BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00011676
         (2073 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ...   631   e-178
gb|EOY23460.1| Sigma factor E isoform 1 [Theobroma cacao] gi|508...   622   e-175
gb|EMJ20209.1| hypothetical protein PRUPE_ppa004259mg [Prunus pe...   610   e-172
ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,...   598   e-168
gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]     598   e-168
ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,...   596   e-167
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,...   584   e-164
ref|XP_002331841.1| predicted protein [Populus trichocarpa]           580   e-163
ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citr...   580   e-163
ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,...   578   e-162
ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,...   568   e-159
ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [...   568   e-159
ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,...   565   e-158
ref|XP_006376620.1| RNA polymerase sigma subunit SigE family pro...   563   e-158
ref|XP_002333134.1| predicted protein [Populus trichocarpa]           563   e-158
ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glyci...   558   e-156
ref|XP_006578934.1| PREDICTED: RNA polymerase sigma factor sigE,...   552   e-154
ref|XP_006581623.1| PREDICTED: RNA polymerase sigma factor sigE,...   551   e-154
ref|NP_001276145.1| RNA polymerase sigma factor sigE, chloroplas...   549   e-153
dbj|BAJ34205.1| unnamed protein product [Thellungiella halophila]     549   e-153

>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
            gi|302143685|emb|CBI22546.3| unnamed protein product
            [Vitis vinifera]
          Length = 518

 Score =  631 bits (1627), Expect = e-178
 Identities = 328/496 (66%), Positives = 385/496 (77%)
 Frame = -3

Query: 1795 HQYRIKGPLILGFKVDKNKKSTLVAVSEPSRLKLETKKENHKRVRSVTKPSKGVHVASVA 1616
            HQ  ++ PL+L FK DK K   LV   EP  L +ET K++ KR+R  +KPSK V   S  
Sbjct: 26   HQTPLRRPLVLAFKADKAKNIALVTPHEPIPLPIETSKDHKKRLRRASKPSKRVKAVSTD 85

Query: 1615 EASPYAVELDLNEAAAKLESIFKLSPSTDVLDAENIDQFVXXXXXXXXKSPEVDEKKTKK 1436
            E SP +VELD NEAAAKLE+I+KLSP+TDV +AE++++ V        +    D+K  K+
Sbjct: 86   EVSPCSVELDYNEAAAKLENIYKLSPATDVSEAEDLERVVRRGRQRRKRVTLADDKAEKE 145

Query: 1435 TDAIVVRNKNGKQKRLSLAKRIEMKQSKDSKEEKEVTSTERKRTSKNEDEKIDELVREYS 1256
                VVR  N K KRLSL KRI + + K   +EK V S ++KR SKNEDE ID LVREYS
Sbjct: 146  VSDNVVRIHNKKPKRLSLEKRIALSKMK---QEKAVASIQKKRDSKNEDENIDVLVREYS 202

Query: 1255 SSTDLVSLDWKKMKIPPVLPSTEHTWLFKSMEPMKALNQVKENLRTELGRDPTDNELGET 1076
            +STDLVSLDWKKMKIPPVLP +EH WLFK M+PMK L +VK+NL+ +LGR+PTD EL E 
Sbjct: 203  ASTDLVSLDWKKMKIPPVLPPSEHAWLFKLMQPMKGLLEVKDNLQKDLGREPTDGELAEA 262

Query: 1075 MNMTVVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKYFQDFTNGPRFQDLCQAGVKGLII 896
            M+M+ VQVRRH+EVG AARNKLIKHNLRLVLFV+NKYFQ+F NGP+FQDLCQAGVKGLI 
Sbjct: 263  MSMSAVQVRRHMEVGQAARNKLIKHNLRLVLFVINKYFQEFANGPKFQDLCQAGVKGLIT 322

Query: 895  AIDRFEPRRKFRLSTYALFWIRHAIIRSMTVSSFTRVSFGLESVRYEIHKAKLELMFELK 716
            AIDRFEP+R FRLSTY LFWIRHAI+RSMT+SSFTRVSFGLESVR EI +AKLEL+F+L+
Sbjct: 323  AIDRFEPKRSFRLSTYGLFWIRHAIMRSMTLSSFTRVSFGLESVRVEIQRAKLELLFKLQ 382

Query: 715  RMPTEEEIFERVGISAERYQDVMRASNSVASLHSRNQVTQEELINGIVDVNGVGSDDQIQ 536
            R+PTEEEI E+VGIS ERY +VMRAS SV SLH+R+  TQEE INGI DV GVG D   Q
Sbjct: 383  RLPTEEEIIEKVGISPERYHEVMRASKSVLSLHARHATTQEEYINGITDVEGVGGDRGRQ 442

