BLASTX nr result
ID: Achyranthes23_contig00014370
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00014370
(767 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003534400.1| PREDICTED: DNA-directed RNA polymerases II, ... 213 6e-53
gb|AFK46555.1| unknown [Lotus japonicus] 213 7e-53
ref|NP_001240124.1| uncharacterized protein LOC100784219 [Glycin... 213 7e-53
gb|EMJ02624.1| hypothetical protein PRUPE_ppa013559mg [Prunus pe... 212 1e-52
gb|ACJ83854.1| unknown [Medicago truncatula] gi|388519401|gb|AFK... 212 1e-52
gb|ESW03389.1| hypothetical protein PHAVU_011G010100g [Phaseolus... 211 2e-52
ref|XP_004149719.1| PREDICTED: DNA-directed RNA polymerase II su... 211 3e-52
ref|XP_004489205.1| PREDICTED: DNA-directed RNA polymerase II su... 209 8e-52
ref|XP_002285578.1| PREDICTED: DNA-directed RNA polymerase II su... 209 1e-51
ref|XP_006439089.1| hypothetical protein CICLE_v10033103mg [Citr... 208 1e-51
ref|XP_004289695.1| PREDICTED: DNA-directed RNA polymerase II su... 207 2e-51
ref|XP_006292069.1| hypothetical protein CARUB_v10018264mg [Caps... 207 3e-51
ref|XP_002877842.1| ATRPB13.6 [Arabidopsis lyrata subsp. lyrata]... 206 9e-51
ref|XP_002447457.1| hypothetical protein SORBIDRAFT_06g001360 [S... 205 1e-50
ref|XP_002313254.1| DNA-directed RNA polymerase II 13.6 kDa poly... 205 1e-50
ref|XP_006403846.1| hypothetical protein EUTSA_v10010833mg [Eutr... 204 2e-50
ref|XP_004955770.1| PREDICTED: DNA-directed RNA polymerase II su... 204 2e-50
ref|NP_001142057.1| uncharacterized protein LOC100274213 [Zea ma... 204 2e-50
ref|NP_190777.1| DNA-directed RNA polymerases II, IV and V subun... 204 3e-50
dbj|BAJ85721.1| predicted protein [Hordeum vulgare subsp. vulgar... 203 6e-50
>ref|XP_003534400.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 11
[Glycine max]
Length = 116
Score = 213 bits (542), Expect = 6e-53
Identities = 103/116 (88%), Positives = 110/116 (94%)
Frame = -2
Query: 691 MNAPDRYERFVVPEGVKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPTVLFAG 512
MNAPDRYERFVVPEG KKVSYERDTKIINAASFTIERE+HTIGNILRMQLHRDP VLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDPNVLFAG 60
Query: 511 YKLPHPLQYKILVRIHTTSQSSPTQAYNQAINDLDKELDGLKSAFEAEVTRFSSEY 344
YKLPHPLQYKI+VRIHTTSQSSP QAYNQ+INDLD+ELD LKSAFEAE+ +FS +Y
Sbjct: 61 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQSINDLDRELDHLKSAFEAEMLKFSRDY 116
>gb|AFK46555.1| unknown [Lotus japonicus]
Length = 116
Score = 213 bits (541), Expect = 7e-53
Identities = 103/116 (88%), Positives = 109/116 (93%)
Frame = -2
Query: 691 MNAPDRYERFVVPEGVKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPTVLFAG 512
MNAPDRYERFVVPEG KKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDP VLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPNVLFAG 60
Query: 511 YKLPHPLQYKILVRIHTTSQSSPTQAYNQAINDLDKELDGLKSAFEAEVTRFSSEY 344
YKLPHPLQYKI+VRIHT SQSSP QAYNQ+INDLDKELD LK+AFEA++ RFS +Y
Sbjct: 61 YKLPHPLQYKIIVRIHTASQSSPMQAYNQSINDLDKELDHLKNAFEADMLRFSRDY 116
