BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00013650
         (1225 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX19931.1| viral replicase [Nandina mosaic virus]                 766   0.0  
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ...   758   0.0  
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ...   757   0.0  
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ...   756   0.0  
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ...   755   0.0  
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ...   754   0.0  
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ...   754   0.0  
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ...   754   0.0  
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1...   751   0.0  
gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago a...   749   0.0  
ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi...   662   0.0  
gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]             580   e-163
ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|5...   577   e-162
ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mo...   538   e-150
ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|A...   530   e-148
gb|AFM77886.1| replicase [Hosta virus X]                              519   e-144
ref|YP_002308464.1| replicase [Hosta virus X] gi|58415284|emb|CA...   519   e-144
ref|NP_077079.1| replicase [Clover yellow mosaic virus]               517   e-144
gb|AAF67818.1|AF111193_1 replicase [Potato virus X]                   515   e-143
gb|ABP87980.1| RNA dependent RNA polymerase [Potato virus X]          515   e-143

>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
          Length = 1368

 Score =  766 bits (1977), Expect = 0.0
 Identities = 373/408 (91%), Positives = 385/408 (94%)
 Frame = -1

Query: 1225 SLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGHT 1046
            SLVREDKIEEFSA               PVE+ TT LDDF+E L DKF+REIFTEAHGHT
Sbjct: 898  SLVREDKIEEFSAPPDPPKSVMPPVTHFPVEECTTALDDFREELHDKFDREIFTEAHGHT 957

Query: 1045 NCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHK 866
            NCVQ DDPTTQLFSHQQAKDEALLWETIKARLTISTPEAN+EEFRAKKDLGDILW NYHK
Sbjct: 958  NCVQTDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDLGDILWTNYHK 1017

Query: 865  AMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQWV 686
            AM LPKEQP+FSE+LWTRCAEEVQNTYLKKS++Q+KGGERRQSPDFHEHQILIFLKSQWV
Sbjct: 1018 AMNLPKEQPDFSEELWTRCAEEVQNTYLKKSLNQLKGGERRQSPDFHEHQILIFLKSQWV 1077

Query: 685  KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSR 506
            KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSR
Sbjct: 1078 KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSR 1137

Query: 505  WVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFL 326
            WVL+YWDFSKP+YANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFL
Sbjct: 1138 WVLSYWDFSKPAYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFL 1197

Query: 325  GTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALL 146
            GTLSIMRLTGEGPTFDANTECNIAYTHTRF IPEGTAQIYAGDDCAIAQVCPEKPSFALL
Sbjct: 1198 GTLSIMRLTGEGPTFDANTECNIAYTHTRFNIPEGTAQIYAGDDCAIAQVCPEKPSFALL 1257

Query: 145  KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 2
            K+RIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK
Sbjct: 1258 KDRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1305


>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  758 bits (1957), Expect = 0.0
 Identities = 370/408 (90%), Positives = 379/408 (92%)
 Frame = -1

Query: 1225 SLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGHT 1046
            SLVREDKIEEF+A               PVED TTTLDDFKE L DKF+REIF  AHGHT
Sbjct: 910  SLVREDKIEEFTAIPAEAKHVAPPCTHFPVEDGTTTLDDFKEELRDKFDREIFNPAHGHT 969

Query: 1045 NCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHK 866
            NCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEANL EFRAKKDLGDILW NY K
Sbjct: 970  NCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDLGDILWENYRK 1029

Query: 865  AMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQWV 686
            AMKLP EQP+FSEDLW RCAEEVQNTYLKKS+SQIKGGERRQSPDFHEHQILIFLKSQWV
Sbjct: 1030 AMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQILIFLKSQWV 1089

Query: 685  KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSR 506
            KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLSR
Sbjct: 1090 KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLSR 1149

Query: 505  WVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFL 326
            WVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF+
Sbjct: 1150 WVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFM 1209

Query: 325  GTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALL 146
            GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVCPEKPSF+LL
Sbjct: 1210 GTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVCPEKPSFSLL 1269

Query: 145  KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 2
            KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK
Sbjct: 1270 KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1317


>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  757 bits (1955), Expect = 0.0
 Identities = 370/408 (90%), Positives = 379/408 (92%)
 Frame = -1

Query: 1225 SLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGHT 1046
            SLVREDKIEEF+A               PVED TTTLDDFKE L DKF+REIF   HGHT
Sbjct: 910  SLVREDKIEEFTATTAEAKPVAPPCTHFPVEDGTTTLDDFKEELHDKFDREIFNPTHGHT 969

Query: 1045 NCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHK 866
            NCVQ DDPTTQLFSHQQAKDEALLWETI ARLTIS PEANL EFRAKKDLGDILW NY K
Sbjct: 970  NCVQTDDPTTQLFSHQQAKDEALLWETINARLTISNPEANLAEFRAKKDLGDILWENYRK 1029

Query: 865  AMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQWV 686
            AMKLP EQP+FSEDLW RCAEEVQNTYLKKS++QIKGGERRQSPDFHEHQILIFLKSQWV
Sbjct: 1030 AMKLPNEQPDFSEDLWIRCAEEVQNTYLKKSVAQIKGGERRQSPDFHEHQILIFLKSQWV 1089

