1200

Query: 352  IKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVC 173
            IKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVC
Sbjct: 1201 IKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVC 1260

Query: 172  PEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 2
            PEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK
Sbjct: 1261 PEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1317


>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1009 bits (2608), Expect = 0.0
 Identities = 495/537 (92%), Positives = 505/537 (94%)
 Frame = -3

Query: 1612 LSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGH 1433
            LSRYYINATHRNSKFLANKLGVYSSN CPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGH
Sbjct: 781  LSRYYINATHRNSKFLANKLGVYSSNPCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGH 840

Query: 1432 KVSTYAGCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLE 1253
            KVSTYAGCQGITAP+VQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLE
Sbjct: 841  KVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLE 900

Query: 1252 ATPYLKTFLSLVREDKIAEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFERE 1073
            ATPYLKTFLSLVREDKI EF+                PVED TTTLDDFKE L DKF+RE
Sbjct: 901  ATPYLKTFLSLVREDKIEEFTATTAEAKPVAPPCTHFPVEDGTTTLDDFKEELHDKFDRE 960

Query: 1072 IFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLG 893
            IF   HGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLTIS PEANL EFRAKKDLG
Sbjct: 961  IFNPTHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTISNPEANLAEFRAKKDLG 1020

Query: 892  DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 713
            DILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS++QIKGGERRQSPDFHEHQI
Sbjct: 1021 DILWENYRKAMKLPNEQPDFSEDLWIRCAEEVQNTYLKKSVAQIKGGERRQSPDFHEHQI 1080

Query: 712  LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 533
            LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFR+ALSPNNIMINC
Sbjct: 1081 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFREALSPNNIMINC 1140

Query: 532  EKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD 353
            EKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD
Sbjct: 1141 EKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD 1200

Query: 352  IKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVC 173
            IKLSPKIFLGTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVC
Sbjct: 1201 IKLSPKIFLGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVC 1260

Query: 172  PEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 2
            PEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK
Sbjct: 1261 PEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1317


>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1008 bits (2606), Expect = 0.0
 Identities = 494/537 (91%), Positives = 505/537 (94%)
 Frame = -3

Query: 1612 LSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGH 1433
            LSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQP+PGLHLLVPSLVKKAAFTDAGH
Sbjct: 781  LSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPRPGLHLLVPSLVKKAAFTDAGH 840

Query: 1432 KVSTYAGCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLE 1253
            KVSTYAGCQGITAP+VQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLE
Sbjct: 841  KVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLE 900

Query: 1252 ATPYLKTFLSLVREDKIAEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFERE 1073
            ATPYLKTFLSLVREDKI EF+                PVED TTTLDDFKE L DKF+RE
Sbjct: 901  ATPYLKTFLSLVREDKIEEFTAIPAEAKHVAPPCTHFPVEDGTTTLDDFKEELRDKFDRE 960

Query: 1072 IFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLG 893
            IF  AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEANL EFRAKKDLG
Sbjct: 961  IFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDLG 1020

Query: 892  DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 713
            DILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS+SQIKGGERRQSPDFHEHQI
Sbjct: 1021 DILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQI 1080

Query: 712  LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 533
            LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINC
Sbjct: 1081 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINC 1140

Query: 532  EKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD 353
            EKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD
Sbjct: 1141 EKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD 1200

Query: 352  IKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVC 173
            IKLSPKIF+GTL+IMRLTGEGP FDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVC
Sbjct: 1201 IKLSPKIFMGTLTIMRLTGEGPAFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVC 1260

Query: 172  PEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 2
            PEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK
Sbjct: 1261 PEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1317


>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1008 bits (2606), Expect = 0.0
 Identities = 495/537 (92%), Positives = 505/537 (94%)
 Frame = -3

Query: 1612 LSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGH 1433
            LSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGH
Sbjct: 781  LSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGH 840

Query: 1432 KVSTYAGCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLE 1253
            KVSTYAGCQGITAP+VQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLE
Sbjct: 841  KVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLE 900

Query: 1252 ATPYLKTFLSLVREDKIAEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFERE 1073
            ATPYLKTFLSLVREDKI EF+                PVED TTTLDDFKE L DKF+RE
Sbjct: 901  ATPYLKTFLSLVREDKIEEFTAIPAEAKRVAPPCTHFPVEDGTTTLDDFKEELRDKFDRE 960

Query: 1072 IFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLG 893
            IF  AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEANL EFRAKKDLG
Sbjct: 961  IFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDLG 1020

Query: 892  DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 713
            DILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS+SQIKGGERRQSPDFHEHQI
Sbjct: 1021 DILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQI 1080

Query: 712  LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 533
            LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINC
Sbjct: 1081 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINC 1140

Query: 532  EKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD 353
            EKTPQDLSRWVLN WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD
Sbjct: 1141 EKTPQDLSRWVLNCWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD 1200

Query: 352  IKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVC 173
            IKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVC
Sbjct: 1201 IKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVC 1260

Query: 172  PEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 2
            PEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK
Sbjct: 1261 PEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1317


>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1008 bits (2606), Expect = 0.0
 Identities = 495/537 (92%), Positives = 505/537 (94%)
 Frame = -3

Query: 1612 LSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGH 1433
            LSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGH
Sbjct: 781  LSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGH 840

Query: 1432 KVSTYAGCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLE 1253
            KVSTYAGCQGITAP+VQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLE
Sbjct: 841  KVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLE 900

Query: 1252 ATPYLKTFLSLVREDKIAEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFERE 1073
            ATPYLKTFLSLVREDKI EF+                PVED TTTLDDFKE L DKF+RE
Sbjct: 901  ATPYLKTFLSLVREDKIEEFTAIPAEAKRVAPPCTHFPVEDGTTTLDDFKEELRDKFDRE 960

Query: 1072 IFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLG 893
            IF  AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEANL EFRAKKDLG
Sbjct: 961  IFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDLG 1020

