BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00014143
         (2059 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinac...  1131   0.0  
emb|CBI40152.3| unnamed protein product [Vitis vinifera]              863   0.0  
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...   863   0.0  
gb|EMJ20080.1| hypothetical protein PRUPE_ppa000088mg [Prunus pe...   837   0.0  
gb|EOY19811.1| DNA-directed RNA polymerase E subunit 1, putative...   823   0.0  
gb|EOY19809.1| DNA-directed RNA polymerase E subunit 1, putative...   823   0.0  
ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub...   821   0.0  
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub...   808   0.0  
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr...   805   0.0  
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub...   803   0.0  
ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   795   0.0  
gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus no...   793   0.0  
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   790   0.0  
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu...   781   0.0  
gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycope...   781   0.0  
ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E sub...   778   0.0  
ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub...   760   0.0  
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V sub...   756   0.0  
gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlise...   747   0.0  
ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicag...   741   0.0  

>gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea]
          Length = 1902

 Score = 1131 bits (2926), Expect = 0.0
 Identities = 556/675 (82%), Positives = 611/675 (90%)
 Frame = -1

Query: 2056 DFFYPISDLKDMQIDIQDXXXXXXXXXXXFNELVQLQFEAHIKQLKLPIASFILKSSALG 1877
            DFF+P S+L+++Q +IQD           FNELVQ+QFE HI++ K P+ +FIL SSALG
Sbjct: 424  DFFFPKSELQNIQRNIQDLSPLLLQLRSSFNELVQVQFENHIREFKSPVGNFILISSALG 483

Query: 1876 NLIDSRSDSAINKIVEQIGFLGLQLSDKRKFYSRGLVEEVATLFRQKYPFVSKYPSEEFG 1697
            ++IDSRSDSAI+KIV+QIGFLGLQLSD+RKFYSRGLVE+VA+LF QKYPF   YPSEEFG
Sbjct: 484  SMIDSRSDSAIDKIVQQIGFLGLQLSDRRKFYSRGLVEDVASLFHQKYPFADVYPSEEFG 543

Query: 1696 FVTNCFFHGLDPYEEIVHAIATREVIVRSSKGLAEPGTLFKNLMAILRDVVVCYDGTVRN 1517
            FV+ CFFHGLDPYEEIVH+IATREVIVRSSKGLAEPGTLFKNLMA+LRDVV+CYDGTVRN
Sbjct: 544  FVSRCFFHGLDPYEEIVHSIATREVIVRSSKGLAEPGTLFKNLMAVLRDVVICYDGTVRN 603

Query: 1516 ISSNSIIQFEYGVGGMPSQILFAPGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKE 1337
            ISSNS+IQFEYGVGGM SQ LF  G+PVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKE
Sbjct: 604  ISSNSVIQFEYGVGGMQSQNLFPAGDPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKE 663

Query: 1336 ILFCRTNFRNDLNDRRVILYLKDCCCGRKYCQENASCLVKNHLKKVSLRDAAVELSIEYK 1157
            ILFCR NFRND+NDRRVILYL DCCCGRKYCQENASCLVKNHLKKVSLRDAA+EL+IEYK
Sbjct: 664  ILFCRANFRNDINDRRVILYLNDCCCGRKYCQENASCLVKNHLKKVSLRDAAIELAIEYK 723

Query: 1156 RPKFEPESCEIDTGLVGHIHLNAVLLKESGIGVNDILLKCEEQVNLLRKKKKHGYFFKRI 977
            RPK EPESCEID GLVGHIHLN+ LLK SGIG++DIL KCEEQVNLLRKKKK+GY FKRI
Sbjct: 724  RPKLEPESCEIDAGLVGHIHLNSGLLKASGIGMHDILQKCEEQVNLLRKKKKYGYHFKRI 783

Query: 976  LLSVSECCFFKHSGSRWTDMPCLKFFWQEQDLSDSHLERTKHIMADMICPALLDTIIKGD 797
            LLSVS+CCFF HS S+WTDMPCLKFFW  QD++D+ LERTKHIMADMICP LLDTIIKGD
Sbjct: 784  LLSVSDCCFFNHSDSKWTDMPCLKFFW--QDMTDTDLERTKHIMADMICPVLLDTIIKGD 841

Query: 796  PRISTVNIIWINPGTTTWVQSPCSDGKGELAVEVTLEKEAVRHNGDAWRIVLDCCLPVFH 617
            PRISTVNIIWINPGTTTWVQSPCS  KGELAVEV LEKEAVR  GDAWRIVLDCCLPVFH
Sbjct: 842  PRISTVNIIWINPGTTTWVQSPCSSTKGELAVEVALEKEAVRLTGDAWRIVLDCCLPVFH 901

Query: 616  LIDSTRSIPYAIKQIEDLFGVSSAFDQAIQRLSTSVAKVTKDVLKEHLLLLASSMTCSGN 437
            LID+ RSIPYAIKQI+DLFG+S AFDQA+QRLSTSV  VTK VLKEHLLLLASSMTC+GN
Sbjct: 902  LIDTRRSIPYAIKQIQDLFGISCAFDQAVQRLSTSVTMVTKGVLKEHLLLLASSMTCAGN 961

Query: 436  LVGFNMGGIKALCRALNVKVPFTEATLYTPRKCFERASEKRHMDTLASIVGSCSWGKRVA 257
            LVGFN  GIKALCRALNV+VPFTEATLYTPRKCFERASEK H+DTLASIVGSCSWGKRV+
Sbjct: 962  LVGFNTSGIKALCRALNVQVPFTEATLYTPRKCFERASEKCHVDTLASIVGSCSWGKRVS 1021

Query: 256  LGTGAKFDVLWDTEEIGMTDKPIDVYNFLHLVSCSNEEEMDTGCLGEDIENFDSEDVYKE 77
            +GTGAKFD+LW+T+EI M DKP DVYNFLHLVS +NEEE+D+G LGEDIE+F+ +DVY E
Sbjct: 1022 IGTGAKFDLLWETKEIEMADKPTDVYNFLHLVSSANEEEVDSGGLGEDIESFE-KDVYME 1080

Query: 76   HDRSPEQENKAVFED 32
               SPEQENKAVFE+
Sbjct: 1081 PALSPEQENKAVFEE 1095


>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score =  863 bits (2229), Expect = 0.0
 Identities = 438/684 (64%), Positives = 530/684 (77%), Gaps = 8/684 (1%)
 Frame = -1

Query: 2059 DDFFYPISDLKDMQIDIQDXXXXXXXXXXXFNELVQLQFEAHIKQLKLPIASFILKSSAL 1880
            +DF  P    +++Q +++D           +NEL+QLQ E H++  K+P+A+FIL SSAL
Sbjct: 682  EDFSIPSEVTQNIQKNVEDISSLLYNLRSMYNELLQLQAENHLRLTKVPVANFILNSSAL 741

Query: 1879 GNLIDSRSDSAINKIVEQIGFLGLQLSDKRKFYSRGLVEEVATLFRQKYPFV-SKYPSEE 1703
            GNLIDS+SDSAINK+V+QIGFLG QLS+K KFYSR LVE +A LF+ KYPF  + YPS E
Sbjct: 742  GNLIDSKSDSAINKVVQQIGFLGQQLSEKGKFYSRTLVEGMAYLFKSKYPFHGADYPSGE 801

Query: 1702 FGFVTNCFFHGLDPYEEIVHAIATREVIVRSSKGLAEPGTLFKNLMAILRDVVVCYDGTV 1523
            FG + +CFFHGLDPYEE+VH+I+TRE+IVRSS+GL+EPGTLFKNLMAILRDVV+CYDGTV
Sbjct: 802  FGLIRSCFFHGLDPYEEMVHSISTREIIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTV 861

Query: 1522 RNISSNSIIQFEYGVGGMPS-QILFAPGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDM 1346
            RN+ SNSIIQFEYGV      Q  F  GEPVGVLAATAMSNPAYKAVLDSSP+SNSSW++
Sbjct: 862  RNVCSNSIIQFEYGVKARTKPQHFFPAGEPVGVLAATAMSNPAYKAVLDSSPSSNSSWEL 921

Query: 1345 MKEILFCRTNFRNDLNDRRVILYLKDCCCGRKYCQENASCLVKNHLKKVSLRDAAVELSI 1166
            MKEIL C+ NF+NDL DRRVILYL DC CGRKYC+ENA+ LVKN LKK SL+D AVE  I
Sbjct: 922  MKEILLCQVNFKNDLIDRRVILYLNDCDCGRKYCRENAAYLVKNQLKKASLKDTAVEFMI 981

Query: 1165 EYKRPKFEPESCEIDTGLVGHIHLNAVLLKESGIGVNDILLKCEEQVNLLRKKKKHGYFF 986
            EY +      S E  TGLVGHIHLN +LL++  + + ++  KCEE +N  RKKK  G FF
Sbjct: 982  EYVKQHAVSGSSEPGTGLVGHIHLNKLLLQDLNVSMQEVCQKCEETINSFRKKKNVGPFF 1041

Query: 985  KRILLSVSECCFFKHS-GSRWTDMPCLKFFWQEQDLSDSHLERTKHIMADMICPALLDTI 809
            K+I+LS  ECC F+HS  S+ +DMPCL FFWQ     D +LE+  HI+A  ICP LL TI
Sbjct: 1042 KKIILSFRECCTFQHSCQSKGSDMPCLLFFWQGN--RDDNLEQILHILAHKICPVLLQTI 1099

Query: 808  IKGDPRISTVNIIWINPGTTTWVQSPCSDGKGELAVEVTLEKEAVRHNGDAWRIVLDCCL 629
            IKGD R+ TVNIIWI+P TTTW+++PC   KGELA+++ LEK AV+  GDAWRIVLD CL
Sbjct: 1100 IKGDSRVCTVNIIWISPDTTTWIRNPCKSRKGELALDIVLEKAAVKQRGDAWRIVLDACL 1159

Query: 628  PVFHLIDSTRSIPYAIKQIEDLFGVSSAFDQAIQRLSTSVAKVTKDVLKEHLLLLASSMT 449
            PV HLID+ RSIPYAIKQ+++L G+S AFDQA+QRLS SV  V K VLKEHL+LLA+SMT
Sbjct: 1160 PVLHLIDTRRSIPYAIKQVQELLGISCAFDQAVQRLSKSVTMVAKGVLKEHLILLANSMT 1219

Query: 448  CSGNLVGFNMGGIKALCRALNVKVPFTEATLYTPRKCFERASEKRHMDTLASIVGSCSWG 269
            C+GNL+GFN GG KAL RALN++VPFTEATL+TPRKCFE+ASEK H D+L+SIV SCSWG
Sbjct: 1220 CAGNLIGFNSGGYKALSRALNLQVPFTEATLFTPRKCFEKASEKCHTDSLSSIVASCSWG 1279

Query: 268  KRVALGTGAKFDVLWDTEEIG-MTDKPIDVYNFLHLV-SCSNEEEMDTGCLGEDIENFDS 95
            K V +GTG++FDVLWDT+EIG   D  ID+Y+FLHLV S S  +E DT CLG ++E+   
Sbjct: 1280 KHVTVGTGSRFDVLWDTKEIGPAQDGGIDIYSFLHLVRSGSYGKEPDTACLGAEVEDLIL 1339

Query: 94   EDVYKEHDRSPEQEN---KAVFED 32
            ED   E   SPE  +   K VFED
Sbjct: 1340 EDENLELGMSPEHSSNFEKPVFED 1363


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  863 bits (2229), Expect = 0.0
 Identities = 438/684 (64%), Positives = 530/684 (77%), Gaps = 8/684 (1%)
 Frame = -1

Query: 2059 DDFFYPISDLKDMQIDIQDXXXXXXXXXXXFNELVQLQFEAHIKQLKLPIASFILKSSAL 1880
            +DF  P    +++Q +++D           +NEL+QLQ E H++  K+P+A+FIL SSAL
Sbjct: 622  EDFSIPSEVTQNIQKNVEDISSLLYNLRSMYNELLQLQAENHLRLTKVPVANFILNSSAL 681

Query: 1879 GNLIDSRSDSAINKIVEQIGFLGLQLSDKRKFYSRGLVEEVATLFRQKYPFV-SKYPSEE 1703
            GNLIDS+SDSAINK+V+QIGFLG QLS+K KFYSR LVE +A LF+ KYPF  + YPS E
Sbjct: 682  GNLIDSKSDSAINKVVQQIGFLGQQLSEKGKFYSRTLVEGMAYLFKSKYPFHGADYPSGE 741

Query: 1702 FGFVTNCFFHGLDPYEEIVHAIATREVIVRSSKGLAEPGTLFKNLMAILRDVVVCYDGTV 1523
            FG + +CFFHGLDPYEE+VH+I+TRE+IVRSS+GL+EPGTLFKNLMAILRDVV+CYDGTV
Sbjct: 742  FGLIRSCFFHGLDPYEEMVHSISTREIIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTV 801

Query: 1522 RNISSNSIIQFEYGVGGMPS-QILFAPGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDM 1346
            RN+ SNSIIQFEYGV      Q  F  GEPVGVLAATAMSNPAYKAVLDSSP+SNSSW++
Sbjct: 802  RNVCSNSIIQFEYGVKARTKPQHFFPAGEPVGVLAATAMSNPAYKAVLDSSPSSNSSWEL 861

