BLASTX nr result
ID: Achyranthes23_contig00012148
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00012148
(1182 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277373.1| PREDICTED: uncharacterized protein LOC100264... 255 2e-65
gb|EXB58395.1| putative DNA-directed RNA polymerase I subunit RP... 238 5e-60
ref|XP_002510510.1| conserved hypothetical protein [Ricinus comm... 236 1e-59
ref|XP_006435147.1| hypothetical protein CICLE_v10002352mg [Citr... 236 2e-59
ref|XP_004492890.1| PREDICTED: DNA-directed RNA polymerase I sub... 235 2e-59
ref|XP_006473630.1| PREDICTED: DNA-directed RNA polymerase I sub... 233 9e-59
gb|EOY14977.1| DNA-directed RNA polymerases, putative isoform 1 ... 233 1e-58
ref|NP_001236705.1| uncharacterized protein LOC100527229 [Glycin... 228 4e-57
gb|AGV54225.1| DNA-directed RNA polymerase I subunit rpa43-like ... 227 6e-57
ref|XP_003534490.1| PREDICTED: DNA-directed RNA polymerase I sub... 226 1e-56
ref|XP_002306915.2| hypothetical protein POPTR_0005s25810g [Popu... 224 5e-56
ref|XP_004147835.1| PREDICTED: DNA-directed RNA polymerase I sub... 222 2e-55
ref|XP_006302682.1| hypothetical protein CARUB_v10020789mg, part... 217 6e-54
ref|XP_002889036.1| hypothetical protein ARALYDRAFT_316494 [Arab... 216 1e-53
ref|XP_006390285.1| hypothetical protein EUTSA_v10019169mg [Eutr... 216 1e-53
ref|NP_565115.1| DNA-directed RNA polymerase [Arabidopsis thalia... 215 3e-53
gb|AAK93576.1| unknown protein [Arabidopsis thaliana] 213 9e-53
ref|XP_002301988.2| hypothetical protein POPTR_0002s02620g [Popu... 213 2e-52
ref|XP_004239824.1| PREDICTED: uncharacterized protein LOC101248... 213 2e-52
ref|XP_006365851.1| PREDICTED: uncharacterized protein LOC102591... 211 5e-52
>ref|XP_002277373.1| PREDICTED: uncharacterized protein LOC100264366 [Vitis vinifera]
gi|302142630|emb|CBI19833.3| unnamed protein product
[Vitis vinifera]
Length = 233
Score = 255 bits (652), Expect = 2e-65
Identities = 139/234 (59%), Positives = 172/234 (73%), Gaps = 4/234 (1%)
Frame = +1
Query: 166 MEALKVSKANLVVYLHPSKTSVVAQSVKQELSTLLFKFNETFDGVLLAYEVVDVPSKHGK 345
ME L+VS ANL+VY+HPSK + V+Q++ +ELS+LLFKFNE FDGV+LAY+V D+PSK K
Sbjct: 1 MEGLRVSDANLIVYVHPSKANRVSQAILRELSSLLFKFNEIFDGVVLAYDV-DIPSKDAK 59
Query: 346 VLSGLYPYVGVKLTANLLLFAPKPDTFMEGKVVKLTEESIHIVVLGFSAAIITAEDIRDE 525
+L G++PY GV+L A LLLF+PKP+ +EGKVVKL +ESIHIVVLGFS+AIIT E+IR E
Sbjct: 60 ILPGIHPYFGVRLKAKLLLFSPKPNMLIEGKVVKLAQESIHIVVLGFSSAIITDEEIRGE 119
Query: 526 FKFKIKSGKNVYQSRSHKKHNIKVGTMIRFVVKSFDEEILHISGSLGSLCTGNISWLTKH 705
FK+KIK G+ V+ SRSHK+H IKVGTMIRF+VKS DEEILHISGSL TG+I WL K
Sbjct: 120 FKYKIKHGEAVFVSRSHKRHVIKVGTMIRFLVKSLDEEILHISGSLNPPHTGSILWLDKK 179
Query: 706 LPEAPAGDXXXXXXXXXXXXFST---GTVDGGALSND-YHVLKKSKKQRIHQGS 855
L +A TVDGG S D H +KKSKK++I + S
Sbjct: 180 LEDASPSSRSTKKRRENGESREMQEHDTVDGGVFSLDNSHHIKKSKKRKISEES 233
