BLASTX nr result
ID: Achyranthes23_contig00012393
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00012393
(1002 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY22497.1| Uncharacterized protein isoform 1 [Theobroma cacao] 182 2e-43
ref|XP_002283991.1| PREDICTED: uncharacterized protein LOC100264... 174 4e-41
ref|XP_004244509.1| PREDICTED: mediator of RNA polymerase II tra... 171 5e-40
ref|XP_006357075.1| PREDICTED: mediator of RNA polymerase II tra... 164 5e-38
gb|AFK48728.1| unknown [Medicago truncatula] 159 2e-36
ref|XP_004501709.1| PREDICTED: mediator of RNA polymerase II tra... 158 4e-36
ref|XP_002511168.1| conserved hypothetical protein [Ricinus comm... 156 1e-35
ref|XP_003522437.2| PREDICTED: mediator of RNA polymerase II tra... 155 2e-35
gb|ESW09898.1| hypothetical protein PHAVU_009G165600g [Phaseolus... 155 2e-35
ref|XP_006436855.1| hypothetical protein CICLE_v10032864mg [Citr... 154 4e-35
ref|XP_002321708.2| hypothetical protein POPTR_0015s10970g [Popu... 154 4e-35
ref|XP_003526951.1| PREDICTED: mediator of RNA polymerase II tra... 152 2e-34
gb|EMJ24715.1| hypothetical protein PRUPE_ppa011908mg [Prunus pe... 152 3e-34
gb|EXB25243.1| hypothetical protein L484_010110 [Morus notabilis] 151 3e-34
ref|XP_004291322.1| PREDICTED: mediator of RNA polymerase II tra... 151 4e-34
ref|NP_568973.1| uncharacterized protein [Arabidopsis thaliana] ... 151 4e-34
ref|XP_002318134.1| hypothetical protein POPTR_0012s10100g [Popu... 151 4e-34
ref|XP_004138044.1| PREDICTED: mediator of RNA polymerase II tra... 150 1e-33
ref|XP_002864848.1| hypothetical protein ARALYDRAFT_496535 [Arab... 150 1e-33
gb|AAM62832.1| unknown [Arabidopsis thaliana] 149 2e-33
>gb|EOY22497.1| Uncharacterized protein isoform 1 [Theobroma cacao]
Length = 198
Score = 182 bits (462), Expect = 2e-43
Identities = 99/168 (58%), Positives = 119/168 (70%), Gaps = 12/168 (7%)
Frame = +3
Query: 3 DETVDAVYQILSAMNDELCNPAMWSTSPSPL--AVIPDTITANGITSNGHAGSSNGDMSS 176
+ET++A +QILS+MNDELCNPA+WST PS T TAN NG + SNGD +S
Sbjct: 31 EETIEAAFQILSSMNDELCNPALWSTIPSSSNSTTASSTTTANTAAPNGPSSLSNGDSAS 90
Query: 177 DSAQQFDMGG------GALEEARLRYKTSVASLRAVLNAMPQHPK----EDVSGSGSQED 326
D +MGG GAL+EARLRYK SVASLRAVL A+P K E S + S D
Sbjct: 91 DGGHHLEMGGIGGSGNGALDEARLRYKNSVASLRAVLAAIPNSQKAKAFETGSTASSPAD 150
Query: 327 EAEIEKLEEQVSNLRMDLANKNKHLKHLIDQIRDVITDISTWQSPCSV 470
EAEI+KLE+Q SNLR +LANKN++LK LIDQ+RD+ITDISTWQSPCS+
Sbjct: 151 EAEIDKLEDQASNLRKELANKNEYLKLLIDQLRDLITDISTWQSPCSI 198