Query: 535  PXXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLSISREMVRKHEMKALM 356
                          LKPKESLV+RQRYGLDGKGDRTLGEIAGNLSISREMVRKHE+KALM
Sbjct: 443  LALLRLALDDVLDSLKPKESLVMRQRYGLDGKGDRTLGEIAGNLSISREMVRKHEVKALM 502

Query: 355  KLKHPTRVDYLQRHIY 308
            KLKHP RVDYL+++I+
Sbjct: 503  KLKHPARVDYLRQYIF 518


>gb|EOY23460.1| Sigma factor E isoform 1 [Theobroma cacao]
            gi|508776205|gb|EOY23461.1| Sigma factor E isoform 1
            [Theobroma cacao]
          Length = 516

 Score =  622 bits (1603), Expect = e-175
 Identities = 328/518 (63%), Positives = 385/518 (74%)
 Frame = -3

Query: 1864 MGVVTVXXXXXXXXXXXXXXSTVHQYRIKGPLILGFKVDKNKKSTLVAVSEPSRLKLETK 1685
            MGVV+V               +  +   + PL + FK DK+  + LV   E   L +ET 
Sbjct: 1    MGVVSVSSSAARTPLGLSTKFSTQRCTSRRPLTVAFKADKSDNTALVTPQEHILLPIETA 60

Query: 1684 KENHKRVRSVTKPSKGVHVASVAEASPYAVELDLNEAAAKLESIFKLSPSTDVLDAENID 1505
            KE+ KR     K  K V+     + SP  +E+D NEAAAKLE+I+KLSP+T   D E ++
Sbjct: 61   KEHPKRRGKAKKDPKIVNHVFTDDGSPCTLEVDYNEAAAKLENIYKLSPATRSSDVEEVE 120

Query: 1504 QFVXXXXXXXXKSPEVDEKKTKKTDAIVVRNKNGKQKRLSLAKRIEMKQSKDSKEEKEVT 1325
              +        +S E DEK     D IVVRN+  + KRLSL  RI +K+++   EEK V 
Sbjct: 121  GKIKGRRQRRKRSKESDEKGVNSNDQIVVRNQTNRIKRLSLDNRIALKKNR---EEKPVV 177

Query: 1324 STERKRTSKNEDEKIDELVREYSSSTDLVSLDWKKMKIPPVLPSTEHTWLFKSMEPMKAL 1145
            S  RK++S+NE EKID LVR+YS+STDLVSLDW+KMKIPPVLPS EHTWLFK M+PMKAL
Sbjct: 178  SVRRKKSSENESEKIDRLVRDYSASTDLVSLDWRKMKIPPVLPSIEHTWLFKLMQPMKAL 237

Query: 1144 NQVKENLRTELGRDPTDNELGETMNMTVVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKY 965
             Q KENL+ +LGRDPT++EL E  NM+  QVR+HLEVG AARNKLIKHNLRLVLF +NKY
Sbjct: 238  LQAKENLQKDLGRDPTEDELAEATNMSAAQVRKHLEVGQAARNKLIKHNLRLVLFSINKY 297

Query: 964  FQDFTNGPRFQDLCQAGVKGLIIAIDRFEPRRKFRLSTYALFWIRHAIIRSMTVSSFTRV 785
            FQDF NGPRFQDLCQAGVKGLI AIDRFEPRR+FRLSTY+LFWIRHAIIRSMT+SSFTRV
Sbjct: 298  FQDFANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYSLFWIRHAIIRSMTLSSFTRV 357

Query: 784  SFGLESVRYEIHKAKLELMFELKRMPTEEEIFERVGISAERYQDVMRASNSVASLHSRNQ 605
            SFGLESVR EI +AKLEL+FEL R PTEEEI ++VGIS ERYQ+VMRAS  VASLHSR+ 
Sbjct: 358  SFGLESVRVEIQRAKLELLFELHREPTEEEIIKKVGISPERYQEVMRASKPVASLHSRHS 417

Query: 604  VTQEELINGIVDVNGVGSDDQIQPXXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTL 425
            VTQEE INGI D++GVG D + QP             LKPKESLVIRQRYGLDGKGDRTL
Sbjct: 418  VTQEEFINGITDIDGVGGDHRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTL 477

Query: 424  GEIAGNLSISREMVRKHEMKALMKLKHPTRVDYLQRHI 311
            GEIAGNL+ISREMVRKHE+KALMKLKHP RVDYL+R++
Sbjct: 478  GEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYV 515