>gb|EXB58395.1| putative DNA-directed RNA polymerase I subunit RPA43 [Morus
notabilis]
Length = 234
Score = 238 bits (606), Expect = 5e-60
Identities = 126/229 (55%), Positives = 164/229 (71%), Gaps = 4/229 (1%)
Frame = +1
Query: 166 MEALKVSKANLVVYLHPSKTSVVAQSVKQELSTLLFKFNETFDGVLLAYEVVDVPSKHGK 345
ME LKVS+A +VVY+HPSK++ + +V +ELS+LLFKF+E FDGV+LAYE D+ K K
Sbjct: 1 MECLKVSEAKMVVYVHPSKSTKIYDAVLRELSSLLFKFDENFDGVVLAYEF-DILDKSAK 59
Query: 346 VLSGLYPYVGVKLTANLLLFAPKPDTFMEGKVVKLTEESIHIVVLGFSAAIITAEDIRDE 525
+LSG++PY+GV++ A LLLF+PKPD +EG+VVK+T+ SIH++VLGF++A+IT E+IRDE
Sbjct: 60 ILSGIHPYIGVRIKAKLLLFSPKPDMLLEGRVVKVTQGSIHVIVLGFASAVITEEEIRDE 119
Query: 526 FKFKIKSGKNVYQSRSHKKHNIKVGTMIRFVVKSFDEEILHISGSLGSLCTGNISWLTKH 705
F +KIK + V+ S+ HK H IKVGTMIRF+VKS DEEILHISGSL TG I WL KH
Sbjct: 120 FVYKIKHEEEVFSSKFHKHHTIKVGTMIRFLVKSLDEEILHISGSLIPAHTGCIRWLAKH 179
Query: 706 LPE---APAGDXXXXXXXXXXXXFSTGTVDGGALS-NDYHVLKKSKKQR 840
L + GTV G ALS N H +KKSKK++
Sbjct: 180 LDDDTITGRSKKKRRENEEESILQDHGTVSGEALSFNSDHRIKKSKKEK 228
>ref|XP_002510510.1| conserved hypothetical protein [Ricinus communis]
gi|223551211|gb|EEF52697.1| conserved hypothetical
protein [Ricinus communis]
Length = 229
Score = 236 bits (603), Expect = 1e-59
Identities = 126/228 (55%), Positives = 161/228 (70%), Gaps = 3/228 (1%)
Frame = +1
Query: 166 MEALKVSKANLVVYLHPSKTSVVAQSVKQELSTLLFKFNETFDGVLLAYEVVDVPSKHGK 345
ME L +S+ANLVVY+HPS++ V+Q++ +ELS+LLFKFNE FDGV+LAY + P K +
Sbjct: 1 MEGLSISEANLVVYVHPSQSKNVSQAILRELSSLLFKFNENFDGVVLAY-AFNAPDKQAR 59
Query: 346 VLSGLYPYVGVKLTANLLLFAPKPDTFMEGKVVKLTEESIHIVVLGFSAAIITAEDIRDE 525
+L G++PY GV+L A +L+F+PKPD +EGKVVK+T ESIH++VLGFS+AIIT EDIRDE
Sbjct: 60 ILCGVHPYFGVRLQATMLVFSPKPDMLLEGKVVKVTRESIHVIVLGFSSAIITDEDIRDE 119
Query: 526 FKFKIKSGKNVYQSRSHKKHNIKVGTMIRFVVKSFDEEILHISGSLGSLCTGNISWLTKH 705
F++K K G+ +Y SR HK+H IKVGTMIRFVVKS DEE LHISGSL TG+ISWL
Sbjct: 120 FRYKRKHGEALYVSRPHKQHVIKVGTMIRFVVKSLDEETLHISGSLVPTHTGSISWLEGD 179
Query: 706 LPE--APAGDXXXXXXXXXXXXFSTGTVDGGALS-NDYHVLKKSKKQR 840
+ +G+ GT G S N H +KKSKK R
Sbjct: 180 MKNTTTDSGNKKRTQLDGEIEVQEEGTAGGDTYSVNGDHEIKKSKKLR 227
>ref|XP_006435147.1| hypothetical protein CICLE_v10002352mg [Citrus clementina]
gi|557537269|gb|ESR48387.1| hypothetical protein
CICLE_v10002352mg [Citrus clementina]
Length = 233
Score = 236 bits (601), Expect = 2e-59
Identities = 128/230 (55%), Positives = 166/230 (72%), Gaps = 5/230 (2%)
Frame = +1
Query: 166 MEALKVSKANLVVYLHPSKTSVVAQSVKQELSTLLFKFNETFDGVLLAYEVVDVPSKHGK 345
ME LKVS A++ VYLHPSK+ V+Q++ +ELS+LLFKFNE F+GVLLAY+V ++ K+GK
Sbjct: 1 MEGLKVSDADMEVYLHPSKSKKVSQAILRELSSLLFKFNEIFEGVLLAYDV-NILDKNGK 59
Query: 346 VLSGLYPYVGVKLTANLLLFAPKPDTFMEGKVVKLTEESIHIVVLGFSAAIITAEDIRDE 525
+L G++PY GVKL A LLLF+PKP+ +EGKVV+LT+ SIH++VLGFS+AIIT +DIR+E