>ref|XP_002283991.1| PREDICTED: uncharacterized protein LOC100264705 [Vitis vinifera]
gi|147789866|emb|CAN73869.1| hypothetical protein
VITISV_001275 [Vitis vinifera]
gi|297734439|emb|CBI15686.3| unnamed protein product
[Vitis vinifera]
Length = 174
Score = 174 bits (442), Expect = 4e-41
Identities = 94/164 (57%), Positives = 117/164 (71%), Gaps = 8/164 (4%)
Frame = +3
Query: 3 DETVDAVYQILSAMNDELCNPAMWSTSPSPLAVIPDTITANGITSNGHAGSSNGDMSSDS 182
+ET+++ +QILS+MNDELCNP +WST P P S+ + S NGD SSD
Sbjct: 21 EETIESAFQILSSMNDELCNPTLWSTPPPPATA----------ASSHSSASLNGDASSDF 70
Query: 183 AQQFDM-GGGALEEARLRYKTSVASLRAVLNAMPQHPKEDV-------SGSGSQEDEAEI 338
+ ++ GGGAL++ARLRYK+SVASLRAVLNA+ K SGS SQ D+AEI
Sbjct: 71 SHHMEIAGGGALDDARLRYKSSVASLRAVLNAIQSSQKAKAFEASSAASGSASQADQAEI 130
Query: 339 EKLEEQVSNLRMDLANKNKHLKHLIDQIRDVITDISTWQSPCSV 470
EKLEE+ SNLR +LA+KNK+LK LIDQ+RD+ITDISTWQSPCSV
Sbjct: 131 EKLEERASNLRKELADKNKYLKLLIDQLRDLITDISTWQSPCSV 174
>ref|XP_004244509.1| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like [Solanum lycopersicum]
Length = 198
Score = 171 bits (432), Expect = 5e-40
Identities = 90/173 (52%), Positives = 123/173 (71%), Gaps = 18/173 (10%)
Frame = +3
Query: 3 DETVDAVYQILSAMNDELCNPAMWST-----SPSPLAVIPDTITANGITSNGHAGSSNGD 167
++T++A +QILSAMNDELCNP++WST + S +AV + A+G+ SNG +NGD
Sbjct: 25 EDTIEAAHQILSAMNDELCNPSLWSTLNTAAASSAVAVAGGGVGASGVLSNGQQHHTNGD 84
Query: 168 MSSD-------SAQQFDMGGGALEEARLRYKTSVASLRAVLNAMPQHPKE------DVSG 308
+SSD SAQ D+GGGAL+E+RLRYK+S+ASLR+VL A+ K SG
Sbjct: 85 ISSDTSSSSSASAQHLDIGGGALDESRLRYKSSIASLRSVLTAISNSQKAKALEAASASG 144
Query: 309 SGSQEDEAEIEKLEEQVSNLRMDLANKNKHLKHLIDQIRDVITDISTWQSPCS 467
S S D+AEIE+LE++ S+L+ +L +KNKHLK LIDQ+RD++ D+ TWQSPCS
Sbjct: 145 SLSAADQAEIEQLEDRASSLKKELVDKNKHLKLLIDQLRDLLADLCTWQSPCS 197
>ref|XP_006357075.1| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like isoform X1 [Solanum tuberosum]
gi|565381437|ref|XP_006357076.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 30-like isoform
X2 [Solanum tuberosum]
Length = 198
Score = 164 bits (415), Expect = 5e-38
Identities = 87/173 (50%), Positives = 120/173 (69%), Gaps = 18/173 (10%)
Frame = +3
Query: 3 DETVDAVYQILSAMNDELCNPAMWST-----SPSPLAVIPDTITANGITSNGHAGSSNGD 167
++T++A +QILSAMNDELCNP++WST S + + + A+ + SNG +NGD
Sbjct: 25 EDTIEAAHQILSAMNDELCNPSLWSTLNTAASSASASAAGGGVGASAVLSNGQQLHTNGD 84
Query: 168 MSSD-------SAQQFDMGGGALEEARLRYKTSVASLRAVLNAMPQHPKE------DVSG 308
+SSD SAQ D+GGGAL+E+RLRYK+S+ASLR+VL A+ K SG
