BLASTX nr result

ID: Achyranthes23_contig00012415 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00012415
         (848 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303937.1| hypothetical protein POPTR_0003s19420g [Popu...    79   2e-12
ref|XP_004230035.1| PREDICTED: sigma factor binding protein 1, c...    72   3e-10
ref|XP_006368633.1| hypothetical protein POPTR_0001s06690g [Popu...    65   3e-08
ref|XP_004308571.1| PREDICTED: sigma factor binding protein 2, c...    63   1e-07
gb|EMJ19788.1| hypothetical protein PRUPE_ppa013276mg [Prunus pe...    62   3e-07
ref|XP_002513029.1| protein with unknown function [Ricinus commu...    61   6e-07
emb|CAN69541.1| hypothetical protein VITISV_025656 [Vitis vinifera]    60   1e-06
ref|XP_004142385.1| PREDICTED: sigma factor binding protein 1, c...    59   2e-06
dbj|BAI52954.1| sigma factor binding protein 1 [Citrullus lanatu...    57   6e-06

>ref|XP_002303937.1| hypothetical protein POPTR_0003s19420g [Populus trichocarpa]
           gi|222841369|gb|EEE78916.1| hypothetical protein
           POPTR_0003s19420g [Populus trichocarpa]
          Length = 138

 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 53/122 (43%), Positives = 67/122 (54%), Gaps = 9/122 (7%)
 Frame = -1

Query: 461 AFKVVYISTPMKVTTSASTFRETVQELTGRESDVVRIMETCGGQDTWLIP------DHHN 300
           A KVVYIS+PMKV TSAS FR  VQELTG++SD  R M+  G +D+  IP      DHH 
Sbjct: 22  AIKVVYISSPMKVKTSASKFRALVQELTGKDSDAERFMDINGARDSLEIPHQTAEYDHHP 81

Query: 299 SNKGMITTSTERSSPSNTSADELVEPFNGVFVRGQETNFGLFDHTSVLYDQLFH---HLD 129
           S    +T S    SPS TS++  +   +G F    E +F       +L   LFH    LD
Sbjct: 82  S-VFPLTNSCNDQSPSTTSSESFLGSLDGEFFPSMEGSF-----MGMLQPSLFHESFQLD 135

Query: 128 IL 123
           +L
Sbjct: 136 VL 137


>ref|XP_004230035.1| PREDICTED: sigma factor binding protein 1, chloroplastic-like
           [Solanum lycopersicum]
          Length = 158

 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 46/107 (42%), Positives = 61/107 (57%)
 Frame = -1

Query: 458 FKVVYISTPMKVTTSASTFRETVQELTGRESDVVRIMETCGGQDTWLIPDHHNSNKGMIT 279
           FKVVYISTPMKV TSAS FR  VQELTGR+SD+ RIMET G    +   D H+       
Sbjct: 21  FKVVYISTPMKVKTSASRFRSLVQELTGRDSDIARIMETNGSITEY--EDIHSERDDFNE 78

Query: 278 TSTERSSPSNTSADELVEPFNGVFVRGQETNFGLFDHTSVLYDQLFH 138
              + SSPS++S   L +  N   +  +  N+ +  +    +D LF+
Sbjct: 79  LPVKSSSPSSSSL--LAKSSNSTPMSSESDNYFIEPN----FDDLFN 119


>ref|XP_006368633.1| hypothetical protein POPTR_0001s06690g [Populus trichocarpa]
           gi|550346683|gb|ERP65202.1| hypothetical protein
           POPTR_0001s06690g [Populus trichocarpa]
          Length = 151

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 42/109 (38%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
 Frame = -1

Query: 461 AFKVVYISTPMKVTTSASTFRETVQELTGRESDVVRIMETCGGQDTWLIPDHHNSNKGMI 282
           A KVVYIS+PMKV TSAS FR  VQELTG++SD  R M+                    +
Sbjct: 15  AIKVVYISSPMKVKTSASEFRALVQELTGKDSDAARFMDI------------------NV 56

Query: 281 TTSTERSSPSNTSADELVEPFNG-VFVRGQETNFGLFDHTSVLYDQLFH 138
            ++    SPS TS++  +E F+G +F   +E+ F       +L   LFH
Sbjct: 57  PSTNSSQSPSTTSSESFLESFDGELFPSMEESTF-----MGMLQSSLFH 100