Query: 892  DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 713
            DILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS+SQIKGGERRQSPDFHEHQI
Sbjct: 1021 DILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQI 1080

Query: 712  LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 533
            LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINC
Sbjct: 1081 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINC 1140

Query: 532  EKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD 353
            EKTPQDLSRWVLN WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD
Sbjct: 1141 EKTPQDLSRWVLNCWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD 1200

Query: 352  IKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVC 173
            IKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVC
Sbjct: 1201 IKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVC 1260

Query: 172  PEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 2
            PEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK
Sbjct: 1261 PEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1317


>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1008 bits (2606), Expect = 0.0
 Identities = 495/537 (92%), Positives = 505/537 (94%)
 Frame = -3

Query: 1612 LSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGH 1433
            LSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGH
Sbjct: 781  LSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGH 840

Query: 1432 KVSTYAGCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLE 1253
            KVSTYAGCQGITAP+VQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLE
Sbjct: 841  KVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLE 900

Query: 1252 ATPYLKTFLSLVREDKIAEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFERE 1073
            ATPYLKTFLSLVREDKI EF+                PVED TTTLDDFKE L DKF+RE
Sbjct: 901  ATPYLKTFLSLVREDKIEEFTAIPAEAKRVAPPCTHFPVEDGTTTLDDFKEELRDKFDRE 960

Query: 1072 IFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLG 893
            IF  AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEANL EFRAKKDLG
Sbjct: 961  IFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDLG 1020

Query: 892  DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 713
            DILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS+SQIKGGERRQSPDFHEHQI
Sbjct: 1021 DILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQI 1080

Query: 712  LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 533
            LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINC
Sbjct: 1081 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINC 1140

Query: 532  EKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD 353
            EKTPQDLSRWVLN WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD
Sbjct: 1141 EKTPQDLSRWVLNCWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD 1200

Query: 352  IKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVC 173
            IKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVC
Sbjct: 1201 IKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVC 1260

Query: 172  PEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 2
            PEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK
Sbjct: 1261 PEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1317


>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1006 bits (2601), Expect = 0.0
 Identities = 493/537 (91%), Positives = 504/537 (93%)
 Frame = -3

Query: 1612 LSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGH 1433
            LSRYYINATHRNSK LANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGH
Sbjct: 781  LSRYYINATHRNSKLLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGH 840

Query: 1432 KVSTYAGCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLE 1253
            KVSTYAGCQGITAP+VQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLE
Sbjct: 841  KVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLE 900

Query: 1252 ATPYLKTFLSLVREDKIAEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFERE 1073
            ATPYLKTFLSLVREDKI EF+                PVED TTTLDDFKE L DKF+RE
Sbjct: 901  ATPYLKTFLSLVREDKIEEFTAIPAEAKHVAPPCTHFPVEDGTTTLDDFKEELRDKFDRE 960

Query: 1072 IFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLG 893
            IF  AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEANL EFRAKKDLG
Sbjct: 961  IFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDLG 1020

Query: 892  DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 713
            DILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS+SQIKGGERRQSPDFHEH I
Sbjct: 1021 DILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHHI 1080

Query: 712  LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 533
            LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINC
Sbjct: 1081 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINC 1140

Query: 532  EKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD 353
            E+TPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD
Sbjct: 1141 ERTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD 1200

Query: 352  IKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVC 173
            IKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVC
Sbjct: 1201 IKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVC 1260

Query: 172  PEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 2
            PEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK
Sbjct: 1261 PEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1317


>gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
            virus]
          Length = 711

 Score = 1003 bits (2592), Expect = 0.0
 Identities = 488/537 (90%), Positives = 508/537 (94%)
 Frame = -3

Query: 1612 LSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGH 1433
            LSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYG QPQPGLHLLVPSL+KKAAFTDAGH
Sbjct: 112  LSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLMKKAAFTDAGH 171

Query: 1432 KVSTYAGCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLE 1253
            KVSTYAGCQGITAP+VQILLDNDTTMCTKEVLYTALSRAVDSIHF+NSNAQSSAFWEKLE
Sbjct: 172  KVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFINSNAQSSAFWEKLE 231

Query: 1252 ATPYLKTFLSLVREDKIAEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFERE 1073
            ATPYLKTFLSLVRED++AEFS                PVED TTTLDDF+E L DKF+RE
Sbjct: 232  ATPYLKTFLSLVREDRVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREELQDKFDRE 291

Query: 1072 IFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLG 893
            IF +AHGHTNCVQ D+PTTQLF+HQQAKDEALLWETI ARLTIS+PEANL EFRAKKDLG
Sbjct: 292  IFNQAHGHTNCVQTDNPTTQLFAHQQAKDEALLWETINARLTISSPEANLAEFRAKKDLG 351

Query: 892  DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 713
            DILW NY KAMKLP EQP+FSEDLWTRCAEEVQNTYLKKS++QIKGG+RRQSPDFHEHQI
Sbjct: 352  DILWENYRKAMKLPNEQPDFSEDLWTRCAEEVQNTYLKKSVAQIKGGDRRQSPDFHEHQI 411

Query: 712  LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 533
            LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINC
Sbjct: 412  LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINC 471

Query: 532  EKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD 353
            EKTPQDLSRWVLN+WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD
Sbjct: 472  EKTPQDLSRWVLNHWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD 531

Query: 352  IKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVC 173
            IKLSPKIFLGTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEG AQIYAGDDCAI+QVC
Sbjct: 532  IKLSPKIFLGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGAAQIYAGDDCAISQVC 591

Query: 172  PEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 2
            PEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK
Sbjct: 592  PEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 648


>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
            gi|1173174|sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA
            replication protein; AltName: Full=156 kDa protein;
            AltName: Full=ORF1 protein; Includes: RecName:
            Full=RNA-directed RNA polymerase; Includes: RecName:
            Full=Helicase gi|311645|emb|CAA79761.1| 156K-protein
            [Plantago asiatica mosaic virus]
          Length = 1385