Sbjct: 85 ISSDTSSSSSASAQHLDIGGGALDESRLRYKSSIASLRSVLTAISNSQKAKALEAASASG 144
Query: 309 SGSQEDEAEIEKLEEQVSNLRMDLANKNKHLKHLIDQIRDVITDISTWQSPCS 467
S S D+AEIE+LE++ S+L+ +L +KNKHLK LIDQ+RD++ D+ TWQSPCS
Sbjct: 145 SLSAADQAEIEQLEDRASSLKKELVDKNKHLKLLIDQLRDLLADLCTWQSPCS 197
>gb|AFK48728.1| unknown [Medicago truncatula]
Length = 179
Score = 159 bits (401), Expect = 2e-36
Identities = 87/158 (55%), Positives = 105/158 (66%), Gaps = 3/158 (1%)
Frame = +3
Query: 3 DETVDAVYQILSAMNDELCNPAMWSTSPSPLAVIPDTITANGITSNGHAGSSNGDMSSDS 182
+ET+ ++ILS+MNDELCNP WSTSPS + N +SNG A S N +D
Sbjct: 27 EETIQHAFKILSSMNDELCNPVWWSTSPS------SATSPNAPSSNGDANSENSGQHADG 80
Query: 183 AQQFDMGGGALEEARLRYKTSVASLRAVLNAMPQHPKEDVSGSGSQE---DEAEIEKLEE 353
A GGAL EARLRYK +VA LR+VL A+P K + GS + DEAEIEKLEE
Sbjct: 81 AAPSGGAGGALGEARLRYKDAVAGLRSVLAAIPNSQKANTFDGGSADSPMDEAEIEKLEE 140
Query: 354 QVSNLRMDLANKNKHLKHLIDQIRDVITDISTWQSPCS 467
Q S+LR +L NKN HLK LIDQ+R++ITDISTWQSP S
Sbjct: 141 QASSLRKELGNKNLHLKILIDQLRELITDISTWQSPFS 178
>ref|XP_004501709.1| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like isoform X1 [Cicer arietinum]
gi|502133278|ref|XP_004501710.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 30-like isoform
X2 [Cicer arietinum]
Length = 183
Score = 158 bits (399), Expect = 4e-36
Identities = 85/158 (53%), Positives = 106/158 (67%), Gaps = 3/158 (1%)
Frame = +3
Query: 3 DETVDAVYQILSAMNDELCNPAMWSTSPSPLAVIPDTITANGITSNGHAGSSNGDMSSDS 182
+ET+ ++ILS+MNDELCNP +WSTSPS + N +SNG A S + +D
Sbjct: 31 EETIQYAFKILSSMNDELCNPVLWSTSPSAAT------SPNAPSSNGDANSDSSSQHADG 84
Query: 183 AQQFDMGGGALEEARLRYKTSVASLRAVLNAMPQHPKEDVSGSGSQE---DEAEIEKLEE 353
A GGALEEAR RYK +VA LR +L A+P K + SGS + DEAEIEKLEE
Sbjct: 85 AAPGGGAGGALEEARFRYKNAVAGLRTILAAIPNSQKVNTFDSGSADSPADEAEIEKLEE 144
Query: 354 QVSNLRMDLANKNKHLKHLIDQIRDVITDISTWQSPCS 467
+ S+LR +L NKN HLK LIDQ+R++ITDISTWQSP S
Sbjct: 145 RASSLRKELVNKNLHLKILIDQLRELITDISTWQSPFS 182
>ref|XP_002511168.1| conserved hypothetical protein [Ricinus communis]
gi|223550283|gb|EEF51770.1| conserved hypothetical
protein [Ricinus communis]
Length = 196
Score = 156 bits (395), Expect = 1e-35
Identities = 92/173 (53%), Positives = 112/173 (64%), Gaps = 17/173 (9%)
Frame = +3
Query: 3 DETVDAVYQILSAMNDELCNPAMWSTSPSP---LAVIPDTITANGITSNGHAGSSNGDMS 173
+ET+ A YQILS+MNDELCNP +WST+ S + I +N ++ NG NGD
Sbjct: 27 EETIQAAYQILSSMNDELCNPTLWSTTSSSNNTTSPISAPANSNSLSQNGVV---NGDSV 83
Query: 174 SDS--AQQFD----------MGGGALEEARLRYKTSVASLRAVLNAMPQHPK--EDVSGS 311