Query: 685  KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSR 506
            KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFR+ALSPNNIMINCEKTPQDLSR
Sbjct: 1090 KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFREALSPNNIMINCEKTPQDLSR 1149

Query: 505  WVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFL 326
            WVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFL
Sbjct: 1150 WVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFL 1209

Query: 325  GTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALL 146
            GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVCPEKPSF+LL
Sbjct: 1210 GTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVCPEKPSFSLL 1269

Query: 145  KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 2
            KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK
Sbjct: 1270 KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1317


>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  756 bits (1952), Expect = 0.0
 Identities = 369/408 (90%), Positives = 378/408 (92%)
 Frame = -1

Query: 1225 SLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGHT 1046
            SLVREDKIEEF+A               PVED TTTLDDFKE L DKF+REIF  AHGHT
Sbjct: 910  SLVREDKIEEFTAIPAEAKHVAPPCTHFPVEDGTTTLDDFKEELRDKFDREIFNPAHGHT 969

Query: 1045 NCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHK 866
            NCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEANL EFRAKKDLGDILW NY K
Sbjct: 970  NCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDLGDILWENYRK 1029

Query: 865  AMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQWV 686
            AMKLP EQP+FSEDLW RCAEEVQNTYLKKS+SQIKGGERRQSPDFHEHQILIFLKSQWV
Sbjct: 1030 AMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQILIFLKSQWV 1089

Query: 685  KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSR 506
            KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLSR
Sbjct: 1090 KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLSR 1149

Query: 505  WVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFL 326
            WVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF+
Sbjct: 1150 WVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFM 1209

Query: 325  GTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALL 146
            GTL+IMRLTGEGP FDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVCPEKPSF+LL
Sbjct: 1210 GTLTIMRLTGEGPAFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVCPEKPSFSLL 1269

Query: 145  KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 2
            KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK
Sbjct: 1270 KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1317


>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  755 bits (1949), Expect = 0.0
 Identities = 368/408 (90%), Positives = 378/408 (92%)
 Frame = -1

Query: 1225 SLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGHT 1046
            SLVREDKIEEF+A               PVED TTTLDDFKE L DKF+REIF  AHGHT
Sbjct: 910  SLVREDKIEEFTAIPAEAKHVAPPCTHFPVEDGTTTLDDFKEELRDKFDREIFNPAHGHT 969

Query: 1045 NCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHK 866
            NCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEANL EFRAKKDLGDILW NY K
Sbjct: 970  NCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDLGDILWENYRK 1029

Query: 865  AMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQWV 686
            AMKLP EQP+FSEDLW RCAEEVQNTYLKKS+SQIKGGERRQSPDFHEH ILIFLKSQWV
Sbjct: 1030 AMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHHILIFLKSQWV 1089

Query: 685  KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSR 506
            KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCE+TPQDLSR
Sbjct: 1090 KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCERTPQDLSR 1149

Query: 505  WVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFL 326
            WVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF+
Sbjct: 1150 WVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFM 1209

Query: 325  GTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALL 146
            GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVCPEKPSF+LL
Sbjct: 1210 GTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVCPEKPSFSLL 1269

Query: 145  KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 2
            KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK
Sbjct: 1270 KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1317


>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  754 bits (1948), Expect = 0.0
 Identities = 369/408 (90%), Positives = 378/408 (92%)
 Frame = -1

Query: 1225 SLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGHT 1046
            SLVREDKIEEF+A               PVED TTTLDDFKE L DKF+REIF  AHGHT
Sbjct: 910  SLVREDKIEEFTAIPAEAKRVAPPCTHFPVEDGTTTLDDFKEELRDKFDREIFNPAHGHT 969

Query: 1045 NCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHK 866
            NCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEANL EFRAKKDLGDILW NY K
Sbjct: 970  NCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDLGDILWENYRK 1029

Query: 865  AMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQWV 686
            AMKLP EQP+FSEDLW RCAEEVQNTYLKKS+SQIKGGERRQSPDFHEHQILIFLKSQWV
Sbjct: 1030 AMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQILIFLKSQWV 1089

Query: 685  KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSR 506
            KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLSR
Sbjct: 1090 KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLSR 1149

Query: 505  WVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFL 326
            WVLN WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF+
Sbjct: 1150 WVLNCWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFM 1209

Query: 325  GTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALL 146
            GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVCPEKPSF+LL
Sbjct: 1210 GTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVCPEKPSFSLL 1269

Query: 145  KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 2
            KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK
Sbjct: 1270 KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1317


>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  754 bits (1948), Expect = 0.0
 Identities = 369/408 (90%), Positives = 378/408 (92%)
 Frame = -1

Query: 1225 SLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGHT 1046
            SLVREDKIEEF+A               PVED TTTLDDFKE L DKF+REIF  AHGHT
Sbjct: 910  SLVREDKIEEFTAIPAEAKRVAPPCTHFPVEDGTTTLDDFKEELRDKFDREIFNPAHGHT 969

Query: 1045 NCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHK 866
            NCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEANL EFRAKKDLGDILW NY K
Sbjct: 970  NCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDLGDILWENYRK 1029