 Score =  993 bits (2567), Expect = 0.0
 Identities = 486/536 (90%), Positives = 502/536 (93%)
 Frame = -3

Query: 1609 SRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHK 1430
            SRYYINAT RNSKFLANKLGVYS+NSCPL VTYGFQP PGLHLLVPSL+KKAAFTDAGHK
Sbjct: 787  SRYYINATLRNSKFLANKLGVYSANSCPLNVTYGFQPLPGLHLLVPSLMKKAAFTDAGHK 846

Query: 1429 VSTYAGCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEA 1250
            VS+YAGCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVN+NAQSSAFWEKLEA
Sbjct: 847  VSSYAGCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNTNAQSSAFWEKLEA 906

Query: 1249 TPYLKTFLSLVREDKIAEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREI 1070
            TPYLKTFLSLVREDKI EF                 PVE+  TTLDDFKE L DKF+REI
Sbjct: 907  TPYLKTFLSLVREDKITEFQAPADAPKPVTPPVTHFPVEEPATTLDDFKEELRDKFDREI 966

Query: 1069 FTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGD 890
            FT   GHTNCVQ DDPTTQLFSHQQAKDEALLWE I+ARL ISTPEAN+EEFRAKKDLGD
Sbjct: 967  FTSDRGHTNCVQTDDPTTQLFSHQQAKDEALLWEMIRARLKISTPEANIEEFRAKKDLGD 1026

Query: 889  ILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQIL 710
            ILW NYH+AM LPKEQP+FSEDLW RCAEEVQNTYLKK+++Q+KGGERRQSPDFHEHQIL
Sbjct: 1027 ILWVNYHRAMGLPKEQPDFSEDLWNRCAEEVQNTYLKKTMAQLKGGERRQSPDFHEHQIL 1086

Query: 709  IFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCE 530
            IFLKSQWVKKMEKLGAK+IKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCE
Sbjct: 1087 IFLKSQWVKKMEKLGAKEIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCE 1146

Query: 529  KTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDI 350
            KTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDI
Sbjct: 1147 KTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDI 1206

Query: 349  KLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCP 170
            KLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVCP
Sbjct: 1207 KLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVCP 1266

Query: 169  EKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 2
            EKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK
Sbjct: 1267 EKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1322


>ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X]
            gi|23491554|dbj|BAC16785.1| RNA-dependent RNA polymerase
            [Tulip virus X]
          Length = 1361

 Score =  889 bits (2296), Expect = 0.0
 Identities = 436/537 (81%), Positives = 472/537 (87%)
 Frame = -3

Query: 1612 LSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGH 1433
            L RYYINATHRN K LANKLGVYSSN  PL V+YGF+P+PGLHLLVPSLVKKAAF DAGH
Sbjct: 762  LCRYYINATHRNVKELANKLGVYSSNPSPLHVSYGFRPEPGLHLLVPSLVKKAAFADAGH 821

Query: 1432 KVSTYAGCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLE 1253
            KVSTYAGCQGITAPKVQILLD+DTTMC+ EVLYTALSRAVDSIHF+NSNAQSSAFWEKLE
Sbjct: 822  KVSTYAGCQGITAPKVQILLDSDTTMCSSEVLYTALSRAVDSIHFINSNAQSSAFWEKLE 881

Query: 1252 ATPYLKTFLSLVREDKIAEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFERE 1073
            ATPYLKTFLSLVRE K+ EF+                PVE+ + TL   ++SL+DK++RE
Sbjct: 882  ATPYLKTFLSLVREHKLEEFTAVEDPPQEVAPPVTHFPVENASHTLGLIQDSLADKYDRE 941

Query: 1072 IFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLG 893
            I    HG TNCVQ +D T QLFSHQQAKDEALLWETI ARL +STPEANL EF AKKDLG
Sbjct: 942  ILNTNHGFTNCVQTEDLTVQLFSHQQAKDEALLWETIDARLRLSTPEANLAEFHAKKDLG 1001

Query: 892  DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 713
            D+LW NYH+AMKLPKEQP+FS +LW RCA EVQ TYL KS+ QIKGGERRQSPDF E++I
Sbjct: 1002 DVLWENYHRAMKLPKEQPDFSPELWERCAAEVQQTYLSKSLQQIKGGERRQSPDFPENKI 1061

Query: 712  LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 533
            LIFLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGTMARYMRR+RDAL PNNIMINC
Sbjct: 1062 LIFLKSQWVKKMEKLGAPKIKPGQTIASFQQAAVMLYGTMARYMRRYRDALGPNNIMINC 1121

Query: 532  EKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD 353
            E+TP DLSRWV N+WDF+KP YANDFTAFDQSQDGAMLQFEILKAK+FNLPEWVIEGYLD
Sbjct: 1122 ERTPADLSRWVRNHWDFTKPXYANDFTAFDQSQDGAMLQFEILKAKFFNLPEWVIEGYLD 1181

Query: 352  IKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVC 173
            IKL+P+IF GTL+IMRLTGEGPTFDANTECNIAYTHTRF IP+  AQ+YAGDDCAIA+VC
Sbjct: 1182 IKLTPQIFTGTLAIMRLTGEGPTFDANTECNIAYTHTRFHIPDHVAQLYAGDDCAIAEVC 1241

Query: 172  PEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 2
             EKPSFALLKNRIALQAKPAY PQ RG WAEFCGYLITPKGLIKDPLKLH+SLELAK
Sbjct: 1242 QEKPSFALLKNRIALQAKPAYAPQTRGAWAEFCGYLITPKGLIKDPLKLHSSLELAK 1298


>gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]
          Length = 1386

 Score =  773 bits (1996), Expect = 0.0
 Identities = 384/535 (71%), Positives = 428/535 (80%)
 Frame = -3