SD+ A FD G GAL+EAR RYK SVA+LR VL A+P K + S
Sbjct: 84 SDAVVAHHFDGTGTGVVGGGTGNGALDEARFRYKNSVAALREVLAAIPNSHKAISFETSS 143
Query: 312 GSQEDEAEIEKLEEQVSNLRMDLANKNKHLKHLIDQIRDVITDISTWQSPCSV 470
S DEA++EKLEEQ SNLR +L NKN +LK LIDQ+RD+ITDISTWQSPCSV
Sbjct: 144 SSPADEADVEKLEEQASNLRKELFNKNAYLKLLIDQLRDLITDISTWQSPCSV 196
>ref|XP_003522437.2| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like [Glycine max]
Length = 174
Score = 155 bits (392), Expect = 2e-35
Identities = 83/158 (52%), Positives = 105/158 (66%), Gaps = 3/158 (1%)
Frame = +3
Query: 3 DETVDAVYQILSAMNDELCNPAMWSTSPSPLAVIPDTITANGITSNGHAGSSNGDMSSDS 182
+ET++ +QILS+MNDELCNP +WSTSPS + N A S N + +D+
Sbjct: 29 EETIENAFQILSSMNDELCNPVLWSTSPST-------------SPNADATSDNSNHHADA 75
Query: 183 AQQFDMGGGALEEARLRYKTSVASLRAVLNAMPQHPKE---DVSGSGSQEDEAEIEKLEE 353
+ GGALEEAR RYK +V +LR +L A+P KE D + S DEAEI+KLEE
Sbjct: 76 SAASAAAGGALEEARARYKKAVTALRTILTAIPTSQKEKTFDAGSAASPADEAEIDKLEE 135
Query: 354 QVSNLRMDLANKNKHLKHLIDQIRDVITDISTWQSPCS 467
+ S+LR +LANKN HLK LIDQ+RD+ITDISTWQSP S
Sbjct: 136 RASSLRRELANKNLHLKTLIDQLRDLITDISTWQSPFS 173
>gb|ESW09898.1| hypothetical protein PHAVU_009G165600g [Phaseolus vulgaris]
Length = 181
Score = 155 bits (392), Expect = 2e-35
Identities = 84/158 (53%), Positives = 107/158 (67%), Gaps = 3/158 (1%)
Frame = +3
Query: 3 DETVDAVYQILSAMNDELCNPAMWSTSPSPLAVIPDTITANGITSNGHAGSSNGDMSSDS 182
+ET++ +QILS+MNDELCNP +WSTSPS + P N ++ + S N ++ SDS
Sbjct: 28 EETIEFAFQILSSMNDELCNPVLWSTSPSATSASP-----NAPSATADSTSDNSNLHSDS 82
Query: 183 AQQFDMGGGALEEARLRYKTSVASLRAVLNAMPQHPKE---DVSGSGSQEDEAEIEKLEE 353
A GGALEEARLRYK +VA+LR +L A+P K D + S DEAEI KL+E
Sbjct: 83 ATVSAGAGGALEEARLRYKNAVAALRTILTAIPNSQKSKTFDTGSAASTADEAEIVKLQE 142
Query: 354 QVSNLRMDLANKNKHLKHLIDQIRDVITDISTWQSPCS 467
+ S+LR +LANKN LK LIDQ+R +ITDISTWQSP S
Sbjct: 143 RASSLRRELANKNLLLKTLIDQLRGLITDISTWQSPFS 180
>ref|XP_006436855.1| hypothetical protein CICLE_v10032864mg [Citrus clementina]
gi|568880628|ref|XP_006493212.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 30-like [Citrus
sinensis] gi|557539051|gb|ESR50095.1| hypothetical
protein CICLE_v10032864mg [Citrus clementina]
Length = 183
Score = 154 bits (390), Expect = 4e-35
Identities = 89/163 (54%), Positives = 112/163 (68%), Gaps = 7/163 (4%)
Frame = +3
Query: 3 DETVDAVYQILSAMNDELCNPAMWSTSPSPLAVIPDTITANGITSNGHAGSSNGDMSSDS 182
+ET++A +QILS+MNDELCNP +WST+ + T T+NG+ HA S++ +
Sbjct: 29 EETIEAAFQILSSMNDELCNPTLWSTTTTTT-----TSTSNGVV---HADSTSDANNHHL 80