Query: 865  AMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQWV 686
            AMKLP EQP+FSEDLW RCAEEVQNTYLKKS+SQIKGGERRQSPDFHEHQILIFLKSQWV
Sbjct: 1030 AMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQILIFLKSQWV 1089

Query: 685  KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSR 506
            KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLSR
Sbjct: 1090 KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLSR 1149

Query: 505  WVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFL 326
            WVLN WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF+
Sbjct: 1150 WVLNCWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFM 1209

Query: 325  GTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALL 146
            GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVCPEKPSF+LL
Sbjct: 1210 GTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVCPEKPSFSLL 1269

Query: 145  KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 2
            KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK
Sbjct: 1270 KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1317


>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  754 bits (1948), Expect = 0.0
 Identities = 369/408 (90%), Positives = 378/408 (92%)
 Frame = -1

Query: 1225 SLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGHT 1046
            SLVREDKIEEF+A               PVED TTTLDDFKE L DKF+REIF  AHGHT
Sbjct: 910  SLVREDKIEEFTAIPAEAKRVAPPCTHFPVEDGTTTLDDFKEELRDKFDREIFNPAHGHT 969

Query: 1045 NCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHK 866
            NCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEANL EFRAKKDLGDILW NY K
Sbjct: 970  NCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDLGDILWENYRK 1029

Query: 865  AMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQWV 686
            AMKLP EQP+FSEDLW RCAEEVQNTYLKKS+SQIKGGERRQSPDFHEHQILIFLKSQWV
Sbjct: 1030 AMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQILIFLKSQWV 1089

Query: 685  KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSR 506
            KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLSR
Sbjct: 1090 KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLSR 1149

Query: 505  WVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFL 326
            WVLN WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF+
Sbjct: 1150 WVLNCWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFM 1209

Query: 325  GTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALL 146
            GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVCPEKPSF+LL
Sbjct: 1210 GTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVCPEKPSFSLL 1269

Query: 145  KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 2
            KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK
Sbjct: 1270 KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1317


>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
            gi|1173174|sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA
            replication protein; AltName: Full=156 kDa protein;
            AltName: Full=ORF1 protein; Includes: RecName:
            Full=RNA-directed RNA polymerase; Includes: RecName:
            Full=Helicase gi|311645|emb|CAA79761.1| 156K-protein
            [Plantago asiatica mosaic virus]
          Length = 1385

 Score =  751 bits (1939), Expect = 0.0
 Identities = 366/408 (89%), Positives = 378/408 (92%)
 Frame = -1

Query: 1225 SLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGHT 1046
            SLVREDKI EF A               PVE+  TTLDDFKE L DKF+REIFT   GHT
Sbjct: 915  SLVREDKITEFQAPADAPKPVTPPVTHFPVEEPATTLDDFKEELRDKFDREIFTSDRGHT 974

Query: 1045 NCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHK 866
            NCVQ DDPTTQLFSHQQAKDEALLWE I+ARL ISTPEAN+EEFRAKKDLGDILW NYH+
Sbjct: 975  NCVQTDDPTTQLFSHQQAKDEALLWEMIRARLKISTPEANIEEFRAKKDLGDILWVNYHR 1034

Query: 865  AMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQWV 686
            AM LPKEQP+FSEDLW RCAEEVQNTYLKK+++Q+KGGERRQSPDFHEHQILIFLKSQWV
Sbjct: 1035 AMGLPKEQPDFSEDLWNRCAEEVQNTYLKKTMAQLKGGERRQSPDFHEHQILIFLKSQWV 1094

Query: 685  KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSR 506
            KKMEKLGAK+IKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSR
Sbjct: 1095 KKMEKLGAKEIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSR 1154

Query: 505  WVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFL 326
            WVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFL
Sbjct: 1155 WVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFL 1214

Query: 325  GTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALL 146
            GTLSIMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVCPEKPSFALL
Sbjct: 1215 GTLSIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVCPEKPSFALL 1274

Query: 145  KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 2
            KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK
Sbjct: 1275 KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1322


>gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
            virus]
          Length = 711

 Score =  749 bits (1935), Expect = 0.0
 Identities = 363/408 (88%), Positives = 380/408 (93%)
 Frame = -1

Query: 1225 SLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGHT 1046
            SLVRED++ EFSA               PVED TTTLDDF+E L DKF+REIF +AHGHT
Sbjct: 241  SLVREDRVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREELQDKFDREIFNQAHGHT 300

Query: 1045 NCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHK 866
            NCVQ D+PTTQLF+HQQAKDEALLWETI ARLTIS+PEANL EFRAKKDLGDILW NY K
Sbjct: 301  NCVQTDNPTTQLFAHQQAKDEALLWETINARLTISSPEANLAEFRAKKDLGDILWENYRK 360

Query: 865  AMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQWV 686
            AMKLP EQP+FSEDLWTRCAEEVQNTYLKKS++QIKGG+RRQSPDFHEHQILIFLKSQWV
Sbjct: 361  AMKLPNEQPDFSEDLWTRCAEEVQNTYLKKSVAQIKGGDRRQSPDFHEHQILIFLKSQWV 420

Query: 685  KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSR 506
            KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLSR
Sbjct: 421  KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLSR 480

Query: 505  WVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFL 326
            WVLN+WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFL
Sbjct: 481  WVLNHWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFL 540