Query: 1345 MKEILFCRTNFRNDLNDRRVILYLKDCCCGRKYCQENASCLVKNHLKKVSLRDAAVELSI 1166
            MKEIL C+ NF+NDL DRRVILYL DC CGRKYC+ENA+ LVKN LKK SL+D AVE  I
Sbjct: 862  MKEILLCQVNFKNDLIDRRVILYLNDCDCGRKYCRENAAYLVKNQLKKASLKDTAVEFMI 921

Query: 1165 EYKRPKFEPESCEIDTGLVGHIHLNAVLLKESGIGVNDILLKCEEQVNLLRKKKKHGYFF 986
            EY +      S E  TGLVGHIHLN +LL++  + + ++  KCEE +N  RKKK  G FF
Sbjct: 922  EYVKQHAVSGSSEPGTGLVGHIHLNKLLLQDLNVSMQEVCQKCEETINSFRKKKNVGPFF 981

Query: 985  KRILLSVSECCFFKHS-GSRWTDMPCLKFFWQEQDLSDSHLERTKHIMADMICPALLDTI 809
            K+I+LS  ECC F+HS  S+ +DMPCL FFWQ     D +LE+  HI+A  ICP LL TI
Sbjct: 982  KKIILSFRECCTFQHSCQSKGSDMPCLLFFWQGN--RDDNLEQILHILAHKICPVLLQTI 1039

Query: 808  IKGDPRISTVNIIWINPGTTTWVQSPCSDGKGELAVEVTLEKEAVRHNGDAWRIVLDCCL 629
            IKGD R+ TVNIIWI+P TTTW+++PC   KGELA+++ LEK AV+  GDAWRIVLD CL
Sbjct: 1040 IKGDSRVCTVNIIWISPDTTTWIRNPCKSRKGELALDIVLEKAAVKQRGDAWRIVLDACL 1099

Query: 628  PVFHLIDSTRSIPYAIKQIEDLFGVSSAFDQAIQRLSTSVAKVTKDVLKEHLLLLASSMT 449
            PV HLID+ RSIPYAIKQ+++L G+S AFDQA+QRLS SV  V K VLKEHL+LLA+SMT
Sbjct: 1100 PVLHLIDTRRSIPYAIKQVQELLGISCAFDQAVQRLSKSVTMVAKGVLKEHLILLANSMT 1159

Query: 448  CSGNLVGFNMGGIKALCRALNVKVPFTEATLYTPRKCFERASEKRHMDTLASIVGSCSWG 269
            C+GNL+GFN GG KAL RALN++VPFTEATL+TPRKCFE+ASEK H D+L+SIV SCSWG
Sbjct: 1160 CAGNLIGFNSGGYKALSRALNLQVPFTEATLFTPRKCFEKASEKCHTDSLSSIVASCSWG 1219

Query: 268  KRVALGTGAKFDVLWDTEEIG-MTDKPIDVYNFLHLV-SCSNEEEMDTGCLGEDIENFDS 95
            K V +GTG++FDVLWDT+EIG   D  ID+Y+FLHLV S S  +E DT CLG ++E+   
Sbjct: 1220 KHVTVGTGSRFDVLWDTKEIGPAQDGGIDIYSFLHLVRSGSYGKEPDTACLGAEVEDLIL 1279

Query: 94   EDVYKEHDRSPEQEN---KAVFED 32
            ED   E   SPE  +   K VFED
Sbjct: 1280 EDENLELGMSPEHSSNFEKPVFED 1303


>gb|EMJ20080.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
          Length = 1855

 Score =  837 bits (2161), Expect = 0.0
 Identities = 428/695 (61%), Positives = 522/695 (75%), Gaps = 12/695 (1%)
 Frame = -1

Query: 2059 DDFFYPISDLKDMQIDIQDXXXXXXXXXXXFNELVQLQFEAHIKQLKLPIASFILKSSAL 1880
            +DF+   + ++D+Q +IQD           +NE V+ Q +  I+ +K+P++ FIL+SSAL
Sbjct: 625  EDFYMSRTSIQDIQKNIQDSSDLLYHLRSTYNEFVEFQLQNRIRSVKVPVSHFILESSAL 684

Query: 1879 GNLIDSRSDSAINKIVEQIGFLGLQLSDKRKFYSRGLVEEVATLFRQKYPFVSKYPSEEF 1700
            G+LIDS+SDSAINKIV+QIGFLGLQLSDK +FYS+ LVE+VA+L   KYP    YPS E+
Sbjct: 685  GDLIDSKSDSAINKIVQQIGFLGLQLSDKGRFYSKTLVEDVASLCHSKYPSDIDYPSAEY 744

Query: 1699 GFVTNCFFHGLDPYEEIVHAIATREVIVRSSKGLAEPGTLFKNLMAILRDVVVCYDGTVR 1520
            G V +CFFHGLDPYE IVH+IATREVIVRSS+GL+EPGTLFKNLMAILRDVV+CYDGTVR
Sbjct: 745  GLVQSCFFHGLDPYEAIVHSIATREVIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVR 804

Query: 1519 NISSNSIIQFEYGVG-GMPSQILFAPGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMM 1343
            N+ SNSIIQFEYGV  G   Q LF  GEPVGVLAATAMSNPAYKAVLDS+P+SNSSW++M
Sbjct: 805  NVCSNSIIQFEYGVNIGSRPQHLFPAGEPVGVLAATAMSNPAYKAVLDSTPSSNSSWELM 864

Query: 1342 KEILFCRTNFRNDLNDRRVILYLKDCCCGRKYCQENASCLVKNHLKKVSLRDAAVELSIE 1163
            KEIL C+ NF+N+L DRRVILYL +C CGRKYC+E A+CLVKN LKKVSL+D AVE  IE
Sbjct: 865  KEILLCKVNFKNELIDRRVILYLNNCGCGRKYCRERAACLVKNQLKKVSLKDTAVEFMIE 924

Query: 1162 YKRPKFEPESCEIDTGLVGHIHLNAVLLKESGIGVNDILLKCEEQVNLLRKKK------K 1001
            Y        S   D GLVGHIHLN  +L+E  IGV+DIL KC+E +N  R+KK       
Sbjct: 925  YNNQLSGLGSLINDAGLVGHIHLNEDMLRELNIGVHDILQKCQETINSFRRKKVGKKKFN 984

Query: 1000 HGYFFKRILLSVSECCFFKHS-GSRWTDMPCLKFFWQEQDLSDSHLERTKHIMADMICPA 824
             GY FK  +L  SE C F HS   + +D PCL FF Q  D  D     T    AD+ICP 
Sbjct: 985  IGYHFKNTVLFASEHCSFHHSCAEKRSDSPCLMFFLQATD--DLETTTTLQYYADLICPV 1042

Query: 823  LLDTIIKGDPRISTVNIIWINPGTTTWVQSPCSDGKGELAVEVTLEKEAVRHNGDAWRIV 644
            LL+TIIKGDPRI + NIIWI+P TTTW++SP    KGE A+++ LEK  ++ +GDAWR V
Sbjct: 1043 LLETIIKGDPRIGSANIIWIDPDTTTWIRSPNKSQKGEWALDIVLEKSVIKQSGDAWRTV 1102

Query: 643  LDCCLPVFHLIDSTRSIPYAIKQIEDLFGVSSAFDQAIQRLSTSVAKVTKDVLKEHLLLL 464
            LD CLPV HLID+ RSIPYAIKQI++L GVS AFDQA+QRLST+V  V K VLKEHL+LL
Sbjct: 1103 LDSCLPVLHLIDTRRSIPYAIKQIQELLGVSCAFDQAVQRLSTAVTMVAKGVLKEHLILL 1162

Query: 463  ASSMTCSGNLVGFNMGGIKALCRALNVKVPFTEATLYTPRKCFERASEKRHMDTLASIVG 284
            A+SMTC+GN VGFN  G KAL RALN++VPFTEATL+TPRKCFERA+EK HMD+LASIV 
Sbjct: 1163 ANSMTCAGNFVGFNSSGYKALSRALNIQVPFTEATLFTPRKCFERAAEKCHMDSLASIVA 1222

Query: 283  SCSWGKRVALGTGAKFDVLWDTEEIGMTDK-PIDVYNFLHLVSCSNEEEMDTGCLGEDIE 107
            SCSWGK VA+GTG +FDVLWDT E+ +T +  +DV+NFLH+VS +N EE  TG LG +++
Sbjct: 1223 SCSWGKHVAVGTGVRFDVLWDTREVELTQEGGLDVFNFLHMVSTANVEEATTGALGAEVD 1282

Query: 106  NFDSEDVYKEHDRSPEQE---NKAVFEDVYKEHDR 11
            +    D   +   SPE     ++ VFED+ +  D+
Sbjct: 1283 DLMLVDEMADSSFSPELNSSFDRPVFEDLVEFDDK 1317


>gb|EOY19811.1| DNA-directed RNA polymerase E subunit 1, putative isoform 3
            [Theobroma cacao]
          Length = 1675

 Score =  823 bits (2125), Expect = 0.0
 Identities = 417/682 (61%), Positives = 521/682 (76%), Gaps = 6/682 (0%)
 Frame = -1

Query: 2059 DDFFYPISDLKDMQIDIQDXXXXXXXXXXXFNELVQLQFEAHIKQLKLPIASFILKSSAL 1880
            +DF      ++++Q DIQD           +NELV LQ E HI+  K P+A+FIL SSAL
Sbjct: 623  EDFSVSREVIQNIQKDIQDISPLLYQLRSTYNELVGLQMENHIRVAKAPVANFILNSSAL 682

Query: 1879 GNLIDSRSDSAINKIVEQIGFLGLQLSDKRKFYSRGLVEEVATLFRQKYPFVS-KYPSEE 1703
            G+LIDS+SDS +NK+V+QIGFLGLQLS+K KFYS+ LVE+VA  F+  YP     YPS E
Sbjct: 683  GDLIDSKSDSTVNKVVQQIGFLGLQLSNKGKFYSKTLVEDVAYQFQSIYPSDGVDYPSAE 742

Query: 1702 FGFVTNCFFHGLDPYEEIVHAIATREVIVRSSKGLAEPGTLFKNLMAILRDVVVCYDGTV 1523
            FG + +CFFHGLDPYE +VH+I+TREVIVRSS+GL+EPGTLFKNLMAILRDVV+CYDGTV
Sbjct: 743  FGLIKSCFFHGLDPYEGMVHSISTREVIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTV 802

Query: 1522 RNISSNSIIQFEYGVGGMPSQILFAPGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMM 1343
            RNISSNSIIQF+YG+    ++  F  GEPVGVLAATAMSNPAYKAVLDS+P+SNSSW++M
Sbjct: 803  RNISSNSIIQFQYGLNAR-TKPQFPAGEPVGVLAATAMSNPAYKAVLDSTPSSNSSWELM 861

Query: 1342 KEILFCRTNFRNDLNDRRVILYLKDCCCGRKYCQENASCLVKNHLKKVSLRDAAVELSIE 1163
            KEIL C+ + +NDL DRRVILYLKDC CGRKYCQENA+ LVKNHL+KV L+D AVEL  E
Sbjct: 862  KEILLCKVSLKNDLVDRRVILYLKDCDCGRKYCQENAAYLVKNHLRKVKLKDTAVELIFE 921

Query: 1162 YKRPKFEPESCEIDTGLVGHIHLNAVLLKESGIGVNDILLKCEEQVNLLRKKKKHGYFFK 983
            YK+ +   ES   + GLVGHI LN  +LKE  I + ++ +KC+E +   RKKKK    FK
Sbjct: 922  YKQQQTVSES---EAGLVGHILLNKAVLKELNISMQEVHMKCQETIISFRKKKKTADTFK 978

Query: 982  RILLSVSECCFFKHS-GSRWTDMPCLKFFWQEQDLSDSHLERTKHIMADMICPALLDTII 806
            R  L  SECC  + S G +W DM CL FF +  +  D HL+ T   + D+I P LL+T+I
Sbjct: 979  RTDLFFSECCSIQQSCGGKWLDMSCLMFFCR--NTKDDHLDCTLQDLVDIIYPVLLETVI 1036

Query: 805  KGDPRISTVNIIWINPGTTTWVQSPCSDGKGELAVEVTLEKEAVRHNGDAWRIVLDCCLP 626
            KGDPRI + NIIW++P TTTW++SP    KGELA++V LEK AV+ NGDAWR V+DCCLP
Sbjct: 1037 KGDPRICSANIIWVSPDTTTWIRSPSKTQKGELALDVVLEKSAVKQNGDAWRTVIDCCLP 1096

Query: 625  VFHLIDSTRSIPYAIKQIEDLFGVSSAFDQAIQRLSTSVAKVTKDVLKEHLLLLASSMTC 446
            V +LID+ RSIPYAIKQ+++L G+S AF+QA+QRLSTSV+ V + VLKEHL+LLA+SMTC
Sbjct: 1097 VINLIDTQRSIPYAIKQVQELLGISCAFEQAVQRLSTSVSMVARGVLKEHLILLANSMTC 1156