>gb|EMJ20209.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
          Length = 519

 Score =  610 bits (1573), Expect = e-172
 Identities = 327/521 (62%), Positives = 391/521 (75%), Gaps = 3/521 (0%)
 Frame = -3

Query: 1864 MGVVTVXXXXXXXXXXXXXXSTVHQYRIKGPLILGFKVDKNKKSTLVAVSEPSRLKLETK 1685
            MGVVTV               T+ +  ++ PLI+ FK D+  K+ LVA  E   L +ET+
Sbjct: 1    MGVVTVSSSASRTPLGLSTKLTIQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETR 60

Query: 1684 KENHKRVRSVTKPSKGVHVASVAEASPYAVELDLNEAAAKLESIFKLSPSTDV-LDAENI 1508
            K++ KR+    K +K V  A+   ASP  +E+D NEAAAKLE+++K SP T+   D E++
Sbjct: 61   KKHQKRLGKARKLAKSVKSATTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDV 120

Query: 1507 DQFVXXXXXXXXKSPEVD-EKKTKKTDAIVVRNKNGKQKRLSLAKRIEMKQSKDSKEEKE 1331
            D  +        K+ E D +K   +T   VVRN+  K KRLSL KR+ +K +KD   EK 
Sbjct: 121  DGLMRRGRKRRKKTSESDADKDENRTSNTVVRNRTKKAKRLSLNKRVALKWNKD---EKV 177

Query: 1330 VTSTERKRTS-KNEDEKIDELVREYSSSTDLVSLDWKKMKIPPVLPSTEHTWLFKSMEPM 1154
            ++S  RKR S KNE+EKI+ELVREYS+STDLVSLDWKKMKIPPVL S+EH WLFK M+PM
Sbjct: 178  ISSIVRKRKSRKNENEKIEELVREYSTSTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPM 237

Query: 1153 KALNQVKENLRTELGRDPTDNELGETMNMTVVQVRRHLEVGHAARNKLIKHNLRLVLFVM 974
            K L +VKENL+ +LGR+PT+ EL E  NM+VVQV++HLEVG AAR+KLIKHNLRLVLFVM
Sbjct: 238  KGLLEVKENLQKDLGREPTNGELAEATNMSVVQVKKHLEVGRAARSKLIKHNLRLVLFVM 297

Query: 973  NKYFQDFTNGPRFQDLCQAGVKGLIIAIDRFEPRRKFRLSTYALFWIRHAIIRSMTVSSF 794
            NKYFQDF NGP+FQDLCQAGVKGLI AIDRFEP+R FRLSTY LFWIRHAIIRSMT+SSF
Sbjct: 298  NKYFQDFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSF 357

Query: 793  TRVSFGLESVRYEIHKAKLELMFELKRMPTEEEIFERVGISAERYQDVMRASNSVASLHS 614
            TRVSFGLESVR EI KAKL ++F LKRMPTE+EI E+VGIS ERY +VMRAS  V SLHS
Sbjct: 358  TRVSFGLESVRAEIQKAKLGMLFALKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLHS 417

Query: 613  RNQVTQEELINGIVDVNGVGSDDQIQPXXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGD 434
            R+  TQEE INGI DV+GV  D++ +P             LKPKESLVIRQRYGLDGKGD
Sbjct: 418  RHTTTQEEFINGITDVDGVEGDNRQKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGD 477

Query: 433  RTLGEIAGNLSISREMVRKHEMKALMKLKHPTRVDYLQRHI 311
            RTLGEIAGNL+ISREMVRKHE+KALMKLKHP RVDYL+R++
Sbjct: 478  RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYV 518


>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 516

 Score =  598 bits (1543), Expect = e-168
 Identities = 319/519 (61%), Positives = 378/519 (72%)
 Frame = -3

Query: 1864 MGVVTVXXXXXXXXXXXXXXSTVHQYRIKGPLILGFKVDKNKKSTLVAVSEPSRLKLETK 1685
            MGVVTV               +     +K P+I+ FK DK K +TL+A  E   L +ET 
Sbjct: 1    MGVVTVSSSASRSPLGLSSRFSTRLCPLKRPVIVSFKKDKTKNTTLIAPKESISLSIETS 60

Query: 1684 KENHKRVRSVTKPSKGVHVASVAEASPYAVELDLNEAAAKLESIFKLSPSTDVLDAENID 1505
            KEN KR R V+K S+ VH  ++ EASP  +ELD +EAAAKLESI+K S  T   + E  D
Sbjct: 61   KENEKRSRRVSKRSERVHAVAI-EASPSTLELDYSEAAAKLESIYKRSLETASSNTEVQD 119