Sbjct: 60 ILFGIHPYFGVKLKAKLLLFSPKPNMLVEGKVVRLTQASIHVIVLGFSSAIITDQDIREE 119
Query: 526 FKFKIKSGKNVYQSRSHKKHNIKVGTMIRFVVKSFDEEILHISGSLGSLCTGNISWLTKH 705
F + K G+ V+ SRSHK+H IKVGTMIRF+VKSFDEEILHISGSL TG+I WL K
Sbjct: 120 FNYTTKYGEEVFASRSHKRHVIKVGTMIRFLVKSFDEEILHISGSLKPAHTGSIRWLDKK 179
Query: 706 -----LPEAPAGDXXXXXXXXXXXXFSTGTVDGGALSNDYHVLKKSKKQR 840
L ++ T ++SND H +KKSKK+R
Sbjct: 180 SKNVCLADSSTTKRREVEGKSEMQDNETVGAAVSSVSND-HQIKKSKKRR 228
>ref|XP_004492890.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like [Cicer
arietinum]
Length = 232
Score = 235 bits (600), Expect = 2e-59
Identities = 128/233 (54%), Positives = 162/233 (69%), Gaps = 3/233 (1%)
Frame = +1
Query: 166 MEALKVSKANLVVYLHPSKTSVVAQSVKQELSTLLFKFNETFDGVLLAYEVVDVPSKHGK 345
ME LKVSKANLVVY+HPSK+ V+ +V +ELS++LF +NE FDG++LAY+V K +
Sbjct: 1 MEGLKVSKANLVVYIHPSKSRQVSNAVLRELSSMLFAYNEIFDGIVLAYDVNSF-DKCAR 59
Query: 346 VLSGLYPYVGVKLTANLLLFAPKPDTFMEGKVVKLTEESIHIVVLGFSAAIITAEDIRDE 525
+L G+YPY GVKL N+LLF+PKPD +EGKVVKLT ESIH+VVLGF++A+IT +DIR E
Sbjct: 60 ILPGIYPYFGVKLKVNMLLFSPKPDMLLEGKVVKLTHESIHVVVLGFASAVITEKDIRKE 119
Query: 526 FKFKIKSGKNVYQSRSHKKHNIKVGTMIRFVVKSFDEEILHISGSLGSLCTGNISWLTKH 705
F ++ K G++VY S+SHK+H IKVGTMIRF VKSFDEEILHI GSL TG+I WL K+
Sbjct: 120 FVYRTKHGQDVYASKSHKRHVIKVGTMIRFSVKSFDEEILHIYGSLVPDNTGSIHWLDKN 179
Query: 706 LPEAPAGDXXXXXXXXXXXXFST--GTVDGGALSND-YHVLKKSKKQRIHQGS 855
L D + +DG S D LK SKKQ++ Q S
Sbjct: 180 LEVVSLSDRSTKKRENEGQPLMSEKDAIDGEPSSFDTVQKLKHSKKQKVRQES 232
>ref|XP_006473630.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like isoform
X1 [Citrus sinensis]
Length = 233
Score = 233 bits (595), Expect = 9e-59
Identities = 128/230 (55%), Positives = 165/230 (71%), Gaps = 5/230 (2%)
Frame = +1
Query: 166 MEALKVSKANLVVYLHPSKTSVVAQSVKQELSTLLFKFNETFDGVLLAYEVVDVPSKHGK 345
ME LKVS A++ VYLHPSK+ V+Q++ +ELS+LLFKFNE F+GVLLAY+V ++ K+GK
Sbjct: 1 MEGLKVSDADMEVYLHPSKSKKVSQAILRELSSLLFKFNEIFEGVLLAYDV-NILDKNGK 59
Query: 346 VLSGLYPYVGVKLTANLLLFAPKPDTFMEGKVVKLTEESIHIVVLGFSAAIITAEDIRDE 525
+L G++PY GVKL A LLLF+PKP+ +EGKVV+LT+ SIH++VLGFS+AIIT +DIR+E
Sbjct: 60 ILCGIHPYFGVKLKAKLLLFSPKPNMLVEGKVVRLTQASIHVIVLGFSSAIITDQDIREE 119
Query: 526 FKFKIKSGKNVYQSRSHKKHNIKVGTMIRFVVKSFDEEILHISGSLGSLCTGNISWLTKH 705
F + K G+ V+ SRSHK H IKVGTMIRF+VKSFDEEILHISGSL TG+I WL K
Sbjct: 120 FNYTTKYGEEVFASRSHKWHVIKVGTMIRFLVKSFDEEILHISGSLIPARTGSIRWLDKK 179
Query: 706 -----LPEAPAGDXXXXXXXXXXXXFSTGTVDGGALSNDYHVLKKSKKQR 840
L ++ T ++SND H +KKSKK+R
Sbjct: 180 SKNVCLADSSTTKRREVEGKSEMQDNETVGAAVSSVSND-HQIKKSKKRR 228
>gb|EOY14977.1| DNA-directed RNA polymerases, putative isoform 1 [Theobroma cacao]
Length = 243
Score = 233 bits (594), Expect = 1e-58
Identities = 125/226 (55%), Positives = 163/226 (72%)
Frame = +1
Query: 166 MEALKVSKANLVVYLHPSKTSVVAQSVKQELSTLLFKFNETFDGVLLAYEVVDVPSKHGK 345
