BLASTX nr result
ID: Achyranthes23_contig00013509
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00013509
(2395 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su... 1439 0.0
ref|XP_004972809.1| PREDICTED: DNA-directed RNA polymerase II su... 1425 0.0
ref|XP_006828844.1| hypothetical protein AMTR_s00001p00152770 [A... 1425 0.0
gb|EMT20712.1| DNA-directed RNA polymerase II subunit RPB1 [Aegi... 1424 0.0
gb|EMS50869.1| DNA-directed RNA polymerase II subunit RPB1 [Trit... 1424 0.0
dbj|BAK02300.1| predicted protein [Hordeum vulgare subsp. vulgare] 1424 0.0
ref|XP_004972810.1| PREDICTED: DNA-directed RNA polymerase II su... 1423 0.0
ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II su... 1418 0.0
ref|XP_003573479.1| PREDICTED: DNA-directed RNA polymerase II su... 1417 0.0
gb|EXC35292.1| DNA-directed RNA polymerase II subunit rpb1 [Moru... 1412 0.0
gb|EEC82922.1| hypothetical protein OsI_27866 [Oryza sativa Indi... 1412 0.0
ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II su... 1412 0.0
gb|AFW57310.1| RNA polymerase II large subunit family protein [Z... 1409 0.0
gb|EMJ04257.1| hypothetical protein PRUPE_ppa000093mg [Prunus pe... 1408 0.0
ref|XP_002443877.1| hypothetical protein SORBIDRAFT_07g003680 [S... 1407 0.0
ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II su... 1404 0.0
ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 1404 0.0
ref|XP_002530639.1| DNA-directed RNA polymerase II largest subun... 1396 0.0
gb|ESW29856.1| hypothetical protein PHAVU_002G104500g [Phaseolus... 1393 0.0
ref|XP_006590737.1| PREDICTED: DNA-directed RNA polymerase II su... 1392 0.0
>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Vitis
vinifera]
Length = 1848
Score = 1439 bits (3725), Expect = 0.0
Identities = 711/798 (89%), Positives = 757/798 (94%)
Frame = -1
Query: 2395 KQVFNLIIPKQINLVRFSAWHQETETGFLTPGDTRVLVERGELLSGTLCKKTLGSSSGSL 2216
KQVFNLIIPKQINL+R SAWH E+ETGF+TPGDT+V +E+GELL+GTLCKKTLG+S+GSL
Sbjct: 588 KQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSL 647
Query: 2215 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMETINETISKAKNE 2036
IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATME INETISKAKNE
Sbjct: 648 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNE 707
Query: 2035 VKNLIRAAQEKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQRSLSESNNLKAMVTA 1856
VK LIRAAQE+QLE EPGRTMMESFENRVNQVLNKARDDAGSSAQ+SLSESNNLKAMVTA
Sbjct: 708 VKELIRAAQERQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTA 767
Query: 1855 GSKGSFINISQMTACVGQQNVEGKRIPFGFVGRTLPHFTKDDYGPESRGFVENSYLRGLT 1676
GSKGSFINISQMTACVGQQNVEGKRIP+GF+ RTLPHFTKDDYGPESRGFVENSYLRGLT
Sbjct: 768 GSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLT 827
Query: 1675 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 1496
PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG
Sbjct: 828 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 887
Query: 1495 EDGMDSVWIESQKLDSLKMKKSEFDTTYRYEFDADNWEPDYMLKEHVDDLKTIREFRNVF 1316
EDGMD+VWIE+QKLDSLKMKK EFD ++YE D +NW P YML EHV+DLKTIREFRNVF
Sbjct: 888 EDGMDAVWIETQKLDSLKMKKGEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIREFRNVF 947
Query: 1315 DAEVQKLEVDRCQLATDIATTGDNSWPLPVNLKRLLWNAQKTFKVDMREKSDMHPMEIVE 1136
DAEVQKLE DR QL T+IATTGDNSWP+PVNLKRL+WNAQKTFKVD+R SDMHPMEIVE
Sbjct: 948 DAEVQKLEADRFQLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVE 1007
Query: 1135 AVDKLQERLKVVPGEDFLSKEAQKNATLFFNILLRSTLASKRVLKEFKLNREAFEWVIGE 956
AVDKLQERLKVVPG+D +S EAQKNATLFFNILLRST ASKRVLKE++L REAFEWVIGE
Sbjct: 1008 AVDKLQERLKVVPGDDLISMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGE 1067
Query: 955 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 776
IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA
Sbjct: 1068 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 1127
Query: 775 KKIKTPSLSVFLNPEISKTKERAKNVQCILEYTCLRSVTHATEVWYDPDPMSTIIEEDVD 596
KKIKTPSLSV+L P++SKTKERAKNVQC LEYT LRSVT ATEVWYDPDPMSTIIEEDVD
Sbjct: 1128 KKIKTPSLSVYLKPDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVD 1187
Query: 595 FVRSYYEMPDEEVSPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFSDDMTCIFTD 416
FV+SYYEMPDEEV+P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEF DD+TCIF D
Sbjct: 1188 FVKSYYEMPDEEVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFND 1247
Query: 415 DNAEKLILRIRIVNDEAQKGDFEADSAEDDVFLKKVAGSMLTEMALKGIPDINKVFIKQS 236
DNAEKLILRIRI+NDEA KG+ + +SAEDDVFLKK+ +MLTEMAL+GIPDINKVFIK
Sbjct: 1248 DNAEKLILRIRIMNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSG 1307
Query: 235 KVNKFDEEKGFKAETEWMLDTEGVNLLAVMCHEEVDATRTTSNHLIEVMEVLGIEAVRKA 56
KVNKFDE +GFK E EWMLDTEGVNLLAVMCHE+VDA RTTSNHLIEV+EVLGIEAVR++
Sbjct: 1308 KVNKFDESEGFKPEVEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRS 1367
Query: 55 LLDELRVVISFDGSYVNY 2
LLDELRVVISFDGSYVNY
Sbjct: 1368 LLDELRVVISFDGSYVNY 1385
>ref|XP_004972809.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like isoform
X1 [Setaria italica]
Length = 1852
Score = 1425 bits (3690), Expect = 0.0
Identities = 699/798 (87%), Positives = 750/798 (93%)
Frame = -1
Query: 2395 KQVFNLIIPKQINLVRFSAWHQETETGFLTPGDTRVLVERGELLSGTLCKKTLGSSSGSL 2216
KQVFNLIIPKQINL+RFSAWH ETETGF+TPGDT V +E+GELLSGTLCKK+LG+ SGSL
Sbjct: 588 KQVFNLIIPKQINLIRFSAWHSETETGFITPGDTMVRIEKGELLSGTLCKKSLGTGSGSL 647
Query: 2215 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMETINETISKAKNE 2036
IHVIWEEVGPDAARKFLGHTQWLVNYWLLQ GFSIGIGDTIADAATME INETISKAKNE
Sbjct: 648 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISKAKNE 707
Query: 2035 VKNLIRAAQEKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQRSLSESNNLKAMVTA 1856
VK LI+ AQ+K LE EPGRTMMESFENRVNQVLNKARDDAGSSAQ+SLSESNNLKAMVTA
Sbjct: 708 VKELIKQAQDKHLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTA 767
Query: 1855 GSKGSFINISQMTACVGQQNVEGKRIPFGFVGRTLPHFTKDDYGPESRGFVENSYLRGLT 1676
GSKGSFINISQMTACVGQQNVEGKRIPFGF+ RTLPHFTKDDYGPESRGFVENSYLRGLT
Sbjct: 768 GSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLT 827
Query: 1675 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 1496
PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG
Sbjct: 828 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 887
Query: 1495 EDGMDSVWIESQKLDSLKMKKSEFDTTYRYEFDADNWEPDYMLKEHVDDLKTIREFRNVF 1316
EDGMD+VWIESQKLDSLKMKK EFD +RYE D +NW P+YML EHVDDLKTIREFRNVF
Sbjct: 888 EDGMDAVWIESQKLDSLKMKKGEFDNVFRYELDDENWRPNYMLPEHVDDLKTIREFRNVF 947
Query: 1315 DAEVQKLEVDRCQLATDIATTGDNSWPLPVNLKRLLWNAQKTFKVDMREKSDMHPMEIVE 1136
+AEVQKLE DR QL T+I TTGDNSWP+PVNLKRL+WNAQKTFK+D R SDMHPMEIVE
Sbjct: 948 EAEVQKLEADRFQLGTEITTTGDNSWPMPVNLKRLIWNAQKTFKIDFRRPSDMHPMEIVE 1007
Query: 1135 AVDKLQERLKVVPGEDFLSKEAQKNATLFFNILLRSTLASKRVLKEFKLNREAFEWVIGE 956
A+DKLQERLKVVPG+D +S EAQKNATLFFNILLRST ASKRVLKE++L +EAFEWVIGE
Sbjct: 1008 AIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGE 1067
Query: 955 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 776
IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA
Sbjct: 1068 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 1127
Query: 775 KKIKTPSLSVFLNPEISKTKERAKNVQCILEYTCLRSVTHATEVWYDPDPMSTIIEEDVD 596
KKIKTPSLSV+L PE++K KE AKNVQC LEYT LRSVTHATE+WYDPDP+ TIIEEDV+
Sbjct: 1128 KKIKTPSLSVYLKPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDVE 1187
Query: 595 FVRSYYEMPDEEVSPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFSDDMTCIFTD 416
FVRSYYEMPDE++ PDKISPWLLRIELNREMM+DKKLSMADIAEKIN EF DD++CIF D
Sbjct: 1188 FVRSYYEMPDEDIDPDKISPWLLRIELNREMMIDKKLSMADIAEKINREFDDDLSCIFND 1247
Query: 415 DNAEKLILRIRIVNDEAQKGDFEADSAEDDVFLKKVAGSMLTEMALKGIPDINKVFIKQS 236
DNA+KLILRIRI ND+A KG+ + +SAEDDVFLKK+ G+MLTEMAL+GIPDINKVFIK
Sbjct: 1248 DNADKLILRIRITNDDAPKGEIQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKHG 1307
Query: 235 KVNKFDEEKGFKAETEWMLDTEGVNLLAVMCHEEVDATRTTSNHLIEVMEVLGIEAVRKA 56
KVNKFD+ +GFKA+ EWMLDTEGVNLLAVMCHE+VDATRTTSNHLIEV+EVLGIEAVR++
Sbjct: 1308 KVNKFDQSEGFKADNEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRS 1367
Query: 55 LLDELRVVISFDGSYVNY 2
LLDELRVVISFDGSYVNY
Sbjct: 1368 LLDELRVVISFDGSYVNY 1385
>ref|XP_006828844.1| hypothetical protein AMTR_s00001p00152770 [Amborella trichopoda]
gi|548833823|gb|ERM96260.1| hypothetical protein
AMTR_s00001p00152770 [Amborella trichopoda]