>ref|NP_001240124.1| uncharacterized protein LOC100784219 [Glycine max]
gi|255626235|gb|ACU13462.1| unknown [Glycine max]
Length = 116
Score = 213 bits (541), Expect = 7e-53
Identities = 102/116 (87%), Positives = 110/116 (94%)
Frame = -2
Query: 691 MNAPDRYERFVVPEGVKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPTVLFAG 512
MNAPDRYERFVVPEG KKVSYERDTKIINAASFTIERE+HTIGNILRMQLHRDP VLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDPNVLFAG 60
Query: 511 YKLPHPLQYKILVRIHTTSQSSPTQAYNQAINDLDKELDGLKSAFEAEVTRFSSEY 344
YKLPHPLQYKI+VRIHTTSQSSP QAYNQ++NDLD+ELD LKSAFEAE+ +FS +Y
Sbjct: 61 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQSVNDLDRELDHLKSAFEAEMLKFSRDY 116
>gb|EMJ02624.1| hypothetical protein PRUPE_ppa013559mg [Prunus persica]
Length = 116
Score = 212 bits (539), Expect = 1e-52
Identities = 105/116 (90%), Positives = 107/116 (92%)
Frame = -2
Query: 691 MNAPDRYERFVVPEGVKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPTVLFAG 512
MNAPDRYERFVVPEG KKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRD VLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDENVLFAG 60
Query: 511 YKLPHPLQYKILVRIHTTSQSSPTQAYNQAINDLDKELDGLKSAFEAEVTRFSSEY 344
YKLPHPLQYKI+VRIHTTSQSSP QAYNQAINDLDKELD LKS FEAEV + S EY
Sbjct: 61 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKSCFEAEVAKHSVEY 116
>gb|ACJ83854.1| unknown [Medicago truncatula] gi|388519401|gb|AFK47762.1| unknown
[Medicago truncatula]
Length = 116
Score = 212 bits (539), Expect = 1e-52
Identities = 101/116 (87%), Positives = 109/116 (93%)
Frame = -2
Query: 691 MNAPDRYERFVVPEGVKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPTVLFAG 512
MNAPDRYERFVVPEG KKV+YERDTKIINAASFTIEREDHTIGNILRMQLH+DP VLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVAYERDTKIINAASFTIEREDHTIGNILRMQLHKDPNVLFAG 60
Query: 511 YKLPHPLQYKILVRIHTTSQSSPTQAYNQAINDLDKELDGLKSAFEAEVTRFSSEY 344
YKLPHPLQYKI++RIHTTSQSSP QAYNQ+INDLDKELD LKS FEAE+ +FS +Y
Sbjct: 61 YKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGFEAELLKFSKDY 116
>gb|ESW03389.1| hypothetical protein PHAVU_011G010100g [Phaseolus vulgaris]
Length = 116
Score = 211 bits (538), Expect = 2e-52
Identities = 101/116 (87%), Positives = 110/116 (94%)
Frame = -2
Query: 691 MNAPDRYERFVVPEGVKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPTVLFAG 512
MNAPDRYERFVVPEG KKVSYERDTKIINAASFTIERE+HTIGNILRMQLHRDP VLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDPNVLFAG 60
Query: 511 YKLPHPLQYKILVRIHTTSQSSPTQAYNQAINDLDKELDGLKSAFEAEVTRFSSEY 344
YKLPHPLQYKI++RIHTTSQSSP QAYNQ+INDLD+ELD LK+AFEAE+ +FS +Y
Sbjct: 61 YKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDRELDHLKNAFEAEMLKFSRDY 116
>ref|XP_004149719.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
[Cucumis sativus] gi|449516703|ref|XP_004165386.1|
PREDICTED: DNA-directed RNA polymerase II subunit
RPB11-like [Cucumis sativus]
Length = 116
Score = 211 bits (536), Expect = 3e-52
Identities = 103/116 (88%), Positives = 108/116 (93%)