M+ L V+ A+LVVY+HPSK+ V+Q++ +ELS+LLFKFNE FDGVLLAY+V ++ K K
Sbjct: 17 MKGLSVADADLVVYVHPSKSRKVSQAILRELSSLLFKFNEAFDGVLLAYDV-NIQDKQAK 75
Query: 346 VLSGLYPYVGVKLTANLLLFAPKPDTFMEGKVVKLTEESIHIVVLGFSAAIITAEDIRDE 525
+LSG++PY G++L ANLLLF+PK D +EGKVVKL++ESIH+++LGFS+AIITA++IR E
Sbjct: 76 ILSGVHPYFGLRLKANLLLFSPKSDMLLEGKVVKLSQESIHVIILGFSSAIITAQNIRGE 135
Query: 526 FKFKIKSGKNVYQSRSHKKHNIKVGTMIRFVVKSFDEEILHISGSLGSLCTGNISWLTKH 705
FK+K K + ++ SRSHK+H IKVGTMIRF+VKSFDEEILHI GSL TG+I WL +
Sbjct: 136 FKYKTKDEEELFASRSHKRHVIKVGTMIRFLVKSFDEEILHIIGSLMPAHTGSICWLDWN 195
Query: 706 LPEAPAGDXXXXXXXXXXXXFSTGTVDGGALSNDYHVLKKSKKQRI 843
L E D LS + H+ KKSKK RI
Sbjct: 196 LEEISEFDRSATKSRGREWQEDKTFEGTTPLSYNNHI-KKSKKHRI 240
>ref|NP_001236705.1| uncharacterized protein LOC100527229 [Glycine max]
gi|571541492|ref|XP_006601777.1| PREDICTED:
uncharacterized protein LOC100527229 isoform X1 [Glycine
max] gi|571541496|ref|XP_006601778.1| PREDICTED:
uncharacterized protein LOC100527229 isoform X2 [Glycine
max] gi|255631830|gb|ACU16282.1| unknown [Glycine max]
Length = 232
Score = 228 bits (581), Expect = 4e-57
Identities = 117/181 (64%), Positives = 148/181 (81%)
Frame = +1
Query: 166 MEALKVSKANLVVYLHPSKTSVVAQSVKQELSTLLFKFNETFDGVLLAYEVVDVPSKHGK 345
ME LKVSKANL VY+HPSK++ V+Q+V ++LS+LLF F+E FDGV+LAY+V + K
Sbjct: 1 MEGLKVSKANLTVYIHPSKSNQVSQAVLRQLSSLLFTFSEIFDGVVLAYDVNSFDTC-AK 59
Query: 346 VLSGLYPYVGVKLTANLLLFAPKPDTFMEGKVVKLTEESIHIVVLGFSAAIITAEDIRDE 525
+LSG++PY GVKL NLLLF+PKP+ +EGKVVK+T+ESIH+VVLGFS+AII+ +DIR+E
Sbjct: 60 ILSGVHPYFGVKLKVNLLLFSPKPNMLLEGKVVKVTQESIHVVVLGFSSAIISEKDIREE 119
Query: 526 FKFKIKSGKNVYQSRSHKKHNIKVGTMIRFVVKSFDEEILHISGSLGSLCTGNISWLTKH 705
F K K G+ VY SRSHK+H IKVGTMIRF+VKSFDEEILH+ GSL TG+I WL K+
Sbjct: 120 FVCKTKRGQEVYVSRSHKRHVIKVGTMIRFLVKSFDEEILHVYGSLVPDHTGSIYWLDKN 179
Query: 706 L 708
L
Sbjct: 180 L 180
>gb|AGV54225.1| DNA-directed RNA polymerase I subunit rpa43-like protein [Phaseolus
vulgaris] gi|561012820|gb|ESW11681.1| hypothetical
protein PHAVU_008G050600g [Phaseolus vulgaris]
Length = 232
Score = 227 bits (579), Expect = 6e-57
Identities = 130/227 (57%), Positives = 162/227 (71%), Gaps = 2/227 (0%)
Frame = +1
Query: 166 MEALKVSKANLVVYLHPSKTSVVAQSVKQELSTLLFKFNETFDGVLLAYEVVDVPSKHGK 345
ME LKVSKANL VY+HPSK++ V+++V +ELS+LLF F+E GV+LAY+V + + K
Sbjct: 1 MEWLKVSKANLTVYIHPSKSNQVSKAVLRELSSLLFTFSEIVGGVVLAYDVNSLDTC-AK 59
Query: 346 VLSGLYPYVGVKLTANLLLFAPKPDTFMEGKVVKLTEESIHIVVLGFSAAIITAEDIRDE 525
+L G++PY+GVKL ANLLLF PKP+T +EGKVVKLT+ESIH+VVLGFSAAIIT +DIR+E
Sbjct: 60 ILPGVHPYLGVKLKANLLLFCPKPNTLLEGKVVKLTQESIHVVVLGFSAAIITEKDIREE 119
Query: 526 FKFKIKSGKNVYQSRSHKKHNIKVGTMIRFVVKSFDEEILHISGSLGSLCTGNISWLTKH 705
F K K G+ VY SRS+K+H IKVGTMIRF+VKSFDEEILHI GSL TG+I WL K+
Sbjct: 120 FVCKTKKGQEVYASRSNKRHVIKVGTMIRFLVKSFDEEILHICGSLIPDHTGSIYWLDKN 179