Query: 445  SGNLVGFNMGGIKALCRALNVKVPFTEATLYTPRKCFERASEKRHMDTLASIVGSCSWGK 266
            +GNL+GFN GG KAL R+LN++VPF+EATL+TPRKCFERA+EK H+D+L+SIV SCSWGK
Sbjct: 1157 AGNLIGFNSGGYKALSRSLNIQVPFSEATLFTPRKCFERAAEKCHVDSLSSIVASCSWGK 1216

Query: 265  RVALGTGAKFDVLWDTEEIGMTDKP-IDVYNFLHLVSCSNEEEMDTGCLGEDIENFDSED 89
             VA+GTG++FDVLWD +E+G   K  IDVYNFLH++S ++     T CLGE++++    D
Sbjct: 1217 HVAVGTGSRFDVLWDRKEVGFDQKSGIDVYNFLHMLSSASGPSSTTTCLGEEVDDLMDVD 1276

Query: 88   VYKEHDRSPEQEN---KAVFED 32
               E   SPE  N   K VFED
Sbjct: 1277 NMAEWSLSPEHSNGLDKPVFED 1298


>gb|EOY19809.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
            [Theobroma cacao] gi|508727913|gb|EOY19810.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao]
          Length = 1788

 Score =  823 bits (2125), Expect = 0.0
 Identities = 417/682 (61%), Positives = 521/682 (76%), Gaps = 6/682 (0%)
 Frame = -1

Query: 2059 DDFFYPISDLKDMQIDIQDXXXXXXXXXXXFNELVQLQFEAHIKQLKLPIASFILKSSAL 1880
            +DF      ++++Q DIQD           +NELV LQ E HI+  K P+A+FIL SSAL
Sbjct: 623  EDFSVSREVIQNIQKDIQDISPLLYQLRSTYNELVGLQMENHIRVAKAPVANFILNSSAL 682

Query: 1879 GNLIDSRSDSAINKIVEQIGFLGLQLSDKRKFYSRGLVEEVATLFRQKYPFVS-KYPSEE 1703
            G+LIDS+SDS +NK+V+QIGFLGLQLS+K KFYS+ LVE+VA  F+  YP     YPS E
Sbjct: 683  GDLIDSKSDSTVNKVVQQIGFLGLQLSNKGKFYSKTLVEDVAYQFQSIYPSDGVDYPSAE 742

Query: 1702 FGFVTNCFFHGLDPYEEIVHAIATREVIVRSSKGLAEPGTLFKNLMAILRDVVVCYDGTV 1523
            FG + +CFFHGLDPYE +VH+I+TREVIVRSS+GL+EPGTLFKNLMAILRDVV+CYDGTV
Sbjct: 743  FGLIKSCFFHGLDPYEGMVHSISTREVIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTV 802

Query: 1522 RNISSNSIIQFEYGVGGMPSQILFAPGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMM 1343
            RNISSNSIIQF+YG+    ++  F  GEPVGVLAATAMSNPAYKAVLDS+P+SNSSW++M
Sbjct: 803  RNISSNSIIQFQYGLNAR-TKPQFPAGEPVGVLAATAMSNPAYKAVLDSTPSSNSSWELM 861

Query: 1342 KEILFCRTNFRNDLNDRRVILYLKDCCCGRKYCQENASCLVKNHLKKVSLRDAAVELSIE 1163
            KEIL C+ + +NDL DRRVILYLKDC CGRKYCQENA+ LVKNHL+KV L+D AVEL  E
Sbjct: 862  KEILLCKVSLKNDLVDRRVILYLKDCDCGRKYCQENAAYLVKNHLRKVKLKDTAVELIFE 921

Query: 1162 YKRPKFEPESCEIDTGLVGHIHLNAVLLKESGIGVNDILLKCEEQVNLLRKKKKHGYFFK 983
            YK+ +   ES   + GLVGHI LN  +LKE  I + ++ +KC+E +   RKKKK    FK
Sbjct: 922  YKQQQTVSES---EAGLVGHILLNKAVLKELNISMQEVHMKCQETIISFRKKKKTADTFK 978

Query: 982  RILLSVSECCFFKHS-GSRWTDMPCLKFFWQEQDLSDSHLERTKHIMADMICPALLDTII 806
            R  L  SECC  + S G +W DM CL FF +  +  D HL+ T   + D+I P LL+T+I
Sbjct: 979  RTDLFFSECCSIQQSCGGKWLDMSCLMFFCR--NTKDDHLDCTLQDLVDIIYPVLLETVI 1036

Query: 805  KGDPRISTVNIIWINPGTTTWVQSPCSDGKGELAVEVTLEKEAVRHNGDAWRIVLDCCLP 626
            KGDPRI + NIIW++P TTTW++SP    KGELA++V LEK AV+ NGDAWR V+DCCLP
Sbjct: 1037 KGDPRICSANIIWVSPDTTTWIRSPSKTQKGELALDVVLEKSAVKQNGDAWRTVIDCCLP 1096

Query: 625  VFHLIDSTRSIPYAIKQIEDLFGVSSAFDQAIQRLSTSVAKVTKDVLKEHLLLLASSMTC 446
            V +LID+ RSIPYAIKQ+++L G+S AF+QA+QRLSTSV+ V + VLKEHL+LLA+SMTC
Sbjct: 1097 VINLIDTQRSIPYAIKQVQELLGISCAFEQAVQRLSTSVSMVARGVLKEHLILLANSMTC 1156

Query: 445  SGNLVGFNMGGIKALCRALNVKVPFTEATLYTPRKCFERASEKRHMDTLASIVGSCSWGK 266
            +GNL+GFN GG KAL R+LN++VPF+EATL+TPRKCFERA+EK H+D+L+SIV SCSWGK
Sbjct: 1157 AGNLIGFNSGGYKALSRSLNIQVPFSEATLFTPRKCFERAAEKCHVDSLSSIVASCSWGK 1216

Query: 265  RVALGTGAKFDVLWDTEEIGMTDKP-IDVYNFLHLVSCSNEEEMDTGCLGEDIENFDSED 89
             VA+GTG++FDVLWD +E+G   K  IDVYNFLH++S ++     T CLGE++++    D
Sbjct: 1217 HVAVGTGSRFDVLWDRKEVGFDQKSGIDVYNFLHMLSSASGPSSTTTCLGEEVDDLMDVD 1276

Query: 88   VYKEHDRSPEQEN---KAVFED 32
               E   SPE  N   K VFED
Sbjct: 1277 NMAEWSLSPEHSNGLDKPVFED 1298


>ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria
            vesca subsp. vesca]
          Length = 1991

 Score =  821 bits (2121), Expect = 0.0
 Identities = 414/694 (59%), Positives = 533/694 (76%), Gaps = 12/694 (1%)
 Frame = -1

Query: 2059 DDFFYPISDLKDMQIDIQDXXXXXXXXXXXFNELVQLQFEAHIKQLKLPIASFILKSSAL 1880
            +DF  P + ++D+Q  +++           +NELV++Q E HI+++K P+++FIL SSAL
Sbjct: 621  EDFALPRASIQDIQKGLKEISPLLFHMRTVYNELVEMQLENHIRKVKEPVSNFILNSSAL 680

Query: 1879 GNLIDSRSDSAINKIVEQIGFLGLQLSDKRKFYSRGLVEEVATLFRQKYPF-VSKYPSEE 1703
            G+LIDS+SDSA+NK+V+Q+GFLG QL D+ K YS+ LVE+V++L++ KYP  +  YPS E
Sbjct: 681  GDLIDSKSDSAMNKVVQQVGFLGRQLYDQGKLYSKTLVEDVSSLYQNKYPSDIVDYPSAE 740

Query: 1702 FGFVTNCFFHGLDPYEEIVHAIATREVIVRSSKGLAEPGTLFKNLMAILRDVVVCYDGTV 1523
            FG V   F HGLDP E ++H+IATREVIVRSS+GL+EPGTLFKNLMA LRDVV+CYDGTV
Sbjct: 741  FGLVHRGFVHGLDPVEGMIHSIATREVIVRSSRGLSEPGTLFKNLMATLRDVVICYDGTV 800

Query: 1522 RNISSNSIIQFEYGV-GGMPSQILFAPGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDM 1346
            RN+ SNSIIQFEYGV  G   + LF  GEPVGVLAATAMSNPAYKAVLDS+P+SNSSWD+
Sbjct: 801  RNVCSNSIIQFEYGVKSGSGPENLFPAGEPVGVLAATAMSNPAYKAVLDSTPSSNSSWDL 860

Query: 1345 MKEILFCRTNFRNDLNDRRVILYLKDCCCGRKYCQENASCLVKNHLKKVSLRDAAVELSI 1166
            MKEIL C+ NF+N+L DRRV+LYL DC CGRKYC+E+A+ LVKN LKKVSL+D AVE  I
Sbjct: 861  MKEILLCKVNFKNELIDRRVVLYLNDCGCGRKYCREHAAYLVKNRLKKVSLKDTAVEFMI 920

Query: 1165 EYKRPKFEPESCEIDTGLVGHIHLNAVLLKESGIGVNDILLKCEEQVNLLRKKK-----K 1001
            EY++ +    S EID+GLVGH+HLN +LL+E  +G+++IL KCEE +N  R+KK      
Sbjct: 921  EYQKER-AAGSMEIDSGLVGHVHLNEMLLRELNLGMSEILQKCEETINSFRRKKVGKKMN 979

Query: 1000 HGYFFKRILLSVSECC-FFKHSGSRWTDMPCLKFFWQEQDLSDSHLERTKHIMADMICPA 824
             G  FKR +LS SECC F + S    +  PCL FF+Q  D ++S LE    ++AD ICP 
Sbjct: 980  IGEIFKRTILSYSECCSFHQSSADNRSGSPCLMFFYQ--DFNNSELEAISQMLADFICPV 1037

Query: 823  LLDTIIKGDPRISTVNIIWINPGTTTWVQSPCSDGKGELAVEVTLEKEAVRHNGDAWRIV 644
            LL T+IKGDPRIS+ NIIWIN  +TTW++SP    KGELA++V LEK  V+ +GDAWRI 
Sbjct: 1038 LLKTVIKGDPRISSANIIWINSESTTWIRSPNKSLKGELALDVVLEKSVVKQSGDAWRIA 1097

Query: 643  LDCCLPVFHLIDSTRSIPYAIKQIEDLFGVSSAFDQAIQRLSTSVAKVTKDVLKEHLLLL 464
            LDCCLPV HLID+ RSIPYAIKQ+++L GVS AFDQA+QRL+ +VA V K VLKEHL+LL
Sbjct: 1098 LDCCLPVLHLIDTRRSIPYAIKQVQELLGVSCAFDQAVQRLAKAVAMVAKGVLKEHLILL 1157

Query: 463  ASSMTCSGNLVGFNMGGIKALCRALNVKVPFTEATLYTPRKCFERASEKRHMDTLASIVG 284
            A+SMTC+GN VGFN GG KAL RALN++VPFTEATL+TP+KCFERA+EK HMD+L+SIV 
Sbjct: 1158 ANSMTCAGNFVGFNPGGYKALSRALNIQVPFTEATLFTPKKCFERAAEKCHMDSLSSIVA 1217

Query: 283  SCSWGKRVALGTGAKFDVLWDTEEIGMTD-KPIDVYNFLHLVSCSNEEEMDTGCLGEDIE 107
            SCSWGK VA+GTG++F++LWDT+E G+ +   +DV+NFLH+V+ +N EE+ T  LG +I+
Sbjct: 1218 SCSWGKHVAVGTGSRFEILWDTKEGGLNEVGGVDVFNFLHMVNAANGEELTTAALGTEID 1277

Query: 106  NFDSEDVYKEHDRSPE---QENKAVFEDVYKEHD 14
            +   +    +   SPE     +K VFED+ +  D
Sbjct: 1278 DLVPDYENGDVSLSPEHNSSSDKPVFEDIVEFPD 1311


>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
            sativus]
          Length = 1959

 Score =  808 bits (2088), Expect = 0.0
 Identities = 408/684 (59%), Positives = 519/684 (75%), Gaps = 8/684 (1%)
 Frame = -1

Query: 2059 DDFFYPISDLKDMQIDIQDXXXXXXXXXXXFNELVQLQFEAHIKQLKLPIASFILKSSAL 1880
            DD+  P++ L+ +Q +IQ            FNELV+LQ E H++ +K+P  +FILK S+L
Sbjct: 622  DDYSMPMAFLQALQKNIQVLSPLLYQLRSTFNELVELQLENHLRSVKVPFTNFILKLSSL 681

Query: 1879 GNLIDSRSDSAINKIVEQIGFLGLQLSDKRKFYSRGLVEEVATLFRQKYPFVS-KYPSEE 1703
            G L DS+S+SAINK+V+QIGFLGLQLSDK +FYS+ L+E+VA+LF  +Y      YPS E
Sbjct: 682  GKLFDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLIEDVASLFHNRYSSDKIDYPSAE 741

Query: 1702 FGFVTNCFFHGLDPYEEIVHAIATREVIVRSSKGLAEPGTLFKNLMAILRDVVVCYDGTV 1523
            FG V  CFFHGLDPYEE+VH+I+TREV+VRSS+GL EPGTLFKNLMAILRDVV+CYDGTV
Sbjct: 742  FGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTV 801

