BLASTX nr result
ID: Achyranthes23_contig00013560
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00013560
(659 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006399468.1| hypothetical protein EUTSA_v10013991mg [Eutr... 60 6e-07
ref|XP_006288046.1| hypothetical protein CARUB_v10001280mg [Caps... 60 8e-07
ref|NP_568218.1| transcription elongation factor (TFIIS) family ... 60 8e-07
dbj|BAB09406.1| unnamed protein product [Arabidopsis thaliana] 60 8e-07
ref|XP_002873427.1| predicted protein [Arabidopsis lyrata subsp.... 60 8e-07
ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymera... 59 2e-06
ref|XP_002300207.1| hypothetical protein POPTR_0001s31510g [Popu... 58 3e-06
ref|XP_002530078.1| conserved hypothetical protein [Ricinus comm... 57 6e-06
gb|EXB36907.1| hypothetical protein L484_016512 [Morus notabilis] 56 8e-06
gb|EOY19920.1| Transcription elongation factor (TFIIS) family pr... 56 8e-06
gb|EOY19919.1| Transcription elongation factor (TFIIS) family pr... 56 8e-06
>ref|XP_006399468.1| hypothetical protein EUTSA_v10013991mg [Eutrema salsugineum]
gi|312281771|dbj|BAJ33751.1| unnamed protein product
[Thellungiella halophila] gi|557100558|gb|ESQ40921.1|
hypothetical protein EUTSA_v10013991mg [Eutrema
salsugineum]
Length = 348
Score = 60.1 bits (144), Expect = 6e-07
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +2
Query: 551 MDLDDFRTILGNTGVDIWGFIETAVKVASLDYGDEL 658
MDLDDFR+I+ N GVD+W FI+TA+ VASLDYG EL
Sbjct: 1 MDLDDFRSIMDNAGVDVWTFIDTAILVASLDYGQEL 36
>ref|XP_006288046.1| hypothetical protein CARUB_v10001280mg [Capsella rubella]
gi|482556752|gb|EOA20944.1| hypothetical protein
CARUB_v10001280mg [Capsella rubella]
Length = 355
Score = 59.7 bits (143), Expect = 8e-07
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +2
Query: 551 MDLDDFRTILGNTGVDIWGFIETAVKVASLDYGDEL 658
MDLDDFR+I+ N GVD+W FI+TA+ VASLDYG EL
Sbjct: 1 MDLDDFRSIMENAGVDVWTFIDTAILVASLDYGQEL 36
>ref|NP_568218.1| transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana] gi|395406779|sp|F4KFC7.1|MD26C_ARATH RecName:
Full=Probable mediator of RNA polymerase II
transcription subunit 26c gi|332004072|gb|AED91455.1|
transcription elongation factor (TFIIS) family protein
[Arabidopsis thaliana]
Length = 353
Score = 59.7 bits (143), Expect = 8e-07
Identities = 25/36 (69%), Positives = 31/36 (86%)
Frame = +2
Query: 551 MDLDDFRTILGNTGVDIWGFIETAVKVASLDYGDEL 658
MDLDDFR+++ N GVD+W FI+TA+ VASLDYG EL
Sbjct: 1 MDLDDFRSVMDNAGVDVWTFIDTAILVASLDYGQEL 36
>dbj|BAB09406.1| unnamed protein product [Arabidopsis thaliana]
Length = 361
Score = 59.7 bits (143), Expect = 8e-07
Identities = 25/36 (69%), Positives = 31/36 (86%)
Frame = +2
Query: 551 MDLDDFRTILGNTGVDIWGFIETAVKVASLDYGDEL 658
MDLDDFR+++ N GVD+W FI+TA+ VASLDYG EL
Sbjct: 1 MDLDDFRSVMDNAGVDVWTFIDTAILVASLDYGQEL 36
>ref|XP_002873427.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319264|gb|EFH49686.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 364
Score = 59.7 bits (143), Expect = 8e-07
Identities = 25/36 (69%), Positives = 31/36 (86%)
Frame = +2
Query: 551 MDLDDFRTILGNTGVDIWGFIETAVKVASLDYGDEL 658
MDLDDFR+++ N GVD+W FI+TA+ VASLDYG EL
Sbjct: 1 MDLDDFRSVMDNAGVDVWTFIDTAILVASLDYGQEL 36
>ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Cucumis sativus]
gi|449528150|ref|XP_004171069.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26c-like [Cucumis sativus]
Length = 345
Score = 58.5 bits (140), Expect = 2e-06
Identities = 25/36 (69%), Positives = 32/36 (88%)
Frame = +2
Query: 551 MDLDDFRTILGNTGVDIWGFIETAVKVASLDYGDEL 658
+DLDDFRTIL GVD+W FI+TA++VASLDYG++L
Sbjct: 4 LDLDDFRTILDTAGVDVWTFIDTAMEVASLDYGNQL 39
>ref|XP_002300207.1| hypothetical protein POPTR_0001s31510g [Populus trichocarpa]
gi|222847465|gb|EEE85012.1| hypothetical protein
POPTR_0001s31510g [Populus trichocarpa]
Length = 361
Score = 57.8 bits (138), Expect = 3e-06
Identities = 24/36 (66%), Positives = 32/36 (88%)
Frame = +2
Query: 551 MDLDDFRTILGNTGVDIWGFIETAVKVASLDYGDEL 658
MD+DDFR+IL ++GVD+W FI+TA+ VASLD+G EL
Sbjct: 1 MDIDDFRSILESSGVDVWNFIDTAIDVASLDFGSEL 36
>ref|XP_002530078.1| conserved hypothetical protein [Ricinus communis]
gi|223530431|gb|EEF32318.1| conserved hypothetical
protein [Ricinus communis]
Length = 362
Score = 56.6 bits (135), Expect = 6e-06
Identities = 24/36 (66%), Positives = 33/36 (91%)
Frame = +2
Query: 551 MDLDDFRTILGNTGVDIWGFIETAVKVASLDYGDEL 658
MD+DDFR+IL ++GVD+W FI+TA+ VASLD+G+EL
Sbjct: 1 MDVDDFRSILESSGVDVWTFIDTAIVVASLDFGNEL 36
>gb|EXB36907.1| hypothetical protein L484_016512 [Morus notabilis]
Length = 418
Score = 56.2 bits (134), Expect = 8e-06
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = +2
Query: 551 MDLDDFRTILGNTGVDIWGFIETAVKVASLDYGDEL 658
MD DDFR IL ++GVD+W FI+TA+ VAS+DYG EL
Sbjct: 1 MDYDDFRAILDSSGVDVWTFIDTAIAVASMDYGGEL 36
>gb|EOY19920.1| Transcription elongation factor (TFIIS) family protein, putative
isoform 2, partial [Theobroma cacao]
Length = 300
Score = 56.2 bits (134), Expect = 8e-06
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = +2
Query: 551 MDLDDFRTILGNTGVDIWGFIETAVKVASLDYGDEL 658
MDLDDFR++L GVD+W FI++A+ VASLDYG EL
Sbjct: 1 MDLDDFRSVLETAGVDVWTFIDSAILVASLDYGQEL 36
>gb|EOY19919.1| Transcription elongation factor (TFIIS) family protein, putative
isoform 1 [Theobroma cacao]
Length = 337
Score = 56.2 bits (134), Expect = 8e-06
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = +2
Query: 551 MDLDDFRTILGNTGVDIWGFIETAVKVASLDYGDEL 658
MDLDDFR++L GVD+W FI++A+ VASLDYG EL
Sbjct: 1 MDLDDFRSVLETAGVDVWTFIDSAILVASLDYGQEL 36