Query: 1612 LSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGH 1433
            L RYYINATHRN + LANKL VYS      K+T GFQP   LHLLVPSL+KK+A+ + GH
Sbjct: 788  LCRYYINATHRNKRDLANKLEVYSEKEGETKITMGFQPIKDLHLLVPSLLKKSAYGEMGH 847

Query: 1432 KVSTYAGCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLE 1253
            KVSTYAGCQGITAPK+QILLDNDT MC+KEVLYTALSRAV SIHF+N+    S+FWEKLE
Sbjct: 848  KVSTYAGCQGITAPKIQILLDNDTVMCSKEVLYTALSRAVHSIHFINTGPTHSSFWEKLE 907

Query: 1252 ATPYLKTFLSLVREDKIAEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFERE 1073
            ATPYLK FLS VRE+ IA                   PVE+ +  L  + E + +KFERE
Sbjct: 908  ATPYLKAFLSTVREEAIAAHQLPNADPRPDPEPKTHFPVENTSCALGAYMEKVPEKFERE 967

Query: 1072 IFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLG 893
            IFTE  GHTNCVQ  +P  QLF HQQAKDEALLWETIKARLTIS+PEAN EEF  KKD+G
Sbjct: 968  IFTEDRGHTNCVQTQNPLVQLFPHQQAKDEALLWETIKARLTISSPEANWEEFYRKKDIG 1027

Query: 892  DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 713
            DILW +Y KAM LP+E   FSEDLW   A EVQNTYL K ++ +K GERRQSPDF +HQI
Sbjct: 1028 DILWLHYKKAMTLPEEPLPFSEDLWRLSAAEVQNTYLSKPMNMLKNGERRQSPDFEKHQI 1087

Query: 712  LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 533
            L+FLKSQWVKKMEKLG  KIK GQTIASFQQHAVMLYGTMARYMRRFR+ L PN+I INC
Sbjct: 1088 LLFLKSQWVKKMEKLGGPKIKAGQTIASFQQHAVMLYGTMARYMRRFREVLGPNHIKINC 1147

Query: 532  EKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD 353
            E TP+DLSR++ NYWDF   SYANDFTAFDQSQDGAMLQFEILKAK+FN+PE +I+GYLD
Sbjct: 1148 EATPKDLSRFIQNYWDFKPASYANDFTAFDQSQDGAMLQFEILKAKHFNIPEEIIQGYLD 1207

Query: 352  IKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVC 173
            IKL+ KIFLG L IMRLTGEGPTFDANTECNIAYTHTRF+IP GTAQ+YAGDD AIA V 
Sbjct: 1208 IKLNAKIFLGVLGIMRLTGEGPTFDANTECNIAYTHTRFDIPPGTAQLYAGDDSAIACVP 1267

Query: 172  PEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLEL 8
            PE+PSF L+   +AL+AKP Y PQ  G WAEFCGYLITPKGLIKDP KL ASL+L
Sbjct: 1268 PERPSFKLIAKSLALEAKPVYAPQVAGAWAEFCGYLITPKGLIKDPAKLFASLKL 1322


>ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|56792005|gb|AAW30448.1|
            viral replicase [Hydrangea ringspot virus]
          Length = 1386

 Score =  770 bits (1987), Expect = 0.0
 Identities = 383/535 (71%), Positives = 427/535 (79%)
 Frame = -3

Query: 1612 LSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGH 1433
            L RYYINATHRN + LANKL VYS      K+T GFQP   LHLLVPSL+KK+A+ + GH
Sbjct: 788  LCRYYINATHRNKRDLANKLEVYSEKEGETKITMGFQPIKDLHLLVPSLLKKSAYGEMGH 847

Query: 1432 KVSTYAGCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLE 1253
            KVSTYAGCQGITAPK+QILLDNDT MC+KEVLYTALSRAV SIHF+N+    S+FWEKLE
Sbjct: 848  KVSTYAGCQGITAPKIQILLDNDTVMCSKEVLYTALSRAVHSIHFINTGPTHSSFWEKLE 907

Query: 1252 ATPYLKTFLSLVREDKIAEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFERE 1073
            ATPYLK FLS VRE+ IA                   PVE+ +  L  + E + +KFERE
Sbjct: 908  ATPYLKAFLSTVREEAIAAHQLPSADPRPDPEPKTHFPVENTSCALGAYMEKVPEKFERE 967

Query: 1072 IFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLG 893
            IFTE  GHTNCVQ  +P  QLF HQQAKDEALLWETIKARLTIS+PEAN EEF  KKD+G
Sbjct: 968  IFTEDRGHTNCVQTQNPLVQLFPHQQAKDEALLWETIKARLTISSPEANWEEFYKKKDIG 1027

Query: 892  DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 713
            DILW +Y KAM LP+E   FSEDLW   A EVQNTYL K ++ +K GERRQSPDF +HQI
Sbjct: 1028 DILWLHYKKAMTLPEEPLPFSEDLWRLSAAEVQNTYLSKPMNMLKNGERRQSPDFEKHQI 1087

Query: 712  LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 533
            L+FLKSQWVKKMEKLG  KIK GQTIASFQQHAVMLYGTMARYMRRFR+AL PN+I INC
Sbjct: 1088 LLFLKSQWVKKMEKLGGPKIKAGQTIASFQQHAVMLYGTMARYMRRFREALGPNHIKINC 1147

Query: 532  EKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLD 353
            E TP+DLSR++ NYWDF   SYANDFTAFDQSQD AMLQFEILKAK+FN+P  +I+GYLD
Sbjct: 1148 EATPKDLSRFIQNYWDFKPASYANDFTAFDQSQDAAMLQFEILKAKHFNIPGEIIQGYLD 1207

Query: 352  IKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVC 173
            IKL+ KIFLG L IMRLTGEGPTFDANTECNIAYTHTRF+IP GTAQ+YAGDD AIA V 
Sbjct: 1208 IKLNAKIFLGVLGIMRLTGEGPTFDANTECNIAYTHTRFDIPPGTAQLYAGDDSAIACVP 1267