Query: 183 AQQFDMGGGALEEARLRYKTSVASLRAVLNAMPQHPK----EDVSG---SGSQEDEAEIE 341
G AL+EAR RYKTSVA+LRAVL A+P K E VS S S+ DE EI+
Sbjct: 81 DSSGGSGNSALDEARHRYKTSVAALRAVLTAIPNSHKAKSFEMVSSPVDSVSRSDEVEID 140
Query: 342 KLEEQVSNLRMDLANKNKHLKHLIDQIRDVITDISTWQSPCSV 470
KLEE+ S LR +LANKNK+LK LIDQ+RD+ITDISTWQSPCSV
Sbjct: 141 KLEERASLLRKELANKNKYLKRLIDQLRDLITDISTWQSPCSV 183
>ref|XP_002321708.2| hypothetical protein POPTR_0015s10970g [Populus trichocarpa]
gi|550322461|gb|EEF05835.2| hypothetical protein
POPTR_0015s10970g [Populus trichocarpa]
Length = 194
Score = 154 bits (390), Expect = 4e-35
Identities = 83/164 (50%), Positives = 109/164 (66%), Gaps = 8/164 (4%)
Frame = +3
Query: 3 DETVDAVYQILSAMNDELCNPAMWSTSPSPLAVIPDTITANGITSNGHAGSSNGDMS--- 173
+ET+ A YQILS+MNDELCNP +WST+ + + IT+ + + NGD +
Sbjct: 31 EETIQAGYQILSSMNDELCNPTLWSTTSTATTAVTSPITSKNAQNGAVVITVNGDANAAV 90
Query: 174 SDSAQQFDMGGG-----ALEEARLRYKTSVASLRAVLNAMPQHPKEDVSGSGSQEDEAEI 338
SDS + GGG AL+EAR RYK SVA+LR VL A+P K + S DEAEI
Sbjct: 91 SDSTHELSGGGGGVGNGALDEARFRYKNSVAALRDVLAAIPNSHKAKPFETSSPADEAEI 150
Query: 339 EKLEEQVSNLRMDLANKNKHLKHLIDQIRDVITDISTWQSPCSV 470
+KLEE+ S+LR +LA KN ++K LIDQ+R++ITDISTWQ+PCSV
Sbjct: 151 KKLEERASSLRKELAKKNTYVKLLIDQLREIITDISTWQTPCSV 194
>ref|XP_003526951.1| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like isoform X1 [Glycine max]
Length = 168
Score = 152 bits (385), Expect = 2e-34
Identities = 82/158 (51%), Positives = 106/158 (67%), Gaps = 3/158 (1%)
Frame = +3
Query: 3 DETVDAVYQILSAMNDELCNPAMWSTSPSPLAVIPDTITANGITSNGHAGSSNGDMSSDS 182
+ET++ +QILS+MNDELCNP +WSTSPS + + N A S N + +D+
Sbjct: 21 EETIENAFQILSSMNDELCNPVLWSTSPSASS-----------SPNADATSENSNHHADA 69
Query: 183 AQQFDMGGGALEEARLRYKTSVASLRAVLNAMPQHPKEDV---SGSGSQEDEAEIEKLEE 353
GGGALE+AR RYK +VA+LR +L A+P K + S + S DEAEI+KLEE
Sbjct: 70 TTAAAGGGGALEQARSRYKKAVAALRTILTAIPNSQKANAFNASSAASPADEAEIDKLEE 129
Query: 354 QVSNLRMDLANKNKHLKHLIDQIRDVITDISTWQSPCS 467
+ S+LR +LANKN HLK LIDQ+RD+ITDISTW SP S
Sbjct: 130 RASSLRRELANKNLHLKTLIDQLRDLITDISTWHSPFS 167
>gb|EMJ24715.1| hypothetical protein PRUPE_ppa011908mg [Prunus persica]
Length = 191
Score = 152 bits (383), Expect = 3e-34
Identities = 90/172 (52%), Positives = 109/172 (63%), Gaps = 16/172 (9%)
Frame = +3
Query: 3 DETVDAVYQILSAMNDELCNPAMWSTSPSPLAVIPDTITANGITSNGHAGSSNGDMSSDS 182
+ET++A +QILS+MNDELCNP +WST+ S A T ANG + + G +NGD SS
Sbjct: 24 EETIEAAFQILSSMNDELCNPTLWSTTSSFSAA---TNIANGPAPHAN-GVNNGDSSSSD 79