Frame = -2
Query: 691 MNAPDRYERFVVPEGVKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPTVLFAG 512
MNAPDRYERFVVPEG KKVSYERDTKIINAASFTIERE+HTIGNILRMQLHRD VLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAG 60
Query: 511 YKLPHPLQYKILVRIHTTSQSSPTQAYNQAINDLDKELDGLKSAFEAEVTRFSSEY 344
YKLPHPLQYKI+VRIHTTSQSSP QAYNQAINDLDKELD LK+AFEAE +FS +Y
Sbjct: 61 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFEAEFAKFSRDY 116
>ref|XP_004489205.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like [Cicer
arietinum] gi|502152948|ref|XP_004509165.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB11-like
isoform X1 [Cicer arietinum]
gi|502152950|ref|XP_004509166.1| PREDICTED: DNA-directed
RNA polymerase II subunit RPB11-like isoform X2 [Cicer
arietinum]
Length = 116
Score = 209 bits (532), Expect = 8e-52
Identities = 101/116 (87%), Positives = 107/116 (92%)
Frame = -2
Query: 691 MNAPDRYERFVVPEGVKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPTVLFAG 512
MNAPDRYERFVVPEG KKVSYERDTKIINAASFTIEREDHTI NILRMQLHRDP VLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIANILRMQLHRDPNVLFAG 60
Query: 511 YKLPHPLQYKILVRIHTTSQSSPTQAYNQAINDLDKELDGLKSAFEAEVTRFSSEY 344
YKLPHPLQYKI+VRIHT SQSSP QAYNQ+INDLDKELD LK+ FEAE+ +FS +Y
Sbjct: 61 YKLPHPLQYKIIVRIHTASQSSPMQAYNQSINDLDKELDQLKNGFEAELLKFSKDY 116
>ref|XP_002285578.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11 [Vitis
vinifera] gi|296082163|emb|CBI21168.3| unnamed protein
product [Vitis vinifera]
Length = 116
Score = 209 bits (531), Expect = 1e-51
Identities = 101/116 (87%), Positives = 107/116 (92%)
Frame = -2
Query: 691 MNAPDRYERFVVPEGVKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPTVLFAG 512
MNAPDRYERFVVPEG KKVSYERDTKIINAASFT+EREDHTIGNILRMQLHRD VLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTVEREDHTIGNILRMQLHRDENVLFAG 60
Query: 511 YKLPHPLQYKILVRIHTTSQSSPTQAYNQAINDLDKELDGLKSAFEAEVTRFSSEY 344
YKLPHPLQYKI++RIHTTSQSSP QAYNQAINDLDKELD LK+AFE E+ + S EY
Sbjct: 61 YKLPHPLQYKIIIRIHTTSQSSPMQAYNQAINDLDKELDYLKNAFEVELAKHSREY 116
>ref|XP_006439089.1| hypothetical protein CICLE_v10033103mg [Citrus clementina]
gi|568858641|ref|XP_006482856.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 11-like [Citrus
sinensis] gi|557541285|gb|ESR52329.1| hypothetical
protein CICLE_v10033103mg [Citrus clementina]
Length = 116
Score = 208 bits (530), Expect = 1e-51
Identities = 103/116 (88%), Positives = 107/116 (92%)
Frame = -2
Query: 691 MNAPDRYERFVVPEGVKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPTVLFAG 512
MNAPDRYERFVVPEG KKVSYERDTKIINAASFTIERE+HTIGNILRMQLHRD VLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAG 60
Query: 511 YKLPHPLQYKILVRIHTTSQSSPTQAYNQAINDLDKELDGLKSAFEAEVTRFSSEY 344
YKLPHPLQYKI+VRIHTTSQSSP QAYNQAINDLDKELD LKSAFEAE+ + S Y
Sbjct: 61 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDTLKSAFEAELAKHSRVY 116
>ref|XP_004289695.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
isoform 2 [Fragaria vesca subsp. vesca]