Query: 172  PEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLEL 8
            PE+PSF L+   +AL+AKP Y PQ  G WAEFCGYLITPKGLIKDP KL ASL+L
Sbjct: 1268 PERPSFKLIAKSLALEAKPVYAPQVAGAWAEFCGYLITPKGLIKDPAKLFASLKL 1322


>ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mosaic virus]
            gi|773405|gb|AAC54775.1| ORF 1; putative RNA dependent
            RNA polymerase [Cassava common mosaic virus]
            gi|1587823|prf||2207297A ORF 1
          Length = 1449

 Score =  737 bits (1903), Expect = 0.0
 Identities = 375/541 (69%), Positives = 423/541 (78%), Gaps = 5/541 (0%)
 Frame = -3

Query: 1609 SRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHK 1430
            SRYYINATHRN+K LAN LGVYS N+  LK+T+GFQP   +HLLVPSL+KKAAF++AGHK
Sbjct: 857  SRYYINATHRNAKKLANMLGVYSDNNKELKITHGFQPIKDIHLLVPSLIKKAAFSEAGHK 916

Query: 1429 VSTYAGCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEA 1250
             STYAGCQGITA K+QILLD++T MC++EVLYTALSRAVDSIHF+N+   SS FWEKLEA
Sbjct: 917  TSTYAGCQGITARKLQILLDSNTPMCSQEVLYTALSRAVDSIHFINTAPTSSNFWEKLEA 976

Query: 1249 TPYLKTFLSLVREDKIAEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREI 1070
            TPYLKTFLS+VREDKI E+                 PVE+  T L++F E L+ K EREI
Sbjct: 977  TPYLKTFLSMVREDKILEWRPKEPEPAKEEPPKTHFPVENGNTILEEFTEELAQKHEREI 1036

Query: 1069 FTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGD 890
            F E+HGHTNCVQ D+   Q  SHQQAKDEALLWETIKARL IS  + N  EF  KKD+GD
Sbjct: 1037 FNESHGHTNCVQTDNKIIQTLSHQQAKDEALLWETIKARLVISHKQHNWTEFVKKKDIGD 1096

Query: 889  ILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQIL 710
            ILW NY +AM LP++   F E+LW   A E+Q+TYL KS   +K GERRQSPDF E  IL
Sbjct: 1097 ILWLNYKRAMHLPEDPIPF-EELWELAAREIQHTYLSKSTQMLKNGERRQSPDFGEKDIL 1155

Query: 709  IFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCE 530
            IFLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGTMARYMRR RD   P +IMINCE
Sbjct: 1156 IFLKSQWVKKMEKLGAPKIKPGQTIASFQQSAVMLYGTMARYMRRIRDIYMPEHIMINCE 1215

Query: 529  KTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDI 350
            +TP DLS W LNYW+F KPSYANDFTAFDQSQDGAMLQFEILKAK+ N+PEWV+EGYLDI
Sbjct: 1216 RTPTDLSYWALNYWNFDKPSYANDFTAFDQSQDGAMLQFEILKAKHHNIPEWVLEGYLDI 1275

Query: 349  KLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCP 170
            KL  +IFLGTLSIMRLTGE  TFDANTECNIAYTHTRF+IPEG AQ     D A+   C 
Sbjct: 1276 KLDSRIFLGTLSIMRLTGEYQTFDANTECNIAYTHTRFDIPEGVAQ-----DSAMDATCL 1330

Query: 169  EKPSFALLKNRIALQ-----AKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELA 5
            EKPSF L+++ ++L+      KP    Q  G+WAEFCGYLITPKGLIKDPLKL AS  LA
Sbjct: 1331 EKPSFKLIESELSLKLYAGDCKPCLKAQIPGEWAEFCGYLITPKGLIKDPLKLAASFRLA 1390

Query: 4    K 2
            K
Sbjct: 1391 K 1391


>ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|ACN58194.1| replicase
            [Allium virus X]
          Length = 1701

 Score =  693 bits (1788), Expect = 0.0
 Identities = 337/535 (62%), Positives = 407/535 (76%)
 Frame = -3

Query: 1606 RYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKV 1427
            RYYINATHRN + LA  LGVYS  +    ++   +P    HLLVPS++KK  + + G+K 
Sbjct: 1111 RYYINATHRNKQDLARMLGVYSERTGLTSISMSSRPLTDTHLLVPSIIKKRTYMELGYKT 1170

Query: 1426 STYAGCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEAT 1247
            STYAGCQGITAP++QILLD DTT+C  EVLYTALSRAV  IHF+N+ A S AFW+KL AT
Sbjct: 1171 STYAGCQGITAPRLQILLDCDTTLCADEVLYTALSRAVHGIHFINTGATSGAFWDKLNAT 1230

Query: 1246 PYLKTFLSLVREDKIAEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIF 1067
            PYLKTFL   RE+++ E                  PVE++   L++  E L +K +REI 
Sbjct: 1231 PYLKTFLDFTREERLKESQPREQEPTEPEGPTTHFPVENEKFVLEEQVEELLEKHDREIL 1290

Query: 1066 TEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDI 887
               HGHTNCVQ +D   QLFSHQQAKD+ALLW TI+ARL IS P+AN+ EF AKK++GD+
Sbjct: 1291 RPDHGHTNCVQTEDAVIQLFSHQQAKDQALLWATIEARLKISNPKANIAEFNAKKEIGDV 1350

Query: 886  LWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILI 707
            L+ +YH+AMKLP +   F EDLW  CA+EVQ TYL K I+ +K GE RQSPDF ++ I +
Sbjct: 1351 LFEHYHQAMKLPDKPIPFMEDLWVACAQEVQGTYLSKPINMLKNGEYRQSPDFDKNTIAL 1410