Query: 183 AQQFDMG----------GGALEEARLRYKTSVASLRAVLNAMPQHPK------EDVSGSG 314
G GGALEEAR RY SV LRAVL +P K V S
Sbjct: 80 NTSTHHGDLIGAGGSGTGGALEEARHRYTNSVRLLRAVLTTIPNSQKAPSETSSTVVSSE 139
Query: 315 SQEDEAEIEKLEEQVSNLRMDLANKNKHLKHLIDQIRDVITDISTWQSPCSV 470
S DEAEIEKL+E+ SNLR +LANKN ++K LIDQ+RD+ITDISTWQSPCS+
Sbjct: 140 SPADEAEIEKLDERASNLRKELANKNLYIKFLIDQLRDLITDISTWQSPCSI 191
>gb|EXB25243.1| hypothetical protein L484_010110 [Morus notabilis]
Length = 200
Score = 151 bits (382), Expect = 3e-34
Identities = 88/173 (50%), Positives = 116/173 (67%), Gaps = 17/173 (9%)
Frame = +3
Query: 3 DETVDAVYQILSAMNDELCNPAMWSTSPSPLAVIPDTI---TANGITSNGHAGSSNGDMS 173
++T+++ +QILS+MNDELCNPA+WST+ + A + ANG +S+ + G NGD +
Sbjct: 29 EDTIESAFQILSSMNDELCNPALWSTTTTVAAATSSSSPSSAANGPSSHSN-GLVNGDAA 87
Query: 174 -SDSAQQFDMGGG------ALEEARLRYKTSVASLRAVLNAMPQHPKEDVSGSGSQE--- 323
SDS D+GGG AL EA+ RYK +VASLRA+L A+P + +G+
Sbjct: 88 ASDSHHHADLGGGGGAAGGALGEAQFRYKNAVASLRAILAAIPNSQRGRTFETGTTPTSS 147
Query: 324 ----DEAEIEKLEEQVSNLRMDLANKNKHLKHLIDQIRDVITDISTWQSPCSV 470
E EIEKLEE+ SNLR +LANKN +LK LIDQ+RD+ITDISTWQSPCSV
Sbjct: 148 VTPAQEVEIEKLEERASNLRTELANKNAYLKILIDQLRDLITDISTWQSPCSV 200
>ref|XP_004291322.1| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like [Fragaria vesca subsp. vesca]
Length = 179
Score = 151 bits (381), Expect = 4e-34
Identities = 84/166 (50%), Positives = 105/166 (63%), Gaps = 10/166 (6%)
Frame = +3
Query: 3 DETVDAVYQILSAMNDELCNPAMWSTSPSPLAVIPDTITANGITSNGHAGSSNGDMSSDS 182
+ET+ + +QILS+MNDELCNP +W T S + NGH+ SNG + SDS
Sbjct: 28 EETIQSAFQILSSMNDELCNPLLWPTDSSAVG-------------NGHSSLSNGVVHSDS 74
Query: 183 AQQFDMG----------GGALEEARLRYKTSVASLRAVLNAMPQHPKEDVSGSGSQEDEA 332
+ + GGALEEAR RYK SV +LRAVL A+P KE S +GS DE
Sbjct: 75 SSSENTNTQNHGDSSGAGGALEEARFRYKNSVTALRAVLAAIPDSHKE-ASETGSPADET 133
Query: 333 EIEKLEEQVSNLRMDLANKNKHLKHLIDQIRDVITDISTWQSPCSV 470
E+EKLE + SNLR +L KN ++K LIDQ+ D+ITDISTWQSPCSV
Sbjct: 134 EVEKLERRASNLRKELVKKNAYIKVLIDQLCDLITDISTWQSPCSV 179
>ref|NP_568973.1| uncharacterized protein [Arabidopsis thaliana]
gi|75171739|sp|Q9FMV4.1|MED30_ARATH RecName:
Full=Mediator of RNA polymerase II transcription subunit
30 gi|9758289|dbj|BAB08813.1| unnamed protein product
[Arabidopsis thaliana] gi|190886513|gb|ACE95179.1|
At1g17730 [Arabidopsis thaliana]
gi|332010374|gb|AED97757.1| uncharacterized protein
AT5G63480 [Arabidopsis thaliana]
Length = 189
Score = 151 bits (381), Expect = 4e-34
Identities = 82/164 (50%), Positives = 107/164 (65%), Gaps = 8/164 (4%)
Frame = +3