Query: 1522 RNISSNSIIQFEYGV--GGMPSQILFAPGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWD 1349
            RN+ SNSIIQ EYG+  G M    LF PGEPVGVLAATAMS PAYKAVLDS+P+SNSSWD
Sbjct: 802  RNVCSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVLAATAMSTPAYKAVLDSTPSSNSSWD 861

Query: 1348 MMKEILFCRTNFRNDLNDRRVILYLKDCCCGRKYCQENASCLVKNHLKKVSLRDAAVELS 1169
            MMKEIL C+ +F+N+  DRRVILYL +C CGRKYC ENA+ +VK+HLKKV+L+DAA++  
Sbjct: 862  MMKEILLCKVSFKNEPIDRRVILYLNNCACGRKYCNENAAYVVKSHLKKVTLKDAAMDFM 921

Query: 1168 IEYKRPKFEPESCEIDTGLVGHIHLNAVLLKESGIGVNDILLKCEEQVNLLRKKKKHGYF 989
            IEY R   +P    +  GLVGH+HLN +LLKE  I + ++L +C+E ++  +KKKK    
Sbjct: 922  IEYNR---QPTPSGLGPGLVGHVHLNRMLLKELNIDMTEVLRRCQETMSSFKKKKKK--I 976

Query: 988  FKRILLSVSE-CCFFKHSGSRWTDMPCLKFFWQEQDLSDSHLERTKHIMADMICPALLDT 812
               +  S+SE C F + +G    DMPCL F+ Q +D+   HLERT HI+AD++ P L +T
Sbjct: 977  AHALRFSISEHCAFHQWNGEESIDMPCLIFWHQTRDV---HLERTAHILADIVFPLLSET 1033

Query: 811  IIKGDPRISTVNIIWINPGTTTWVQSPCSDGKGELAVEVTLEKEAVRHNGDAWRIVLDCC 632
            IIKGDPRI + ++IWI+P +T+W ++P     GELA++V LEK AV+ NGDAWR VLDCC
Sbjct: 1034 IIKGDPRIKSASVIWISPDSTSWQKNPSRWQDGELALDVCLEKSAVKQNGDAWRNVLDCC 1093

Query: 631  LPVFHLIDSTRSIPYAIKQIEDLFGVSSAFDQAIQRLSTSVAKVTKDVLKEHLLLLASSM 452
            LPV HLID+ RS+PYAIKQ+++L G+S AFDQ IQRLS SV+ V+K VL +HL+LLA+SM
Sbjct: 1094 LPVLHLIDTRRSVPYAIKQVQELLGISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSM 1153

Query: 451  TCSGNLVGFNMGGIKALCRALNVKVPFTEATLYTPRKCFERASEKRHMDTLASIVGSCSW 272
            TC+GN++GFN GG KAL RALN++VPFTEATL+TPRKCFE+A+EK H D+L+SIV SCSW
Sbjct: 1154 TCTGNMIGFNSGGYKALSRALNIQVPFTEATLFTPRKCFEKAAEKCHKDSLSSIVASCSW 1213

Query: 271  GKRVALGTGAKFDVLWDTEEIG-MTDKPIDVYNFLHLVSCSNEEEMDTGCLGEDIENFDS 95
            GK VA+GTG++FD+LWD +E+G   D  +DVYNFLH+V     EE  + CLGE+IE+   
Sbjct: 1214 GKHVAVGTGSRFDILWDQKELGCKQDDVVDVYNFLHMVRSGKSEEPTSACLGEEIEDIMV 1273

Query: 94   EDVYKEHDRSPE---QENKAVFED 32
            ED Y E   SPE      K VFED
Sbjct: 1274 EDEYGELTLSPEPFSTSEKPVFED 1297


>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
            gi|557522591|gb|ESR33958.1| hypothetical protein
            CICLE_v10004129mg [Citrus clementina]
          Length = 1867

 Score =  805 bits (2079), Expect = 0.0
 Identities = 409/689 (59%), Positives = 520/689 (75%), Gaps = 9/689 (1%)
 Frame = -1

Query: 2059 DDFFYPISDLKDMQIDIQDXXXXXXXXXXXFNELVQLQFEAHIKQLKLPIASFILKSSAL 1880
            +DF    + L ++Q +IQ             NELV LQ E HI+ +K+ +A FILKSS L
Sbjct: 624  EDFSLSKAALWNIQKEIQALYSLLYHRMSTQNELVDLQIENHIRHVKMLVAKFILKSSTL 683

Query: 1879 GNLIDSRSDSAINKIVEQIGFLGLQLSDKRKFYSRGLVEEVATLFRQKYPFVSKYPSEEF 1700
            G LIDS+SDSA++K+V+Q GFLGLQLSD+ KFYS+ LVE++A+ F + YP    YP+ ++
Sbjct: 684  GYLIDSKSDSAVSKVVQQAGFLGLQLSDRGKFYSKTLVEDIASHFERIYPMDLNYPTAKY 743

Query: 1699 GFVTNCFFHGLDPYEEIVHAIATREVIVRSSKGLAEPGTLFKNLMAILRDVVVCYDGTVR 1520
            G +  CFFHGLDPYEE+ H+I+TREVIVRSS+GL+EPGTLFKNLMA+LRDVV+CYDGTVR
Sbjct: 744  GLIKGCFFHGLDPYEEMTHSISTREVIVRSSRGLSEPGTLFKNLMAVLRDVVICYDGTVR 803

Query: 1519 NISSNSIIQFEYGVGGMPSQILFAPGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMK 1340
            N+ SNSIIQF+Y V    S  LF  GEPVGVLAATAMSNPAYKAVLDSSP+SN+SW++MK
Sbjct: 804  NVCSNSIIQFDYAVNARKSHSLFPAGEPVGVLAATAMSNPAYKAVLDSSPSSNNSWELMK 863

Query: 1339 EILFCRTNFRNDLNDRRVILYLKDCCCGRKYCQENASCLVKNHLKKVSLRDAAVELSIEY 1160
            EIL CR +F ND  DRRVILYL DC CGRKYCQE A+ +VKN LK+VSL+DAAVE  IEY
Sbjct: 864  EILLCRVSFNNDPIDRRVILYLNDCGCGRKYCQERAAYMVKNQLKRVSLKDAAVEFLIEY 923

Query: 1159 KRPKFEPESCEIDTGLVGHIHLNAVLLKESGIGVNDILLKCEEQVNLLRKKKKHG---YF 989
            K+    PE    D GLVGHIHLN +LL++  I ++DIL KC+E +    KKKK      F
Sbjct: 924  KK----PEIISDDEGLVGHIHLNKILLEDLRISMHDILPKCQETLKSFCKKKKMKKVVQF 979

Query: 988  FKRILLSVSECCFFKHS-GSRWTDMPCLKFFWQEQDLSDSHLERTKHIMADMICPALLDT 812
            FK   LS+SECC F+ S   + ++MPCL F    +  SDS+L++   ++A+MI P LL+T
Sbjct: 980  FKNTSLSISECCSFQQSCADKRSNMPCLMFVL--RGASDSYLDKLSGVLANMIYPVLLET 1037

Query: 811  IIKGDPRISTVNIIWINPGTTTWVQSPCSDGKGELAVEVTLEKEAVRHNGDAWRIVLDCC 632
            IIKGDPRI + NIIWI+P TT W+++P  + KGELA++V LEK  V+ +GDAWR VLD C
Sbjct: 1038 IIKGDPRICSANIIWISPDTTAWIRNPSKNRKGELALDVVLEKSVVKQSGDAWRTVLDSC 1097

Query: 631  LPVFHLIDSTRSIPYAIKQIEDLFGVSSAFDQAIQRLSTSVAKVTKDVLKEHLLLLASSM 452
            LPVFHLID+ RS+PYAIKQ+++L GVS AF+QA+QRLS SV  V K VLKEHL+LLA+SM
Sbjct: 1098 LPVFHLIDTRRSVPYAIKQVQELLGVSCAFEQAVQRLSASVTMVAKGVLKEHLILLANSM 1157

Query: 451  TCSGNLVGFNMGGIKALCRALNVKVPFTEATLYTPRKCFERASEKRHMDTLASIVGSCSW 272
            TC+G+LVGFN GG KAL R+LNV+VPFTEATL+ PRKCFE+A+EKRH D L+S+V +CSW
Sbjct: 1158 TCAGDLVGFNSGGYKALSRSLNVQVPFTEATLFMPRKCFEKAAEKRHTDNLSSVVAACSW 1217

Query: 271  GKRVALGTGAKFDVLWDTE-EIGMTDKPIDVYNFLHLV-SCSNEEEMDTGCLGEDIENFD 98
            GK VA+GTG++FD+LW TE E    D  +DVY+FLH+V S +  EE+DTGCLGE+++  +
Sbjct: 1218 GKHVAVGTGSRFDLLWQTENEEFNQDDGVDVYDFLHMVRSSTGIEELDTGCLGEEVDGLE 1277

Query: 97   SEDVYKEHDRSPEQ---ENKAVFEDVYKE 20
             E    +   SPE     +K +FED+ ++
Sbjct: 1278 DE---FDWSLSPEHNLCSDKPIFEDLVED 1303


>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
            sinensis]
          Length = 1865

 Score =  803 bits (2075), Expect = 0.0
 Identities = 411/689 (59%), Positives = 519/689 (75%), Gaps = 9/689 (1%)
 Frame = -1

Query: 2059 DDFFYPISDLKDMQIDIQDXXXXXXXXXXXFNELVQLQFEAHIKQLKLPIASFILKSSAL 1880
            +DF    + L ++Q +IQ             NELV LQ E HI+ +K+ +A FILKSS L
Sbjct: 623  EDFSLSKAALWNIQKEIQALYSLLYHRMSTQNELVDLQIENHIRHVKMLVAKFILKSSTL 682

Query: 1879 GNLIDSRSDSAINKIVEQIGFLGLQLSDKRKFYSRGLVEEVATLFRQKYPFVSKYPSEEF 1700
            G LIDS+SDSA++K+V+Q GFLGLQLSD+ KFYS+ LVE++A+ F + YP    YP+ ++
Sbjct: 683  GYLIDSKSDSAVSKVVQQAGFLGLQLSDRGKFYSKTLVEDIASHFERIYPMDLNYPTAKY 742

Query: 1699 GFVTNCFFHGLDPYEEIVHAIATREVIVRSSKGLAEPGTLFKNLMAILRDVVVCYDGTVR 1520
            G +  CFFHGLDPYEE+ H+I+TREVIVRSS+GL+EPGTLFKNLMA+LRDVV+CYDGTVR
Sbjct: 743  GLIKGCFFHGLDPYEEMTHSISTREVIVRSSRGLSEPGTLFKNLMAVLRDVVICYDGTVR 802

Query: 1519 NISSNSIIQFEYGVGGMPSQILFAPGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMK 1340
            N+ SNSIIQF+Y V    S  LF  GEPVGVLAATAMSNPAYKAVLDSSP+SN+SW++MK
Sbjct: 803  NVCSNSIIQFDYAVNARKSHSLFPAGEPVGVLAATAMSNPAYKAVLDSSPSSNNSWELMK 862

Query: 1339 EILFCRTNFRNDLNDRRVILYLKDCCCGRKYCQENASCLVKNHLKKVSLRDAAVELSIEY 1160
            EIL CR +F ND  DRRVILYL DC CGRKYCQE A+ +VKN LK+VSL+DAAVE  IEY
Sbjct: 863  EILLCRVSFNNDPIDRRVILYLNDCGCGRKYCQERAAYMVKNQLKRVSLKDAAVEFLIEY 922

Query: 1159 KRPKFEPESCEIDTGLVGHIHLNAVLLKESGIGVNDILLKCEEQVNLLRKKKKHG---YF 989
            K+    PE    D GLVGHIHLN +LL++  I ++DIL KC+E +    KKKK      F
Sbjct: 923  KK----PEIISDDEGLVGHIHLNKILLEDLRISMHDILPKCQETLKSFCKKKKMKKVVQF 978

Query: 988  FKRILLSVSECCFFKHS-GSRWTDMPCLKFFWQEQDLSDSHLERTKHIMADMICPALLDT 812
            FK   LSVSECC F+ S   + ++MPCL F    +  SDS+L++   ++A+MI P LL+T
Sbjct: 979  FKNTSLSVSECCSFQQSCADKRSNMPCLMFVL--RGASDSYLDKLSGVLANMIYPVLLET 1036

Query: 811  IIKGDPRISTVNIIWINPGTTTWVQSPCSDGKGELAVEVTLEKEAVRHNGDAWRIVLDCC 632
            IIKGDPRI + NIIWI+P TT W+++P  + KGELA++V LEK  V+ +GDAWR VLD C
Sbjct: 1037 IIKGDPRIYSANIIWISPDTTAWIRNPSKNRKGELALDVVLEKSVVKQSGDAWRTVLDSC 1096

Query: 631  LPVFHLIDSTRSIPYAIKQIEDLFGVSSAFDQAIQRLSTSVAKVTKDVLKEHLLLLASSM 452
            LPVFHLID+ RS+PYAIKQ+++L GVS AF+QA+QRLS SV  V K VLKEHL+LLA+SM
Sbjct: 1097 LPVFHLIDTRRSVPYAIKQVQELLGVSCAFEQAVQRLSASVTMVAKGVLKEHLILLANSM 1156