Query: 706  FLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEK 527
            FLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGTMARYMRR R+A  P  IMINCEK
Sbjct: 1411 FLKSQWVKKMEKLGAPKIKPGQTIASFQQSAVMLYGTMARYMRRMREAFQPPEIMINCEK 1470

Query: 526  TPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIK 347
             PQ LS W+ NYW F+  +YANDFT FDQSQDGAMLQFEILKAK+ ++PEWV+EGYLDIK
Sbjct: 1471 DPQTLSHWIQNYWKFNSYAYANDFTQFDQSQDGAMLQFEILKAKHHSIPEWVLEGYLDIK 1530

Query: 346  LSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPE 167
             + K+F G LSIMRLTGEGPTFDANTECNIAYTH RF++P+GTAQ+YAGDD A++ + PE
Sbjct: 1531 TNAKVFSGVLSIMRLTGEGPTFDANTECNIAYTHLRFDVPKGTAQLYAGDDSALSCLPPE 1590

Query: 166  KPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 2
            +PSFA  K ++ L +KPA   Q+RG WAEFCGYLITP G++KDP KL A++ LA+
Sbjct: 1591 RPSFADFKQQLTLTSKPALFAQKRGFWAEFCGYLITPLGIMKDPAKLAATVVLAQ 1645


>ref|NP_077079.1| replicase [Clover yellow mosaic virus]
          Length = 1670

 Score =  687 bits (1773), Expect = 0.0
 Identities = 329/535 (61%), Positives = 413/535 (77%)
 Frame = -3

Query: 1609 SRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHK 1430
            SRYYINATHRN + LA  LGVYS  +    ++   +P+P  HLLVPSL+KK ++T+ G+K
Sbjct: 1078 SRYYINATHRNKQDLARFLGVYSEKTGLTSISMSSRPEPDWHLLVPSLIKKRSYTEMGYK 1137

Query: 1429 VSTYAGCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEA 1250
             STYAGCQGITA +VQ+LLD DTT+C+ +VLYTALSRAV ++HF+N++A SSAFW+KL +
Sbjct: 1138 TSTYAGCQGITADRVQVLLDTDTTLCSDQVLYTALSRAVHAVHFINTSATSSAFWDKLNS 1197

Query: 1249 TPYLKTFLSLVREDKIAEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREI 1070
            TPYLKTFLS +RED++ E                  PVE++  +L+D  E L +K ERE+
Sbjct: 1198 TPYLKTFLSTLREDRLREEGPKPETPEEPKPATTHFPVENENLSLEDKVEELLEKHEREL 1257

Query: 1069 FTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGD 890
            ++  HG++NCVQ DDP  QLFSHQQAKD+ LLW TI+ARL IS P+AN+EEFR KK++GD
Sbjct: 1258 YSSDHGYSNCVQTDDPVVQLFSHQQAKDQTLLWATIEARLKISNPKANMEEFRMKKNVGD 1317

Query: 889  ILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQIL 710
            +LW NY +AMKLP +  EFS +LW  CAEEVQ TYL K ++ IK GE RQSPDF +H I 
Sbjct: 1318 VLWLNYKRAMKLPDKPIEFSHELWHACAEEVQKTYLSKPLNMIKNGENRQSPDFDKHTIS 1377

Query: 709  IFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCE 530
            +FLKSQWVKK+EKLGA KIKPGQTIASFQQ  VMLYGTMARYMRR R A  P NI +NCE
Sbjct: 1378 LFLKSQWVKKLEKLGAPKIKPGQTIASFQQATVMLYGTMARYMRRIRQAFQPPNIQLNCE 1437

Query: 529  KTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDI 350
            +TPQ L+ ++ + W F +P+YANDFT FDQSQDGAMLQFE+LKAK+ N+PE +I+GY+DI
Sbjct: 1438 QTPQQLTTFIKDQWSFDQPAYANDFTQFDQSQDGAMLQFEVLKAKHHNIPEAIIQGYIDI 1497

Query: 349  KLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCP 170
            K + K+F G L+IMRLTGEGPTFDANTECNIA+ HTRF I + TAQ+YAGDD A +++  
Sbjct: 1498 KTNAKVFTGVLAIMRLTGEGPTFDANTECNIAFNHTRFHISDDTAQLYAGDDTAFSKIPI 1557

Query: 169  EKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELA 5
            EK SF  +  ++AL +KP +  Q++G+WAEFCGY ITP GLIK+P KL A+L LA
Sbjct: 1558 EKVSFQGVAKQLALTSKPLFYKQKKGEWAEFCGYSITPLGLIKEPKKLQANLTLA 1612


>ref|YP_004849314.1| replicase [Tamus red mosaic virus] gi|345548097|gb|AEO12140.1|
            replicase [Tamus red mosaic virus]
          Length = 1501

 Score =  680 bits (1755), Expect = 0.0
 Identities = 327/536 (61%), Positives = 404/536 (75%)
 Frame = -3

Query: 1609 SRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHK 1430
            +RYY+NATHRN + LA  LGVYS  +    V+   +P   +H+LVPSL++K  +T+ G+K
Sbjct: 909  ARYYLNATHRNKQDLARMLGVYSERTGLTTVSMSSRPLKEVHMLVPSLIQKKTYTELGYK 968

Query: 1429 VSTYAGCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEA 1250
             STYAGCQGITAPKVQ+LL++DTT+CT +VLYTALSRAV SIHF+N++A S+AFW+KL A
Sbjct: 969  TSTYAGCQGITAPKVQVLLNSDTTLCTDKVLYTALSRAVHSIHFINTSASSAAFWDKLNA 1028

Query: 1249 TPYLKTFLSLVREDKIAEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREI 1070
            TPYLKTFLS VRE  +A                   PVE+    L+   E L +K +REI
Sbjct: 1029 TPYLKTFLSTVREQSLASAKPREEGPTPVAAPKTHVPVENSNLCLEGAVEKLLEKHDREI 1088