Length = 1844
Score = 1425 bits (3689), Expect = 0.0
Identities = 706/798 (88%), Positives = 753/798 (94%)
Frame = -1
Query: 2395 KQVFNLIIPKQINLVRFSAWHQETETGFLTPGDTRVLVERGELLSGTLCKKTLGSSSGSL 2216
KQVFNLIIPKQINL+R+SAWH E+E+GF+TPGDT V +ERGELLSGTLCKKTLG+SSGSL
Sbjct: 591 KQVFNLIIPKQINLIRYSAWHSESESGFITPGDTCVRIERGELLSGTLCKKTLGTSSGSL 650
Query: 2215 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMETINETISKAKNE 2036
IHVIWEEVGPDAARKFLGHTQWLVNYWLLQ FSIGIGDTIADAATME INETISKAKNE
Sbjct: 651 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQQAFSIGIGDTIADAATMEKINETISKAKNE 710
Query: 2035 VKNLIRAAQEKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQRSLSESNNLKAMVTA 1856
VK LI+AAQEKQLE EPGRTMMESFENRVNQVLNKARDDAGSSAQ+SLSESNNLKAMVTA
Sbjct: 711 VKELIKAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTA 770
Query: 1855 GSKGSFINISQMTACVGQQNVEGKRIPFGFVGRTLPHFTKDDYGPESRGFVENSYLRGLT 1676
GSKGSFINISQMTACVGQQNVEGKRIPFGF RTLPHFTKDDYGPESRGFVENSYLRGLT
Sbjct: 771 GSKGSFINISQMTACVGQQNVEGKRIPFGFNDRTLPHFTKDDYGPESRGFVENSYLRGLT 830
Query: 1675 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 1496
PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG
Sbjct: 831 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 890
Query: 1495 EDGMDSVWIESQKLDSLKMKKSEFDTTYRYEFDADNWEPDYMLKEHVDDLKTIREFRNVF 1316
EDGMD+VWIESQKLDSLKMK++EF+ Y+YE D +NW P YML EHV+DLKTIREF+NVF
Sbjct: 891 EDGMDAVWIESQKLDSLKMKRAEFENVYKYEIDQENWSPSYMLPEHVEDLKTIREFQNVF 950
Query: 1315 DAEVQKLEVDRCQLATDIATTGDNSWPLPVNLKRLLWNAQKTFKVDMREKSDMHPMEIVE 1136
DAEVQKLE DR QL T+I TTGDNSWP+PVNLKRL+WNAQK FKVD+R SDMHPMEIVE
Sbjct: 951 DAEVQKLEADRHQLGTEITTTGDNSWPMPVNLKRLIWNAQKMFKVDLRRPSDMHPMEIVE 1010
Query: 1135 AVDKLQERLKVVPGEDFLSKEAQKNATLFFNILLRSTLASKRVLKEFKLNREAFEWVIGE 956
AVDKLQERLKVVPG+D +S EAQKNATLFFNILLRST ASKRVLKE++L REAF+WVIGE
Sbjct: 1011 AVDKLQERLKVVPGDDLMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGE 1070
Query: 955 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 776
IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA
Sbjct: 1071 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 1130
Query: 775 KKIKTPSLSVFLNPEISKTKERAKNVQCILEYTCLRSVTHATEVWYDPDPMSTIIEEDVD 596
KKIKTPSLSV+L E++KTKE+AKNVQC LEYT LRSVT ATEVWYDPDPMSTIIEEDVD
Sbjct: 1131 KKIKTPSLSVYLKHEVNKTKEKAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVD 1190
Query: 595 FVRSYYEMPDEEVSPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFSDDMTCIFTD 416
FVRSYYEMPDEEV+P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEF DD+TCIF D
Sbjct: 1191 FVRSYYEMPDEEVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFND 1250
Query: 415 DNAEKLILRIRIVNDEAQKGDFEADSAEDDVFLKKVAGSMLTEMALKGIPDINKVFIKQS 236
DNAEKLILRIRI+NDEA KG+ + +S+EDDVFLKK+ +MLTEMAL+GIPDINKVFIK
Sbjct: 1251 DNAEKLILRIRIMNDEAPKGELQDESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSG 1310
Query: 235 KVNKFDEEKGFKAETEWMLDTEGVNLLAVMCHEEVDATRTTSNHLIEVMEVLGIEAVRKA 56
K+NKFDE +GFK E EWMLDTEGVNLLAVMC+EEVDATRTTSNHLIEV++VLGIEAVR+A
Sbjct: 1311 KINKFDENEGFKPEIEWMLDTEGVNLLAVMCNEEVDATRTTSNHLIEVIQVLGIEAVRRA 1370
Query: 55 LLDELRVVISFDGSYVNY 2
LLDELRVVISFDGSYVNY
Sbjct: 1371 LLDELRVVISFDGSYVNY 1388
>gb|EMT20712.1| DNA-directed RNA polymerase II subunit RPB1 [Aegilops tauschii]
Length = 1861
Score = 1424 bits (3686), Expect = 0.0
Identities = 699/798 (87%), Positives = 750/798 (93%)
Frame = -1
Query: 2395 KQVFNLIIPKQINLVRFSAWHQETETGFLTPGDTRVLVERGELLSGTLCKKTLGSSSGSL 2216
KQVFNLIIPK INL+RFSAWH ETE+GF+TPGDT V +E+GELLSGTLCKKTLG+S+GSL
Sbjct: 588 KQVFNLIIPKLINLIRFSAWHAETESGFITPGDTMVRIEKGELLSGTLCKKTLGTSTGSL 647
Query: 2215 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMETINETISKAKNE 2036
IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATME INETI AKNE
Sbjct: 648 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETIGTAKNE 707
Query: 2035 VKNLIRAAQEKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQRSLSESNNLKAMVTA 1856
VK LI+ AQEK LEPEPGRTMMESFENRVNQVLNKARDDAGSSAQ+SLSESNNLKAMVTA
Sbjct: 708 VKELIKQAQEKNLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTA 767
Query: 1855 GSKGSFINISQMTACVGQQNVEGKRIPFGFVGRTLPHFTKDDYGPESRGFVENSYLRGLT 1676
GSKGSFINISQMTACVGQQNVEGKRIPFGFV RTLPHFTKDDYGPESRGFVENSYLRGLT
Sbjct: 768 GSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLT 827
Query: 1675 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 1496
PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG
Sbjct: 828 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 887
Query: 1495 EDGMDSVWIESQKLDSLKMKKSEFDTTYRYEFDADNWEPDYMLKEHVDDLKTIREFRNVF 1316
EDGMD+VWIESQKLDSLKMKK+EFD +RYE D +NW P YML +HVDDLKTIREFRNVF
Sbjct: 888 EDGMDAVWIESQKLDSLKMKKAEFDNVFRYELDDENWRPTYMLPDHVDDLKTIREFRNVF 947
Query: 1315 DAEVQKLEVDRCQLATDIATTGDNSWPLPVNLKRLLWNAQKTFKVDMREKSDMHPMEIVE 1136
+AEVQKLE DR QL T+I TTGDN+WP+PVNLKRL+WNAQKTFK+D+R SDMHPMEIVE
Sbjct: 948 EAEVQKLEADRLQLGTEITTTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVE 1007
Query: 1135 AVDKLQERLKVVPGEDFLSKEAQKNATLFFNILLRSTLASKRVLKEFKLNREAFEWVIGE 956
A+DKLQERLKVVPG+D +S EAQKNATLFFNILLRST ASKRVLKE++L +E+FEWVIGE
Sbjct: 1008 AIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKESFEWVIGE 1067
Query: 955 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 776
IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA
Sbjct: 1068 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 1127
Query: 775 KKIKTPSLSVFLNPEISKTKERAKNVQCILEYTCLRSVTHATEVWYDPDPMSTIIEEDVD 596
KKIKTPSLSVFL PE+SK KE AKNVQC LEYT LRSVTHATE+WYDPDP+ TIIEEDV+
Sbjct: 1128 KKIKTPSLSVFLKPEVSKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDVE 1187
Query: 595 FVRSYYEMPDEEVSPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFSDDMTCIFTD 416
FVRSYYEMPDE++ PDKISPWLLRIELNREMMVDKKLSMADIAEKIN EF DD++CIF D
Sbjct: 1188 FVRSYYEMPDEDIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLSCIFND 1247
Query: 415 DNAEKLILRIRIVNDEAQKGDFEADSAEDDVFLKKVAGSMLTEMALKGIPDINKVFIKQS 236
DNA+KLILR+RI NDEA KG+ + +SAEDDVFLKK+ G+MLTEMAL+GIPDINKVFIK
Sbjct: 1248 DNADKLILRVRITNDEAPKGEIQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKYG 1307
Query: 235 KVNKFDEEKGFKAETEWMLDTEGVNLLAVMCHEEVDATRTTSNHLIEVMEVLGIEAVRKA 56
KVNKFDE +GFK + EWMLDTEGVNLLAVMCHE+VD+TRTTSNHLIEV+EVLGIEAVR++
Sbjct: 1308 KVNKFDESEGFKPDNEWMLDTEGVNLLAVMCHEDVDSTRTTSNHLIEVIEVLGIEAVRRS 1367
Query: 55 LLDELRVVISFDGSYVNY 2
LLDELRVVISFDGSYVNY
Sbjct: 1368 LLDELRVVISFDGSYVNY 1385
>gb|EMS50869.1| DNA-directed RNA polymerase II subunit RPB1 [Triticum urartu]
Length = 2040
Score = 1424 bits (3686), Expect = 0.0
Identities = 699/798 (87%), Positives = 750/798 (93%)
Frame = -1
Query: 2395 KQVFNLIIPKQINLVRFSAWHQETETGFLTPGDTRVLVERGELLSGTLCKKTLGSSSGSL 2216
KQVFNLIIPK INL+RFSAWH ETE+GF+TPGDT V +E+GELLSGTLCKKTLG+S+GSL
Sbjct: 588 KQVFNLIIPKLINLIRFSAWHAETESGFITPGDTMVRIEKGELLSGTLCKKTLGTSTGSL 647
Query: 2215 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMETINETISKAKNE 2036
IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATME INETI AKNE
Sbjct: 648 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETIGTAKNE 707
Query: 2035 VKNLIRAAQEKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQRSLSESNNLKAMVTA 1856
VK LI+ AQEK LEPEPGRTMMESFENRVNQVLNKARDDAGSSAQ+SLSESNNLKAMVTA
Sbjct: 708 VKELIKQAQEKNLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTA 767
Query: 1855 GSKGSFINISQMTACVGQQNVEGKRIPFGFVGRTLPHFTKDDYGPESRGFVENSYLRGLT 1676
GSKGSFINISQMTACVGQQNVEGKRIPFGFV RTLPHFTKDDYGPESRGFVENSYLRGLT
Sbjct: 768 GSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLT 827
Query: 1675 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 1496
PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG
Sbjct: 828 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 887
Query: 1495 EDGMDSVWIESQKLDSLKMKKSEFDTTYRYEFDADNWEPDYMLKEHVDDLKTIREFRNVF 1316
EDGMD+VWIESQKLDSLKMKK+EFD +RYE D +NW P YML +HVDDLKTIREFRNVF
Sbjct: 888 EDGMDAVWIESQKLDSLKMKKAEFDNVFRYELDDENWRPTYMLPDHVDDLKTIREFRNVF 947
Query: 1315 DAEVQKLEVDRCQLATDIATTGDNSWPLPVNLKRLLWNAQKTFKVDMREKSDMHPMEIVE 1136
+AEVQKLE DR QL T+I TTGDN+WP+PVNLKRL+WNAQKTFK+D+R SDMHPMEIVE
Sbjct: 948 EAEVQKLEADRLQLGTEITTTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVE 1007
Query: 1135 AVDKLQERLKVVPGEDFLSKEAQKNATLFFNILLRSTLASKRVLKEFKLNREAFEWVIGE 956