Query: 325  GTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALL 146
            GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEG AQIYAGDDCAI+QVCPEKPSF+LL
Sbjct: 541  GTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGAAQIYAGDDCAISQVCPEKPSFSLL 600

Query: 145  KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 2
            KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK
Sbjct: 601  KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 648


>ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X]
            gi|23491554|dbj|BAC16785.1| RNA-dependent RNA polymerase
            [Tulip virus X]
          Length = 1361

 Score =  662 bits (1707), Expect = 0.0
 Identities = 323/408 (79%), Positives = 353/408 (86%)
 Frame = -1

Query: 1225 SLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGHT 1046
            SLVRE K+EEF+A               PVE+ + TL   ++SL+DK++REI    HG T
Sbjct: 891  SLVREHKLEEFTAVEDPPQEVAPPVTHFPVENASHTLGLIQDSLADKYDREILNTNHGFT 950

Query: 1045 NCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHK 866
            NCVQ +D T QLFSHQQAKDEALLWETI ARL +STPEANL EF AKKDLGD+LW NYH+
Sbjct: 951  NCVQTEDLTVQLFSHQQAKDEALLWETIDARLRLSTPEANLAEFHAKKDLGDVLWENYHR 1010

Query: 865  AMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQWV 686
            AMKLPKEQP+FS +LW RCA EVQ TYL KS+ QIKGGERRQSPDF E++ILIFLKSQWV
Sbjct: 1011 AMKLPKEQPDFSPELWERCAAEVQQTYLSKSLQQIKGGERRQSPDFPENKILIFLKSQWV 1070

Query: 685  KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSR 506
            KKMEKLGA KIKPGQTIASFQQ AVMLYGTMARYMRR+RDAL PNNIMINCE+TP DLSR
Sbjct: 1071 KKMEKLGAPKIKPGQTIASFQQAAVMLYGTMARYMRRYRDALGPNNIMINCERTPADLSR 1130

Query: 505  WVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFL 326
            WV N+WDF+KP YANDFTAFDQSQDGAMLQFEILKAK+FNLPEWVIEGYLDIKL+P+IF 
Sbjct: 1131 WVRNHWDFTKPXYANDFTAFDQSQDGAMLQFEILKAKFFNLPEWVIEGYLDIKLTPQIFT 1190

Query: 325  GTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALL 146
            GTL+IMRLTGEGPTFDANTECNIAYTHTRF IP+  AQ+YAGDDCAIA+VC EKPSFALL
Sbjct: 1191 GTLAIMRLTGEGPTFDANTECNIAYTHTRFHIPDHVAQLYAGDDCAIAEVCQEKPSFALL 1250

Query: 145  KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 2
            KNRIALQAKPAY PQ RG WAEFCGYLITPKGLIKDPLKLH+SLELAK
Sbjct: 1251 KNRIALQAKPAYAPQTRGAWAEFCGYLITPKGLIKDPLKLHSSLELAK 1298


>gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]
          Length = 1386

 Score =  580 bits (1495), Expect = e-163
 Identities = 288/406 (70%), Positives = 321/406 (79%)
 Frame = -1

Query: 1225 SLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGHT 1046
            S VRE+ I                    PVE+ +  L  + E + +KFEREIFTE  GHT
Sbjct: 917  STVREEAIAAHQLPNADPRPDPEPKTHFPVENTSCALGAYMEKVPEKFEREIFTEDRGHT 976

Query: 1045 NCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHK 866
            NCVQ  +P  QLF HQQAKDEALLWETIKARLTIS+PEAN EEF  KKD+GDILW +Y K
Sbjct: 977  NCVQTQNPLVQLFPHQQAKDEALLWETIKARLTISSPEANWEEFYRKKDIGDILWLHYKK 1036

Query: 865  AMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQWV 686
            AM LP+E   FSEDLW   A EVQNTYL K ++ +K GERRQSPDF +HQIL+FLKSQWV
Sbjct: 1037 AMTLPEEPLPFSEDLWRLSAAEVQNTYLSKPMNMLKNGERRQSPDFEKHQILLFLKSQWV 1096

Query: 685  KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSR 506
            KKMEKLG  KIK GQTIASFQQHAVMLYGTMARYMRRFR+ L PN+I INCE TP+DLSR
Sbjct: 1097 KKMEKLGGPKIKAGQTIASFQQHAVMLYGTMARYMRRFREVLGPNHIKINCEATPKDLSR 1156

Query: 505  WVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFL 326
            ++ NYWDF   SYANDFTAFDQSQDGAMLQFEILKAK+FN+PE +I+GYLDIKL+ KIFL
Sbjct: 1157 FIQNYWDFKPASYANDFTAFDQSQDGAMLQFEILKAKHFNIPEEIIQGYLDIKLNAKIFL 1216

Query: 325  GTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALL 146
            G L IMRLTGEGPTFDANTECNIAYTHTRF+IP GTAQ+YAGDD AIA V PE+PSF L+
Sbjct: 1217 GVLGIMRLTGEGPTFDANTECNIAYTHTRFDIPPGTAQLYAGDDSAIACVPPERPSFKLI 1276