Query: 706 LPEAPAGD--XXXXXXXXXXXXFSTGTVDGGALSNDYHVLKKSKKQR 840
L D G VD G LSN V K++ +R
Sbjct: 180 LEVVSHADRSEKKKRIEPERIMLEQGAVD-GELSNLDIVQKRTNAKR 225
>ref|XP_003534490.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like isoform
X1 [Glycine max] gi|571479213|ref|XP_006587794.1|
PREDICTED: DNA-directed RNA polymerase I subunit
rpa43-like isoform X2 [Glycine max]
gi|571479215|ref|XP_006587795.1| PREDICTED: DNA-directed
RNA polymerase I subunit rpa43-like isoform X3 [Glycine
max]
Length = 232
Score = 226 bits (577), Expect = 1e-56
Identities = 118/183 (64%), Positives = 146/183 (79%), Gaps = 2/183 (1%)
Frame = +1
Query: 166 MEALKVSKANLVVYLHPSKTSVVAQSVKQELSTLLFKFNETFDGVLLAYEVVDVPSKH-- 339
ME LKVSKANL Y+HPSKT+ V+Q + ++LS+LLFKF+E F GV+LAY D+ S H
Sbjct: 1 MEGLKVSKANLTAYIHPSKTNQVSQPILRQLSSLLFKFSEIFHGVVLAY---DLNSLHTC 57
Query: 340 GKVLSGLYPYVGVKLTANLLLFAPKPDTFMEGKVVKLTEESIHIVVLGFSAAIITAEDIR 519
K+L G++PY GVKL NLLLF+PKP+ +EGKVVK+T+ESIH+VVLGFS+AIIT +DIR
Sbjct: 58 AKILPGVHPYFGVKLKVNLLLFSPKPNMLLEGKVVKVTQESIHVVVLGFSSAIITEKDIR 117
Query: 520 DEFKFKIKSGKNVYQSRSHKKHNIKVGTMIRFVVKSFDEEILHISGSLGSLCTGNISWLT 699
+EF K K G+ VY SRSHK+H IKVGTMIRF+VKSFDEEILH+ GSL TG+I WL
Sbjct: 118 EEFVCKTKRGQEVYASRSHKQHVIKVGTMIRFLVKSFDEEILHVYGSLVPDHTGSIYWLD 177
Query: 700 KHL 708
K+L
Sbjct: 178 KNL 180
>ref|XP_002306915.2| hypothetical protein POPTR_0005s25810g [Populus trichocarpa]
gi|550339753|gb|EEE93911.2| hypothetical protein
POPTR_0005s25810g [Populus trichocarpa]
Length = 230
Score = 224 bits (571), Expect = 5e-56
Identities = 122/227 (53%), Positives = 159/227 (70%), Gaps = 2/227 (0%)
Frame = +1
Query: 166 MEALKVSKANLVVYLHPSKTSVVAQSVKQELSTLLFKFNETFDGVLLAYEVVDVPSKHGK 345
ME L S ANL+VY+HPS++ V +++ +ELS+LLFK+++ FDGV+LAY V D K +
Sbjct: 1 MEGLSKSDANLIVYVHPSQSKNVDKAILRELSSLLFKYSQAFDGVVLAYSV-DPQDKCAR 59
Query: 346 VLSGLYPYVGVKLTANLLLFAPKPDTFMEGKVVKLTEESIHIVVLGFSAAIITAEDIRDE 525
+LSG++PY GV+L ANLL+F+PKP+ +EGKVVK+T ESIH +VLGFS+AIIT E+IR+E
Sbjct: 60 ILSGVHPYFGVRLRANLLIFSPKPNMLLEGKVVKITRESIHCIVLGFSSAIITDENIRNE 119
Query: 526 FKFKIKSGKNVYQSRSHKKHNIKVGTMIRFVVKSFDEEILHISGSLGSLCTGNISWLTKH 705
K+K K G+ VY SR HK+H IKVG +IRF VKS DEEILHISGSL TG++ WL K+
Sbjct: 120 LKYKAKHGEGVYVSRYHKRHVIKVGAVIRFEVKSLDEEILHISGSLIPANTGSVHWLDKY 179
Query: 706 LPEAPAGDXXXXXXXXXXXXFSTGTVDGGALS--NDYHVLKKSKKQR 840
+A TV G LS ND H +KKSKK+R
Sbjct: 180 FVDAAIDSNKETKTEEEMEMQEQITVGGETLSFVND-HEIKKSKKRR 225
>ref|XP_004147835.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like
[Cucumis sativus] gi|449476884|ref|XP_004154864.1|
PREDICTED: DNA-directed RNA polymerase I subunit
rpa43-like [Cucumis sativus]
Length = 231
Score = 222 bits (566), Expect = 2e-55
Identities = 111/183 (60%), Positives = 144/183 (78%)
Frame = +1
Query: 166 MEALKVSKANLVVYLHPSKTSVVAQSVKQELSTLLFKFNETFDGVLLAYEVVDVPSKHGK 345