A+DKLQERLKVVPG+D +S EAQKNATLFFNILLRST ASKRVLKE++L +E+FEWVIGE
Sbjct: 1008 AIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKESFEWVIGE 1067
Query: 955 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 776
IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA
Sbjct: 1068 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 1127
Query: 775 KKIKTPSLSVFLNPEISKTKERAKNVQCILEYTCLRSVTHATEVWYDPDPMSTIIEEDVD 596
KKIKTPSLSVFL PE+SK KE AKNVQC LEYT LRSVTHATE+WYDPDP+ TIIEEDV+
Sbjct: 1128 KKIKTPSLSVFLKPEVSKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDVE 1187
Query: 595 FVRSYYEMPDEEVSPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFSDDMTCIFTD 416
FVRSYYEMPDE++ PDKISPWLLRIELNREMMVDKKLSMADIAEKIN EF DD++CIF D
Sbjct: 1188 FVRSYYEMPDEDIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLSCIFND 1247
Query: 415 DNAEKLILRIRIVNDEAQKGDFEADSAEDDVFLKKVAGSMLTEMALKGIPDINKVFIKQS 236
DNA+KLILR+RI NDEA KG+ + +SAEDDVFLKK+ G+MLTEMAL+GIPDINKVFIK
Sbjct: 1248 DNADKLILRVRITNDEAPKGEIQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKYG 1307
Query: 235 KVNKFDEEKGFKAETEWMLDTEGVNLLAVMCHEEVDATRTTSNHLIEVMEVLGIEAVRKA 56
KVNKFDE +GFK + EWMLDTEGVNLLAVMCHE+VD+TRTTSNHLIEV+EVLGIEAVR++
Sbjct: 1308 KVNKFDESEGFKPDNEWMLDTEGVNLLAVMCHEDVDSTRTTSNHLIEVIEVLGIEAVRRS 1367
Query: 55 LLDELRVVISFDGSYVNY 2
LLDELRVVISFDGSYVNY
Sbjct: 1368 LLDELRVVISFDGSYVNY 1385
>dbj|BAK02300.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1859
Score = 1424 bits (3686), Expect = 0.0
Identities = 699/798 (87%), Positives = 750/798 (93%)
Frame = -1
Query: 2395 KQVFNLIIPKQINLVRFSAWHQETETGFLTPGDTRVLVERGELLSGTLCKKTLGSSSGSL 2216
KQVFNLIIPK INL+RFSAWH ETE+GF+TPGDT V +E+GELLSGTLCKKTLG+S+GSL
Sbjct: 588 KQVFNLIIPKLINLIRFSAWHAETESGFITPGDTMVRIEKGELLSGTLCKKTLGTSTGSL 647
Query: 2215 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMETINETISKAKNE 2036
IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATME INETI AKNE
Sbjct: 648 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETIGTAKNE 707
Query: 2035 VKNLIRAAQEKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQRSLSESNNLKAMVTA 1856
VK LI+ AQEK LEPEPGRTMMESFENRVNQVLNKARDDAGSSAQ+SLSESNNLKAMVTA
Sbjct: 708 VKELIKQAQEKNLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTA 767
Query: 1855 GSKGSFINISQMTACVGQQNVEGKRIPFGFVGRTLPHFTKDDYGPESRGFVENSYLRGLT 1676
GSKGSFINISQMTACVGQQNVEGKRIPFGFV RTLPHFTKDDYGPESRGFVENSYLRGLT
Sbjct: 768 GSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLT 827
Query: 1675 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 1496
PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG
Sbjct: 828 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 887
Query: 1495 EDGMDSVWIESQKLDSLKMKKSEFDTTYRYEFDADNWEPDYMLKEHVDDLKTIREFRNVF 1316
EDGMD+VWIESQKLDSLKMKK+EFD +RYE D +NW P YML +HVDDLKTIREFRNVF
Sbjct: 888 EDGMDAVWIESQKLDSLKMKKAEFDNVFRYELDDENWRPTYMLPDHVDDLKTIREFRNVF 947
Query: 1315 DAEVQKLEVDRCQLATDIATTGDNSWPLPVNLKRLLWNAQKTFKVDMREKSDMHPMEIVE 1136
+AEVQKLE DR QL T+I TTGDN+WP+PVNLKRL+WNAQKTFK+D+R SDMHPMEIVE
Sbjct: 948 EAEVQKLEADRLQLGTEITTTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVE 1007
Query: 1135 AVDKLQERLKVVPGEDFLSKEAQKNATLFFNILLRSTLASKRVLKEFKLNREAFEWVIGE 956
A+DKLQERLKVVPG+D +S EAQKNATLFFNILLRST ASKRVLKE++L +E+FEWVIGE
Sbjct: 1008 AIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKESFEWVIGE 1067
Query: 955 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 776
IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA
Sbjct: 1068 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 1127
Query: 775 KKIKTPSLSVFLNPEISKTKERAKNVQCILEYTCLRSVTHATEVWYDPDPMSTIIEEDVD 596
KKIKTPSLSVFL PE+SK KE AKNVQC LEYT LRSVTHATE+WYDPDP+ TIIEEDV+
Sbjct: 1128 KKIKTPSLSVFLKPEVSKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDVE 1187
Query: 595 FVRSYYEMPDEEVSPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFSDDMTCIFTD 416
FVRSYYEMPDE++ PDKISPWLLRIELNREMMVDKKLSMADIAEKIN EF DD++CIF D
Sbjct: 1188 FVRSYYEMPDEDIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLSCIFND 1247
Query: 415 DNAEKLILRIRIVNDEAQKGDFEADSAEDDVFLKKVAGSMLTEMALKGIPDINKVFIKQS 236
DNA+KLILR+RI NDEA KG+ + +SAEDDVFLKK+ G+MLTEMAL+GIPDINKVFIK
Sbjct: 1248 DNADKLILRVRITNDEAPKGEIQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKYG 1307
Query: 235 KVNKFDEEKGFKAETEWMLDTEGVNLLAVMCHEEVDATRTTSNHLIEVMEVLGIEAVRKA 56
KVNKFDE +GFK + EWMLDTEGVNLLAVMCHE+VD+TRTTSNHLIEV+EVLGIEAVR++
Sbjct: 1308 KVNKFDESEGFKPDNEWMLDTEGVNLLAVMCHEDVDSTRTTSNHLIEVIEVLGIEAVRRS 1367
Query: 55 LLDELRVVISFDGSYVNY 2
LLDELRVVISFDGSYVNY
Sbjct: 1368 LLDELRVVISFDGSYVNY 1385
>ref|XP_004972810.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like isoform
X2 [Setaria italica]
Length = 1852
Score = 1423 bits (3683), Expect = 0.0
Identities = 698/798 (87%), Positives = 748/798 (93%)
Frame = -1
Query: 2395 KQVFNLIIPKQINLVRFSAWHQETETGFLTPGDTRVLVERGELLSGTLCKKTLGSSSGSL 2216
KQVFNLIIPKQINL+RFSAWH ETETGF+TPGDT V +E+GELLSGTLCKK+LG+ SGSL
Sbjct: 588 KQVFNLIIPKQINLIRFSAWHSETETGFITPGDTMVRIEKGELLSGTLCKKSLGTGSGSL 647
Query: 2215 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMETINETISKAKNE 2036
IHVIWEEVGPDAARKFLGHTQWLVNYWLLQ GFSIGIGDTIADAATME INETISKAKNE
Sbjct: 648 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISKAKNE 707
Query: 2035 VKNLIRAAQEKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQRSLSESNNLKAMVTA 1856
VK LI+ A E LE EPGRTMMESFENRVNQVLNKARDDAGSSAQ+SLSESNNLKAMVTA
Sbjct: 708 VKELIKQAHENHLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTA 767
Query: 1855 GSKGSFINISQMTACVGQQNVEGKRIPFGFVGRTLPHFTKDDYGPESRGFVENSYLRGLT 1676
GSKGSFINISQMTACVGQQNVEGKRIPFGF+ RTLPHFTKDDYGPESRGFVENSYLRGLT
Sbjct: 768 GSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLT 827
Query: 1675 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 1496
PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG
Sbjct: 828 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 887
Query: 1495 EDGMDSVWIESQKLDSLKMKKSEFDTTYRYEFDADNWEPDYMLKEHVDDLKTIREFRNVF 1316
EDGMD+VWIESQKLDSLKMKK EFD +RYE D +NW P+YML EHVDDLKTIREFRNVF
Sbjct: 888 EDGMDAVWIESQKLDSLKMKKGEFDNVFRYELDDENWRPNYMLPEHVDDLKTIREFRNVF 947
Query: 1315 DAEVQKLEVDRCQLATDIATTGDNSWPLPVNLKRLLWNAQKTFKVDMREKSDMHPMEIVE 1136
+AEVQKLE DR QL T+I TTGDNSWP+PVNLKRL+WNAQKTFK+D R SDMHPMEIVE
Sbjct: 948 EAEVQKLEADRFQLGTEITTTGDNSWPMPVNLKRLIWNAQKTFKIDFRRPSDMHPMEIVE 1007
Query: 1135 AVDKLQERLKVVPGEDFLSKEAQKNATLFFNILLRSTLASKRVLKEFKLNREAFEWVIGE 956
A+DKLQERLKVVPG+D +S EAQKNATLFFNILLRST ASKRVLKE++L +EAFEWVIGE
Sbjct: 1008 AIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGE 1067
Query: 955 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 776
IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA
Sbjct: 1068 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 1127
Query: 775 KKIKTPSLSVFLNPEISKTKERAKNVQCILEYTCLRSVTHATEVWYDPDPMSTIIEEDVD 596
KKIKTPSLSV+L PE++K KE AKNVQC LEYT LRSVTHATE+WYDPDP+ TIIEEDV+
Sbjct: 1128 KKIKTPSLSVYLKPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDVE 1187
Query: 595 FVRSYYEMPDEEVSPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFSDDMTCIFTD 416
FVRSYYEMPDE++ PDKISPWLLRIELNREMM+DKKLSMADIAEKIN EF DD++CIF D
Sbjct: 1188 FVRSYYEMPDEDIDPDKISPWLLRIELNREMMIDKKLSMADIAEKINREFDDDLSCIFND 1247
Query: 415 DNAEKLILRIRIVNDEAQKGDFEADSAEDDVFLKKVAGSMLTEMALKGIPDINKVFIKQS 236
DNA+KLILRIRI ND+A KG+ + +SAEDDVFLKK+ G+MLTEMAL+GIPDINKVFIK
Sbjct: 1248 DNADKLILRIRITNDDAPKGEIQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKHG 1307
Query: 235 KVNKFDEEKGFKAETEWMLDTEGVNLLAVMCHEEVDATRTTSNHLIEVMEVLGIEAVRKA 56
KVNKFD+ +GFKA+ EWMLDTEGVNLLAVMCHE+VDATRTTSNHLIEV+EVLGIEAVR++
Sbjct: 1308 KVNKFDQSEGFKADNEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRS 1367
Query: 55 LLDELRVVISFDGSYVNY 2
LLDELRVVISFDGSYVNY
Sbjct: 1368 LLDELRVVISFDGSYVNY 1385
>ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Oryza
brachyantha]
Length = 1855
Score = 1418 bits (3671), Expect = 0.0
Identities = 697/798 (87%), Positives = 748/798 (93%)
Frame = -1
Query: 2395 KQVFNLIIPKQINLVRFSAWHQETETGFLTPGDTRVLVERGELLSGTLCKKTLGSSSGSL 2216
KQVFNLIIPK INL+RFSAWH E ETGF+TPGDT V +E+GELLSGTLCKKTLG+S+GSL
Sbjct: 588 KQVFNLIIPKPINLIRFSAWHSEAETGFITPGDTMVRIEKGELLSGTLCKKTLGTSTGSL 647
Query: 2215 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMETINETISKAKNE 2036
IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATME INETIS AKNE
Sbjct: 648 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISTAKNE 707
Query: 2035 VKNLIRAAQEKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQRSLSESNNLKAMVTA 1856
VK LI+ A +K LE EPGRTMMESFENRVNQVLNKARDDAGSSAQ+SLSESNNLKAMVTA
Sbjct: 708 VKELIKQAHDKHLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTA 767
Query: 1855 GSKGSFINISQMTACVGQQNVEGKRIPFGFVGRTLPHFTKDDYGPESRGFVENSYLRGLT 1676
GSKGSFINISQMTACVGQQNVEGKRIPFGF+ RTLPHFTKDDYGPESRGFVENSYLRGLT
Sbjct: 768 GSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLT 827
Query: 1675 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 1496
PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG
Sbjct: 828 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 887
Query: 1495 EDGMDSVWIESQKLDSLKMKKSEFDTTYRYEFDADNWEPDYMLKEHVDDLKTIREFRNVF 1316
EDGMD+VWIESQKLDSLKMKK EFDT +RYE D +NW P+YML EHV+DLKTIREFRNVF
Sbjct: 888 EDGMDAVWIESQKLDSLKMKKGEFDTVFRYELDDENWRPNYMLPEHVEDLKTIREFRNVF 947
Query: 1315 DAEVQKLEVDRCQLATDIATTGDNSWPLPVNLKRLLWNAQKTFKVDMREKSDMHPMEIVE 1136
+AEVQKLE DR QL T+IATTGDN+WP+PVNLKRL+WNAQKTFK+D+R SDMHPMEIVE
Sbjct: 948 EAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVE 1007
Query: 1135 AVDKLQERLKVVPGEDFLSKEAQKNATLFFNILLRSTLASKRVLKEFKLNREAFEWVIGE 956
A+DKLQERLKVVPG+D +S EAQKNATLFFNILLRST ASKRVLKE++L +EAFEWVIGE
Sbjct: 1008 AIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGE 1067
Query: 955 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 776
IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA
Sbjct: 1068 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 1127
Query: 775 KKIKTPSLSVFLNPEISKTKERAKNVQCILEYTCLRSVTHATEVWYDPDPMSTIIEEDVD 596
KKIKTPSLSV+L PE++K KE AKNVQC LEYT LRSVTHATE+WYDPDP+ TIIEEDV+
Sbjct: 1128 KKIKTPSLSVYLKPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDVE 1187
Query: 595 FVRSYYEMPDEEVSPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFSDDMTCIFTD 416
FVRSYYEMPDE+V PDKISPWLLRIELNREMMVDKKLSMADIAEKIN EF DD++CIF D
Sbjct: 1188 FVRSYYEMPDEDVDPDKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLSCIFND 1247
Query: 415 DNAEKLILRIRIVNDEAQKGDFEADSAEDDVFLKKVAGSMLTEMALKGIPDINKVFIKQS 236
DNA+KLILR+RI NDEA KG+ + +SAEDDVFLKK+ +MLTEMAL+GIPDINKVFIK
Sbjct: 1248 DNADKLILRVRITNDEAPKGEIQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKYG 1307
Query: 235 KVNKFDEEKGFKAETEWMLDTEGVNLLAVMCHEEVDATRTTSNHLIEVMEVLGIEAVRKA 56
KVNKF++ GFK + EWMLDTEGVNLLAVMCHE+VDATRTTSNHLIEV+EVLGIEAVR+A
Sbjct: 1308 KVNKFEDNDGFKPDNEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRA 1367
Query: 55 LLDELRVVISFDGSYVNY 2
LLDELRVVISFDGSYVNY
Sbjct: 1368 LLDELRVVISFDGSYVNY 1385
>ref|XP_003573479.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like
[Brachypodium distachyon]
Length = 1862
Score = 1417 bits (3669), Expect = 0.0
Identities = 695/798 (87%), Positives = 749/798 (93%)
Frame = -1
Query: 2395 KQVFNLIIPKQINLVRFSAWHQETETGFLTPGDTRVLVERGELLSGTLCKKTLGSSSGSL 2216
KQVFNLIIPK INL+RFSAWH E+E+GF+TPGDT V +E+GELLSGTLCKKTLG+ +GSL
Sbjct: 589 KQVFNLIIPKLINLIRFSAWHAESESGFITPGDTMVRIEKGELLSGTLCKKTLGTGTGSL 648
Query: 2215 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMETINETISKAKNE 2036
IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADA+TME INETISKAK+E
Sbjct: 649 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINETISKAKSE 708
Query: 2035 VKNLIRAAQEKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQRSLSESNNLKAMVTA 1856
V LI+ AQ+K LEPEPGRTMMESFENRVNQVLNKARDDAGSSAQ+SLSESNNLKAMVTA
Sbjct: 709 VTELIKQAQDKLLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTA 768
Query: 1855 GSKGSFINISQMTACVGQQNVEGKRIPFGFVGRTLPHFTKDDYGPESRGFVENSYLRGLT 1676
GSKGSFINISQMTACVGQQNVEGKRIPFGFV RTLPHFTK+DYGPESRGFVENSYLRGLT
Sbjct: 769 GSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHFTKNDYGPESRGFVENSYLRGLT 828
Query: 1675 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 1496
PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG
Sbjct: 829 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 888
Query: 1495 EDGMDSVWIESQKLDSLKMKKSEFDTTYRYEFDADNWEPDYMLKEHVDDLKTIREFRNVF 1316
EDGMD+VWIE+QKLDSLKMKK+EFD YRYE D +NW P YML EHVDDLKTIREFRNVF
Sbjct: 889 EDGMDAVWIETQKLDSLKMKKAEFDNVYRYELDDENWRPTYMLPEHVDDLKTIREFRNVF 948
Query: 1315 DAEVQKLEVDRCQLATDIATTGDNSWPLPVNLKRLLWNAQKTFKVDMREKSDMHPMEIVE 1136
+AEVQKLE DR QL T+I TTGDNSWP+PVNLKRL+WNAQKTFK+D+R SDMHPMEIVE
Sbjct: 949 EAEVQKLEADRLQLGTEITTTGDNSWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVE 1008
Query: 1135 AVDKLQERLKVVPGEDFLSKEAQKNATLFFNILLRSTLASKRVLKEFKLNREAFEWVIGE 956
A+DKLQERLKVVPG+D +S EAQKNATLFFNILLRST ASKRVLKE++L +E+FEWVIGE
Sbjct: 1009 AIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKESFEWVIGE 1068
Query: 955 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 776
IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA
Sbjct: 1069 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 1128
Query: 775 KKIKTPSLSVFLNPEISKTKERAKNVQCILEYTCLRSVTHATEVWYDPDPMSTIIEEDVD 596
KKIKTPSLSVFL PE+SK KE AKNVQC LEYT LRSVTHATE+WYDPDP+ TIIEED+D
Sbjct: 1129 KKIKTPSLSVFLKPEVSKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDMD 1188
Query: 595 FVRSYYEMPDEEVSPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFSDDMTCIFTD 416
FV+SYYEMPDE++ PDKISPWLLRIELNREMMVDKKLSMADIAEKIN EF DD++CIF D
Sbjct: 1189 FVKSYYEMPDEDIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLSCIFND 1248
Query: 415 DNAEKLILRIRIVNDEAQKGDFEADSAEDDVFLKKVAGSMLTEMALKGIPDINKVFIKQS 236
DNA+KLILR+RI NDEA KG+ + +SAEDDVFLKK+ G+MLTEMAL+GIPDINKVFIK
Sbjct: 1249 DNADKLILRVRITNDEAPKGEIQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKYG 1308
Query: 235 KVNKFDEEKGFKAETEWMLDTEGVNLLAVMCHEEVDATRTTSNHLIEVMEVLGIEAVRKA 56
K+NKFDE GFK + EWMLDTEGVNLLAVMCHE+VDATRTTSNHLIEV+EVLGIEAVR++
Sbjct: 1309 KINKFDENDGFKPDNEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRS 1368
Query: 55 LLDELRVVISFDGSYVNY 2
LLDELRVVISFDGSYVNY
Sbjct: 1369 LLDELRVVISFDGSYVNY 1386
>gb|EXC35292.1| DNA-directed RNA polymerase II subunit rpb1 [Morus notabilis]
Length = 1866
Score = 1412 bits (3656), Expect = 0.0
Identities = 702/798 (87%), Positives = 747/798 (93%)
Frame = -1
Query: 2395 KQVFNLIIPKQINLVRFSAWHQETETGFLTPGDTRVLVERGELLSGTLCKKTLGSSSGSL 2216
KQVFNLIIPKQINL R SAWH E+E+G++TPGDT V +E+GELLSGTLCKKTLG+SSGSL
Sbjct: 603 KQVFNLIIPKQINLNRTSAWHAESESGYITPGDTLVRIEKGELLSGTLCKKTLGTSSGSL 662
Query: 2215 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMETINETISKAKNE 2036
IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADA+TME INETIS+AKN+
Sbjct: 663 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINETISRAKND 722
Query: 2035 VKNLIRAAQEKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQRSLSESNNLKAMVTA 1856
VK LIR AQ K+LE EPGRTMMESFEN+VNQVLNKARDDAGSSAQ+SLSESNNLKAMVTA
Sbjct: 723 VKELIRKAQAKELEAEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTA 782
Query: 1855 GSKGSFINISQMTACVGQQNVEGKRIPFGFVGRTLPHFTKDDYGPESRGFVENSYLRGLT 1676
GSKGSFINISQMTACVGQQNVEGKRIP+GF+ RTLPHFTKDDYGPESRGFVENSYLRGLT
Sbjct: 783 GSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLT 842
Query: 1675 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 1496
PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG
Sbjct: 843 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 902
Query: 1495 EDGMDSVWIESQKLDSLKMKKSEFDTTYRYEFDADNWEPDYMLKEHVDDLKTIREFRNVF 1316
EDGMDSVWIESQKLDSLKMKK+EF+ +RYEFD + W P YML EHV+DLKTIREFRNVF
Sbjct: 903 EDGMDSVWIESQKLDSLKMKKTEFERVFRYEFDNETWNPTYMLPEHVEDLKTIREFRNVF 962
Query: 1315 DAEVQKLEVDRCQLATDIATTGDNSWPLPVNLKRLLWNAQKTFKVDMREKSDMHPMEIVE 1136
DAEVQKLE DR QL T+IATTGDNSWPLPVNLKRL+ NAQKTFK+D R SDMHPMEIVE
Sbjct: 963 DAEVQKLESDRLQLGTEIATTGDNSWPLPVNLKRLIQNAQKTFKIDFRRTSDMHPMEIVE 1022
Query: 1135 AVDKLQERLKVVPGEDFLSKEAQKNATLFFNILLRSTLASKRVLKEFKLNREAFEWVIGE 956
A+DKLQERLKVVPGED LS EAQKNATLFFNILLRST ASKRVL+E++L RE FEWVIGE
Sbjct: 1023 AIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLEEYRLTREGFEWVIGE 1082
Query: 955 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 776
IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA
Sbjct: 1083 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 1142
Query: 775 KKIKTPSLSVFLNPEISKTKERAKNVQCILEYTCLRSVTHATEVWYDPDPMSTIIEEDVD 596