Query: 145  KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLEL 8
               +AL+AKP Y PQ  G WAEFCGYLITPKGLIKDP KL ASL+L
Sbjct: 1277 AKSLALEAKPVYAPQVAGAWAEFCGYLITPKGLIKDPAKLFASLKL 1322


>ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|56792005|gb|AAW30448.1|
            viral replicase [Hydrangea ringspot virus]
          Length = 1386

 Score =  577 bits (1486), Expect = e-162
 Identities = 287/406 (70%), Positives = 320/406 (78%)
 Frame = -1

Query: 1225 SLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGHT 1046
            S VRE+ I                    PVE+ +  L  + E + +KFEREIFTE  GHT
Sbjct: 917  STVREEAIAAHQLPSADPRPDPEPKTHFPVENTSCALGAYMEKVPEKFEREIFTEDRGHT 976

Query: 1045 NCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHK 866
            NCVQ  +P  QLF HQQAKDEALLWETIKARLTIS+PEAN EEF  KKD+GDILW +Y K
Sbjct: 977  NCVQTQNPLVQLFPHQQAKDEALLWETIKARLTISSPEANWEEFYKKKDIGDILWLHYKK 1036

Query: 865  AMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQWV 686
            AM LP+E   FSEDLW   A EVQNTYL K ++ +K GERRQSPDF +HQIL+FLKSQWV
Sbjct: 1037 AMTLPEEPLPFSEDLWRLSAAEVQNTYLSKPMNMLKNGERRQSPDFEKHQILLFLKSQWV 1096

Query: 685  KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSR 506
            KKMEKLG  KIK GQTIASFQQHAVMLYGTMARYMRRFR+AL PN+I INCE TP+DLSR
Sbjct: 1097 KKMEKLGGPKIKAGQTIASFQQHAVMLYGTMARYMRRFREALGPNHIKINCEATPKDLSR 1156

Query: 505  WVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFL 326
            ++ NYWDF   SYANDFTAFDQSQD AMLQFEILKAK+FN+P  +I+GYLDIKL+ KIFL
Sbjct: 1157 FIQNYWDFKPASYANDFTAFDQSQDAAMLQFEILKAKHFNIPGEIIQGYLDIKLNAKIFL 1216

Query: 325  GTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALL 146
            G L IMRLTGEGPTFDANTECNIAYTHTRF+IP GTAQ+YAGDD AIA V PE+PSF L+
Sbjct: 1217 GVLGIMRLTGEGPTFDANTECNIAYTHTRFDIPPGTAQLYAGDDSAIACVPPERPSFKLI 1276

Query: 145  KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLEL 8
               +AL+AKP Y PQ  G WAEFCGYLITPKGLIKDP KL ASL+L
Sbjct: 1277 AKSLALEAKPVYAPQVAGAWAEFCGYLITPKGLIKDPAKLFASLKL 1322


>ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mosaic virus]
            gi|773405|gb|AAC54775.1| ORF 1; putative RNA dependent
            RNA polymerase [Cassava common mosaic virus]
            gi|1587823|prf||2207297A ORF 1
          Length = 1449

 Score =  538 bits (1387), Expect = e-150
 Identities = 277/413 (67%), Positives = 310/413 (75%), Gaps = 5/413 (1%)
 Frame = -1

Query: 1225 SLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGHT 1046
            S+VREDKI E+                 PVE+  T L++F E L+ K EREIF E+HGHT
Sbjct: 985  SMVREDKILEWRPKEPEPAKEEPPKTHFPVENGNTILEEFTEELAQKHEREIFNESHGHT 1044

Query: 1045 NCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHK 866
            NCVQ D+   Q  SHQQAKDEALLWETIKARL IS  + N  EF  KKD+GDILW NY +
Sbjct: 1045 NCVQTDNKIIQTLSHQQAKDEALLWETIKARLVISHKQHNWTEFVKKKDIGDILWLNYKR 1104

Query: 865  AMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQWV 686
            AM LP++   F E+LW   A E+Q+TYL KS   +K GERRQSPDF E  ILIFLKSQWV
Sbjct: 1105 AMHLPEDPIPF-EELWELAAREIQHTYLSKSTQMLKNGERRQSPDFGEKDILIFLKSQWV 1163

Query: 685  KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSR 506
            KKMEKLGA KIKPGQTIASFQQ AVMLYGTMARYMRR RD   P +IMINCE+TP DLS 
Sbjct: 1164 KKMEKLGAPKIKPGQTIASFQQSAVMLYGTMARYMRRIRDIYMPEHIMINCERTPTDLSY 1223

Query: 505  WVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFL 326
            W LNYW+F KPSYANDFTAFDQSQDGAMLQFEILKAK+ N+PEWV+EGYLDIKL  +IFL
Sbjct: 1224 WALNYWNFDKPSYANDFTAFDQSQDGAMLQFEILKAKHHNIPEWVLEGYLDIKLDSRIFL 1283

Query: 325  GTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALL 146
            GTLSIMRLTGE  TFDANTECNIAYTHTRF+IPEG AQ     D A+   C EKPSF L+
Sbjct: 1284 GTLSIMRLTGEYQTFDANTECNIAYTHTRFDIPEGVAQ-----DSAMDATCLEKPSFKLI 1338