Length = 118
Score = 207 bits (528), Expect = 2e-51
Identities = 103/115 (89%), Positives = 106/115 (92%)
Frame = -2
Query: 691 MNAPDRYERFVVPEGVKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPTVLFAG 512
MNAPDRYERFVVPEG KKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRD VLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDENVLFAG 60
Query: 511 YKLPHPLQYKILVRIHTTSQSSPTQAYNQAINDLDKELDGLKSAFEAEVTRFSSE 347
YKLPHPLQYKI+VRIHTTSQSSP QAYNQAINDLDKELD LKS FEAEV + S +
Sbjct: 61 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKSNFEAEVAKHSMQ 115
>ref|XP_006292069.1| hypothetical protein CARUB_v10018264mg [Capsella rubella]
gi|482560776|gb|EOA24967.1| hypothetical protein
CARUB_v10018264mg [Capsella rubella]
Length = 116
Score = 207 bits (527), Expect = 3e-51
Identities = 100/116 (86%), Positives = 109/116 (93%)
Frame = -2
Query: 691 MNAPDRYERFVVPEGVKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPTVLFAG 512
MNAPDRYERFVVPEG KKVSY+RDTKIINAASFTIEREDHTIGNI+RMQLHRD VLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYDRDTKIINAASFTIEREDHTIGNIVRMQLHRDENVLFAG 60
Query: 511 YKLPHPLQYKILVRIHTTSQSSPTQAYNQAINDLDKELDGLKSAFEAEVTRFSSEY 344
Y+LPHPL+YKI+VRIHTTSQSSP QAYNQAINDLDKELD LK+ FEAEV +FS++Y
Sbjct: 61 YQLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDYLKNQFEAEVAKFSNQY 116
>ref|XP_002877842.1| ATRPB13.6 [Arabidopsis lyrata subsp. lyrata]
gi|297323680|gb|EFH54101.1| ATRPB13.6 [Arabidopsis
lyrata subsp. lyrata]
Length = 116
Score = 206 bits (523), Expect = 9e-51
Identities = 99/116 (85%), Positives = 109/116 (93%)
Frame = -2
Query: 691 MNAPDRYERFVVPEGVKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPTVLFAG 512
MNAPDRYERFVVPEG KKVSY+RDTKIINAASFTIEREDHTIGNI+RMQLHRD VLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYDRDTKIINAASFTIEREDHTIGNIVRMQLHRDENVLFAG 60
Query: 511 YKLPHPLQYKILVRIHTTSQSSPTQAYNQAINDLDKELDGLKSAFEAEVTRFSSEY 344
Y+LPHPL+YKI+VRIHTTSQSSP QAYNQAINDLDKELD LK+ FEAEV +FS+++
Sbjct: 61 YQLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDYLKNQFEAEVAKFSNQF 116
>ref|XP_002447457.1| hypothetical protein SORBIDRAFT_06g001360 [Sorghum bicolor]
gi|241938640|gb|EES11785.1| hypothetical protein
SORBIDRAFT_06g001360 [Sorghum bicolor]
Length = 117
Score = 205 bits (522), Expect = 1e-50
Identities = 99/112 (88%), Positives = 105/112 (93%)
Frame = -2
Query: 691 MNAPDRYERFVVPEGVKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPTVLFAG 512
MNAPDRYERFVVPEG KKVSYERDTKI+NAASFTIEREDHTIGNI+RMQLHRDP VLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIVNAASFTIEREDHTIGNIVRMQLHRDPNVLFAG 60
Query: 511 YKLPHPLQYKILVRIHTTSQSSPTQAYNQAINDLDKELDGLKSAFEAEVTRF 356
YKLPHPLQYKI+VRIHTTSQSSPTQAY+QA+NDLDKEL+ LK AFE E RF
Sbjct: 61 YKLPHPLQYKIIVRIHTTSQSSPTQAYSQAVNDLDKELEYLKQAFEDEKNRF 112
>ref|XP_002313254.1| DNA-directed RNA polymerase II 13.6 kDa polypeptide family protein
[Populus trichocarpa] gi|566186802|ref|XP_006379118.1|
hypothetical protein POPTR_0009s07520g [Populus
