BLASTX nr result

ID: Achyranthes23_contig00013935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00013935
         (419 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001615673.1| hypothetical protein sce5030 [Sorangium cell...    60   3e-07
ref|YP_008151946.1| hypothetical protein SCE1572_27770 [Sorangiu...    58   1e-06
ref|YP_003761931.1| hypothetical protein Nwat_2859 [Nitrosococcu...    56   6e-06

>ref|YP_001615673.1| hypothetical protein sce5030 [Sorangium cellulosum So ce56]
           gi|501194644|ref|WP_012237662.1| hypothetical protein
           [Sorangium cellulosum] gi|161163888|emb|CAN95193.1|
           hypothetical protein sce5030 [Sorangium cellulosum So
           ce56]
          Length = 209

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 34/87 (39%), Positives = 41/87 (47%), Gaps = 16/87 (18%)
 Frame = +1

Query: 37  FCGGFAGFECCNGLECVLDGDYSDAGGECKP--NGRSC-------QFNDELCGGVADLPC 189
           FCGGFAGFEC  GLEC+      D   +C P   G  C       +   + CGG+   PC
Sbjct: 126 FCGGFAGFECPEGLECI-----DDPSDDCDPKHGGADCGGICVVPEPRPQACGGITARPC 180

Query: 190 CKGLQCVQDPN-------FPDNGGKCV 249
            +GL C+ DP          D GG CV
Sbjct: 181 PEGLTCIDDPGDDCSPPIGADCGGICV 207


>ref|YP_008151946.1| hypothetical protein SCE1572_27770 [Sorangium cellulosum So0157-2]
           gi|522824767|ref|WP_020737466.1| hypothetical protein
           [Sorangium cellulosum] gi|521004930|gb|AGP37933.1|
           hypothetical protein SCE1572_27770 [Sorangium cellulosum
           So0157-2]
          Length = 195

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 32/74 (43%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
 Frame = +1

Query: 40  CGGFAGFECCNGLECVLDG----DYSDAGGECKPNGRSCQFNDELCGGVADLPCCKGLQC 207
           CGGFAGF C +GLECV D     D    G +C   G   +    +CGG+A   C  GL+C
Sbjct: 71  CGGFAGFPCPDGLECVDDPTDDCDPEHGGADCA--GVCVEPKPIMCGGIAGFSCPDGLEC 128

Query: 208 VQDPN---FPDNGG 240
           V DP     P++GG
Sbjct: 129 VDDPTDDCDPEHGG 142


>ref|YP_003761931.1| hypothetical protein Nwat_2859 [Nitrosococcus watsonii C-113]
           gi|502986699|ref|WP_013221675.1| hypothetical protein
           [Nitrosococcus watsonii] gi|299541293|gb|ADJ29610.1|
           conserved hypothetical protein [Nitrosococcus watsonii
           C-113]
          Length = 304

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/80 (41%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
 Frame = +1

Query: 40  CGGFAGFECCNGLECVLD--GDYSDAGGECKPNGRSCQFNDELCGGVADLPCCKGLQCVQ 213
           CGG AG  C  G +CV D   D   A G    +G       E+CGG+A LPC KG +CV 
Sbjct: 220 CGGIAGLPCPEGKKCVDDPSDDCDPARGGADCSGICVSRPKEMCGGIAGLPCPKGKRCVD 279

Query: 214 DPN--------FPDNGGKCV 249
           DP+          D GG CV
Sbjct: 280 DPSDDCDPTQGGADCGGICV 299


Top