Query: 1504 QFVXXXXXXXXKSPEVDEKKTKKTDAIVVRNKNGKQKRLSLAKRIEMKQSKDSKEEKEVT 1325
              V        +  E DE+  K+    VV+N+    KRL+L +RI + ++K+   E   +
Sbjct: 120  HLVKRRPRTRKRIVEGDEEAKKEVADNVVKNRRKTSKRLNLDQRIALLKNKEG--EMVAS 177

Query: 1324 STERKRTSKNEDEKIDELVREYSSSTDLVSLDWKKMKIPPVLPSTEHTWLFKSMEPMKAL 1145
            S  RK     EDEKID+LVREYS +TDL SLDWKKMKIPPVLPS+EH WLFK M+PMKA+
Sbjct: 178  SERRKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHVWLFKLMQPMKAI 237

Query: 1144 NQVKENLRTELGRDPTDNELGETMNMTVVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKY 965
             QVKENL+ +LGR+PTD E+ E  NM   ++R+ LEVG AARNKLIKHNLRLVLFVMNKY
Sbjct: 238  LQVKENLQNDLGREPTDGEVAEATNMDASELRKKLEVGRAARNKLIKHNLRLVLFVMNKY 297

Query: 964  FQDFTNGPRFQDLCQAGVKGLIIAIDRFEPRRKFRLSTYALFWIRHAIIRSMTVSSFTRV 785
            FQDF NG RFQDLCQAGVKGLI AIDRFEP RKFRLSTY LFWIRHAIIRSMT SSFT+V
Sbjct: 298  FQDFANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKV 357

Query: 784  SFGLESVRYEIHKAKLELMFELKRMPTEEEIFERVGISAERYQDVMRASNSVASLHSRNQ 605
             FGLES+R EI KAKLEL+FEL+R+PT+EEI  RVG+S ERY +VM+ S  V+SLH+RN+
Sbjct: 358  PFGLESIRVEIQKAKLELLFELQRIPTDEEIIRRVGLSPERYHEVMKVSKPVSSLHARNK 417

Query: 604  VTQEELINGIVDVNGVGSDDQIQPXXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTL 425
             TQEELINGI DV+GV  D + QP             LKPKESLVIRQRYGLDGKGDRTL
Sbjct: 418  TTQEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTL 477

Query: 424  GEIAGNLSISREMVRKHEMKALMKLKHPTRVDYLQRHIY 308
            GEIAGNL+ISREMVRKHE+KALMKLKHPTRVDY++R+I+
Sbjct: 478  GEIAGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYIF 516


>gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 517

 Score =  598 bits (1541), Expect = e-168
 Identities = 323/493 (65%), Positives = 375/493 (76%), Gaps = 2/493 (0%)
 Frame = -3

Query: 1783 IKGPLILGFKVDKNKKSTLVAVSEPSRLKLETKKENHKRVRSVTKPSKGVHVASVAEASP 1604
            +K PLI+ FK DK+ K+ LVA  +   L +ET+KE   RV    K S  V   +  EAS 
Sbjct: 29   LKKPLIVAFKGDKSNKTVLVAPQDQIILPVETRKEVKSRVGKAKKSSNRVKAVATDEAST 88

Query: 1603 YAVELDLNEAAAKLESIFKLSPSTDVLDAENIDQFVXXXXXXXXKSPEVDEKKTKK--TD 1430
              +E+D NEAAAKLE+IFKLS S DV DA  +               E DE+  KK  T 
Sbjct: 89   STMEVDYNEAAAKLENIFKLS-SADVEDAVGLTS--RGRRRRSKVIGESDERAGKKSTTS 145

Query: 1429 AIVVRNKNGKQKRLSLAKRIEMKQSKDSKEEKEVTSTERKRTSKNEDEKIDELVREYSSS 1250
              VVRN+  K KRLSL KR+E+K  +D +E   V    ++R S NE+EKI++LVREYS+S
Sbjct: 146  DTVVRNRKKKAKRLSLHKRVELK--RDKEENVAVVLVRKRRESLNEEEKIEKLVREYSAS 203

Query: 1249 TDLVSLDWKKMKIPPVLPSTEHTWLFKSMEPMKALNQVKENLRTELGRDPTDNELGETMN 1070
            TDLVSLDWKKMKIPPVLPS+EHTWLFK M+P+K L QV E+L+  LGR+PT+NEL E  N
Sbjct: 204  TDLVSLDWKKMKIPPVLPSSEHTWLFKLMQPLKQLFQVGEDLQKTLGREPTENELAEATN 263

