BLASTX nr result

ID: Achyranthes23_contig00013215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00013215
         (593 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517613.1| pentatricopeptide repeat-containing protein,...    58   2e-06
ref|XP_006465489.1| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06
ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06

>ref|XP_002517613.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543245|gb|EEF44777.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 400

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/41 (60%), Positives = 32/41 (78%)
 Frame = +2

Query: 212 YKNMHLFGCMRTIKSLNAILKVLAQTCDLEAII*FLMEAPK 334
           + +MH++GC RT+KS NA LKVL +TCDLEAI  FL E P+
Sbjct: 129 FNDMHMYGCKRTVKSFNAALKVLTETCDLEAIKAFLSEVPE 169


>ref|XP_006465489.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Citrus sinensis]
          Length = 1259

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
 Frame = +2

Query: 149 LLTSKFQIIKH-LDTNNRRWYLYKNMHLFGCMRTIKSLNAILKVLAQTCDLEAII*FLME 325
           +L  K  +IKH +DT       + +MHL+GC RT+KSLNA LKVL ++ DL+AI  FLME
Sbjct: 123 MLYGKAGMIKHAMDT-------FYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLME 175

Query: 326 APK 334
            P+
Sbjct: 176 VPE 178


>ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
           mitochondrial-like [Cucumis sativus]
           gi|449484169|ref|XP_004156805.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g80150,
           mitochondrial-like [Cucumis sativus]
          Length = 399

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
 Frame = +2

Query: 149 LLTSKFQIIKH-LDTNNRRWYLYKNMHLFGCMRTIKSLNAILKVLAQTCDLEAII*FLME 325
           +L  K ++IKH LDT       + +MHL+GC+RT+KS NA+LKVL ++ DL A+  FL E
Sbjct: 113 MLYGKAEMIKHALDT-------FYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSE 165

Query: 326 APK 334
           AP+
Sbjct: 166 APE 168


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