Query: 1069 FTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGD 890
            F   HGH+NCVQ D+PT QL SHQQAKD+ LLW TI+ARL ISTPE NL E+  K+++GD
Sbjct: 1089 FRADHGHSNCVQTDNPTIQLSSHQQAKDQTLLWATIEARLKISTPERNLAEYLMKREVGD 1148

Query: 889  ILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQIL 710
            +LW +Y  AM LP+E   F + LW  CAEEVQ TYL K +  +K GE RQSPDFH++ I 
Sbjct: 1149 VLWLHYKNAMNLPEEPIPFEQTLWDTCAEEVQKTYLSKPMHMLKNGELRQSPDFHKNTIA 1208

Query: 709  IFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCE 530
            +FLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGTMARYMRR R+   P ++ INCE
Sbjct: 1209 LFLKSQWVKKMEKLGADKIKPGQTIASFQQAAVMLYGTMARYMRRMREVFQPTHVFINCE 1268

Query: 529  KTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDI 350
            ++P+ +S W+ N W+F   +YANDFT FDQSQDGAMLQFEILKAK+ ++PEWV+EGYLDI
Sbjct: 1269 QSPEGMSDWIKNEWNFKGNAYANDFTQFDQSQDGAMLQFEILKAKHHSIPEWVLEGYLDI 1328

Query: 349  KLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCP 170
            K +  +F GTL IMRLTGEGPTFDANTECNIAYTH RF +P+GTAQ YAGDD  +A +  
Sbjct: 1329 KTNAHVFTGTLGIMRLTGEGPTFDANTECNIAYTHLRFNVPKGTAQAYAGDDSVLACIPE 1388

Query: 169  EKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 2
            E+ SF + KN++ L AKP Y PQ +G+WA+FCG+L TP G +K+PLK+ A +ELAK
Sbjct: 1389 ERESFKMWKNKLELTAKPEYFPQMQGEWAQFCGFLFTPLGALKEPLKMLAVVELAK 1444


>gb|AFM77886.1| replicase [Hosta virus X]
          Length = 1473

 Score =  680 bits (1754), Expect = 0.0
 Identities = 333/534 (62%), Positives = 399/534 (74%)
 Frame = -3

Query: 1606 RYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKV 1427
            RYY+NATHRN + LAN LG+YS     LKVT+     P +H+LVPSL+KKA   + GHK 
Sbjct: 863  RYYLNATHRNPRNLANALGIYSEKPGNLKVTFTNHLLPEMHILVPSLLKKATLEELGHKC 922

Query: 1426 STYAGCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEAT 1247
            STYAGCQG+T  KVQI LD++TT+C+ EVLYTALSRAV+ I+FVNS   +  FW KLEAT
Sbjct: 923  STYAGCQGVTLSKVQIYLDSNTTLCSNEVLYTALSRAVEQINFVNSGPFNGPFWAKLEAT 982

Query: 1246 PYLKTFLSLVREDKIAEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIF 1067
            PYLKTFL L RE+KI E +                PVE          E + +K  REI+
Sbjct: 983  PYLKTFLRLTREEKINEITPEEPKPKEPEPPKTHFPVETSAHLYSSITEEMPEKHAREIY 1042

Query: 1066 TEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDI 887
             + HGHTNCVQ D+P  Q+F+HQQAKDEAL WETI+ARL I+T EAN++E   K+D+GD+
Sbjct: 1043 NKTHGHTNCVQTDEPLVQMFAHQQAKDEALFWETIEARLRITTSEANVQELNEKRDIGDL 1102

Query: 886  LWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILI 707
            L+  YHKAM LPK+   F  DLW  CA+EVQ TYL K I+ IK GE+RQ PDF ++ I++
Sbjct: 1103 LFHAYHKAMGLPKDPIPFENDLWETCAQEVQQTYLSKPINLIKNGEKRQGPDFDKNAIML 1162

Query: 706  FLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEK 527
            FLKSQWVKKMEKLGA  IKPGQTIASF Q  VMLYGTMARYMRR RD   P +I+INCEK
Sbjct: 1163 FLKSQWVKKMEKLGAPTIKPGQTIASFHQITVMLYGTMARYMRRIRDRFCPKHILINCEK 1222

Query: 526  TPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIK 347
            TP  +S +V   WDFS  +YANDFTAFDQSQDGAMLQFEI+KAK+ N+PE +I GY+DIK
Sbjct: 1223 TPTQISDFVKAQWDFSDFAYANDFTAFDQSQDGAMLQFEIIKAKFHNIPEDIILGYMDIK 1282

Query: 346  LSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPE 167
             + KIFLGTL+IMRLTGEGPTFDANTECNIAYTH RF +PE  AQ+YAGDD A+++VCPE
Sbjct: 1283 TNAKIFLGTLAIMRLTGEGPTFDANTECNIAYTHLRFNVPENVAQVYAGDDSALSKVCPE 1342

Query: 166  KPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELA 5
            K SF    +R+ L++KP   PQ +G WAEFCG LITP+G+IKDP+KLHAS  LA
Sbjct: 1343 KDSFKQFADRLTLKSKPQVFPQTQGAWAEFCGLLITPRGIIKDPVKLHASWVLA 1396


>ref|YP_002308464.1| replicase [Hosta virus X] gi|58415284|emb|CAF04078.1| replicase
            [Hosta virus X]
          Length = 1507

 Score =  680 bits (1754), Expect = 0.0
 Identities = 333/534 (62%), Positives = 399/534 (74%)
 Frame = -3

Query: 1606 RYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKV 1427
            RYY+NATHRN + LAN LG+YS     LKVT+     P +H+LVPSL+KKA   + GHK 
Sbjct: 897  RYYLNATHRNPRNLANALGIYSEKPGNLKVTFTNHLLPEMHILVPSLLKKATLEELGHKC 956