Query: 3 DETVDAVYQILSAMNDELCNPAMWSTSPSPLAVIPDTITANGITSNGHAGSSNGDMSSDS 182
+ET++A +QI+SAMNDELCNP++WSTS +P + T + + A + +G
Sbjct: 26 EETIEAAFQIISAMNDELCNPSLWSTSATPSSAATTTGSNGSALVSADAAAIDGTSHHSE 85
Query: 183 AQQFDMGGGA----LEEARLRYKTSVASLRAVLNAMPQHPKEDVS----GSGSQEDEAEI 338
+ GGG+ L+EA LRYK SV SLRAVL A+P K S G GS E E EI
Sbjct: 86 SAGGGGGGGSGNSVLDEASLRYKNSVTSLRAVLAAIPNSQKAKASEMQNGLGSPESEDEI 145
Query: 339 EKLEEQVSNLRMDLANKNKHLKHLIDQIRDVITDISTWQSPCSV 470
EKLEEQ +LRM++A KN H+K LID++R++I DISTWQSPCSV
Sbjct: 146 EKLEEQALSLRMEIAKKNVHVKELIDKLRELIADISTWQSPCSV 189
>ref|XP_002318134.1| hypothetical protein POPTR_0012s10100g [Populus trichocarpa]
gi|118486707|gb|ABK95190.1| unknown [Populus
trichocarpa] gi|222858807|gb|EEE96354.1| hypothetical
protein POPTR_0012s10100g [Populus trichocarpa]
Length = 185
Score = 151 bits (381), Expect = 4e-34
Identities = 79/156 (50%), Positives = 106/156 (67%)
Frame = +3
Query: 3 DETVDAVYQILSAMNDELCNPAMWSTSPSPLAVIPDTITANGITSNGHAGSSNGDMSSDS 182
+ET+ A YQILS+MNDELCNP +WST+ + + + IT++ NG A ++ D + +
Sbjct: 31 EETIQAAYQILSSMNDELCNPTLWSTTSTSTSTVTSPITSSN-AQNGDANAAVSDSTLEL 89
Query: 183 AQQFDMGGGALEEARLRYKTSVASLRAVLNAMPQHPKEDVSGSGSQEDEAEIEKLEEQVS 362
+G GAL+EAR RYK SVA+LR VL A+P K + S D+AEIEKLEE+ S
Sbjct: 90 NGGGGVGNGALDEARFRYKNSVAALRDVLAAIPNSHKAKPFETSSPADQAEIEKLEERAS 149
Query: 363 NLRMDLANKNKHLKHLIDQIRDVITDISTWQSPCSV 470
NLR +LA KN ++K LIDQ+R++I DISTWQ P SV
Sbjct: 150 NLRKELAKKNTYVKLLIDQLRELIADISTWQGPYSV 185
>ref|XP_004138044.1| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like [Cucumis sativus]
gi|449532651|ref|XP_004173294.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 30-like [Cucumis
sativus]
Length = 198
Score = 150 bits (378), Expect = 1e-33
Identities = 81/172 (47%), Positives = 109/172 (63%), Gaps = 16/172 (9%)
Frame = +3
Query: 3 DETVDAVYQILSAMNDELCNPAMWSTSPSPLAVIPDTITA---NGITSNGHAGSSNGDMS 173
+ET+++ +QIL +MNDELCNP +WST+ S +T +G +S+ G NGD S
Sbjct: 27 EETIESAFQILYSMNDELCNPTLWSTTSSTATTATSGLTIASPSGPSSHSANGVVNGDAS 86
Query: 174 SDSAQQF--------DMGGGALEEARLRYKTSVASLRAVLNAMPQHPK-----EDVSGSG 314
S+S GGALEEAR+RYK SV +LRA+L A+P K SG
Sbjct: 87 SESTSHHTDSSGGGGSGSGGALEEARVRYKNSVLALRAILAAIPNSQKAKAYESGTSGHA 146
Query: 315 SQEDEAEIEKLEEQVSNLRMDLANKNKHLKHLIDQIRDVITDISTWQSPCSV 470
S D++EI+KLE+ +SNLR +L KN H+K LIDQ+RD++ D+STWQSPCSV
Sbjct: 147 SPADQSEIDKLEQHLSNLRKELVVKNLHIKLLIDQLRDLVADVSTWQSPCSV 198
>ref|XP_002864848.1| hypothetical protein ARALYDRAFT_496535 [Arabidopsis lyrata subsp.