K+IKTPSLSVFL PE SKTKERAK VQC LEYT LRSVT ATEVWYDPDPMSTII+EDVD
Sbjct: 1143 KRIKTPSLSVFLKPEASKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIDEDVD 1202
Query: 595 FVRSYYEMPDEEVSPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFSDDMTCIFTD 416
FVRSYYEMPDEE++PDKISPWLLRIELNREMMVDKKLSMADIAEKIN+EF DD+TCIF D
Sbjct: 1203 FVRSYYEMPDEEINPDKISPWLLRIELNREMMVDKKLSMADIAEKINVEFDDDLTCIFND 1262
Query: 415 DNAEKLILRIRIVNDEAQKGDFEADSAEDDVFLKKVAGSMLTEMALKGIPDINKVFIKQS 236
DNAEKLILRIRI+NDEA KGD ++AEDDVFLKK+ +MLTEM+L+GIPDINKVFIK
Sbjct: 1263 DNAEKLILRIRIMNDEAPKGDLTDEAAEDDVFLKKIESNMLTEMSLRGIPDINKVFIKHG 1322
Query: 235 KVNKFDEEKGFKAETEWMLDTEGVNLLAVMCHEEVDATRTTSNHLIEVMEVLGIEAVRKA 56
KVNKFDE GFK E EWMLDTEGVNLLAV+CHE+VDA RTTSNHLIEV+EVLGIEAVR++
Sbjct: 1323 KVNKFDENDGFKPENEWMLDTEGVNLLAVICHEDVDAKRTTSNHLIEVIEVLGIEAVRRS 1382
Query: 55 LLDELRVVISFDGSYVNY 2
LLDELRVVISFDGSYVNY
Sbjct: 1383 LLDELRVVISFDGSYVNY 1400
>gb|EEC82922.1| hypothetical protein OsI_27866 [Oryza sativa Indica Group]
Length = 1449
Score = 1412 bits (3656), Expect = 0.0
Identities = 694/798 (86%), Positives = 748/798 (93%)
Frame = -1
Query: 2395 KQVFNLIIPKQINLVRFSAWHQETETGFLTPGDTRVLVERGELLSGTLCKKTLGSSSGSL 2216
KQVFNLIIPK INL+RFSAWH E ETGF+TPGDT V +E+GELLSGTLCKKTLG+S+GSL
Sbjct: 558 KQVFNLIIPKPINLIRFSAWHSEAETGFITPGDTMVRIEKGELLSGTLCKKTLGTSTGSL 617
Query: 2215 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMETINETISKAKNE 2036
IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATM INETISKAK++
Sbjct: 618 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMVKINETISKAKDD 677
Query: 2035 VKNLIRAAQEKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQRSLSESNNLKAMVTA 1856
VK LI+ A +KQLE EPGRTMMESFENRVNQVLNKARDDAGSSAQ+SLSESNNLKAMVTA
Sbjct: 678 VKELIKQAHDKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTA 737
Query: 1855 GSKGSFINISQMTACVGQQNVEGKRIPFGFVGRTLPHFTKDDYGPESRGFVENSYLRGLT 1676
GSKGSFINISQMTACVGQQNVEGKRIPFGF+ RTLPHFTKDDYGPESRGFVENSYLRGLT
Sbjct: 738 GSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLT 797
Query: 1675 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 1496
PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG
Sbjct: 798 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 857
Query: 1495 EDGMDSVWIESQKLDSLKMKKSEFDTTYRYEFDADNWEPDYMLKEHVDDLKTIREFRNVF 1316
EDGMD+VWIESQKLDSLKMKK EFD +RYE D +NW P+YML EHVDDLKTIREFRNVF
Sbjct: 858 EDGMDAVWIESQKLDSLKMKKGEFDNVFRYELDDENWRPNYMLPEHVDDLKTIREFRNVF 917
Query: 1315 DAEVQKLEVDRCQLATDIATTGDNSWPLPVNLKRLLWNAQKTFKVDMREKSDMHPMEIVE 1136
+AEVQKLE DR QL ++IATTGDN+WP+PVNLKRL+WNAQKTFK+D+R SDMHPMEIVE
Sbjct: 918 EAEVQKLEADRFQLGSEIATTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVE 977
Query: 1135 AVDKLQERLKVVPGEDFLSKEAQKNATLFFNILLRSTLASKRVLKEFKLNREAFEWVIGE 956
A+DKLQERLKVVPG+D +S EAQKNATLFFNILLRST ASKRVLKE++L +EAFEWVIGE
Sbjct: 978 AIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGE 1037
Query: 955 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 776
IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA
Sbjct: 1038 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 1097
Query: 775 KKIKTPSLSVFLNPEISKTKERAKNVQCILEYTCLRSVTHATEVWYDPDPMSTIIEEDVD 596
KKIKTPSLSV+L PE++K KE AKNVQC LEYT LRSVTHATE+WYDPDP+ TIIEEDV+
Sbjct: 1098 KKIKTPSLSVYLKPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDVE 1157
Query: 595 FVRSYYEMPDEEVSPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFSDDMTCIFTD 416
FVRSYYEMPDE++ PDKISPWLLRIELNREMMVDKKLSMADIAEKIN EF DD++CIF D
Sbjct: 1158 FVRSYYEMPDEDIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLSCIFND 1217
Query: 415 DNAEKLILRIRIVNDEAQKGDFEADSAEDDVFLKKVAGSMLTEMALKGIPDINKVFIKQS 236
DNA+KLILR+RI NDEA KG+ + +SAEDDVFLKK+ +MLTEMAL+GIPDINKVFIK
Sbjct: 1218 DNADKLILRVRITNDEAPKGEIQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKYG 1277
Query: 235 KVNKFDEEKGFKAETEWMLDTEGVNLLAVMCHEEVDATRTTSNHLIEVMEVLGIEAVRKA 56
KVNKF++ GFKA+ EWML TEGVNLLAVMCHE+VDATRTTSNHLIEV+EVLGIEAVR+A
Sbjct: 1278 KVNKFEDNVGFKADNEWMLVTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRA 1337
Query: 55 LLDELRVVISFDGSYVNY 2
LLDELRVVISFDGSYVNY
Sbjct: 1338 LLDELRVVISFDGSYVNY 1355
>ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Fragaria
vesca subsp. vesca]
Length = 1842
Score = 1412 bits (3654), Expect = 0.0
Identities = 697/798 (87%), Positives = 745/798 (93%)
Frame = -1
Query: 2395 KQVFNLIIPKQINLVRFSAWHQETETGFLTPGDTRVLVERGELLSGTLCKKTLGSSSGSL 2216
KQVFNLIIPKQINL R SAWH E+ETG +TPGDT V +E+GELLSGTLCKK LG+S+GSL
Sbjct: 586 KQVFNLIIPKQINLQRTSAWHSESETGNITPGDTHVRIEKGELLSGTLCKKALGTSTGSL 645
Query: 2215 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMETINETISKAKNE 2036
IHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATME INETISKAKNE
Sbjct: 646 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNE 705
Query: 2035 VKNLIRAAQEKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQRSLSESNNLKAMVTA 1856
VK LI AQ K LEPEPGRTMM+SFEN+VNQVLN+ARDDAGSSAQ+SLSESNNLKAMVTA
Sbjct: 706 VKELISKAQSKSLEPEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTA 765
Query: 1855 GSKGSFINISQMTACVGQQNVEGKRIPFGFVGRTLPHFTKDDYGPESRGFVENSYLRGLT 1676
GSKGSFINISQMTACVGQQNVEGKRIP+GF+ RTLPHFTKDDYGPESRGFVENSYLRGLT
Sbjct: 766 GSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLT 825
Query: 1675 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 1496
PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG
Sbjct: 826 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 885
Query: 1495 EDGMDSVWIESQKLDSLKMKKSEFDTTYRYEFDADNWEPDYMLKEHVDDLKTIREFRNVF 1316
EDGMD+VWIESQKLDSLKMKK EFD T+ Y FD +NW PDYML EHV+DLKTIREFRNVF
Sbjct: 886 EDGMDAVWIESQKLDSLKMKKKEFDKTFAYVFDDENWNPDYMLPEHVEDLKTIREFRNVF 945
Query: 1315 DAEVQKLEVDRCQLATDIATTGDNSWPLPVNLKRLLWNAQKTFKVDMREKSDMHPMEIVE 1136
DAEV KLE DR QL T+IA TGDNSWPLPVNLKRL+WNAQKTFK+D R SDMHPMEIVE
Sbjct: 946 DAEVSKLETDRLQLGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVE 1005
Query: 1135 AVDKLQERLKVVPGEDFLSKEAQKNATLFFNILLRSTLASKRVLKEFKLNREAFEWVIGE 956
A+DKLQERL+VVPG+D LS EAQKNATLFFNILLRST ASKRVL+E++L REAFEWVIGE
Sbjct: 1006 AIDKLQERLRVVPGDDLLSVEAQKNATLFFNILLRSTFASKRVLEEYRLTREAFEWVIGE 1065
Query: 955 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 776
IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA
Sbjct: 1066 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 1125
Query: 775 KKIKTPSLSVFLNPEISKTKERAKNVQCILEYTCLRSVTHATEVWYDPDPMSTIIEEDVD 596
K+IKTPSLSV+L PE +KTKERAKNVQC LEYT LRSVT ATEVWYDPDPMST+IEED+D
Sbjct: 1126 KRIKTPSLSVYLKPEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDLD 1185
Query: 595 FVRSYYEMPDEEVSPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFSDDMTCIFTD 416
FVRSYYEMPDEEV+PDKISPWLLRIELNREMMVDKKLSMADIAEKINLEF D+TCIF D
Sbjct: 1186 FVRSYYEMPDEEVNPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDGDLTCIFND 1245
Query: 415 DNAEKLILRIRIVNDEAQKGDFEADSAEDDVFLKKVAGSMLTEMALKGIPDINKVFIKQS 236
DNAEKLILRIRI+N+E KGD + +SAEDDVFLKK+ +MLTEMAL+GIPDINKVFIK
Sbjct: 1246 DNAEKLILRIRIMNEETPKGDSQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHG 1305
Query: 235 KVNKFDEEKGFKAETEWMLDTEGVNLLAVMCHEEVDATRTTSNHLIEVMEVLGIEAVRKA 56
KVNKFD+ +GFKAE EWMLDTEGVNLLAV+CH++VDA RTTSNHLIE++EVLGIEAVR++
Sbjct: 1306 KVNKFDQNEGFKAEQEWMLDTEGVNLLAVLCHDDVDAKRTTSNHLIEIIEVLGIEAVRRS 1365
Query: 55 LLDELRVVISFDGSYVNY 2
LLDELRVVISFDGSYVNY
Sbjct: 1366 LLDELRVVISFDGSYVNY 1383
>gb|AFW57310.1| RNA polymerase II large subunit family protein [Zea mays]
Length = 1850
Score = 1409 bits (3647), Expect = 0.0
Identities = 692/798 (86%), Positives = 745/798 (93%)
Frame = -1
Query: 2395 KQVFNLIIPKQINLVRFSAWHQETETGFLTPGDTRVLVERGELLSGTLCKKTLGSSSGSL 2216
KQVFNLIIPKQINL+RFSAWH E E GF+TPGDT V +E+GELLSGTLCKK+LG+ SGSL
Sbjct: 587 KQVFNLIIPKQINLIRFSAWHSEEEKGFITPGDTMVRIEKGELLSGTLCKKSLGTGSGSL 646
Query: 2215 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMETINETISKAKNE 2036
IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADA+TMETIN+TISKAKN
Sbjct: 647 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMETINDTISKAKNA 706
Query: 2035 VKNLIRAAQEKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQRSLSESNNLKAMVTA 1856
VK LI+ A EKQLE EPGRTMMESFENRVNQVLNKARDDAGSSAQ SLSESNNLKAMVTA
Sbjct: 707 VKELIKKAHEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQNSLSESNNLKAMVTA 766
Query: 1855 GSKGSFINISQMTACVGQQNVEGKRIPFGFVGRTLPHFTKDDYGPESRGFVENSYLRGLT 1676
GSKGSFINISQMTACVGQQNVEGKRIPFGF+ RTLPHFTKDDYGPESRGFVENSYLRGLT
Sbjct: 767 GSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLT 826
Query: 1675 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 1496
PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG
Sbjct: 827 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 886
Query: 1495 EDGMDSVWIESQKLDSLKMKKSEFDTTYRYEFDADNWEPDYMLKEHVDDLKTIREFRNVF 1316
EDGMD+VWIESQKLDSLKMKK EFD +RYE D +NW P+YML EHVDDLKTIREFRNVF
Sbjct: 887 EDGMDAVWIESQKLDSLKMKKPEFDNVFRYELDDENWRPNYMLPEHVDDLKTIREFRNVF 946
Query: 1315 DAEVQKLEVDRCQLATDIATTGDNSWPLPVNLKRLLWNAQKTFKVDMREKSDMHPMEIVE 1136
+AEVQKLE DR QL ++I TTGDNSWP+PVNLKRL+WNAQKTFK+D R SDMHPMEIVE
Sbjct: 947 EAEVQKLEADRYQLGSEITTTGDNSWPMPVNLKRLIWNAQKTFKIDFRRPSDMHPMEIVE 1006
Query: 1135 AVDKLQERLKVVPGEDFLSKEAQKNATLFFNILLRSTLASKRVLKEFKLNREAFEWVIGE 956
A+DKLQERLKVVPG+D +S EAQKNATLFFNILLRST ASKRVLKE++L +EAFEWVIGE
Sbjct: 1007 AIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGE 1066
Query: 955 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 776
IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA
Sbjct: 1067 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 1126
Query: 775 KKIKTPSLSVFLNPEISKTKERAKNVQCILEYTCLRSVTHATEVWYDPDPMSTIIEEDVD 596
KKIKTPSLSV+L P++++ KE AKNVQC LEYT LRSVTHATE+WYDPDP+ TIIEED +
Sbjct: 1127 KKIKTPSLSVYLKPQVNQKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDTE 1186
Query: 595 FVRSYYEMPDEEVSPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFSDDMTCIFTD 416
FV+SYYEMPDE++ PDKISPWLLRIELNREMMVDKKLSMADIAEKIN EF DD++CIF D
Sbjct: 1187 FVQSYYEMPDEDIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINREFDDDLSCIFND 1246
Query: 415 DNAEKLILRIRIVNDEAQKGDFEADSAEDDVFLKKVAGSMLTEMALKGIPDINKVFIKQS 236
DNA+KLILRIRI NDEA KG+ + +SAEDDVFLKK+ G+MLTEMAL+GIPDINKVFIK+
Sbjct: 1247 DNADKLILRIRITNDEAPKGEIQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKEG 1306
Query: 235 KVNKFDEEKGFKAETEWMLDTEGVNLLAVMCHEEVDATRTTSNHLIEVMEVLGIEAVRKA 56
KVN F ++ GFKA EWMLDTEGVNLLAVMCHE+VDATRTTSNHLIEV+EVLGIEAVR++
Sbjct: 1307 KVNTFYQDDGFKAANEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRS 1366
Query: 55 LLDELRVVISFDGSYVNY 2
LLDELRVVISFDGSYVNY
Sbjct: 1367 LLDELRVVISFDGSYVNY 1384
>gb|EMJ04257.1| hypothetical protein PRUPE_ppa000093mg [Prunus persica]
Length = 1844
Score = 1408 bits (3645), Expect = 0.0
Identities = 698/798 (87%), Positives = 744/798 (93%)
Frame = -1
Query: 2395 KQVFNLIIPKQINLVRFSAWHQETETGFLTPGDTRVLVERGELLSGTLCKKTLGSSSGSL 2216
KQVFNLIIPKQINL R SAWH E E+G +TPGDT V +E+GELL+GTLCKK LG+S+GSL
Sbjct: 588 KQVFNLIIPKQINLQRTSAWHSEAESGNITPGDTFVRIEKGELLAGTLCKKALGTSTGSL 647
Query: 2215 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMETINETISKAKNE 2036
IHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATME INETISKAKNE
Sbjct: 648 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNE 707
Query: 2035 VKNLIRAAQEKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQRSLSESNNLKAMVTA 1856
VK+LI AQ KQLE EPGRTMM+SFEN+VNQVLN+ARDDAGSSAQ+SLSESNNLKAMVTA
Sbjct: 708 VKDLISKAQSKQLEAEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTA 767
Query: 1855 GSKGSFINISQMTACVGQQNVEGKRIPFGFVGRTLPHFTKDDYGPESRGFVENSYLRGLT 1676
GSKGSFINISQMTACVGQQNVEGKRIP+GF+ RTLPHFTKDDYGPESRGFVENSYLRGLT
Sbjct: 768 GSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLT 827
Query: 1675 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 1496
PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG
Sbjct: 828 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 887
Query: 1495 EDGMDSVWIESQKLDSLKMKKSEFDTTYRYEFDADNWEPDYMLKEHVDDLKTIREFRNVF 1316
EDGMD+VWIESQKLDSLKMKKSEFD T+ YE D +NW PDYML EHV+DLKTIREFRNVF
Sbjct: 888 EDGMDAVWIESQKLDSLKMKKSEFDKTFSYELDDENWNPDYMLHEHVEDLKTIREFRNVF 947
Query: 1315 DAEVQKLEVDRCQLATDIATTGDNSWPLPVNLKRLLWNAQKTFKVDMREKSDMHPMEIVE 1136
DAEVQKLE DR QL T+IA TGDNSWPLPVNLKRL+WNAQKTFK+D R SDMHPMEIVE
Sbjct: 948 DAEVQKLETDRLQLGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVE 1007
Query: 1135 AVDKLQERLKVVPGEDFLSKEAQKNATLFFNILLRSTLASKRVLKEFKLNREAFEWVIGE 956
A+DKLQERLKVVPG+D LS EAQKNATLFF+ILLRST ASKRVL E++L REAFEWVIGE
Sbjct: 1008 AIDKLQERLKVVPGDDLLSVEAQKNATLFFSILLRSTFASKRVLDEYRLTREAFEWVIGE 1067
Query: 955 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 776
IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA
Sbjct: 1068 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 1127
Query: 775 KKIKTPSLSVFLNPEISKTKERAKNVQCILEYTCLRSVTHATEVWYDPDPMSTIIEEDVD 596
K+IKTPSLSV+L PE +KTKERAKNVQC LEYT LRSVT ATEVWYDPDPMSTIIEEDVD
Sbjct: 1128 KRIKTPSLSVYLKPEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVD 1187
Query: 595 FVRSYYEMPDEEVSPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFSDDMTCIFTD 416
FV SYYEMPDEEV+PDKISPWLLRIELNREMMVDKKLSMADIAEKINLEF DD+TCIF D
Sbjct: 1188 FVNSYYEMPDEEVNPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFND 1247
Query: 415 DNAEKLILRIRIVNDEAQKGDFEADSAEDDVFLKKVAGSMLTEMALKGIPDINKVFIKQS 236
DNAEKLILRIRI+N EA KG+ +SAEDDVFLKK+ +MLTEMAL+GIPDINKVFIK
Sbjct: 1248 DNAEKLILRIRIMNAEAPKGELVDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHG 1307
Query: 235 KVNKFDEEKGFKAETEWMLDTEGVNLLAVMCHEEVDATRTTSNHLIEVMEVLGIEAVRKA 56
KVNKFD +GFKAE EWMLDTEGVNLLAV+CH++VDA RTTSNHLIE++E+LGIEAVR++
Sbjct: 1308 KVNKFDPNEGFKAEQEWMLDTEGVNLLAVLCHDDVDARRTTSNHLIEILEILGIEAVRRS 1367
Query: 55 LLDELRVVISFDGSYVNY 2
LLDELRVVISFDGSYVNY
Sbjct: 1368 LLDELRVVISFDGSYVNY 1385
>ref|XP_002443877.1| hypothetical protein SORBIDRAFT_07g003680 [Sorghum bicolor]
gi|241940227|gb|EES13372.1| hypothetical protein
SORBIDRAFT_07g003680 [Sorghum bicolor]
Length = 1857
Score = 1407 bits (3643), Expect = 0.0
Identities = 690/798 (86%), Positives = 748/798 (93%)
Frame = -1
Query: 2395 KQVFNLIIPKQINLVRFSAWHQETETGFLTPGDTRVLVERGELLSGTLCKKTLGSSSGSL 2216
KQVFNLIIPKQINL+RFSAWH E E GF+TPGDT V +E+GELLSGTLCKK+LG+ +GSL
Sbjct: 587 KQVFNLIIPKQINLIRFSAWHSEEEKGFITPGDTMVRIEKGELLSGTLCKKSLGTGTGSL 646
Query: 2215 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMETINETISKAKNE 2036
IH+IWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADA+TM+TIN+TI KAK+E
Sbjct: 647 IHIIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMQTINDTICKAKDE 706
Query: 2035 VKNLIRAAQEKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQRSLSESNNLKAMVTA 1856
VK LI+ A EKQLE EPGRTMMESFENRVNQVLNKARDDAGSSAQ+SLSESNNLKAMVTA
Sbjct: 707 VKELIKKAHEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTA 766
Query: 1855 GSKGSFINISQMTACVGQQNVEGKRIPFGFVGRTLPHFTKDDYGPESRGFVENSYLRGLT 1676
GSKGSFINISQMTACVGQQNVEGKRIPFGF+ RTLPHFTKDDYGPESRGFVENSYLRGLT
Sbjct: 767 GSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLT 826
Query: 1675 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 1496
PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG
Sbjct: 827 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 886
Query: 1495 EDGMDSVWIESQKLDSLKMKKSEFDTTYRYEFDADNWEPDYMLKEHVDDLKTIREFRNVF 1316
EDGMD+VWIESQKLDSLKMKK EFD +RYE D +NW P+YML EHVDDLKTIREFRNVF
Sbjct: 887 EDGMDAVWIESQKLDSLKMKKPEFDNLFRYELDDENWRPNYMLPEHVDDLKTIREFRNVF 946
Query: 1315 DAEVQKLEVDRCQLATDIATTGDNSWPLPVNLKRLLWNAQKTFKVDMREKSDMHPMEIVE 1136
+AEVQKLE DR QL T+IATTGDNSWP+PVNLKRL+WNAQKTF++D R SDMHPMEIVE
Sbjct: 947 EAEVQKLEADRYQLGTEIATTGDNSWPMPVNLKRLIWNAQKTFRIDFRRPSDMHPMEIVE 1006
Query: 1135 AVDKLQERLKVVPGEDFLSKEAQKNATLFFNILLRSTLASKRVLKEFKLNREAFEWVIGE 956
AVDKLQERLKVVPG+D +S EAQKNATLFFNILLRST ASKRVLKE++L +EAFEWVIGE
Sbjct: 1007 AVDKLQERLKVVPGDDPMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGE 1066
Query: 955 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 776
IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA
Sbjct: 1067 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 1126
Query: 775 KKIKTPSLSVFLNPEISKTKERAKNVQCILEYTCLRSVTHATEVWYDPDPMSTIIEEDVD 596
KKIKTPSLSV+L PE+++ KE AKNVQC LEYT LRSVTHATE+WYDPDP+ TIIEED +
Sbjct: 1127 KKIKTPSLSVYLKPEVNQKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDAE 1186
Query: 595 FVRSYYEMPDEEVSPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFSDDMTCIFTD 416
FV+SYYEMPDE++ PDKISPWLLRIELNREMMVDKKLSMADIA+KIN EF DD++CIF D
Sbjct: 1187 FVQSYYEMPDEDIDPDKISPWLLRIELNREMMVDKKLSMADIADKINREFDDDLSCIFND 1246