>ref|XP_004308571.1| PREDICTED: sigma factor binding protein 2, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 132

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 38/82 (46%), Positives = 45/82 (54%)
 Frame = -1

Query: 455 KVVYISTPMKVTTSASTFRETVQELTGRESDVVRIMETCGGQDTWLIPDHHNSNKGMITT 276
           KVVYIS+PMKV TSAS FR  VQELTGR+SD  R MET GG        HH  +K  +  
Sbjct: 24  KVVYISSPMKVQTSASKFRALVQELTGRDSDAERFMETNGGD------GHHRHHK--VPE 75

Query: 275 STERSSPSNTSADELVEPFNGV 210
            +          D LV P + +
Sbjct: 76  FSHEKQLKEADRDHLVFPHHQI 97


>gb|EMJ19788.1| hypothetical protein PRUPE_ppa013276mg [Prunus persica]
          Length = 131

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 41/96 (42%), Positives = 51/96 (53%), Gaps = 13/96 (13%)
 Frame = -1

Query: 455 KVVYISTPMKVTTSASTFRETVQELTGRESDVVRIMETCGG-----------QDTWLIPD 309
           KVVYIS+PMKV TSAS FR  VQELTGR+SD  R MET G            Q    +  
Sbjct: 25  KVVYISSPMKVKTSASKFRALVQELTGRDSDAERFMETKGAHYQNVHELTHEQQLKGVDH 84

Query: 308 HHNSNKGMITTSTERSS--PSNTSADELVEPFNGVF 207
            H+ + G++      +S       +D L EPF+G F
Sbjct: 85  DHDHDHGLLPQLPFSNSFFEFPNCSDALFEPFSGHF 120


>ref|XP_002513029.1| protein with unknown function [Ricinus communis]
           gi|223548040|gb|EEF49532.1| protein with unknown
           function [Ricinus communis]
          Length = 143

 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 19/110 (17%)
 Frame = -1

Query: 455 KVVYISTPMKVTTSASTFRETVQELTGRESDVVRIMETCGGQDTW--------------- 321
           KVVYIS+PMKV TSAS FR  VQELTG++SD  R M+   G + +               
Sbjct: 23  KVVYISSPMKVETSASKFRALVQELTGKDSDAARFMDVNNGAENYSTETTPDRSRAASDE 82

Query: 320 ----LIPDHHNSNKGMITTSTERSSPSNTSADELVEPFNGVFVRGQETNF 183
               L+P   + N+   ++S +  S      D  + P  G F+   ++NF
Sbjct: 83  HGSVLLPLMSSYNEPSFSSSPDSDSSIFDPFDRFLPPMEGSFMSMFQSNF 132


>emb|CAN69541.1| hypothetical protein VITISV_025656 [Vitis vinifera]
          Length = 124

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 31/40 (77%), Positives = 33/40 (82%)
 Frame = -1

Query: 464 AAFKVVYISTPMKVTTSASTFRETVQELTGRESDVVRIME 345
           AA KVVYIS+PMKV TSAS FR  VQELTGR+SDV R ME
Sbjct: 10  AAVKVVYISSPMKVKTSASKFRALVQELTGRDSDVERYME 49


>ref|XP_004142385.1| PREDICTED: sigma factor binding protein 1, chloroplastic-like
           [Cucumis sativus] gi|449487122|ref|XP_004157503.1|
           PREDICTED: sigma factor binding protein 1,
           chloroplastic-like [Cucumis sativus]
          Length = 140

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 29/44 (65%), Positives = 33/44 (75%)
 Frame = -1

Query: 464 AAFKVVYISTPMKVTTSASTFRETVQELTGRESDVVRIMETCGG 333
           A FKVVYIS+PMKV TSAS FR  VQ+LTG++SD  R ME   G
Sbjct: 18  AGFKVVYISSPMKVKTSASKFRSLVQKLTGQDSDAERFMEMASG 61


>dbj|BAI52954.1| sigma factor binding protein 1 [Citrullus lanatus subsp. vulgaris]
          Length = 146

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 29/41 (70%), Positives = 32/41 (78%)
 Frame = -1

Query: 467 AAAFKVVYISTPMKVTTSASTFRETVQELTGRESDVVRIME 345
           AA FKVVYIS+PMKV TSAS FR  VQ LTG++SD  R ME
Sbjct: 17  AADFKVVYISSPMKVKTSASKFRSLVQRLTGQDSDAERFME 57


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