Query: 145  KNRIALQ-----AKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 2
            ++ ++L+      KP    Q  G+WAEFCGYLITPKGLIKDPLKL AS  LAK
Sbjct: 1339 ESELSLKLYAGDCKPCLKAQIPGEWAEFCGYLITPKGLIKDPLKLAASFRLAK 1391


>ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|ACN58194.1| replicase
            [Allium virus X]
          Length = 1701

 Score =  530 bits (1366), Expect = e-148
 Identities = 257/405 (63%), Positives = 312/405 (77%)
 Frame = -1

Query: 1216 REDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGHTNCV 1037
            RE++++E                  PVE++   L++  E L +K +REI    HGHTNCV
Sbjct: 1241 REERLKESQPREQEPTEPEGPTTHFPVENEKFVLEEQVEELLEKHDREILRPDHGHTNCV 1300

Query: 1036 QGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHKAMK 857
            Q +D   QLFSHQQAKD+ALLW TI+ARL IS P+AN+ EF AKK++GD+L+ +YH+AMK
Sbjct: 1301 QTEDAVIQLFSHQQAKDQALLWATIEARLKISNPKANIAEFNAKKEIGDVLFEHYHQAMK 1360

Query: 856  LPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQWVKKM 677
            LP +   F EDLW  CA+EVQ TYL K I+ +K GE RQSPDF ++ I +FLKSQWVKKM
Sbjct: 1361 LPDKPIPFMEDLWVACAQEVQGTYLSKPINMLKNGEYRQSPDFDKNTIALFLKSQWVKKM 1420

Query: 676  EKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVL 497
            EKLGA KIKPGQTIASFQQ AVMLYGTMARYMRR R+A  P  IMINCEK PQ LS W+ 
Sbjct: 1421 EKLGAPKIKPGQTIASFQQSAVMLYGTMARYMRRMREAFQPPEIMINCEKDPQTLSHWIQ 1480

Query: 496  NYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTL 317
            NYW F+  +YANDFT FDQSQDGAMLQFEILKAK+ ++PEWV+EGYLDIK + K+F G L
Sbjct: 1481 NYWKFNSYAYANDFTQFDQSQDGAMLQFEILKAKHHSIPEWVLEGYLDIKTNAKVFSGVL 1540

Query: 316  SIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNR 137
            SIMRLTGEGPTFDANTECNIAYTH RF++P+GTAQ+YAGDD A++ + PE+PSFA  K +
Sbjct: 1541 SIMRLTGEGPTFDANTECNIAYTHLRFDVPKGTAQLYAGDDSALSCLPPERPSFADFKQQ 1600

Query: 136  IALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 2
            + L +KPA   Q+RG WAEFCGYLITP G++KDP KL A++ LA+
Sbjct: 1601 LTLTSKPALFAQKRGFWAEFCGYLITPLGIMKDPAKLAATVVLAQ 1645


>gb|AFM77886.1| replicase [Hosta virus X]
          Length = 1473

 Score =  519 bits (1336), Expect = e-144
 Identities = 252/406 (62%), Positives = 302/406 (74%)
 Frame = -1

Query: 1222 LVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGHTN 1043
            L RE+KI E +                PVE          E + +K  REI+ + HGHTN
Sbjct: 991  LTREEKINEITPEEPKPKEPEPPKTHFPVETSAHLYSSITEEMPEKHAREIYNKTHGHTN 1050

Query: 1042 CVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHKA 863
            CVQ D+P  Q+F+HQQAKDEAL WETI+ARL I+T EAN++E   K+D+GD+L+  YHKA
Sbjct: 1051 CVQTDEPLVQMFAHQQAKDEALFWETIEARLRITTSEANVQELNEKRDIGDLLFHAYHKA 1110

Query: 862  MKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQWVK 683
            M LPK+   F  DLW  CA+EVQ TYL K I+ IK GE+RQ PDF ++ I++FLKSQWVK
Sbjct: 1111 MGLPKDPIPFENDLWETCAQEVQQTYLSKPINLIKNGEKRQGPDFDKNAIMLFLKSQWVK 1170

Query: 682  KMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRW 503
            KMEKLGA  IKPGQTIASF Q  VMLYGTMARYMRR RD   P +I+INCEKTP  +S +
Sbjct: 1171 KMEKLGAPTIKPGQTIASFHQITVMLYGTMARYMRRIRDRFCPKHILINCEKTPTQISDF 1230

Query: 502  VLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLG 323
            V   WDFS  +YANDFTAFDQSQDGAMLQFEI+KAK+ N+PE +I GY+DIK + KIFLG
Sbjct: 1231 VKAQWDFSDFAYANDFTAFDQSQDGAMLQFEIIKAKFHNIPEDIILGYMDIKTNAKIFLG 1290

Query: 322  TLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLK 143
            TL+IMRLTGEGPTFDANTECNIAYTH RF +PE  AQ+YAGDD A+++VCPEK SF    
Sbjct: 1291 TLAIMRLTGEGPTFDANTECNIAYTHLRFNVPENVAQVYAGDDSALSKVCPEKDSFKQFA 1350