Query: 1069 MTVVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKYFQDFTNGPRFQDLCQAGVKGLIIAI 890
            ++VVQV+RHLE G AARNKLIKHNLRLVLFVMNKYFQDFTNGP+FQDLCQAGV+GLI AI
Sbjct: 264  ISVVQVKRHLEAGRAARNKLIKHNLRLVLFVMNKYFQDFTNGPKFQDLCQAGVRGLITAI 323

Query: 889  DRFEPRRKFRLSTYALFWIRHAIIRSMTVSSFTRVSFGLESVRYEIHKAKLELMFELKRM 710
            DRFEP+R+FRLSTY LFWIRHAIIRSMTVSSFTRVSFGLESVR EI KAK+EL FELKR+
Sbjct: 324  DRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSFTRVSFGLESVRAEIQKAKIELTFELKRL 383

Query: 709  PTEEEIFERVGISAERYQDVMRASNSVASLHSRNQVTQEELINGIVDVNGVGSDDQIQPX 530
            PTEEEI E+VGIS ERY +VMRAS  V SL+SR+  TQEE IN I DV+GV  DD+ +P 
Sbjct: 384  PTEEEIIEKVGISPERYHEVMRASKPVISLNSRHVTTQEEFINAITDVDGVDGDDRRKPA 443

Query: 529  XXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLSISREMVRKHEMKALMKL 350
                        LKPKESLVIRQRYGLDGKGDRTLGEIAGNL+ISREMVRKHE+KALMKL
Sbjct: 444  LLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKL 503

Query: 349  KHPTRVDYLQRHI 311
            KHP RVDYL+R++
Sbjct: 504  KHPARVDYLRRYM 516


>ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Fragaria vesca subsp.
            vesca]
          Length = 520

 Score =  596 bits (1537), Expect = e-167
 Identities = 321/494 (64%), Positives = 377/494 (76%), Gaps = 3/494 (0%)
 Frame = -3

Query: 1783 IKGPLILGFKVDKNKKSTLVAVSEPSRLKLETKKENHKRVRSVTKPSKGVHVASVAEASP 1604
            ++ PLI+ F+ DK+ K  LVA  E   L +ET K+  KR+    K  K V  A + EA  
Sbjct: 29   LRKPLIVAFRTDKSDKKALVAPQEKVPLPIETGKKVQKRLGKARKLPKSVKAALIEEAPT 88

Query: 1603 YAVELDLNEAAAKLESIFKLSPSTDVLDAENIDQFVXXXXXXXXKS-PEVDEKKTKKT-D 1430
              +ELD NEAAAKLE+++K SP T+  D EN+D  +        K   EVD+K  K+T D
Sbjct: 89   CDLELDYNEAAAKLENLYKRSPETEASDVENVDGLMIKRGRKRRKKISEVDDKVEKRTSD 148

Query: 1429 AIVVRNKNGKQKRLSLAKRIEMKQSKDSKEEKEVTSTERKRTSK-NEDEKIDELVREYSS 1253
             IVVR+   K KRLSL KR+ +K +KD   EK   S  RKR  K +E+E ++ELVREYS+
Sbjct: 149  DIVVRSVTKKAKRLSLDKRVALKWNKD---EKVAASVVRKRKDKRSENEMMEELVREYSA 205

Query: 1252 STDLVSLDWKKMKIPPVLPSTEHTWLFKSMEPMKALNQVKENLRTELGRDPTDNELGETM 1073
            STDLVSLDWKKM+IPPVL S+EHTWLFK M+PMK L +VKE L+ +LGR+P   EL E  
Sbjct: 206  STDLVSLDWKKMRIPPVLSSSEHTWLFKLMQPMKGLLEVKEILQKDLGREPNKGELAEAT 265

Query: 1072 NMTVVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKYFQDFTNGPRFQDLCQAGVKGLIIA 893
            NMTVVQV+RHLEVG AARNKLIKHNLRLVLFV+NKYFQDF NGP+FQDLCQAGVKGLI A
Sbjct: 266  NMTVVQVKRHLEVGRAARNKLIKHNLRLVLFVINKYFQDFANGPKFQDLCQAGVKGLITA 325

Query: 892  IDRFEPRRKFRLSTYALFWIRHAIIRSMTVSSFTRVSFGLESVRYEIHKAKLELMFELKR 713
            IDRFEP+R+FRLSTY LFWIRHAIIRSMT+SSFTRVSFGLESVR EI KAKLE++ +LKR
Sbjct: 326  IDRFEPQRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRAEIQKAKLEMLVQLKR 385

Query: 712  MPTEEEIFERVGISAERYQDVMRASNSVASLHSRNQVTQEELINGIVDVNGVGSDDQIQP 533
            MPTE+EI E+VGIS ERY +VMRAS  V SL+SR+ VTQEE INGI DV+GV  D++ +P
Sbjct: 386  MPTEDEIIEKVGISPERYHEVMRASKPVFSLNSRHSVTQEEFINGITDVDGVDGDNRRKP 445

Query: 532  XXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLSISREMVRKHEMKALMK 353
                         LKPKESLVIRQRYGLDGKGDRTLGEIAGNL+ISREMVRKHE+KALMK
Sbjct: 446  ALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMK 505

Query: 352  LKHPTRVDYLQRHI 311
            LKHP RVDYL+R+I
Sbjct: 506  LKHPARVDYLRRYI 519


>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform 1 [Solanum
            lycopersicum]
          Length = 516

 Score =  584 bits (1505), Expect = e-164
 Identities = 313/520 (60%), Positives = 379/520 (72%), Gaps = 1/520 (0%)
 Frame = -3

Query: 1864 MGVVTVXXXXXXXXXXXXXXSTVHQYRIKGPLILGFKVDKNKKSTLVAVSEPSRLKLETK 1685
            MGVVTV               +     +K P+I+ FK D  K +TLV+  E     +ET 
Sbjct: 1    MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETS 60

Query: 1684 KENHKRVRSVTKPSKGVHVASVAEASPYAVELDLNEAAAKLESIFKLSPSTDVLDAENID 1505
            KEN KR R V+K ++ VH  ++ EA P  +ELD +EAAAKLESI+K S  T   + E  D
Sbjct: 61   KENEKRSRRVSKRTERVHAVTI-EAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKD 119

Query: 1504 QFVXXXXXXXXKSPEVDEKKTKKTDAIVVRNKNGKQKRLSLAKRIEMKQSKDSKEEKEVT 1325
              V        +  E DE+  K+    VV+N+  K KRL+L +RI + ++K   E K + 
Sbjct: 120  HLVKRRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNK---EGKMLA 176

Query: 1324 STERKRTSKN-EDEKIDELVREYSSSTDLVSLDWKKMKIPPVLPSTEHTWLFKSMEPMKA 1148
            S+ER++ +++ EDEKID+LVREYS +TDL SLDWKKMKIPPVLPS+EHTWLFK M+PMKA
Sbjct: 177  SSERRKLNEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKA 236

Query: 1147 LNQVKENLRTELGRDPTDNELGETMNMTVVQVRRHLEVGHAARNKLIKHNLRLVLFVMNK 968
            + QVKENL+ +LGR+PTD E+ E  NM   ++R+ LE G AARNKLIKHNLRLVLFVMNK
Sbjct: 237  ILQVKENLQNDLGREPTDGEVAEATNMDASELRKKLEAGRAARNKLIKHNLRLVLFVMNK 296

Query: 967  YFQDFTNGPRFQDLCQAGVKGLIIAIDRFEPRRKFRLSTYALFWIRHAIIRSMTVSSFTR 788
            YFQDF N  RFQDLCQAGVKGLI AIDRFEP RKFRLSTY LFWIRHAIIR MT SSFT+
Sbjct: 297  YFQDFANASRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRYMTTSSFTK 356

Query: 787  VSFGLESVRYEIHKAKLELMFELKRMPTEEEIFERVGISAERYQDVMRASNSVASLHSRN 608
            V FGLES+R EI KAKLEL+FEL+R+PT++EI +RVG S ERY +VM+ S  + SLH+RN
Sbjct: 357  VPFGLESIRVEIQKAKLELLFELQRIPTDDEIIKRVGFSPERYHEVMKVSKPIFSLHARN 416

Query: 607  QVTQEELINGIVDVNGVGSDDQIQPXXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRT 428
            + TQEELINGI DV+GV  D + QP             LKPKESLVIRQRYGLDGKGDRT
Sbjct: 417  KTTQEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRT 476

Query: 427  LGEIAGNLSISREMVRKHEMKALMKLKHPTRVDYLQRHIY 308
            LGEIAGNL+ISREMVRKHE+KALMKLKHPTRVDY++R+I+
Sbjct: 477  LGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYIF 516


>ref|XP_002331841.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  580 bits (1496), Expect = e-163
 Identities = 314/518 (60%), Positives = 376/518 (72%)
 Frame = -3