Query: 451  TCSGNLVGFNMGGIKALCRALNVKVPFTEATLYTPRKCFERASEKRHMDTLASIVGSCSW 272
            TC+G+LVGFN GG KAL R+LNV+VPFTEATL+TPRKCFE+A+EK H D L+S+V +CSW
Sbjct: 1157 TCAGDLVGFNSGGYKALSRSLNVQVPFTEATLFTPRKCFEKAAEKCHTDNLSSVVAACSW 1216

Query: 271  GKRVALGTGAKFDVLWDTE-EIGMTDKPIDVYNFLHLV-SCSNEEEMDTGCLGEDIENFD 98
            GK VA+GTG++FD+LW TE E    D  +DVY+FLH+V S +  EE DTGCLGE+++  +
Sbjct: 1217 GKHVAVGTGSRFDLLWQTENEEFNQDDGVDVYDFLHMVRSSTGIEESDTGCLGEEVDGLE 1276

Query: 97   SEDVYKEHDRSPEQ---ENKAVFEDVYKE 20
             E    +   SPE     +K VFED+ ++
Sbjct: 1277 DE---FDWSLSPEHNLCSDKPVFEDLVED 1302


>ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
            1 [Solanum lycopersicum]
          Length = 1632

 Score =  795 bits (2053), Expect = 0.0
 Identities = 397/658 (60%), Positives = 513/658 (77%), Gaps = 14/658 (2%)
 Frame = -1

Query: 1966 NELVQLQFEAHIKQLKLPIASFILKSSALGNLIDSRSDSAINKIVEQIGFLGLQLSDKRK 1787
            NE V++Q E H++  KLP+  F+LKSS +G LIDS+S+SA NK+V+QIGFLGLQ+SD+ K
Sbjct: 654  NESVEVQLEHHLRNEKLPVIDFVLKSSGMGVLIDSKSESAFNKVVQQIGFLGLQISDRGK 713

Query: 1786 FYSRGLVEEVATLFRQKYPFVSKYPSEEFGFVTNCFFHGLDPYEEIVHAIATREVIVRSS 1607
            FY++ LV ++A LF++KYP V   PSEEFG V +C F+GLDPY+ ++H+I++REVIVRS+
Sbjct: 714  FYTKTLVHDMAQLFQKKYPSVGTNPSEEFGLVRSCLFYGLDPYQGMIHSISSREVIVRST 773

Query: 1606 KGLAEPGTLFKNLMAILRDVVVCYDGTVRNISSNSIIQFEYGVGG---MPSQILFAPGEP 1436
            +GL EPGTLFKNLMAILRDVV+CYDGTVRN+SSNSIIQFEYG  G   +PS+  F  G+P
Sbjct: 774  RGLTEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFEYGSSGGSNLPSE--FCAGDP 831

Query: 1435 VGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKEILFCRTNFRNDLNDRRVILYLKDCCCG 1256
            VGVLAATAMSNPAYKAVLDSSP+SNSSW+MMKEIL C  +F+ND++DRRVILYL DC C 
Sbjct: 832  VGVLAATAMSNPAYKAVLDSSPSSNSSWEMMKEILLCGVSFKNDVSDRRVILYLNDCGCR 891

Query: 1255 RKYCQENASCLVKNHLKKVSLRDAAVELSIEYKRPKFEPESCEIDTGLVGHIHLNAVLLK 1076
            R YC+E A+ +VKNHL KV L+DAA E  IEY   +   E+ E  TGL+GHI LN   L+
Sbjct: 892  RGYCREKAAYVVKNHLSKVCLKDAADEFLIEYAGRQAGYENSETGTGLIGHIRLNQGQLE 951

Query: 1075 ESGIGVNDILLKCEEQVNLLRKKKKHGYFFKRILLSVSECCFFKH-SGSRWTDMPCLKFF 899
              GI V ++  +C+E ++  +KKKK G  FKRI+LSVSE C F H SGS+  + PCL+F 
Sbjct: 952  NLGISVLEVHERCQENISSFQKKKKIGNLFKRIVLSVSEFCSFCHNSGSKCLNAPCLRFS 1011

Query: 898  WQEQDLSDSHLERTKHIMADMICPALLDTIIKGDPRISTVNIIWINPGTTTWVQSPCSDG 719
            W   D SD HLER  HI+ADMICP LLDT+IKGDPR+S+ NI WI+P T +W++SP    
Sbjct: 1012 WP--DASDDHLERVSHILADMICPILLDTVIKGDPRVSSANIAWISPDTMSWIRSPSKSQ 1069

Query: 718  KGELAVEVTLEKEAVRHNGDAWRIVLDCCLPVFHLIDSTRSIPYAIKQIEDLFGVSSAFD 539
            +GELA+++ LEKEAV+  GDAWRI++D CLPV HLID+TRSIPYAIKQ+++L G+S AF+
Sbjct: 1070 RGELALDIVLEKEAVKQRGDAWRILMDSCLPVIHLIDTTRSIPYAIKQVQELIGISCAFE 1129

Query: 538  QAIQRLSTSVAKVTKDVLKEHLLLLASSMTCSGNLVGFNMGGIKALCRALNVKVPFTEAT 359
            QA++RLSTSV  VTK VLK+HL+LLA+SMTC+GNLVGFN GGIKAL R+LNV++PFTEAT
Sbjct: 1130 QAVKRLSTSVTMVTKGVLKDHLVLLANSMTCAGNLVGFNAGGIKALSRSLNVQIPFTEAT 1189

Query: 358  LYTPRKCFERASEKRHMDTLASIVGSCSWGKRVALGTGAKFDVLWDTEEIGMT-DKPIDV 182
            L+TPRKCFERA+EK H+D+L+SIV SCSWGK VA+GTG++F+VL +T  +        DV
Sbjct: 1190 LFTPRKCFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFEVLLNTRNVEWNIPDTRDV 1249

Query: 181  YNFLHLVSCSNEEEMD-TGCLGEDIENFDSED---VYKEHDRS-----PEQENKAVFE 35
            Y+FLHLV  ++ +E++ T CLG +I+  + ++   +Y   +R      P  E++A F+
Sbjct: 1250 YSFLHLVRNTSAQEVEGTSCLGAEIDELEEDEDMGLYLSPNRDSGSEMPTFEDRAEFD 1307


>gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus notabilis]
          Length = 2054

 Score =  793 bits (2048), Expect = 0.0
 Identities = 416/688 (60%), Positives = 521/688 (75%), Gaps = 4/688 (0%)
 Frame = -1

Query: 2059 DDFFYPISDLKDMQIDIQDXXXXXXXXXXXFNELVQLQFEAHIKQLKLPIASFILKSSAL 1880
            +DF      +K++  DIQ            +NELV+LQ E  I+  K P+ +FILKSS++
Sbjct: 626  EDFSISQEVIKNITKDIQLISPLLYHLRSTYNELVELQLENQIRFAKAPVTNFILKSSSM 685

Query: 1879 GNLIDSRSDSAINKIVEQIGFLGLQLSDKRKFYSRGLVEEVATLFRQKYPFVSKYPSEEF 1700
            GNLID +SDSAINK+V+QIGFLGLQ+SD+ KFYS+ LVE+V+ L+ +KYP    YPS E 
Sbjct: 686  GNLIDPKSDSAINKVVQQIGFLGLQISDRGKFYSKTLVEDVSCLYTRKYPENVDYPSAEH 745

Query: 1699 GFVTNCFFHGLDPYEEIVHAIATREVIVRSSKGLAEPGTLFKNLMAILRDVVVCYDGTVR 1520
            G + +CFFHGLDPYEEIVH+I+TREVIVRSS+GL EPGTLFKNLMAILRDVV+CYDGTVR
Sbjct: 746  GLIRSCFFHGLDPYEEIVHSISTREVIVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVR 805

Query: 1519 NISSNSIIQFEYGVGGMPSQILFAPGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMK 1340
            N+ SNSIIQFEYG G   ++ L+  GEPVGVLAATAMSNPAYKAVLDSSP+SNSSW++MK
Sbjct: 806  NVCSNSIIQFEYGRGS--ARNLYPAGEPVGVLAATAMSNPAYKAVLDSSPSSNSSWELMK 863

Query: 1339 EILFCRTNFRNDLNDRRVILYLKDCCCGRKYCQENASCLVKNHLKKVSLRDAAVELSIEY 1160
            EIL C+  FRN+L DRRVILYL  C CGRKYC+E A+ LV+N LKKVSL+D AVE  IEY
Sbjct: 864  EILLCKAIFRNELIDRRVILYLNHCGCGRKYCREQATYLVQNQLKKVSLKDTAVEFMIEY 923

Query: 1159 KRPKFEPESCEIDTGLVGHIHLNAVLLKESGIGVNDILLKCEEQVNLLRKKKKHGYFFKR 980
            K       + +++ GLVGHIHLN VLLKE  IG+N+IL KCEE +N +RKKK  G   K+
Sbjct: 924  KNQS-SFSAVDMNAGLVGHIHLNEVLLKEMDIGMNEILQKCEEAINSVRKKKL-GKHLKK 981

Query: 979  ILLSVSECCFFKHSGSRWT-DMPCLKFFWQEQDLSDSHLERTKHIMADMICPALLDTIIK 803
             +LSVSECC F  SG   T + PCL    +E +++D+ LE +  I+AD ICP LL+TIIK
Sbjct: 982  AVLSVSECCTFHKSGLDGTSEFPCLLISIRE-NMNDT-LEESSKILADSICPFLLETIIK 1039

Query: 802  GDPRISTVNIIWINPGTTTWVQSPCSDGKGELAVEVTLEKEAVRHNGDAWRIVLDCCLPV 623
            GD RIS+  I W++  TT+ ++SP +   GELAV+V L+K A++ +GDAWRIV+D CLPV
Sbjct: 1040 GDSRISSAKITWLSSDTTS-IRSPQNSDMGELAVDVVLDKSAIKRSGDAWRIVIDSCLPV 1098

Query: 622  FHLIDSTRSIPYAIKQIEDLFGVSSAFDQAIQRLSTSVAKVTKDVLKEHLLLLASSMTCS 443
             HLID+ RSIPY IKQI++L G+S AFDQA+QRLSTSV+ V+K VLKEHL+LLA+SMT +
Sbjct: 1099 LHLIDTRRSIPYGIKQIQELLGISCAFDQAVQRLSTSVSMVSKGVLKEHLILLANSMTYA 1158

Query: 442  GNLVGFNMGGIKALCRALNVKVPFTEATLYTPRKCFERASEKRHMDTLASIVGSCSWGKR 263
            GNL+GFN GG KAL R+LNV+VPFTEATL TP++CFERA+EK H+D+L SIV SCSWGK 
Sbjct: 1159 GNLIGFNSGGYKALTRSLNVQVPFTEATLITPKRCFERAAEKCHVDSLTSIVASCSWGKH 1218

Query: 262  VALGTGAKFDVLWDTEEIGMTDK-PIDVYNFLHLVSCSNEEEMDTGCLGEDIENFDSEDV 86
            VA+GTG++FD+LWDT ++       +DV NFLH+VS +  EE  T CLGE+I++    D 
Sbjct: 1219 VAVGTGSRFDILWDTRKVEFNQAGGVDVNNFLHMVSTAYGEEASTACLGEEIDDLMPGDD 1278

Query: 85   YKEHDRSPEQEN--KAVFEDVYKEHDRS 8
              E   SPE  N  + VFED+ +  D S
Sbjct: 1279 IAELCLSPENFNSDRPVFEDIDEFQDIS 1306


>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
            1-like [Cucumis sativus]
          Length = 2019

 Score =  790 bits (2039), Expect = 0.0
 Identities = 409/714 (57%), Positives = 519/714 (72%), Gaps = 38/714 (5%)
 Frame = -1

Query: 2059 DDFFYPISDLKDMQIDIQDXXXXXXXXXXXFNELVQLQFEAHIKQLKLPIASFILKSSAL 1880
            DD+  P++ L+ +Q +IQ            FNELV+LQ E H++ +K+P  +FILK S+L
Sbjct: 652  DDYSMPMAFLQALQKNIQVLSPLLYQLRSTFNELVELQLENHLRSVKVPFTNFILKLSSL 711

Query: 1879 GNLIDSRSDSAINKIVEQIGFLGLQLSDKRKFYSRGLVEEVATLFRQKYPFVS-KYPSEE 1703
            G L DS+S+SAINK+V+QIGFLGLQLSDK +FYS+ L+E+VA+LF  +Y      YPS E
Sbjct: 712  GKLFDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLIEDVASLFHNRYSSDKIDYPSAE 771

Query: 1702 FGFVTNCFFHGLDPYEEIVHAIATREVIVRSSKGLAEPGTLFKNLMAILRDVVVCYDGTV 1523
            FG V  CFFHGLDPYEE+VH+I+TREV+VRSS+GL EPGTLFKNLMAILRDVV+CYDGTV
Sbjct: 772  FGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTV 831

Query: 1522 RNISSNSIIQFEYGV--GGMPSQILFAPGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWD 1349
            RN+ SNSIIQ EYG+  G M    LF PGEPVGVLAATAMS PAYKAVLDS+P+SNSSWD
Sbjct: 832  RNVCSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVLAATAMSTPAYKAVLDSTPSSNSSWD 891