ME LKVS AN+VVY+HPSK+ ++Q+V +EL +L KF+E F+GVLLAYE + K+ K
Sbjct: 1 MEGLKVSDANMVVYVHPSKSKKISQAVLRELGAMLLKFDEKFEGVLLAYEA-KIIDKNAK 59
Query: 346 VLSGLYPYVGVKLTANLLLFAPKPDTFMEGKVVKLTEESIHIVVLGFSAAIITAEDIRDE 525
+LSG++PY GV + A LLLF+PKP+ +EGKVVKL +ESIH++VLGF++A+IT EDIRDE
Sbjct: 60 ILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHVIVLGFASAVITYEDIRDE 119
Query: 526 FKFKIKSGKNVYQSRSHKKHNIKVGTMIRFVVKSFDEEILHISGSLGSLCTGNISWLTKH 705
FK + K G+ ++ SR+HK H IKVGTMIR +VKSFDEEILHISGSL TG+I WL K+
Sbjct: 120 FKHRTKHGEEMFVSRAHKHHIIKVGTMIRLLVKSFDEEILHISGSLVPSHTGSIHWLEKN 179
Query: 706 LPE 714
E
Sbjct: 180 SVE 182
>ref|XP_006302682.1| hypothetical protein CARUB_v10020789mg, partial [Capsella rubella]
gi|482571392|gb|EOA35580.1| hypothetical protein
CARUB_v10020789mg, partial [Capsella rubella]
Length = 270
Score = 217 bits (553), Expect = 6e-54
Identities = 105/183 (57%), Positives = 144/183 (78%)
Frame = +1
Query: 166 MEALKVSKANLVVYLHPSKTSVVAQSVKQELSTLLFKFNETFDGVLLAYEVVDVPSKHGK 345
ME LK+S+A L+VY+HPSK+ V Q++ +ELS+LLF++ ETFDGVLLAY+ V SK K
Sbjct: 75 MEGLKLSEAELMVYIHPSKSRNVFQAICRELSSLLFQYTETFDGVLLAYDAT-VKSKQAK 133
Query: 346 VLSGLYPYVGVKLTANLLLFAPKPDTFMEGKVVKLTEESIHIVVLGFSAAIITAEDIRDE 525
+LSGL+PY GV++ LLLF PKP + +EG++VK++ ESIH+VVLGFSAA++T DIR+E
Sbjct: 134 ILSGLHPYFGVRVNTRLLLFDPKPKSLVEGEIVKISPESIHVVVLGFSAAVVTDLDIREE 193
Query: 526 FKFKIKSGKNVYQSRSHKKHNIKVGTMIRFVVKSFDEEILHISGSLGSLCTGNISWLTKH 705
FKF++K G+ + SRSHK+H +K+GT++R V+SFDEE+LHI+GSL TG + WL KH
Sbjct: 194 FKFRVKDGEGCFVSRSHKRHALKLGTILRLQVQSFDEEVLHIAGSLLPENTGCVKWLEKH 253
Query: 706 LPE 714
E
Sbjct: 254 SEE 256
>ref|XP_002889036.1| hypothetical protein ARALYDRAFT_316494 [Arabidopsis lyrata subsp.
lyrata] gi|297334877|gb|EFH65295.1| hypothetical protein
ARALYDRAFT_316494 [Arabidopsis lyrata subsp. lyrata]
Length = 196
Score = 216 bits (551), Expect = 1e-53
Identities = 103/184 (55%), Positives = 145/184 (78%)
Frame = +1
Query: 166 MEALKVSKANLVVYLHPSKTSVVAQSVKQELSTLLFKFNETFDGVLLAYEVVDVPSKHGK 345
ME LK+S+A L++Y+HPSK+ V Q++ +ELS+LLF++NETFDGVLLAY+ V SK K
Sbjct: 1 MEGLKLSEAELMIYIHPSKSRNVFQAICRELSSLLFQYNETFDGVLLAYDAT-VKSKQAK 59
Query: 346 VLSGLYPYVGVKLTANLLLFAPKPDTFMEGKVVKLTEESIHIVVLGFSAAIITAEDIRDE 525
+L+GL+PY GV++ LLLF PKP +F+EGK+VK++ ESIH++VLGFSAA+IT DIR+E
Sbjct: 60 ILAGLHPYFGVRVNTRLLLFDPKPKSFVEGKIVKISPESIHVIVLGFSAAVITDVDIREE 119
Query: 526 FKFKIKSGKNVYQSRSHKKHNIKVGTMIRFVVKSFDEEILHISGSLGSLCTGNISWLTKH 705
FK++++ G+ + SRSHK+H +K+GTM+R V+SFDEE++HI+GSL TG + WL
Sbjct: 120 FKYRVRDGEGSFVSRSHKRHALKLGTMLRLQVQSFDEEVMHIAGSLLPENTGCVKWLENK 179
Query: 706 LPEA 717
EA
Sbjct: 180 SEEA 183
>ref|XP_006390285.1| hypothetical protein EUTSA_v10019169mg [Eutrema salsugineum]
gi|557086719|gb|ESQ27571.1| hypothetical protein
EUTSA_v10019169mg [Eutrema salsugineum]
Length = 196
Score = 216 bits (550), Expect = 1e-53