Query: 1864 MGVVTVXXXXXXXXXXXXXXSTVHQYRIKGPLILGFKVDKNKKSTLVAVSEPSRLKLETK 1685
            MG+V+V               +  +   K PLI+ FK DK+ ++ LVA  E   L +ET 
Sbjct: 1    MGIVSVSSSASWTPLGFSTKFSTCRSTAKRPLIVAFKADKSNETALVAPHEQIPLPIETT 60

Query: 1684 KENHKRVRSVTKPSKGVHVASVAEASPYAVELDLNEAAAKLESIFKLSPSTDVLDAENID 1505
            KE  +R +S  K S     A   E SP  + +D NEAAAKLE+I+KLSP TD  D E+++
Sbjct: 61   KEKKRRGKS--KKSSDRLKAVRTEVSPCTLGVDYNEAAAKLENIYKLSPGTDTSDVEDVN 118

Query: 1504 QFVXXXXXXXXKSPEVDEKKTKKTDAIVVRNKNGKQKRLSLAKRIEMKQSKDSKEEKEVT 1325
              +        K+ E +++   +T  I+VRN+  K KRLSL KRI ++   D   EK VT
Sbjct: 119  GVIRRCRQRKRKTSECEKEDDGRTSKIIVRNQAKKAKRLSLQKRIALRIKSD---EKLVT 175

Query: 1324 STERKRTSKNEDEKIDELVREYSSSTDLVSLDWKKMKIPPVLPSTEHTWLFKSMEPMKAL 1145
            S  +++  KNE+EKIDELVREYSSSTDL SLDWKKMKIPPVL S EH WLFK M+PMKA 
Sbjct: 176  SVGKRKGRKNENEKIDELVREYSSSTDLASLDWKKMKIPPVLTSAEHAWLFKLMQPMKAS 235

Query: 1144 NQVKENLRTELGRDPTDNELGETMNMTVVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKY 965
             QVKE+L+   GR+PT+ EL E  +M V+QVR+ +EVG AARNKLIKHNLRLVLFV+NKY
Sbjct: 236  LQVKEHLQENSGREPTEGELAEATDMDVLQVRKQIEVGRAARNKLIKHNLRLVLFVINKY 295

Query: 964  FQDFTNGPRFQDLCQAGVKGLIIAIDRFEPRRKFRLSTYALFWIRHAIIRSMTVSSFTRV 785
            FQD+ NGPR+QDLCQAGVKGL+ AIDRFEP+R+FRLSTY LFWIRHAIIRSMT+SSFTRV
Sbjct: 296  FQDYANGPRYQDLCQAGVKGLMTAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRV 355

Query: 784  SFGLESVRYEIHKAKLELMFELKRMPTEEEIFERVGISAERYQDVMRASNSVASLHSRNQ 605
            SFGLES+R EI KAKLEL F+L R PT EEI E+VGIS ERY +VMRAS  V SLHSR++
Sbjct: 356  SFGLESIRSEIQKAKLELWFQLLRKPTGEEIIEKVGISIERYHEVMRASKPVLSLHSRHK 415

Query: 604  VTQEELINGIVDVNGVGSDDQIQPXXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTL 425
             TQEELI+G+ DVN  G DD+ Q              LKPKESLV+RQR+GLDGKGDRTL
Sbjct: 416  TTQEELISGVADVN--GGDDRRQSALLRLALDDVLDSLKPKESLVVRQRFGLDGKGDRTL 473

Query: 424  GEIAGNLSISREMVRKHEMKALMKLKHPTRVDYLQRHI 311
            GEIAGNL+ISREMVRKHE KALMKLKHPTRVDYL R++
Sbjct: 474  GEIAGNLNISREMVRKHEAKALMKLKHPTRVDYLCRYV 511


>ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citrus clementina]
            gi|567858878|ref|XP_006422122.1| hypothetical protein
            CICLE_v10004760mg [Citrus clementina]
            gi|568874930|ref|XP_006490565.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X1 [Citrus
            sinensis] gi|568874932|ref|XP_006490566.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Citrus
            sinensis] gi|568874934|ref|XP_006490567.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X3 [Citrus
            sinensis] gi|557523994|gb|ESR35361.1| hypothetical
            protein CICLE_v10004760mg [Citrus clementina]
            gi|557523995|gb|ESR35362.1| hypothetical protein
            CICLE_v10004760mg [Citrus clementina]
          Length = 513