Query: 142  NRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELA 5
            +R+ L++KP   PQ +G WAEFCG LITP+G+IKDP+KLHAS  LA
Sbjct: 1351 DRLTLKSKPQVFPQTQGAWAEFCGLLITPRGIIKDPVKLHASWVLA 1396


>ref|YP_002308464.1| replicase [Hosta virus X] gi|58415284|emb|CAF04078.1| replicase
            [Hosta virus X]
          Length = 1507

 Score =  519 bits (1336), Expect = e-144
 Identities = 252/406 (62%), Positives = 302/406 (74%)
 Frame = -1

Query: 1222 LVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGHTN 1043
            L RE+KI E +                PVE          E + +K  REI+ + HGHTN
Sbjct: 1025 LTREEKINEITPEEPKPKEPEPPKTHFPVETSAHLYSSITEEMPEKHAREIYNKTHGHTN 1084

Query: 1042 CVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHKA 863
            CVQ D+P  Q+F+HQQAKDEAL WETI+ARL I+T EAN++E   K+D+GD+L+  YHKA
Sbjct: 1085 CVQTDEPLVQMFAHQQAKDEALFWETIEARLRITTSEANVQELNEKRDIGDLLFHAYHKA 1144

Query: 862  MKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQWVK 683
            M LPK+   F  DLW  CA+EVQ TYL K I+ IK GE+RQ PDF ++ I++FLKSQWVK
Sbjct: 1145 MGLPKDPIPFENDLWETCAQEVQQTYLSKPINLIKNGEKRQGPDFDKNAIMLFLKSQWVK 1204

Query: 682  KMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRW 503
            KMEKLGA  IKPGQTIASF Q  VMLYGTMARYMRR RD   P +I+INCEKTP  +S +
Sbjct: 1205 KMEKLGAPTIKPGQTIASFHQITVMLYGTMARYMRRIRDRFCPKHILINCEKTPTQISDF 1264

Query: 502  VLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLG 323
            V   WDFS  +YANDFTAFDQSQDGAMLQFEI+KAK+ N+PE +I GY+DIK + KIFLG
Sbjct: 1265 VKAQWDFSDFAYANDFTAFDQSQDGAMLQFEIIKAKFHNIPEDIILGYMDIKTNAKIFLG 1324

Query: 322  TLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLK 143
            TL+IMRLTGEGPTFDANTECNIAYTH RF +PE  AQ+YAGDD A+++VCPEK SF    
Sbjct: 1325 TLAIMRLTGEGPTFDANTECNIAYTHLRFNVPENVAQVYAGDDSALSKVCPEKDSFKQFA 1384

Query: 142  NRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELA 5
            +R+ L++KP   PQ +G WAEFCG LITP+G+IKDP+KLHAS  LA
Sbjct: 1385 DRLTLKSKPQVFPQTQGAWAEFCGLLITPRGIIKDPVKLHASWVLA 1430


>ref|NP_077079.1| replicase [Clover yellow mosaic virus]
          Length = 1670

 Score =  517 bits (1331), Expect = e-144
 Identities = 248/407 (60%), Positives = 309/407 (75%)
 Frame = -1

Query: 1225 SLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGHT 1046
            S +RED++ E                  PVE++  +L+D  E L +K ERE+++  HG++
Sbjct: 1206 STLREDRLREEGPKPETPEEPKPATTHFPVENENLSLEDKVEELLEKHERELYSSDHGYS 1265

Query: 1045 NCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHK 866
            NCVQ DDP  QLFSHQQAKD+ LLW TI+ARL IS P+AN+EEFR KK++GD+LW NY +
Sbjct: 1266 NCVQTDDPVVQLFSHQQAKDQTLLWATIEARLKISNPKANMEEFRMKKNVGDVLWLNYKR 1325

Query: 865  AMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQWV 686
            AMKLP +  EFS +LW  CAEEVQ TYL K ++ IK GE RQSPDF +H I +FLKSQWV
Sbjct: 1326 AMKLPDKPIEFSHELWHACAEEVQKTYLSKPLNMIKNGENRQSPDFDKHTISLFLKSQWV 1385

Query: 685  KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSR 506
            KK+EKLGA KIKPGQTIASFQQ  VMLYGTMARYMRR R A  P NI +NCE+TPQ L+ 
Sbjct: 1386 KKLEKLGAPKIKPGQTIASFQQATVMLYGTMARYMRRIRQAFQPPNIQLNCEQTPQQLTT 1445

Query: 505  WVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFL 326
            ++ + W F +P+YANDFT FDQSQDGAMLQFE+LKAK+ N+PE +I+GY+DIK + K+F 
Sbjct: 1446 FIKDQWSFDQPAYANDFTQFDQSQDGAMLQFEVLKAKHHNIPEAIIQGYIDIKTNAKVFT 1505

Query: 325  GTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALL 146
            G L+IMRLTGEGPTFDANTECNIA+ HTRF I + TAQ+YAGDD A +++  EK SF  +
Sbjct: 1506 GVLAIMRLTGEGPTFDANTECNIAFNHTRFHISDDTAQLYAGDDTAFSKIPIEKVSFQGV 1565

Query: 145  KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELA 5
              ++AL +KP +  Q++G+WAEFCGY ITP GLIK+P KL A+L LA
Sbjct: 1566 AKQLALTSKPLFYKQKKGEWAEFCGYSITPLGLIKEPKKLQANLTLA 1612