Identities = 107/184 (58%), Positives = 142/184 (77%)
Frame = +1
Query: 166 MEALKVSKANLVVYLHPSKTSVVAQSVKQELSTLLFKFNETFDGVLLAYEVVDVPSKHGK 345
ME LK+S A L+VY+HPSK V Q++ +ELS LLF+++ETFDGVLLAY+ V SK K
Sbjct: 1 MEGLKLSDAELMVYIHPSKCRNVFQAICRELSALLFQYDETFDGVLLAYDFT-VESKQAK 59
Query: 346 VLSGLYPYVGVKLTANLLLFAPKPDTFMEGKVVKLTEESIHIVVLGFSAAIITAEDIRDE 525
+L+GL PY GV++ LLLF PKP++ +EGK+VK++ ESIH+VVLGFSAA+IT DIR+E
Sbjct: 60 ILAGLNPYFGVRINTKLLLFDPKPNSLVEGKIVKISPESIHVVVLGFSAAVITDIDIREE 119
Query: 526 FKFKIKSGKNVYQSRSHKKHNIKVGTMIRFVVKSFDEEILHISGSLGSLCTGNISWLTKH 705
FK+K++ G+ + SRSHK+H +KVGTM+R V+SFDEE+LHI+GSL TG + WL K
Sbjct: 120 FKYKMRDGEGCFVSRSHKRHALKVGTMLRLQVESFDEEVLHIAGSLMPANTGCVKWLEKQ 179
Query: 706 LPEA 717
EA
Sbjct: 180 SEEA 183
>ref|NP_565115.1| DNA-directed RNA polymerase [Arabidopsis thaliana]
gi|42572115|ref|NP_974148.1| DNA-directed RNA polymerase
[Arabidopsis thaliana] gi|23297345|gb|AAN12946.1|
unknown protein [Arabidopsis thaliana]
gi|332197622|gb|AEE35743.1| DNA-directed RNA polymerase
[Arabidopsis thaliana] gi|332197623|gb|AEE35744.1|
DNA-directed RNA polymerase [Arabidopsis thaliana]
Length = 196
Score = 215 bits (547), Expect = 3e-53
Identities = 102/184 (55%), Positives = 145/184 (78%)
Frame = +1
Query: 166 MEALKVSKANLVVYLHPSKTSVVAQSVKQELSTLLFKFNETFDGVLLAYEVVDVPSKHGK 345
ME LK+S+A L++++HPS++ V Q + +ELS+LLF++NETFDGVLLAY+ V SK K
Sbjct: 1 MEGLKLSEAELMIFIHPSQSRNVFQGICRELSSLLFQYNETFDGVLLAYDAT-VKSKQAK 59
Query: 346 VLSGLYPYVGVKLTANLLLFAPKPDTFMEGKVVKLTEESIHIVVLGFSAAIITAEDIRDE 525
+L+GL+PY GV++ LLLF PKP +F+EGK+VK++ ESIH++VLGFSAA+IT DIR+E
Sbjct: 60 ILTGLHPYFGVRVNTRLLLFDPKPKSFVEGKIVKISPESIHVIVLGFSAAVITDVDIREE 119
Query: 526 FKFKIKSGKNVYQSRSHKKHNIKVGTMIRFVVKSFDEEILHISGSLGSLCTGNISWLTKH 705
FK++++ G+ + SRSHK+H +K+GTM+R V+SFDEE++HI+GSL TG + WL K
Sbjct: 120 FKYRVRDGEGSFVSRSHKRHALKLGTMLRLQVQSFDEEVMHIAGSLLPENTGCVKWLEKK 179
Query: 706 LPEA 717
EA
Sbjct: 180 SEEA 183
>gb|AAK93576.1| unknown protein [Arabidopsis thaliana]
Length = 196
Score = 213 bits (543), Expect = 9e-53
Identities = 101/184 (54%), Positives = 144/184 (78%)
Frame = +1
Query: 166 MEALKVSKANLVVYLHPSKTSVVAQSVKQELSTLLFKFNETFDGVLLAYEVVDVPSKHGK 345
ME LK+S+A L++++HPS++ V Q + +ELS+LLF++NETFDGVLLAY+ V SK K
Sbjct: 1 MEGLKLSEAELMIFIHPSQSRNVFQGICRELSSLLFQYNETFDGVLLAYDAT-VKSKQAK 59
Query: 346 VLSGLYPYVGVKLTANLLLFAPKPDTFMEGKVVKLTEESIHIVVLGFSAAIITAEDIRDE 525
+L+GL+PY GV++ LLLF PKP +F+EGK+ K++ ESIH++VLGFSAA+IT DIR+E
Sbjct: 60 ILTGLHPYFGVRVNTRLLLFDPKPKSFVEGKIAKISPESIHVIVLGFSAAVITDVDIREE 119
Query: 526 FKFKIKSGKNVYQSRSHKKHNIKVGTMIRFVVKSFDEEILHISGSLGSLCTGNISWLTKH 705
FK++++ G+ + SRSHK+H +K+GTM+R V+SFDEE++HI+GSL TG + WL K
Sbjct: 120 FKYRVRDGEGSFVSRSHKRHALKLGTMLRLQVQSFDEEVMHIAGSLLPENTGCVKWLEKK 179
Query: 706 LPEA 717
EA
Sbjct: 180 SEEA 183
>ref|XP_002301988.2| hypothetical protein POPTR_0002s02620g [Populus trichocarpa]