Query: 1426 STYAGCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEAT 1247
            STYAGCQG+T  KVQI LD++TT+C+ EVLYTALSRAV+ I+FVNS   +  FW KLEAT
Sbjct: 957  STYAGCQGVTLSKVQIYLDSNTTLCSNEVLYTALSRAVEQINFVNSGPFNGPFWAKLEAT 1016

Query: 1246 PYLKTFLSLVREDKIAEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIF 1067
            PYLKTFL L RE+KI E +                PVE          E + +K  REI+
Sbjct: 1017 PYLKTFLRLTREEKINEITPEEPKPKEPEPPKTHFPVETSAHLYSSITEEMPEKHAREIY 1076

Query: 1066 TEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDI 887
             + HGHTNCVQ D+P  Q+F+HQQAKDEAL WETI+ARL I+T EAN++E   K+D+GD+
Sbjct: 1077 NKTHGHTNCVQTDEPLVQMFAHQQAKDEALFWETIEARLRITTSEANVQELNEKRDIGDL 1136

Query: 886  LWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILI 707
            L+  YHKAM LPK+   F  DLW  CA+EVQ TYL K I+ IK GE+RQ PDF ++ I++
Sbjct: 1137 LFHAYHKAMGLPKDPIPFENDLWETCAQEVQQTYLSKPINLIKNGEKRQGPDFDKNAIML 1196

Query: 706  FLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEK 527
            FLKSQWVKKMEKLGA  IKPGQTIASF Q  VMLYGTMARYMRR RD   P +I+INCEK
Sbjct: 1197 FLKSQWVKKMEKLGAPTIKPGQTIASFHQITVMLYGTMARYMRRIRDRFCPKHILINCEK 1256

Query: 526  TPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIK 347
            TP  +S +V   WDFS  +YANDFTAFDQSQDGAMLQFEI+KAK+ N+PE +I GY+DIK
Sbjct: 1257 TPTQISDFVKAQWDFSDFAYANDFTAFDQSQDGAMLQFEIIKAKFHNIPEDIILGYMDIK 1316

Query: 346  LSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPE 167
             + KIFLGTL+IMRLTGEGPTFDANTECNIAYTH RF +PE  AQ+YAGDD A+++VCPE
Sbjct: 1317 TNAKIFLGTLAIMRLTGEGPTFDANTECNIAYTHLRFNVPENVAQVYAGDDSALSKVCPE 1376

Query: 166  KPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELA 5
            K SF    +R+ L++KP   PQ +G WAEFCG LITP+G+IKDP+KLHAS  LA
Sbjct: 1377 KDSFKQFADRLTLKSKPQVFPQTQGAWAEFCGLLITPRGIIKDPVKLHASWVLA 1430


>gb|ACS28233.1| replicase [Alternanthera mosaic virus]
          Length = 1541

 Score =  664 bits (1714), Expect = 0.0
 Identities = 330/539 (61%), Positives = 395/539 (73%), Gaps = 3/539 (0%)
 Frame = -3

Query: 1609 SRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHK 1430
            SRYYINATHRN + LANKLGVYS  +    +T G  P PGLHLLVPSL KK AF++ GHK
Sbjct: 938  SRYYINATHRNKRDLANKLGVYSEVTGITSITQGNHPVPGLHLLVPSLYKKEAFSEMGHK 997

Query: 1429 VSTYAGCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEA 1250
            VSTYAGCQG+TAP+VQILL  +T+MC++EV+YTALSRAV SIHFVN    + AFW KLE+
Sbjct: 998  VSTYAGCQGLTAPRVQILLSEETSMCSREVIYTALSRAVHSIHFVNCGPNNQAFWAKLES 1057

Query: 1249 TPYLKTFLSLVREDKIAEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREI 1070
            TPYLK FLS +RED                      PV+      +D  + + +K EREI
Sbjct: 1058 TPYLKAFLSTLREDAAPVVKPKEEAPAPVDPPKTHIPVDSAMPIYEDLLDQMPEKHEREI 1117

Query: 1069 FTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGD 890
            F+E HGH+NCVQ +D   Q+FSHQQAKDE LLW TI+ARL IS P+AN +EF  K+ +GD
Sbjct: 1118 FSERHGHSNCVQTEDTFVQMFSHQQAKDETLLWATIEARLVISNPKANWQEFMEKRPIGD 1177

Query: 889  ILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQIL 710
            +L+  Y +AM LP E   F   LW  C  EVQ TYL K I+ +K G+ RQSPD+  + I 
Sbjct: 1178 VLFGFYREAMGLPTEPIAFEPQLWESCIHEVQRTYLAKPINMLKNGQARQSPDYDPNMIS 1237

Query: 709  IFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCE 530
            +FLKSQWVKKMEKLGA KIKPGQTIASF Q  VML+GTMARYMRR R+   P NI INCE
Sbjct: 1238 LFLKSQWVKKMEKLGALKIKPGQTIASFHQATVMLFGTMARYMRRMREIFQPKNIAINCE 1297

Query: 529  KTPQDLSRWVL---NYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGY 359
             TP+DL+ W +     W F+ PS ANDFTAFDQSQDGAMLQFE+LKAK+ ++PE V++ Y
Sbjct: 1298 MTPEDLTDWAVGSAGQWKFAGPSLANDFTAFDQSQDGAMLQFEVLKAKHHSIPEDVLDAY 1357

Query: 358  LDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQ 179
            L IK + KIFLGTL+IMRLTGEGPTFDANTECNIA+TH +F+IP+GTAQ+YAGDD AI  
Sbjct: 1358 LHIKTNSKIFLGTLTIMRLTGEGPTFDANTECNIAFTHAKFQIPKGTAQLYAGDDSAIDG 1417

Query: 178  VCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 2
              P + SF L++ ++ L++KPA   QE+G WAEFCGY ITPKG IKDP KLHASL L K
Sbjct: 1418 NPPVRESFRLVEQKLKLRSKPAIAMQEKGDWAEFCGYRITPKGFIKDPKKLHASLVLEK 1476