trichocarpa] gi|118484276|gb|ABK94017.1| unknown
[Populus trichocarpa] gi|222849662|gb|EEE87209.1|
DNA-directed RNA polymerase II 13.6 kDa polypeptide
family protein [Populus trichocarpa]
gi|550331237|gb|ERP56915.1| hypothetical protein
POPTR_0009s07520g [Populus trichocarpa]
Length = 116
Score = 205 bits (522), Expect = 1e-50
Identities = 100/116 (86%), Positives = 106/116 (91%)
Frame = -2
Query: 691 MNAPDRYERFVVPEGVKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPTVLFAG 512
MNAPDRYERFVVPEG KKVSYERDTKIINAASFT+EREDHTIGNILRMQLHRD VLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTVEREDHTIGNILRMQLHRDDNVLFAG 60
Query: 511 YKLPHPLQYKILVRIHTTSQSSPTQAYNQAINDLDKELDGLKSAFEAEVTRFSSEY 344
YKLPHPL+YKI+VRIHTTSQSSP QAYNQAINDLDKELD LK+AFEAE+ +Y
Sbjct: 61 YKLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFEAELANRPGQY 116
>ref|XP_006403846.1| hypothetical protein EUTSA_v10010833mg [Eutrema salsugineum]
gi|557104965|gb|ESQ45299.1| hypothetical protein
EUTSA_v10010833mg [Eutrema salsugineum]
Length = 116
Score = 204 bits (520), Expect = 2e-50
Identities = 98/116 (84%), Positives = 109/116 (93%)
Frame = -2
Query: 691 MNAPDRYERFVVPEGVKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPTVLFAG 512
MNAPDRYERFVVPEG KKV+Y+RDTKIINAASFTIEREDHTIGNI+RMQLHRD VLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVAYDRDTKIINAASFTIEREDHTIGNIVRMQLHRDENVLFAG 60
Query: 511 YKLPHPLQYKILVRIHTTSQSSPTQAYNQAINDLDKELDGLKSAFEAEVTRFSSEY 344
Y+LPHPL+YKI+VRIHTTSQSSP QAYNQAINDLDKEL+ LK+ FEAEV +FS++Y
Sbjct: 61 YQLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELEYLKNQFEAEVAKFSTQY 116
>ref|XP_004955770.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
[Setaria italica] gi|514825448|ref|XP_004987377.1|
PREDICTED: DNA-directed RNA polymerase II subunit
RPB11-like [Setaria italica]
Length = 120
Score = 204 bits (520), Expect = 2e-50
Identities = 98/112 (87%), Positives = 104/112 (92%)
Frame = -2
Query: 691 MNAPDRYERFVVPEGVKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPTVLFAG 512
MNAPDRYERFVVPEG KKVSYERDTKI+NAASFTIEREDHTIGNI+RMQLHRDP VLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIVNAASFTIEREDHTIGNIVRMQLHRDPNVLFAG 60
Query: 511 YKLPHPLQYKILVRIHTTSQSSPTQAYNQAINDLDKELDGLKSAFEAEVTRF 356
YKLPHPLQYKI+VRIHTTSQSSPTQAY QA+NDLDKEL+ LK AFE E R+
Sbjct: 61 YKLPHPLQYKIIVRIHTTSQSSPTQAYTQAVNDLDKELEYLKQAFEVEKNRY 112
>ref|NP_001142057.1| uncharacterized protein LOC100274213 [Zea mays]
gi|194696560|gb|ACF82364.1| unknown [Zea mays]
gi|194699868|gb|ACF84018.1| unknown [Zea mays]
gi|194706942|gb|ACF87555.1| unknown [Zea mays]
gi|195615212|gb|ACG29436.1| DNA-directed RNA polymerase
II subunit J [Zea mays] gi|195628620|gb|ACG36140.1|
DNA-directed RNA polymerase II subunit J [Zea mays]
gi|195656859|gb|ACG47897.1| DNA-directed RNA polymerase
II subunit J [Zea mays] gi|413937791|gb|AFW72342.1|
DNA-directed RNA polymerase II subunit J isoform 1 [Zea
mays] gi|413937792|gb|AFW72343.1| DNA-directed RNA