Query: 415 DNAEKLILRIRIVNDEAQKGDFEADSAEDDVFLKKVAGSMLTEMALKGIPDINKVFIKQS 236
DNA+KLILRIRI NDEA KG+ + +SAEDDVFLKK+ G+MLTEMAL+GIPDINKVFIK+
Sbjct: 1247 DNADKLILRIRITNDEAPKGEIQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKEG 1306
Query: 235 KVNKFDEEKGFKAETEWMLDTEGVNLLAVMCHEEVDATRTTSNHLIEVMEVLGIEAVRKA 56
KVN F +++GFKA EWMLDTEGVNLLAVMCHE+VDATRTTSNHLIEV+EVLGIEAVR++
Sbjct: 1307 KVNTFYQDEGFKAANEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRS 1366
Query: 55 LLDELRVVISFDGSYVNY 2
LLDELRVVISFDGSYVNY
Sbjct: 1367 LLDELRVVISFDGSYVNY 1384
>ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis
sativus]
Length = 1853
Score = 1404 bits (3634), Expect = 0.0
Identities = 697/798 (87%), Positives = 747/798 (93%)
Frame = -1
Query: 2395 KQVFNLIIPKQINLVRFSAWHQETETGFLTPGDTRVLVERGELLSGTLCKKTLGSSSGSL 2216
KQVFNLIIPKQINL R SAWH E+ETG +TPGDT V +E+GELLSGTLCKK LG+S+GSL
Sbjct: 588 KQVFNLIIPKQINLTRTSAWHSESETGHITPGDTFVRIEKGELLSGTLCKKALGTSTGSL 647
Query: 2215 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMETINETISKAKNE 2036
IHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATME INETIS AKNE
Sbjct: 648 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNE 707
Query: 2035 VKNLIRAAQEKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQRSLSESNNLKAMVTA 1856
VKNLI+ AQE+ LEPEPGRTMM+SFEN+VNQVLNKARDDAGSSAQ+SLSESNNLKAMVTA
Sbjct: 708 VKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTA 767
Query: 1855 GSKGSFINISQMTACVGQQNVEGKRIPFGFVGRTLPHFTKDDYGPESRGFVENSYLRGLT 1676
GSKGSFINISQMTACVGQQNVEGKRIPFGF+ RTLPHFTKDDYGPESRGFVENSYLRGLT
Sbjct: 768 GSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLT 827
Query: 1675 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 1496
PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG
Sbjct: 828 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 887
Query: 1495 EDGMDSVWIESQKLDSLKMKKSEFDTTYRYEFDADNWEPDYMLKEHVDDLKTIREFRNVF 1316
EDGMD+VWIESQKLDSLKMKK EF+ +RYEF+ +NW+P+YML EHV+DLKTIREFRNVF
Sbjct: 888 EDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVF 947
Query: 1315 DAEVQKLEVDRCQLATDIATTGDNSWPLPVNLKRLLWNAQKTFKVDMREKSDMHPMEIVE 1136
+AEVQKLE DR QL T+IATTG+NSWP+PVNLKRL+ NAQKTFK+D R SDMHPMEIVE
Sbjct: 948 EAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVE 1007
Query: 1135 AVDKLQERLKVVPGEDFLSKEAQKNATLFFNILLRSTLASKRVLKEFKLNREAFEWVIGE 956
A+DKLQERLKVVPGED LS EAQKNATLFFNILLRST ASKRVL E++L REAFEWVIGE
Sbjct: 1008 AIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGE 1067
Query: 955 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 776
IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA
Sbjct: 1068 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 1127
Query: 775 KKIKTPSLSVFLNPEISKTKERAKNVQCILEYTCLRSVTHATEVWYDPDPMSTIIEEDVD 596
K+IKTPSLSV+L PE +KTKERAK VQC LEYT LRSVT ATEVWYDPDPMSTIIEED+D
Sbjct: 1128 KRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDID 1187
Query: 595 FVRSYYEMPDEEVSPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFSDDMTCIFTD 416
FV+SYYEMPDEE++P+KISPWLLRIELNREMMVDKKLSMA+IAEKINLEF DD+TCIF D
Sbjct: 1188 FVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFND 1247
Query: 415 DNAEKLILRIRIVNDEAQKGDFEADSAEDDVFLKKVAGSMLTEMALKGIPDINKVFIKQS 236
DNAEKLILRIRI+NDEA KG+ +SAEDDVFLKK+ +MLTEMAL+GIPDINKVFIK
Sbjct: 1248 DNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCG 1307
Query: 235 KVNKFDEEKGFKAETEWMLDTEGVNLLAVMCHEEVDATRTTSNHLIEVMEVLGIEAVRKA 56
KVNKFDE +GFK E EWMLDTEGVNLLAVM HE+VDA RTTSNHLIEV+EVLGIEAVR++
Sbjct: 1308 KVNKFDENEGFKPEMEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRS 1367
Query: 55 LLDELRVVISFDGSYVNY 2
LLDELRVVISFDGSYVNY
Sbjct: 1368 LLDELRVVISFDGSYVNY 1385
>ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit RPB1-like [Cucumis sativus]
Length = 1832
Score = 1404 bits (3634), Expect = 0.0
Identities = 697/798 (87%), Positives = 747/798 (93%)
Frame = -1
Query: 2395 KQVFNLIIPKQINLVRFSAWHQETETGFLTPGDTRVLVERGELLSGTLCKKTLGSSSGSL 2216
KQVFNLIIPKQINL R SAWH E+ETG +TPGDT V +E+GELLSGTLCKK LG+S+GSL
Sbjct: 588 KQVFNLIIPKQINLTRTSAWHSESETGHITPGDTFVRIEKGELLSGTLCKKALGTSTGSL 647
Query: 2215 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMETINETISKAKNE 2036
IHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATME INETIS AKNE
Sbjct: 648 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNE 707
Query: 2035 VKNLIRAAQEKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQRSLSESNNLKAMVTA 1856
VKNLI+ AQE+ LEPEPGRTMM+SFEN+VNQVLNKARDDAGSSAQ+SLSESNNLKAMVTA
Sbjct: 708 VKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTA 767
Query: 1855 GSKGSFINISQMTACVGQQNVEGKRIPFGFVGRTLPHFTKDDYGPESRGFVENSYLRGLT 1676
GSKGSFINISQMTACVGQQNVEGKRIPFGF+ RTLPHFTKDDYGPESRGFVENSYLRGLT
Sbjct: 768 GSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLT 827
Query: 1675 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 1496
PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG
Sbjct: 828 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 887
Query: 1495 EDGMDSVWIESQKLDSLKMKKSEFDTTYRYEFDADNWEPDYMLKEHVDDLKTIREFRNVF 1316
EDGMD+VWIESQKLDSLKMKK EF+ +RYEF+ +NW+P+YML EHV+DLKTIREFRNVF
Sbjct: 888 EDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVF 947
Query: 1315 DAEVQKLEVDRCQLATDIATTGDNSWPLPVNLKRLLWNAQKTFKVDMREKSDMHPMEIVE 1136
+AEVQKLE DR QL T+IATTG+NSWP+PVNLKRL+ NAQKTFK+D R SDMHPMEIVE
Sbjct: 948 EAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVE 1007
Query: 1135 AVDKLQERLKVVPGEDFLSKEAQKNATLFFNILLRSTLASKRVLKEFKLNREAFEWVIGE 956
A+DKLQERLKVVPGED LS EAQKNATLFFNILLRST ASKRVL E++L REAFEWVIGE
Sbjct: 1008 AIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGE 1067
Query: 955 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 776
IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA
Sbjct: 1068 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 1127
Query: 775 KKIKTPSLSVFLNPEISKTKERAKNVQCILEYTCLRSVTHATEVWYDPDPMSTIIEEDVD 596
K+IKTPSLSV+L PE +KTKERAK VQC LEYT LRSVT ATEVWYDPDPMSTIIEED+D
Sbjct: 1128 KRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDID 1187
Query: 595 FVRSYYEMPDEEVSPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFSDDMTCIFTD 416
FV+SYYEMPDEE++P+KISPWLLRIELNREMMVDKKLSMA+IAEKINLEF DD+TCIF D
Sbjct: 1188 FVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFND 1247
Query: 415 DNAEKLILRIRIVNDEAQKGDFEADSAEDDVFLKKVAGSMLTEMALKGIPDINKVFIKQS 236
DNAEKLILRIRI+NDEA KG+ +SAEDDVFLKK+ +MLTEMAL+GIPDINKVFIK
Sbjct: 1248 DNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCG 1307
Query: 235 KVNKFDEEKGFKAETEWMLDTEGVNLLAVMCHEEVDATRTTSNHLIEVMEVLGIEAVRKA 56
KVNKFDE +GFK E EWMLDTEGVNLLAVM HE+VDA RTTSNHLIEV+EVLGIEAVR++
Sbjct: 1308 KVNKFDENEGFKPEMEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRS 1367
Query: 55 LLDELRVVISFDGSYVNY 2
LLDELRVVISFDGSYVNY
Sbjct: 1368 LLDELRVVISFDGSYVNY 1385
>ref|XP_002530639.1| DNA-directed RNA polymerase II largest subunit, putative [Ricinus
communis] gi|223529812|gb|EEF31747.1| DNA-directed RNA
polymerase II largest subunit, putative [Ricinus
communis]
Length = 1855
Score = 1396 bits (3613), Expect = 0.0
Identities = 691/798 (86%), Positives = 745/798 (93%)
Frame = -1
Query: 2395 KQVFNLIIPKQINLVRFSAWHQETETGFLTPGDTRVLVERGELLSGTLCKKTLGSSSGSL 2216
KQVFNLIIPKQINL+R +AWH ++E G +TPGDT V +E+GELLSGT+CKKTLG+S+GSL
Sbjct: 588 KQVFNLIIPKQINLIRTAAWHSDSERGVITPGDTLVRIEKGELLSGTVCKKTLGTSTGSL 647
Query: 2215 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMETINETISKAKNE 2036
IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATME INETIS AKN
Sbjct: 648 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISNAKNA 707
Query: 2035 VKNLIRAAQEKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQRSLSESNNLKAMVTA 1856
VK LIR AQ K+LEP+PGRTMMESFEN VNQVLN+ARDDAGSSAQ+SLSESNNLKAMVTA
Sbjct: 708 VKELIRKAQNKELEPKPGRTMMESFENEVNQVLNRARDDAGSSAQKSLSESNNLKAMVTA 767
Query: 1855 GSKGSFINISQMTACVGQQNVEGKRIPFGFVGRTLPHFTKDDYGPESRGFVENSYLRGLT 1676
GSKGSFINISQMTACVGQQNVEGKRIP+GF+ RTLPHFTKDDYGPESRGFVENSYLRGLT
Sbjct: 768 GSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLT 827
Query: 1675 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 1496
PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG
Sbjct: 828 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 887