lyrata] gi|297310683|gb|EFH41107.1| hypothetical protein
ARALYDRAFT_496535 [Arabidopsis lyrata subsp. lyrata]
Length = 178
Score = 150 bits (378), Expect = 1e-33
Identities = 87/170 (51%), Positives = 108/170 (63%), Gaps = 14/170 (8%)
Frame = +3
Query: 3 DETVDAVYQILSAMNDELCNPAMWSTSPSPLAVIPDTITANGITSNGHA----------G 152
+ET++A +QI+SAMNDELCNP++WSTS +P + TA G SNG A G
Sbjct: 15 EETIEAAFQIISAMNDELCNPSLWSTSATPSSAA----TATG--SNGSALVSVDAAAIDG 68
Query: 153 SSNGDMSSDSAQQFDMGGGALEEARLRYKTSVASLRAVLNAMPQHPKEDVS----GSGSQ 320
+S+ S G L+EA LRYK SV SLRAVL A+P K S G GS
Sbjct: 69 TSHHSESGGGGGGGGSGNSVLDEASLRYKNSVTSLRAVLAAIPNSHKAKASEMENGFGSP 128
Query: 321 EDEAEIEKLEEQVSNLRMDLANKNKHLKHLIDQIRDVITDISTWQSPCSV 470
E E EIEKLEEQ +LRM++A KN H+K LID++R++I DISTWQSPCSV
Sbjct: 129 ESEDEIEKLEEQALSLRMEIAKKNVHVKELIDKLRELIADISTWQSPCSV 178
>gb|AAM62832.1| unknown [Arabidopsis thaliana]
Length = 178
Score = 149 bits (376), Expect = 2e-33
Identities = 81/164 (49%), Positives = 107/164 (65%), Gaps = 8/164 (4%)
Frame = +3
Query: 3 DETVDAVYQILSAMNDELCNPAMWSTSPSPLAVIPDTITANGITSNGHAGSSNGDMSSDS 182
+ET++A +QI+SAMNDELCNP++WSTS +P + T + + A + +G
Sbjct: 15 EETIEAAFQIISAMNDELCNPSLWSTSATPSSAATTTGSNGSALVSADAAAIDGTSHHSE 74
Query: 183 AQQFDMGGGA----LEEARLRYKTSVASLRAVLNAMPQHPKEDVS----GSGSQEDEAEI 338
+ GGG+ L+EA LRYK SV SLRAVL A+P K S G GS E E EI
Sbjct: 75 SAGGGGGGGSGNSVLDEASLRYKNSVTSLRAVLAAIPNSQKAKASEMQNGLGSPEREDEI 134
Query: 339 EKLEEQVSNLRMDLANKNKHLKHLIDQIRDVITDISTWQSPCSV 470
EKLEE+ +LRM++A KN H+K LID++R++I DISTWQSPCSV
Sbjct: 135 EKLEEEALSLRMEIAKKNVHVKELIDKLRELIADISTWQSPCSV 178