polymerase II subunit J isoform 2 [Zea mays]
gi|413937793|gb|AFW72344.1| DNA-directed RNA polymerase
II subunit J isoform 3 [Zea mays]
gi|413937794|gb|AFW72345.1| DNA-directed RNA polymerase
II subunit J isoform 4 [Zea mays]
gi|413937795|gb|AFW72346.1| DNA-directed RNA polymerase
II subunit J isoform 5 [Zea mays]
Length = 120
Score = 204 bits (520), Expect = 2e-50
Identities = 98/112 (87%), Positives = 104/112 (92%)
Frame = -2
Query: 691 MNAPDRYERFVVPEGVKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPTVLFAG 512
MNAPDRYERFVVPEG KKVSYERDTKI+NAASFT+EREDHT+GNILRMQLHRDP VLFAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSYERDTKIVNAASFTVEREDHTVGNILRMQLHRDPNVLFAG 60
Query: 511 YKLPHPLQYKILVRIHTTSQSSPTQAYNQAINDLDKELDGLKSAFEAEVTRF 356
YKLPHPLQYKI+VRIHTTSQSSPTQAY QAINDLDKEL+ LK AFE E R+
Sbjct: 61 YKLPHPLQYKIIVRIHTTSQSSPTQAYTQAINDLDKELEYLKQAFEDEKNRY 112
>ref|NP_190777.1| DNA-directed RNA polymerases II, IV and V subunit 11 [Arabidopsis
thaliana] gi|3219858|sp|Q38859.1|NRPBB_ARATH RecName:
Full=DNA-directed RNA polymerases II, IV and V subunit
11; AltName: Full=DNA-directed RNA polymerase II 13.6
kDa polypeptide; AltName: Full=DNA-directed RNA
polymerase II subunit J; AltName: Full=DNA-directed RNA
polymerase II subunit RPB11; Short=RNA polymerase II
subunit B11 gi|881501|gb|AAB02849.1| RNA polymerase II
13.6 kDa subunit [Arabidopsis thaliana]
gi|4678938|emb|CAB41329.1| DNA-directed RNA polymerase
II 13.6K chain [Arabidopsis thaliana]
gi|29029080|gb|AAO64919.1| At3g52090 [Arabidopsis
thaliana] gi|332645368|gb|AEE78889.1| non-catalytic
subunit of DNA-dependent RNA polymerases II, IV and V
[Arabidopsis thaliana]
Length = 116
Score = 204 bits (518), Expect = 3e-50
Identities = 97/116 (83%), Positives = 109/116 (93%)
Frame = -2
Query: 691 MNAPDRYERFVVPEGVKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPTVLFAG 512
MNAP+RYERFVVPEG KKVSY+RDTKIINAASFT+EREDHTIGNI+RMQLHRD VLFAG
Sbjct: 1 MNAPERYERFVVPEGTKKVSYDRDTKIINAASFTVEREDHTIGNIVRMQLHRDENVLFAG 60
Query: 511 YKLPHPLQYKILVRIHTTSQSSPTQAYNQAINDLDKELDGLKSAFEAEVTRFSSEY 344
Y+LPHPL+YKI+VRIHTTSQSSP QAYNQAINDLDKELD LK+ FEAEV +FS+++
Sbjct: 61 YQLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDYLKNQFEAEVAKFSNQF 116
>dbj|BAJ85721.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518464|dbj|BAJ88261.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|326525789|dbj|BAJ88941.1|
predicted protein [Hordeum vulgare subsp. vulgare]
Length = 119
Score = 203 bits (516), Expect = 6e-50
Identities = 99/114 (86%), Positives = 104/114 (91%)
Frame = -2
Query: 691 MNAPDRYERFVVPEGVKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPTVLFAG 512
MNAPDRYERFVVPEG KKVS+E+DTKI+NAASFTIEREDHTIGNILRMQLHRDP V FAG
Sbjct: 1 MNAPDRYERFVVPEGTKKVSFEKDTKIMNAASFTIEREDHTIGNILRMQLHRDPNVHFAG 60
Query: 511 YKLPHPLQYKILVRIHTTSQSSPTQAYNQAINDLDKELDGLKSAFEAEVTRFSS 350
YKLPHPLQYKI+VRIHT SQSSPTQAY QAINDLDKEL+ LK AFE E TRF S
Sbjct: 61 YKLPHPLQYKIIVRIHTASQSSPTQAYTQAINDLDKELENLKQAFEDEKTRFES 114