Query: 1348 MMKEILFCRTNFRNDLNDRRVILYLKDCCCGRKYCQENASCLVKNHLKKVSLRDAAVELS 1169
            MMKEIL C+ +F+N+  DRRVILYL +C CGRKYC ENA+ +VK+HLKKV+L+DAA++  
Sbjct: 892  MMKEILLCKVSFKNEPIDRRVILYLNNCACGRKYCNENAAYVVKSHLKKVTLKDAAMDFM 951

Query: 1168 IEYKRPKFEPESCEIDTGLVGHIHLNAV--LLKESGIGVNDILLKCEEQVNLLRKKKKHG 995
            IEY R   +P    +  GLVGH+HLN V  LLKE  I + ++L +C+E ++  +KKKK  
Sbjct: 952  IEYNR---QPTPSGLGPGLVGHVHLNRVRMLLKELNIDMTEVLRRCQETMSSFKKKKKK- 1007

Query: 994  YFFKRILLSVSE-CCFFKHSGSRWTDMPCLKFFWQEQDLSDSHLERTKHIMADMICPALL 818
                 +  S+SE C F + +G    DMPCL F+ Q +D+   HLERT HI+AD++ P L 
Sbjct: 1008 -IAHALRFSISEHCAFHQWNGEESIDMPCLIFWHQTRDV---HLERTAHILADIVFPLLS 1063

Query: 817  DTIIKGDPRISTVNIIWINPGTTTWVQSPCSDGKGELAVEVTLEKEAVRHNGDAWRIVLD 638
            +TIIKGDPRI + ++IWI+P +T+W ++P     GELA++V LEK AV+ NGDAWR VLD
Sbjct: 1064 ETIIKGDPRIKSASVIWISPDSTSWQKNPSRWQDGELALDVCLEKSAVKQNGDAWRNVLD 1123

Query: 637  CCLPVFHLIDSTRSIPYAIKQIEDLFGVSSAFDQAIQRLSTSVAKVTKDVLKEHLLLLAS 458
            CCLPV HLID+ RS+PYAIKQ+++L G+S AFDQ IQRLS SV+ V+K VL +HL+LLA+
Sbjct: 1124 CCLPVLHLIDTRRSVPYAIKQVQELLGISCAFDQMIQRLSKSVSMVSKGVLGDHLILLAN 1183

Query: 457  SMTCSGNLVGFNMGGIKALCRALNVKVPFTEATLY------------------------- 353
            SMTC+GN++GFN GG KAL RALN++VPFTEATL+                         
Sbjct: 1184 SMTCTGNMIGFNSGGYKALSRALNIQVPFTEATLFVSPFHSLVLSLYMKFNFFFLFFLNG 1243

Query: 352  ---TPRKCFERASEKRHMDTLASIVGSCSWGKRVALGTGAKFDVLWDTEEIG-MTDKPID 185
               TPRKCFE+A+EK H D+L+SIV SCSWGK VA+GTG++FD+LWD +E+G   D  +D
Sbjct: 1244 XYTTPRKCFEKAAEKCHKDSLSSIVASCSWGKHVAVGTGSRFDILWDQKELGCKQDDVVD 1303

Query: 184  VYNFLHLVSCSNEEEMDTGCLGEDIENFDSEDVYKEHDRSPE---QENKAVFED 32
            VYNFLH+V     EE  + CLGE+IE+   ED Y E   SPE      K VFED
Sbjct: 1304 VYNFLHMVRSGKSEEPTSACLGEEIEDIMVEDEYGELTLSPEPFSTSEKPVFED 1357


>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
            gi|550343552|gb|EEE78905.2| hypothetical protein
            POPTR_0003s19630g [Populus trichocarpa]
          Length = 1920

 Score =  781 bits (2018), Expect = 0.0
 Identities = 403/652 (61%), Positives = 496/652 (76%), Gaps = 7/652 (1%)
 Frame = -1

Query: 1966 NELVQLQFEAHIKQLKLPIASFILKSSALGNLIDSRSDSAINKIVEQIGFLGLQLSDKRK 1787
            NELV+LQ E HI+ +K P+  FIL SSALG LIDS+SD+A+ K+V+QIGFLGLQ+SD+ K
Sbjct: 659  NELVELQVENHIRDVKQPVREFILTSSALGYLIDSKSDAAVTKVVQQIGFLGLQVSDRGK 718

Query: 1786 FYSRGLVEEVATLFRQKYPF-VSKYPSEEFGFVTNCFFHGLDPYEEIVHAIATREVIVRS 1610
             YS+ LVE++A+ F  KYP  +  YPS ++G + N FFHGLD YEE+ H+I+TREVIVRS
Sbjct: 719  LYSKTLVEDLASHFLSKYPANLFDYPSAQYGLIQNSFFHGLDAYEEMAHSISTREVIVRS 778

Query: 1609 SKGLAEPGTLFKNLMAILRDVVVCYDGTVRNISSNSIIQFEYGVG-GMPSQILFAPGEPV 1433
            S+GL+EPGTLFKNLMAILRDVV+CYDGTVRN+SSNSIIQFEYGV  G  SQ LF  GEPV
Sbjct: 779  SRGLSEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFEYGVKVGTESQSLFPAGEPV 838

Query: 1432 GVLAATAMSNPAYKAVLDSSPNSNSSWDMMKEILFCRTNFRNDLNDRRVILYLKDCCCGR 1253
            GVLAATAMSNPAYKAVLDS+P+SN SWDMMKEIL C+  F+NDL DRRVILYL DC CGR
Sbjct: 839  GVLAATAMSNPAYKAVLDSTPSSNCSWDMMKEILLCKVGFKNDLADRRVILYLNDCGCGR 898

Query: 1252 KYCQENASCLVKNHLKKVSLRDAAVELSIEYKRPKFEPESCEIDTGLVGHIHLNAVLLKE 1073
             YCQE A+ LVKNHL+KVSL+D A    IEYK  +  PES   D GLVGH+HL+   L++
Sbjct: 899  NYCQERAAYLVKNHLEKVSLKDIAKCFMIEYKSQQI-PESFGSDAGLVGHVHLDKRKLQD 957

Query: 1072 SGIGVNDILLKCEEQVNLLRKKKKHGYFFKRILLSVSECCFFKHSGSRWTDMPCLKFFWQ 893
              I    IL KC+E VN  RKKKK G  FK+ +L VSE C F+       + PCL FFWQ
Sbjct: 958  LNITAQVILEKCQETVNTFRKKKKVGNLFKKTILLVSESCSFQQCID---ESPCLMFFWQ 1014

Query: 892  EQDLSDSHLERTKHIMADMICPALLDTIIKGDPRISTVNIIWINPGTTTWVQSPCSDGKG 713
              D  D HLERT +I+ADMICP LL+TIIKGD RIS  NIIW  P T TW+++P    KG
Sbjct: 1015 GAD--DVHLERTSNILADMICPVLLETIIKGDHRISCANIIWATPETNTWIRNPSRTQKG 1072

Query: 712  ELAVEVTLEKEAVRHNGDAWRIVLDCCLPVFHLIDSTRSIPYAIKQIEDLFGVSSAFDQA 533
            ELA+++ LEK  V+ +GDAWRIVLD CLPV HLI++TRSIPYAIKQ+++L GVS AFD A
Sbjct: 1073 ELALDIVLEKSVVKKSGDAWRIVLDSCLPVLHLINTTRSIPYAIKQVQELLGVSCAFDTA 1132

Query: 532  IQRLSTSVAKVTKDVLKEHLLLLASSMTCSGNLVGFNMGGIKALCRALNVKVPFTEATLY 353
            +QRLS SV  V K VLKEHL+LL +SMTC+G+L+GF  GG K L R+L+++VPFTEATL+
Sbjct: 1133 VQRLSKSVTMVAKGVLKEHLILLGNSMTCAGSLIGFYTGGYKTLSRSLDIQVPFTEATLF 1192

Query: 352  TPRKCFERASEKRHMDTLASIVGSCSWGKRVALGTGAKFDVLWDTEEIGMT-DKPIDVYN 176
            TPRKCFE+A+EK H D+L+SIV SC+WGK V +GTG+ FDVLWDT+E  +  +  +DVY+
Sbjct: 1193 TPRKCFEKAAEKCHTDSLSSIVASCAWGKHVTVGTGSHFDVLWDTKEACLNPEGSMDVYS 1252

Query: 175  FLHLV-SCSNEEEMDTGCLGEDIENFDSEDVYKEHDRSPE---QENKAVFED 32
            FL++V S +  EE  T CLG ++++   ED  ++ + SPE     +K  FED
Sbjct: 1253 FLNMVRSTAGGEESVTACLGAEVDDLMLED--EDWNLSPEHNSSSDKPTFED 1302


>gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1127

 Score =  781 bits (2017), Expect = 0.0
 Identities = 393/658 (59%), Positives = 505/658 (76%), Gaps = 14/658 (2%)
 Frame = -1

Query: 1966 NELVQLQFEAHIKQLKLPIASFILKSSALGNLIDSRSDSAINKIVEQIGFLGLQLSDKRK 1787
            NE V++Q E H++  KLP+  F+LKSS +G LIDS+S+SA NK+V+QIGFLGLQ+SD+ K
Sbjct: 205  NESVEVQLEHHLRNEKLPVIDFVLKSSGMGVLIDSKSESAFNKVVQQIGFLGLQISDRGK 264

Query: 1786 FYSRGLVEEVATLFRQKYPFVSKYPSEEFGFVTNCFFHGLDPYEEIVHAIATREVIVRSS 1607
            FY   LV ++A LF++KYP V   PSEEFG V +C F+GLDPY+ ++H+I++REVIVRS+
Sbjct: 265  FYXXTLVHDMAQLFQKKYPSVGTNPSEEFGLVRSCLFYGLDPYQGMIHSISSREVIVRST 324

Query: 1606 KGLAEPGTLFKNLMAILRDVVVCYDGTVRNISSNSIIQFEYGVGG---MPSQILFAPGEP 1436
            +GL EPGTLF NLMAILRDVV+CYDGTVRN+SSNSIIQFEYG  G   +PS+  F  G+P
Sbjct: 325  RGLTEPGTLFXNLMAILRDVVICYDGTVRNVSSNSIIQFEYGSSGGSNLPSE--FCAGDP 382

Query: 1435 VGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKEILFCRTNFRNDLNDRRVILYLKDCCCG 1256
            VGVLAATAMSNPAYKA LDSSP+SNSSW+MMKEIL C  +F+ND++DRRVILYL DC C 
Sbjct: 383  VGVLAATAMSNPAYKAXLDSSPSSNSSWEMMKEILLCGVSFKNDVSDRRVILYLNDCGCR 442

Query: 1255 RKYCQENASCLVKNHLKKVSLRDAAVELSIEYKRPKFEPESCEIDTGLVGHIHLNAVLLK 1076
            R YC+E A+ +VKNHL KV L+DAA E  IEY   +   E+ E  TGL+GHI LN   L+
Sbjct: 443  RGYCREKAAYVVKNHLSKVCLKDAADEFLIEYAGRQAGYENSETGTGLIGHIRLNQGQLE 502

Query: 1075 ESGIGVNDILLKCEEQVNLLRKKKKHGYFFKRILLSVSECCFFKH-SGSRWTDMPCLKFF 899
              GI V ++  +C+E ++  R KKK G  FKRI+LSVSE C F H SGS+  + PCL+F 
Sbjct: 503  NLGISVLEVHERCQENISSFRXKKKIGNLFKRIVLSVSEFCSFCHNSGSKCLNAPCLRFS 562

Query: 898  WQEQDLSDSHLERTKHIMADMICPALLDTIIKGDPRISTVNIIWINPGTTTWVQSPCSDG 719
            W   D SD HLER  HI+ADMI P LLDT+IKGDPR+S+ NI WI+P T +W++SP    
Sbjct: 563  WP--DASDDHLERVSHILADMIXPILLDTVIKGDPRVSSANIAWISPDTMSWIRSPSKSQ 620

Query: 718  KGELAVEVTLEKEAVRHNGDAWRIVLDCCLPVFHLIDSTRSIPYAIKQIEDLFGVSSAFD 539
            +GELA+++ LEKEAV+  GDAWR ++D CLPV HLID+TRSIPYAIKQ+++L G+S AF+
Sbjct: 621  RGELALDIVLEKEAVKXRGDAWRXLMDSCLPVIHLIDTTRSIPYAIKQVQELIGISCAFE 680

Query: 538  QAIQRLSTSVAKVTKDVLKEHLLLLASSMTCSGNLVGFNMGGIKALCRALNVKVPFTEAT 359
            QA+ RLSTSV  VTK VLK+HL+LLA+SMTC+GNLVGFN GGIKAL R+LNV++PFTEAT
Sbjct: 681  QAVXRLSTSVTMVTKGVLKDHLVLLANSMTCAGNLVGFNAGGIKALSRSLNVQIPFTEAT 740

Query: 358  LYTPRKCFERASEKRHMDTLASIVGSCSWGKRVALGTGAKFDVLWDTEEIGMT-DKPIDV 182
            L+TPRKCFERA+EK H+D+L+SIV SCSWGK VA+GTG++F+VL +T  +        DV
Sbjct: 741  LFTPRKCFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFEVLLNTRNVEWNIPDTRDV 800