>gb|AAF67818.1|AF111193_1 replicase [Potato virus X]
          Length = 1456

 Score =  515 bits (1327), Expect = e-143
 Identities = 245/408 (60%), Positives = 310/408 (75%)
 Frame = -1

Query: 1225 SLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGHT 1046
            S+VRE  ++E+                  VE++ + L+++KE L +KF+REI +E+HGH+
Sbjct: 987  SVVREQTLKEYEPAEVEPIREPEPQTHMCVENEESVLEEYKEELLEKFDREIHSESHGHS 1046

Query: 1045 NCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHK 866
            NCVQ +D T QLFSHQQAKDE LLW TI ARL  S  E N  EF +KKD+GD+L+ NY K
Sbjct: 1047 NCVQTEDTTIQLFSHQQAKDETLLWATIDARLKTSNQETNFREFLSKKDIGDVLFLNYQK 1106

Query: 865  AMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQWV 686
            AM LPKE+  FS+++W  CA EVQ+ YL KS   +  G  RQSPDF E++I++FLKSQWV
Sbjct: 1107 AMGLPKERIPFSQEVWEACAHEVQSKYLSKSKCNLINGTVRQSPDFDENKIMVFLKSQWV 1166

Query: 685  KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSR 506
             K+EKLG  KIKPGQTIA+F Q  VML+GTMARYMR FR A  P  + INCE TP+D+S 
Sbjct: 1167 TKVEKLGLPKIKPGQTIAAFYQQTVMLFGTMARYMRWFRQAFQPKEVFINCETTPEDMSA 1226

Query: 505  WVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFL 326
            W LN W+F +PS AND+TAFDQSQDGAMLQFE+LKAK+  +PE +I+ Y+DIK + +IFL
Sbjct: 1227 WALNNWNFGRPSLANDYTAFDQSQDGAMLQFEVLKAKHHCIPEEIIQAYIDIKTNAQIFL 1286

Query: 325  GTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALL 146
            GTLSIMRLTGEGPTFDANTECNIAYTHT+F+IP GTAQ+YAGDD A+  V   KPSF  L
Sbjct: 1287 GTLSIMRLTGEGPTFDANTECNIAYTHTKFDIPAGTAQVYAGDDSALDCVPEVKPSFHRL 1346

Query: 145  KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 2
            ++++ L++KP  T Q++G W EFCG+LITPKG++KDP+KLH SL+LA+
Sbjct: 1347 EDKLLLKSKPVITQQKKGSWPEFCGWLITPKGVMKDPIKLHVSLKLAE 1394


>gb|ABP87980.1| RNA dependent RNA polymerase [Potato virus X]
          Length = 1456

 Score =  515 bits (1327), Expect = e-143
 Identities = 246/408 (60%), Positives = 310/408 (75%)
 Frame = -1

Query: 1225 SLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGHT 1046
            S+VRE  ++E+                  VE++ + L+++KE L +KF+REI +E+HGH+
Sbjct: 987  SVVREQALKEYEPAEVESIREPEPQTHMCVENEESVLEEYKEELLEKFDREIHSESHGHS 1046

Query: 1045 NCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHK 866
            NCVQ +D T QLFSHQQAKDE LLW TI ARL  S  E N  EF +KKD+GD+L+ NY K
Sbjct: 1047 NCVQTEDTTIQLFSHQQAKDETLLWATIDARLKTSNQETNFREFLSKKDIGDVLFLNYQK 1106

Query: 865  AMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQWV 686
            AM LPKE+  FS+++W  CA EVQ+ YL KS   +  G  RQSPDF E++I++FLKSQWV
Sbjct: 1107 AMGLPKERIPFSQEVWEACAHEVQSKYLSKSKCNLINGTVRQSPDFDENKIMVFLKSQWV 1166

Query: 685  KKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSR 506
             K+EKLG  KIKPGQTIA+F Q  VML+GTMARYMR FR A  P  + INCE TP+D+S 
Sbjct: 1167 TKVEKLGLPKIKPGQTIAAFYQQTVMLFGTMARYMRWFRQAFQPKEVFINCETTPEDMSA 1226

Query: 505  WVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFL 326
            WVLN WDF +PS AND+TAFDQSQDGAMLQFE+LKAK+  +PE +I+ Y+DIK + +IFL
Sbjct: 1227 WVLNNWDFGRPSLANDYTAFDQSQDGAMLQFEVLKAKHHCIPEEIIQAYIDIKTNAQIFL 1286

Query: 325  GTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALL 146
            GTLSIMRLTGEGPTFDANTECNIAYTHT+F+IP GTAQ+YAGDD A+  V   K SF  L
Sbjct: 1287 GTLSIMRLTGEGPTFDANTECNIAYTHTKFDIPAGTAQVYAGDDSALDCVPEVKHSFHRL 1346

Query: 145  KNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 2
            ++++ L++KP  T Q++G W EFCG+LITPKG++KDP+KLH SL+LA+
Sbjct: 1347 EDKLLLKSKPVITQQKKGSWPEFCGWLITPKGVMKDPIKLHVSLKLAE 1394