gi|550344135|gb|EEE81261.2| hypothetical protein
POPTR_0002s02620g [Populus trichocarpa]
Length = 232
Score = 213 bits (541), Expect = 2e-52
Identities = 116/229 (50%), Positives = 159/229 (69%), Gaps = 4/229 (1%)
Frame = +1
Query: 166 MEALKVSKANLVVYLHPSKTSVVAQSVKQELSTLLFKFNETFDGVLLAYEVVDVPSKHGK 345
ME L S A+L+VY HPS++ V +++ +ELS+LLFK+++ FDGV+LAY V + K +
Sbjct: 1 MEGLSKSVADLIVYEHPSQSKDVDKAILRELSSLLFKYSQAFDGVVLAYSV-EPQDKCAR 59
Query: 346 VLSGLYPYVGVKLTANLLLFAPKPDTFMEGKVVKLTEESIHIVVLGFSAAIITAEDIRDE 525
+LSG++PY GV+L AN+L+F+PKP+ +EGKVVKLT ESIH +VLGFS+AI+T E+IR+E
Sbjct: 60 ILSGVHPYFGVRLQANMLIFSPKPNMLLEGKVVKLTRESIHCIVLGFSSAIVTDENIRNE 119
Query: 526 FKFKIKSGKNVYQSRSHKKHNIKVGTMIRFVVKSFDEEILHISGSLGSLCTGNISWLTKH 705
K+K K G+ VY SR HK+H IKVG ++RFVVKS DEEILHISGSL TG++ WL K+
Sbjct: 120 LKYKSKHGEGVYVSRYHKRHVIKVGAVLRFVVKSLDEEILHISGSLIPANTGSVHWLDKY 179
Query: 706 LPEAPA-GDXXXXXXXXXXXXFSTGTVDGG---ALSNDYHVLKKSKKQR 840
+A + + GG L ND H +K+SKK+R
Sbjct: 180 YVDAGTDSNKKARRQIEEEVEMQEQVIVGGETLPLVND-HEVKRSKKRR 227
>ref|XP_004239824.1| PREDICTED: uncharacterized protein LOC101248579 [Solanum
lycopersicum]
Length = 231
Score = 213 bits (541), Expect = 2e-52
Identities = 111/186 (59%), Positives = 138/186 (74%)
Frame = +1
Query: 166 MEALKVSKANLVVYLHPSKTSVVAQSVKQELSTLLFKFNETFDGVLLAYEVVDVPSKHGK 345
MEALK +ANL+VYLHPS V +V +ELS+LLFKFNE DGV+L YE S +
Sbjct: 1 MEALKECRANLLVYLHPSNAKNVETAVYRELSSLLFKFNEALDGVVLTYEP-KFSSNLAR 59
Query: 346 VLSGLYPYVGVKLTANLLLFAPKPDTFMEGKVVKLTEESIHIVVLGFSAAIITAEDIRDE 525
+L G++PY GVKL A LLLF PKP+ +EG+VVK+ ++SIHIVVLGFS+A+I EDIR++
Sbjct: 60 ILPGIHPYFGVKLEAKLLLFNPKPEMLLEGEVVKVGQQSIHIVVLGFSSAVIADEDIRED 119
Query: 526 FKFKIKSGKNVYQSRSHKKHNIKVGTMIRFVVKSFDEEILHISGSLGSLCTGNISWLTKH 705
FK+KIK GK V+ SRS+KKH IKVGT +RF VK+FDEEILH+ GSL TGNI WL
Sbjct: 120 FKYKIKHGKEVFVSRSNKKHRIKVGTTLRFSVKNFDEEILHMCGSLIPDNTGNIQWLETK 179
Query: 706 LPEAPA 723
E+ A
Sbjct: 180 AEESQA 185
>ref|XP_006365851.1| PREDICTED: uncharacterized protein LOC102591771 [Solanum tuberosum]
Length = 231
Score = 211 bits (537), Expect = 5e-52
Identities = 112/186 (60%), Positives = 136/186 (73%)
Frame = +1
Query: 166 MEALKVSKANLVVYLHPSKTSVVAQSVKQELSTLLFKFNETFDGVLLAYEVVDVPSKHGK 345
MEALK +ANLVV LHPS V V +ELS+LLFKFNE DGV+L YE S +
Sbjct: 1 MEALKECRANLVVNLHPSNAKNVETGVYRELSSLLFKFNEALDGVVLTYEP-KFSSNLAR 59
Query: 346 VLSGLYPYVGVKLTANLLLFAPKPDTFMEGKVVKLTEESIHIVVLGFSAAIITAEDIRDE 525
+L G++PY GV+L A LLLF PKP+ +EG+VVK+ E+SIHIVVLGFS+A+I EDIR++
Sbjct: 60 ILPGIHPYFGVRLEAKLLLFNPKPEMLLEGEVVKVGEQSIHIVVLGFSSAVIADEDIRED 119
Query: 526 FKFKIKSGKNVYQSRSHKKHNIKVGTMIRFVVKSFDEEILHISGSLGSLCTGNISWLTKH 705
FK+KIK GK V+ SRS+KKH IKVGT +RF VK+FDEEILHI GSL TGNI WL
Sbjct: 120 FKYKIKHGKEVFVSRSNKKHRIKVGTTLRFSVKNFDEEILHICGSLIPDNTGNIQWLETK 179
Query: 706 LPEAPA 723
E+ A
Sbjct: 180 AEESQA 185