Query: 181  YNFLHLVSCSNEEEMD-TGCLGEDIENFDSED---VYKEHDRS-----PEQENKAVFE 35
            Y+FLHLV  ++ +E++ T CLG +I+  + ++   +Y   +R      P  E++A F+
Sbjct: 801  YSFLHLVRNTSAQEVEGTSCLGAEIDELEEDEDMGLYLSPNRDSGSEMPTFEDRAEFD 858


>ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer
            arietinum]
          Length = 2263

 Score =  778 bits (2009), Expect = 0.0
 Identities = 388/653 (59%), Positives = 504/653 (77%), Gaps = 6/653 (0%)
 Frame = -1

Query: 1963 ELVQLQFEAHIKQLKLPIASFILKSSALGNLIDSRSDSAINKIVEQIGFLGLQLSDKRKF 1784
            ELV  Q E H++ ++LP+ +F LKS+ LG+LIDS+S SA++K+V+QIGFLG QL ++ KF
Sbjct: 658  ELVAQQLEKHMQDIELPVINFALKSTKLGDLIDSKSKSALDKVVQQIGFLGQQLFERGKF 717

Query: 1783 YSRGLVEEVATLFRQKYPFVSK-YPSEEFGFVTNCFFHGLDPYEEIVHAIATREVIVRSS 1607
            YS+GLVE+V + F  K  +    YPS EFG +  CFFHGLDPYEE+VH+IATRE+IVRSS
Sbjct: 718  YSKGLVEDVGSHFHVKCFYDGDGYPSAEFGLLKGCFFHGLDPYEELVHSIATREIIVRSS 777

Query: 1606 KGLAEPGTLFKNLMAILRDVVVCYDGTVRNISSNSIIQFEYGV-GGMPSQILFAPGEPVG 1430
            +GL+EPGTLFKNLMAILRDVV+CYDGTVRN+ SNSIIQFEYG+  G  SQ LF  GEPVG
Sbjct: 778  RGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGIQSGDKSQPLFPAGEPVG 837

Query: 1429 VLAATAMSNPAYKAVLDSSPNSNSSWDMMKEILFCRTNFRNDLNDRRVILYLKDCCCGRK 1250
            VLAAT+MSNPAYKAVLD+SP+SNSSW+ MKEIL C+ NFRN+ NDRRVILYL DC CGR 
Sbjct: 838  VLAATSMSNPAYKAVLDASPSSNSSWEFMKEILLCKVNFRNEPNDRRVILYLNDCDCGRS 897

Query: 1249 YCQENASCLVKNHLKKVSLRDAAVELSIEYKRPKFEPESCEIDTGLVGHIHLNAVLLKES 1070
            YC+ENA+ LVKN L+KVSL+DAA++ ++EY++ +   +  E D GLVGHIHLN  +L++ 
Sbjct: 898  YCRENAAYLVKNQLRKVSLKDAALDFTVEYQQQRRRNDGSE-DAGLVGHIHLNEAMLEKL 956

Query: 1069 GIGVNDILLKCEEQVNLLRKKKKHGYFFKRILLSVSECCFFKHSGSRWTDMPCLKFFWQE 890
             I ++++  KC+E++N   +KKK  +FF++  L  SE C   +S +     PC+   W +
Sbjct: 957  KINMSEVYQKCQERLNSFSRKKKVFHFFRKTELFFSESCSSLNSSA-----PCVTILWPD 1011

Query: 889  QDLSDSHLERTKHIMADMICPALLDTIIKGDPRISTVNIIWINPGTTTWVQSPCSDGKGE 710
             D     L++T  ++ADMICP LLDTII+GDPRIS+ NIIW+NPGT TWV++P     GE
Sbjct: 1012 GD----DLDQTTKVLADMICPVLLDTIIQGDPRISSANIIWVNPGTNTWVRNPSKSSNGE 1067

Query: 709  LAVEVTLEKEAVRHNGDAWRIVLDCCLPVFHLIDSTRSIPYAIKQIEDLFGVSSAFDQAI 530
            LA++V LEKEAV+ +GDAWRI+LD CLPV HLID+ RS PYAIKQI++L G+S  FDQAI
Sbjct: 1068 LALDVILEKEAVKQSGDAWRIILDSCLPVLHLIDTRRSTPYAIKQIQELLGISCTFDQAI 1127

Query: 529  QRLSTSVAKVTKDVLKEHLLLLASSMTCSGNLVGFNMGGIKALCRALNVKVPFTEATLYT 350
            QRL+ SV  V K VL+EHL+LLASSMTC GNLVGFN GG K L R LN++VPFT+ATL+T
Sbjct: 1128 QRLAASVRMVAKGVLREHLILLASSMTCGGNLVGFNTGGYKTLARQLNIQVPFTDATLFT 1187

Query: 349  PRKCFERASEKRHMDTLASIVGSCSWGKRVALGTGAKFDVLWDTEEIGMTD-KPIDVYNF 173
            PRKCFERA+EKRH D+L+SIV SCSWGK VA+GTG++FD++WD +E+   + + +DVYNF
Sbjct: 1188 PRKCFERAAEKRHADSLSSIVASCSWGKHVAVGTGSRFDIVWDPKEVKSNEIEGMDVYNF 1247

Query: 172  LHLV-SCSNEEEMDTGCLGEDIENFDSEDVYKEHDRSPEQEN--KAVFEDVYK 23
            L++V   +N +E +  CLGEDI++   +D   +   SPE  +   AVF++ ++
Sbjct: 1248 LNMVKGLANGDEENNACLGEDIDDLLDDD-NMDWGMSPEHTSGFDAVFDESFE 1299


>ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
          Length = 2082

 Score =  760 bits (1963), Expect = 0.0
 Identities = 387/651 (59%), Positives = 497/651 (76%), Gaps = 6/651 (0%)
 Frame = -1

Query: 1966 NELVQLQFEAHIKQLKLPIASFILKSSALGNLIDSRSDSAINKIVEQIGFLGLQLSDKRK 1787
            NELV  Q E HI+ ++LPI +F LKS+ LG+LIDS+S SAI+K+V+QIGFLG QL D+ +
Sbjct: 657  NELVAQQLEKHIRDVELPIINFALKSTKLGDLIDSKSKSAIDKVVQQIGFLGQQLFDRGR 716

Query: 1786 FYSRGLVEEVATLFRQKYPFVSK-YPSEEFGFVTNCFFHGLDPYEEIVHAIATREVIVRS 1610
            FYS+GLV++VA+ F  K  +    YPS E+G +  CFF+GLDPYEE+VH+I+TRE++VRS
Sbjct: 717  FYSKGLVDDVASHFHAKCCYDGDGYPSAEYGLLKGCFFNGLDPYEEMVHSISTREIMVRS 776

Query: 1609 SKGLAEPGTLFKNLMAILRDVVVCYDGTVRNISSNSIIQFEYGV-GGMPSQILFAPGEPV 1433
            S+GL+EPGTLFKNLMAILRDVV+CYDGTVRNI SNSIIQFEYG+  G  S+ LF  GEPV
Sbjct: 777  SRGLSEPGTLFKNLMAILRDVVICYDGTVRNICSNSIIQFEYGIQAGDKSEHLFPAGEPV 836

Query: 1432 GVLAATAMSNPAYKAVLDSSPNSNSSWDMMKEILFCRTNFRNDLNDRRVILYLKDCCCGR 1253
            GVLAATAMSNPAYKAVLD+SP+SNSSW++MKEIL C+ NFRN+L DRRVILYL DC CG 
Sbjct: 837  GVLAATAMSNPAYKAVLDASPSSNSSWELMKEILLCKVNFRNELVDRRVILYLNDCDCGG 896

Query: 1252 KYCQENASCLVKNHLKKVSLRDAAVELSIEYKRPKFEPESCEIDTGLVGHIHLNAVLLKE 1073
             YC+ENA+  VK+ L+KVSL+DAAVE  IEY++ + + E+ E D GLVGHI+L+ ++L+E
Sbjct: 897  SYCRENAAYSVKDQLRKVSLKDAAVEFIIEYQQQRTQKENSETDVGLVGHIYLDEMMLEE 956

Query: 1072 SGIGVNDILLKCEEQVNLLRKKKKHGYFFKRILLSVSECCFFKHSGSRWTDMPCLKFFWQ 893
              I +  +  KC E++    +KKK     K I LS SE C   H  +     PCL F+ +
Sbjct: 957  LKISMAYVFDKCHERLKSFSQKKKVNQSLKNIELSFSESCSSSHPAA-----PCLTFWLK 1011

Query: 892  EQDLSDSHLERTKHIMADMICPALLDTIIKGDPRISTVNIIWINPGTTTWVQSPCSDGKG 713
              D   S L+    ++A+ ICP L  TII+GDPRIS+ +IIW++P T TWV++P     G
Sbjct: 1012 NYD---SDLDNAVKVLAEKICPVLFKTIIQGDPRISSASIIWVSPDTNTWVRNPYKSSNG 1068

Query: 712  ELAVEVTLEKEAVRHNGDAWRIVLDCCLPVFHLIDSTRSIPYAIKQIEDLFGVSSAFDQA 533
            ELA+++ LEKEAV+ +GDAWR+VLD CLPV HLID+ RSIPYAIKQI++L G+S  FDQA
Sbjct: 1069 ELALDIILEKEAVKQSGDAWRVVLDACLPVLHLIDTRRSIPYAIKQIQELLGISCTFDQA 1128

Query: 532  IQRLSTSVAKVTKDVLKEHLLLLASSMTCSGNLVGFNMGGIKALCRALNVKVPFTEATLY 353
            IQR++ SV  V K VL+EHL+LLASSMTC GNLVGFN+GG KAL R LN++VPFT+ATL+
Sbjct: 1129 IQRVAASVKMVAKGVLREHLILLASSMTCGGNLVGFNIGGYKALSRQLNIQVPFTDATLF 1188

Query: 352  TPRKCFERASEKRHMDTLASIVGSCSWGKRVALGTGAKFDVLWDTEEIGMTD-KPIDVYN 176
            TP+KCFERA+EK H D+L+SIV SCSWGK VA+GTG+KFDV+WD  EI   + + +DVY+
Sbjct: 1189 TPKKCFERAAEKCHTDSLSSIVASCSWGKHVAVGTGSKFDVVWDANEIKSNEIEGMDVYS 1248

Query: 175  FLHLV-SCSNEEEMDTGCLGEDIENFDSEDVYKEHDRSPEQEN--KAVFED 32
            FLH+V S +N EE    CLGEDI++   E+ Y +   SP+  +  +AVFE+
Sbjct: 1249 FLHMVKSFTNGEEETDACLGEDIDDL-LEEEYMDLGMSPQHNSGFEAVFEE 1298


>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
          Length = 2020

 Score =  756 bits (1951), Expect = 0.0
 Identities = 382/651 (58%), Positives = 497/651 (76%), Gaps = 6/651 (0%)
 Frame = -1

Query: 1966 NELVQLQFEAHIKQLKLPIASFILKSSALGNLIDSRSDSAINKIVEQIGFLGLQLSDKRK 1787
            NELV  Q E HI+ ++LPI +F LKS+ LG+LIDS+S S I+K+V+Q+GFLG QL D+ +
Sbjct: 657  NELVAQQLEKHIQDVELPIINFALKSTKLGDLIDSKSKSTIDKVVQQVGFLGQQLFDRGR 716

Query: 1786 FYSRGLVEEVATLFRQKYPFVSK-YPSEEFGFVTNCFFHGLDPYEEIVHAIATREVIVRS 1610
            FYS+GLV++VA+ F  K  +    YPS E+G +  CFF+GLDPYEE+VH+I+TRE++VRS
Sbjct: 717  FYSKGLVDDVASHFHAKCCYDGDGYPSAEYGLLKGCFFNGLDPYEEMVHSISTREIMVRS 776

Query: 1609 SKGLAEPGTLFKNLMAILRDVVVCYDGTVRNISSNSIIQFEYGV-GGMPSQILFAPGEPV 1433
            S+GL+EPGTLFKNLMAILRDVV+CYDGTVRNI SNSIIQFEYG+  G  ++ LF  GEPV
Sbjct: 777  SRGLSEPGTLFKNLMAILRDVVICYDGTVRNICSNSIIQFEYGIQAGDKTEHLFPAGEPV 836

Query: 1432 GVLAATAMSNPAYKAVLDSSPNSNSSWDMMKEILFCRTNFRNDLNDRRVILYLKDCCCGR 1253
            GVLAATAMSNPAYKAVLD+SPNSNSSW++MKEIL C+ NFRN+  DRRVILYL DC CG 
Sbjct: 837  GVLAATAMSNPAYKAVLDASPNSNSSWELMKEILLCKVNFRNEPVDRRVILYLNDCDCGG 896

Query: 1252 KYCQENASCLVKNHLKKVSLRDAAVELSIEYKRPKFEPESCEIDTGLVGHIHLNAVLLKE 1073
              C+ENA+  VKN L+KVSL++AAVE  IEY++ + + E+ E D GLVGHI+L+ ++L+E
Sbjct: 897  SCCRENAAYSVKNQLRKVSLKNAAVEFIIEYQQQRTQKENSETDAGLVGHIYLDEMMLEE 956