Query: 1495 EDGMDSVWIESQKLDSLKMKKSEFDTTYRYEFDADNWEPDYMLKEHVDDLKTIREFRNVF 1316
EDGMD+VWIESQKLDSLKMKKSEFD ++YE D +NW P YM ++H+DDLK IRE R+VF
Sbjct: 888 EDGMDAVWIESQKLDSLKMKKSEFDRVFKYELDDENWNPTYMYQDHIDDLKNIRELRDVF 947
Query: 1315 DAEVQKLEVDRCQLATDIATTGDNSWPLPVNLKRLLWNAQKTFKVDMREKSDMHPMEIVE 1136
DAEVQKLE DR QL T+IATTGD+SWPLPVNL+RL+WNAQKTFKVD R SD+HPME VE
Sbjct: 948 DAEVQKLEADRYQLGTEIATTGDSSWPLPVNLRRLIWNAQKTFKVDKRRPSDIHPMEAVE 1007
Query: 1135 AVDKLQERLKVVPGEDFLSKEAQKNATLFFNILLRSTLASKRVLKEFKLNREAFEWVIGE 956
AVDKLQERLKVVPG+D LS EAQKNATLFF ILLRSTLASKRVL++++L REAF+WVIGE
Sbjct: 1008 AVDKLQERLKVVPGDDPLSVEAQKNATLFFGILLRSTLASKRVLEDYRLTREAFDWVIGE 1067
Query: 955 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 776
IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA
Sbjct: 1068 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 1127
Query: 775 KKIKTPSLSVFLNPEISKTKERAKNVQCILEYTCLRSVTHATEVWYDPDPMSTIIEEDVD 596
KKIKTPSLS+FL PE +KTKERAKNVQC LEYT LRSVT ATEVWYDPDPMSTIIEEDVD
Sbjct: 1128 KKIKTPSLSIFLIPECNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVD 1187
Query: 595 FVRSYYEMPDEEVSPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFSDDMTCIFTD 416
FV+SYYEMPDEE+SP+KISPWLLRIELNREMMVDKKL+MADIAEKINLEF DD+TCIF D
Sbjct: 1188 FVKSYYEMPDEEISPEKISPWLLRIELNREMMVDKKLNMADIAEKINLEFDDDLTCIFND 1247
Query: 415 DNAEKLILRIRIVNDEAQKGDFEADSAEDDVFLKKVAGSMLTEMALKGIPDINKVFIKQS 236
DNAEKLILRIRI+NDEA KG+ +SAEDDVFLKK+ +MLTEMAL+GIPDINKVFIKQS
Sbjct: 1248 DNAEKLILRIRIMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQS 1307
Query: 235 KVNKFDEEKGFKAETEWMLDTEGVNLLAVMCHEEVDATRTTSNHLIEVMEVLGIEAVRKA 56
KV+KFDE +GFK EWMLDTEGVNLLAVMC+E VDA RTTSNHLIEV+EVLGIEAVR++
Sbjct: 1308 KVSKFDENEGFKTIEEWMLDTEGVNLLAVMCNENVDARRTTSNHLIEVIEVLGIEAVRRS 1367
Query: 55 LLDELRVVISFDGSYVNY 2
LLDELRVVISFDGSYVNY
Sbjct: 1368 LLDELRVVISFDGSYVNY 1385
>gb|ESW29856.1| hypothetical protein PHAVU_002G104500g [Phaseolus vulgaris]
Length = 1834
Score = 1393 bits (3605), Expect = 0.0
Identities = 687/798 (86%), Positives = 750/798 (93%)
Frame = -1
Query: 2395 KQVFNLIIPKQINLVRFSAWHQETETGFLTPGDTRVLVERGELLSGTLCKKTLGSSSGSL 2216
KQVFNLIIPK INL+R+S+WH E+E G +TPGDT V +E+GELL+GTLCKKTLG+S+GSL
Sbjct: 588 KQVFNLIIPKPINLIRYSSWHSESERGSITPGDTMVRIEKGELLTGTLCKKTLGTSTGSL 647
Query: 2215 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMETINETISKAKNE 2036
IHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMETIN+TIS AK +
Sbjct: 648 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMETINQTISAAKEK 707
Query: 2035 VKNLIRAAQEKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQRSLSESNNLKAMVTA 1856
VK LIR AQEK+LE EPGRTMM+SFENRVNQ LN+ARDDAG+SAQ+SLSESNNLKAMVTA
Sbjct: 708 VKQLIRDAQEKKLEAEPGRTMMDSFENRVNQTLNRARDDAGNSAQKSLSESNNLKAMVTA 767
Query: 1855 GSKGSFINISQMTACVGQQNVEGKRIPFGFVGRTLPHFTKDDYGPESRGFVENSYLRGLT 1676
GSKGSFINISQMTACVGQQNVEGKRIP+GF+ RTLPHFTKDDYGPESRGFVENSYLRGLT
Sbjct: 768 GSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLT 827
Query: 1675 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 1496
PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG
Sbjct: 828 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 887
Query: 1495 EDGMDSVWIESQKLDSLKMKKSEFDTTYRYEFDADNWEPDYMLKEHVDDLKTIREFRNVF 1316
EDGMD+VWIE+QKLDSLKMKK+EFD +RYEFD +NW+P YML+E V+DLKTIREFRNVF
Sbjct: 888 EDGMDAVWIETQKLDSLKMKKTEFDRVFRYEFDDENWKPTYMLEEPVEDLKTIREFRNVF 947
Query: 1315 DAEVQKLEVDRCQLATDIATTGDNSWPLPVNLKRLLWNAQKTFKVDMREKSDMHPMEIVE 1136
+AEVQKLE DR QLAT+IATTGD+S PLPVNLKRL+WNAQKTFKVD R SDMHPMEIVE
Sbjct: 948 EAEVQKLEADRYQLATEIATTGDSSLPLPVNLKRLIWNAQKTFKVDFRRPSDMHPMEIVE 1007
Query: 1135 AVDKLQERLKVVPGEDFLSKEAQKNATLFFNILLRSTLASKRVLKEFKLNREAFEWVIGE 956
A+DKLQERL+VVPGED LS+EAQKNATL FNILLRST ASKRVL+E++L+REAFEWV+GE
Sbjct: 1008 AIDKLQERLRVVPGEDLLSQEAQKNATLLFNILLRSTFASKRVLEEYRLSREAFEWVVGE 1067
Query: 955 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 776
IESRFLQSLVA GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA
Sbjct: 1068 IESRFLQSLVASGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 1127
Query: 775 KKIKTPSLSVFLNPEISKTKERAKNVQCILEYTCLRSVTHATEVWYDPDPMSTIIEEDVD 596
K+IKTPSLSV+LNP++ KTKERAK+VQC LEYT LRSVT ATEVWYDP+PMSTII+EDVD
Sbjct: 1128 KRIKTPSLSVYLNPDVGKTKERAKSVQCALEYTTLRSVTQATEVWYDPEPMSTIIDEDVD 1187
Query: 595 FVRSYYEMPDEEVSPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFSDDMTCIFTD 416
FV+SYYEMPDEEV+ +KISPWLLRIELNREMMVDKKLSMADIAEKINLEF DD+TCIF D
Sbjct: 1188 FVKSYYEMPDEEVALEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFND 1247
Query: 415 DNAEKLILRIRIVNDEAQKGDFEADSAEDDVFLKKVAGSMLTEMALKGIPDINKVFIKQS 236
DNAEKLILRIRI+NDEA KG+ + +SAEDDVFLKK+ +MLTEM L+GIPDINKVFIK +
Sbjct: 1248 DNAEKLILRIRIMNDEAPKGEIQDESAEDDVFLKKIESNMLTEMTLRGIPDINKVFIKNT 1307
Query: 235 KVNKFDEEKGFKAETEWMLDTEGVNLLAVMCHEEVDATRTTSNHLIEVMEVLGIEAVRKA 56
KV KFDE +GFK EWMLDTEGVNLLAVMCHE+VDATRTTSNHLIEV+EVLGIEAVR+A
Sbjct: 1308 KVQKFDESEGFKPNEEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRA 1367
Query: 55 LLDELRVVISFDGSYVNY 2
LLDELRVVISFDGSYVNY
Sbjct: 1368 LLDELRVVISFDGSYVNY 1385
>ref|XP_006590737.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Glycine
max]
Length = 1827
Score = 1392 bits (3604), Expect = 0.0
Identities = 688/798 (86%), Positives = 748/798 (93%)
Frame = -1
Query: 2395 KQVFNLIIPKQINLVRFSAWHQETETGFLTPGDTRVLVERGELLSGTLCKKTLGSSSGSL 2216
KQVFNLIIPKQINL+R+S+WH E+E G +TPGDT V +E+GELL+GTLCKKTLG+S+GSL
Sbjct: 588 KQVFNLIIPKQINLIRYSSWHSESERGSITPGDTMVRIEKGELLTGTLCKKTLGTSTGSL 647
Query: 2215 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMETINETISKAKNE 2036
IHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMETIN+TIS AK +
Sbjct: 648 IHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMETINQTISAAKEK 707
Query: 2035 VKNLIRAAQEKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQRSLSESNNLKAMVTA 1856
VK LIR AQEK+LE EPGRTMM+SFENRVNQ LN+ARDDAG+SAQ+SLSESNNLKAMVTA
Sbjct: 708 VKQLIREAQEKKLEAEPGRTMMDSFENRVNQTLNRARDDAGNSAQKSLSESNNLKAMVTA 767
Query: 1855 GSKGSFINISQMTACVGQQNVEGKRIPFGFVGRTLPHFTKDDYGPESRGFVENSYLRGLT 1676
GSKGSFINISQMTACVGQQNVEGKRIP+GF+ RTLPHFTKDDYGPESRGFVENSYLRGLT
Sbjct: 768 GSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLT 827
Query: 1675 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 1496
PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG
Sbjct: 828 PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYG 887
Query: 1495 EDGMDSVWIESQKLDSLKMKKSEFDTTYRYEFDADNWEPDYMLKEHVDDLKTIREFRNVF 1316
EDGMD+VWIE+QKLDSLKMKK+EFD +RYEFD +NW+P YML+E V+DLKTIREFRNVF
Sbjct: 888 EDGMDAVWIETQKLDSLKMKKTEFDRVFRYEFDDENWKPTYMLEEPVEDLKTIREFRNVF 947
Query: 1315 DAEVQKLEVDRCQLATDIATTGDNSWPLPVNLKRLLWNAQKTFKVDMREKSDMHPMEIVE 1136
+AEVQKLE DR QLAT+IATTGD+S PLPVNLKRL+WNAQKTFKVD R SDMHPMEIVE
Sbjct: 948 EAEVQKLEADRYQLATEIATTGDSSLPLPVNLKRLIWNAQKTFKVDFRRPSDMHPMEIVE 1007
Query: 1135 AVDKLQERLKVVPGEDFLSKEAQKNATLFFNILLRSTLASKRVLKEFKLNREAFEWVIGE 956
A+DKLQERLKVVPGED LS+EAQKNATL FNILLRST ASKRVL+E++L+REAFEWV+GE
Sbjct: 1008 AIDKLQERLKVVPGEDLLSQEAQKNATLLFNILLRSTFASKRVLEEYRLSREAFEWVVGE 1067
Query: 955 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 776
IESRFLQSLVA GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA
Sbjct: 1068 IESRFLQSLVASGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA 1127
Query: 775 KKIKTPSLSVFLNPEISKTKERAKNVQCILEYTCLRSVTHATEVWYDPDPMSTIIEEDVD 596
K+IKTPSLSV+L ++ KTKERAK+VQC LEYT LRSVT ATEVWYDPDPMSTIIEED D
Sbjct: 1128 KRIKTPSLSVYLRSDVGKTKERAKSVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDAD 1187
Query: 595 FVRSYYEMPDEEVSPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFSDDMTCIFTD 416
FV+SYYEMPDEEV+ +KISPWLLRIELNREMMVDKKLSMADIAEKINLEF DD+TCIF D
Sbjct: 1188 FVKSYYEMPDEEVALEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFND 1247
Query: 415 DNAEKLILRIRIVNDEAQKGDFEADSAEDDVFLKKVAGSMLTEMALKGIPDINKVFIKQS 236
DNAEKLILRIRI+NDEA KG+ + +SAEDDVFLKK+ +MLTEM L+GIPDINKVFIK +
Sbjct: 1248 DNAEKLILRIRIMNDEAPKGEIQDESAEDDVFLKKIESNMLTEMTLRGIPDINKVFIKNT 1307
Query: 235 KVNKFDEEKGFKAETEWMLDTEGVNLLAVMCHEEVDATRTTSNHLIEVMEVLGIEAVRKA 56
KV KFDE +GFK EWMLDTEGVNLLAVMCHE+VDATRTTSNHLIEV+EVLGIEAVR+A
Sbjct: 1308 KVQKFDENQGFKPNEEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRA 1367
Query: 55 LLDELRVVISFDGSYVNY 2
LLDELRVVISFDGSYVNY
Sbjct: 1368 LLDELRVVISFDGSYVNY 1385