Query: 1072 SGIGVNDILLKCEEQVNLLRKKKKHGYFFKRILLSVSECCFFKHSGSRWTDMPCLKFFWQ 893
              I + ++  KC E++    +KKK   + K I LS SE C   H  +     PCL F+ +
Sbjct: 957  LKISMANVFEKCLERLKSFSRKKKVNQYLKNIELSFSESCSSSHPAA-----PCLTFWLK 1011

Query: 892  EQDLSDSHLERTKHIMADMICPALLDTIIKGDPRISTVNIIWINPGTTTWVQSPCSDGKG 713
              D   S L+    ++++ ICP L +TIIKGDPRIS+ +IIW++P T TWV++P     G
Sbjct: 1012 NHD---SDLDNAVKVLSENICPVLFETIIKGDPRISSASIIWVSPDTNTWVRNPYKSSNG 1068

Query: 712  ELAVEVTLEKEAVRHNGDAWRIVLDCCLPVFHLIDSTRSIPYAIKQIEDLFGVSSAFDQA 533
            ELA+++ LE+EAV+ +GDAWRIVLD CLPV HLID+ RSIPYAIKQI++L G+S  FDQA
Sbjct: 1069 ELALDIVLEEEAVKQSGDAWRIVLDSCLPVLHLIDTRRSIPYAIKQIQELLGISCTFDQA 1128

Query: 532  IQRLSTSVAKVTKDVLKEHLLLLASSMTCSGNLVGFNMGGIKALCRALNVKVPFTEATLY 353
            IQR++ SV  V K VL+EHL+LLASSMTC GNLVGFN GG KAL R LN++VPFT+ATL+
Sbjct: 1129 IQRVAASVKMVAKGVLREHLILLASSMTCGGNLVGFNTGGYKALSRQLNIQVPFTDATLF 1188

Query: 352  TPRKCFERASEKRHMDTLASIVGSCSWGKRVALGTGAKFDVLWDTEEIGMTD-KPIDVYN 176
            TP+KCFERA+EK H D+L+SIV SCSWGK VA+GTG+KFD++WD+ EI   + + +DVY+
Sbjct: 1189 TPKKCFERAAEKCHTDSLSSIVASCSWGKHVAVGTGSKFDIVWDSSEIKSNEIEGMDVYS 1248

Query: 175  FLHLV-SCSNEEEMDTGCLGEDIENFDSEDVYKEHDRSPEQEN--KAVFED 32
            FLH+V S +N EE    CLGEDI++   E+ Y +   SP+  +  +AVFE+
Sbjct: 1249 FLHMVKSVTNGEEETDACLGEDIDDL-LEEEYMDLGMSPQHNSGFEAVFEE 1298


>gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlisea aurea]
          Length = 1379

 Score =  747 bits (1929), Expect = 0.0
 Identities = 369/683 (54%), Positives = 497/683 (72%), Gaps = 5/683 (0%)
 Frame = -1

Query: 2056 DFFYPISDLKDMQIDIQDXXXXXXXXXXXFNELVQLQFEAHIKQLKLPIASFILKSSALG 1877
            DFF P   L+ ++ +IQ            ++E + LQ E+++  +K P+  FI+ SSA+G
Sbjct: 622  DFFLPREVLEGIRENIQKISPLLSHLRDHYSESIALQLESYLSSVKTPVTEFIVNSSAIG 681

Query: 1876 NLIDSRSDSAINKIVEQIGFLGLQLSDKRKFYSRGLVEEVATLFRQKYPFVSKYPSEEFG 1697
             L DSRS+S ++K+V+QIGF G QLS K KFY+  LV+++++LFR KYP     P+E+FG
Sbjct: 682  FLTDSRSESGLSKVVQQIGFCGTQLSSKGKFYTERLVKDLSSLFRSKYPSSDDCPTEDFG 741

Query: 1696 FVTNCFFHGLDPYEEIVHAIATREVIVRSSKGLAEPGTLFKNLMAILRDVVVCYDGTVRN 1517
             V    F GL+PY+E+VH+I++REVIVRSS+GL EPGTLFKNLMAILRDVV+CYDGTVRN
Sbjct: 742  LVCQPLFRGLNPYQEMVHSISSREVIVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRN 801

Query: 1516 ISSNSIIQFEYGVGGMPSQILFAPGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKE 1337
            + SNSIIQFEY          F  G+PVGVLAAT+MSNPAYKAVLDSS +SNS+W MMK+
Sbjct: 802  MCSNSIIQFEYSANSTDIVTEFCAGDPVGVLAATSMSNPAYKAVLDSSSSSNSAWQMMKD 861

Query: 1336 ILFCRTNFRNDLNDRRVILYLKDCCCGRKYCQENASCLVKNHLKKVSLRDAAVELSIEYK 1157
            IL C T+F+ND++DRRVILYL DC CGRK+CQE  + +V+NHLKKV+L+D AV+  IEY 
Sbjct: 862  ILLCATSFKNDISDRRVILYLTDCECGRKHCQETGALVVQNHLKKVTLKDTAVDFLIEYF 921

Query: 1156 RPKFEPESCEIDTGLVGHIHLNAVLLKESGIGVNDILLKCEEQVNLLRKKKKHGYFFKRI 977
                +    E   GLVGHIHL+ + L  S +  + I   C E +NL  KKKK G  FK+I
Sbjct: 922  HQLCQSLE-EGYPGLVGHIHLSEMELIRSNVNKDRIFEGCLETINLYEKKKKVGNLFKKI 980

Query: 976  LLSVSE-CCFFKHSGSRWTDMPCLKFFWQEQDLSDSHLERTKHIMADMICPALLDTIIKG 800
             LS S+ C F   S S+ T++PC++F W     +   +++  H+++D +CPALL T+IKG
Sbjct: 981  KLSYSDHCTFCASSKSKRTEVPCVQFLWNG---AIDDIDKVSHLLSDTVCPALLQTVIKG 1037

Query: 799  DPRISTVNIIWINPGTTTWVQSPCSDGKGELAVEVTLEKEAVRHNGDAWRIVLDCCLPVF 620
            DPR+ST  I+W++PGT TW++SP  +  GE+A+EV  EKEA RH+GDAWR+ +D C+PV 
Sbjct: 1038 DPRVSTAEIVWVSPGTATWIRSPSKNLNGEMAIEVVFEKEAARHSGDAWRVAMDSCVPVM 1097

Query: 619  HLIDSTRSIPYAIKQIEDLFGVSSAFDQAIQRLSTSVAKVTKDVLKEHLLLLASSMTCSG 440
            HLID+ RSIPYAIKQ+++L G+S AF+QA+QRLSTSV  VTK VLK+H+LLL ++MTC+G
Sbjct: 1098 HLIDTKRSIPYAIKQVQELLGISCAFEQAVQRLSTSVTMVTKGVLKDHILLLGNNMTCAG 1157

Query: 439  NLVGFNMGGIKALCRALNVKVPFTEATLYTPRKCFERASEKRHMDTLASIVGSCSWGKRV 260
             L+GFN GGIKAL ++L++ VPF  ATL+TPRKCFERA+EK H+D L S+VGSC+WGK V
Sbjct: 1158 TLIGFNSGGIKALSQSLDLHVPFMTATLFTPRKCFERAAEKCHVDKLTSVVGSCAWGKHV 1217

Query: 259  ALGTGAKFDVLWDTEEIGMT-DKPIDVYNFLHLVSCSNEEEMDTGCLGEDIENFDSEDVY 83
            ++GTG+ F++LWDT +  +  DK +DVY FLHLV+ S   +M T C+G +IE+ D E   
Sbjct: 1218 SVGTGSPFEILWDTRKTDLNPDKELDVYGFLHLVNGSVPLDMGTSCIGTEIEDLDQE--L 1275

Query: 82   KEHDRSPEQE---NKAVFEDVYK 23
             + + SPE+E    K  F+D ++
Sbjct: 1276 MDFELSPEREPGLEKPTFDDEHE 1298


>ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
            gi|355521860|gb|AET02314.1| DNA-directed RNA polymerase
            subunit [Medicago truncatula]
          Length = 2032

 Score =  741 bits (1914), Expect = 0.0
 Identities = 387/681 (56%), Positives = 496/681 (72%), Gaps = 34/681 (4%)
 Frame = -1

Query: 1963 ELVQLQFEAHIKQLKLPIASFILKSSALGNLIDSRSDSAINKIVEQIGFLGLQLSDKRKF 1784
            ELV  Q E  I+ ++LP+ +F LKS+ LG+LIDS+S SA++K+++QIGFLG QL ++ KF
Sbjct: 740  ELVAQQLEKVIQDIELPVINFALKSTKLGDLIDSKSKSAVDKVIQQIGFLGQQLFERGKF 799

Query: 1783 YSRGLVEEVATLFRQKYPFVSK--YPSEEFGFVTNCFFHGLDPYEEIVHAIATREVIVRS 1610
            YS+GLVE+VA+ F+ K  F  K  YPS EFG +  CFFHGLDPYEE+VH+IATRE+I RS
Sbjct: 800  YSKGLVEDVASHFQLKC-FYDKDDYPSAEFGLLKGCFFHGLDPYEELVHSIATREIIDRS 858

Query: 1609 SKGLAEPGTLFKNLMAILRDVVVCYDGTVRNISSNSIIQFEYGV-GGMPSQILFAPGEPV 1433
            S+GL+EPGTLFKNLMAILRDVV+CYDGTVRN+ SNSIIQFEYG+  G  +Q LF  GEPV
Sbjct: 859  SRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGIQSGDAAQHLFPAGEPV 918

Query: 1432 GVLAATAMSNPAYKAVLDSSPNSNSSWDMMKEILFCRTNFRNDLNDRRVILYLKDCCCGR 1253
            GVLAAT+MSNPAYKAVLD+SP+SNSSW  MKEIL C+ NFRN+ NDRRVILYL DC CGR
Sbjct: 919  GVLAATSMSNPAYKAVLDASPSSNSSWGFMKEILLCKVNFRNEPNDRRVILYLNDCDCGR 978

Query: 1252 KYCQENASCLVKNHLKKVSLRDAAVELSIEYKRPKFEPESCEIDTGLVGHIHLNAVLLKE 1073
             YC+ENA+ LV+N L+KVSL+DAA++  +EY++ +   +  E D GLV HI L  V L+E
Sbjct: 979  NYCRENAAYLVQNQLRKVSLKDAALDFIVEYQQQRRRRDGTE-DAGLVCHIRLKEVKLEE 1037

Query: 1072 SGIGVNDILLKCEEQVNLLRKKKKHGYFFKRILLSVSECCFFKHSGSRWTDMPCLKFFWQ 893
              I + ++  KC+E++N   +KKK   FFKR  L  SE C            PC+ F W 
Sbjct: 1038 LKINMTEVYQKCQEKLNSFSRKKKLSPFFKRTELIFSEFC----------SAPCVTFLWP 1087

Query: 892  EQDLSDSHLERTKHIMADMICPALLDTIIKGDPRISTVNIIWINPGTTTWVQSPCSDGKG 713
            +       L++T  ++ADMICP LL+TII+GDPRIS+ +IIW+NPGT TWV++P     G
Sbjct: 1088 D----GVDLDQTTKVLADMICPVLLETIIQGDPRISSASIIWVNPGTNTWVRNPSKSSNG 1143

Query: 712  ELAVEVTLEKEAVRHNGDAWRIVLDCCLPVFHLIDSTRSIPYAIKQIEDLFGVSSAFDQA 533
            ELA++V LEKEAV+ +GDAWRIVLD CLPV HLID+ RSIPYAIKQI++L G++  FDQA
Sbjct: 1144 ELALDVILEKEAVKQSGDAWRIVLDSCLPVLHLIDTRRSIPYAIKQIQELLGIACTFDQA 1203

Query: 532  IQRLSTSVAKVTKDVLKEHLLLLASSMTCSGNLVGFNMGGIKALCRALNVKVPFTEATLY 353
            IQRL+ SV  V K VL+EHL+LLASSMTC GNLVGFN GG K L R L+++VPFT+ATL+
Sbjct: 1204 IQRLAASVRMVAKGVLREHLILLASSMTCGGNLVGFNTGGYKTLARQLDIQVPFTDATLF 1263

Query: 352  --------------------------TPRKCFERASEKRHMDTLASIVGSCSWGKRVALG 251
                                      TPRKCFERA+EK H D+L+SIV SCSWGK VA+G
Sbjct: 1264 VSALVISKLQDVFCYYFSYFVNVIMQTPRKCFERAAEKHHSDSLSSIVASCSWGKHVAVG 1323

Query: 250  TGAKFDVLWDTEEIGMTD-KPIDVYNFLHLV-SCSNEEEMDTGCLGEDIEN-FDSEDVYK 80
            TG+KFD++WD +EI   + + ++VY FL++V   +N EE    CLGEDI++ FD E+   
Sbjct: 1324 TGSKFDIVWDPKEIKTNEIEGMNVYKFLNMVKGLANGEEETNACLGEDIDDLFDDEN--G 1381

Query: 79   EHDRSPEQEN--KAVFEDVYK 23
            + D SP+  +   AVF++ ++
Sbjct: 1382 DFDMSPQHASGFDAVFDETFE 1402