 Score =  580 bits (1495), Expect = e-163
 Identities = 311/495 (62%), Positives = 371/495 (74%)
 Frame = -3

Query: 1795 HQYRIKGPLILGFKVDKNKKSTLVAVSEPSRLKLETKKENHKRVRSVTKPSKGVHVASVA 1616
            H+   K PLI+ FK DK+    L +  E   L +ET K + KR  +  K  + V      
Sbjct: 22   HRSTSKRPLIVAFKADKSNNQALFSPQEQIPLPIETPKRHQKRRENSRKRLERVKGVFSD 81

Query: 1615 EASPYAVELDLNEAAAKLESIFKLSPSTDVLDAENIDQFVXXXXXXXXKSPEVDEKKTKK 1436
            EASP  +++D NEAAAKLE+I+KLSP+    + +  D  V        +  EV++K    
Sbjct: 82   EASPCTLDVDYNEAAAKLENIYKLSPAVTTSEVKYADGVVKRGRQRRKRIGEVEKKSDDV 141

Query: 1435 TDAIVVRNKNGKQKRLSLAKRIEMKQSKDSKEEKEVTSTERKRTSKNEDEKIDELVREYS 1256
            +   VVRN+  + KRLSL KRIE+++++D   EK VT T RK  SK+E EKI++LVREYS
Sbjct: 142  SGKPVVRNQVKRPKRLSLDKRIELRKNED---EKVVTKT-RKTDSKDEHEKIEKLVREYS 197

Query: 1255 SSTDLVSLDWKKMKIPPVLPSTEHTWLFKSMEPMKALNQVKENLRTELGRDPTDNELGET 1076
             STDLVSLDWKKMKIPPVL STEHTWLFK M+PMK   QVKE L+ +LGR+PTD EL E 
Sbjct: 198  YSTDLVSLDWKKMKIPPVLSSTEHTWLFKLMQPMKVFVQVKEQLQKDLGREPTDVELAEA 257

Query: 1075 MNMTVVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKYFQDFTNGPRFQDLCQAGVKGLII 896
             NM+  QV++ LEVG AARNKLIKHNLRLVLFV+ KYFQDF NGPRFQDLCQAGVKGLI 
Sbjct: 258  TNMSAAQVKKCLEVGRAARNKLIKHNLRLVLFVIKKYFQDFANGPRFQDLCQAGVKGLIT 317

Query: 895  AIDRFEPRRKFRLSTYALFWIRHAIIRSMTVSSFTRVSFGLESVRYEIHKAKLELMFELK 716
            AIDRFEP+R+FRLSTY LFWIRHAIIRSMTVSSFTRV FGLESVR EI +AKLEL+FELK
Sbjct: 318  AIDRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSFTRVPFGLESVRGEIQRAKLELLFELK 377

Query: 715  RMPTEEEIFERVGISAERYQDVMRASNSVASLHSRNQVTQEELINGIVDVNGVGSDDQIQ 536
            R+PT+EEI + V IS ERY++VM+AS  + SLHSR+ VTQEE INGI DV+GV +++Q Q
Sbjct: 378  RVPTDEEIIQGVNISPERYREVMKASKPILSLHSRHGVTQEEFINGITDVDGVENENQRQ 437

Query: 535  PXXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLSISREMVRKHEMKALM 356
            P             LKPKESLVIRQR+GLDGKGDRTLGEIAGNL+ISREMVRKHE+K LM
Sbjct: 438  PALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDRTLGEIAGNLNISREMVRKHEVKGLM 497

Query: 355  KLKHPTRVDYLQRHI 311
            KLKHPTRVDYL++H+
Sbjct: 498  KLKHPTRVDYLRQHM 512


>ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 515

 Score =  578 bits (1489), Expect = e-162
 Identities = 311/521 (59%), Positives = 378/521 (72%), Gaps = 3/521 (0%)
 Frame = -3

Query: 1864 MGVVTVXXXXXXXXXXXXXXSTVHQYRIKGPLILGFKVDKNKKSTLVAVSEPSRLKLETK 1685
            MGVVTV               + H   +K P I+ FK DK+  +TLV+  E   L +E+ 
Sbjct: 1    MGVVTVSSAAARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60

Query: 1684 KENHKRVRSVTKPSKGVHVASVAEASPYAVELDLNEAAAKLESIFKLSPSTDVLDAENID 1505
                KR  + +KP K V    + EA+P +++LD NEAAAKLE+IFKLSP T+  D E  D
Sbjct: 61   NRRKKRSGNTSKPLKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKD 120

Query: 1504 QFVXXXXXXXXKSPEVDEKKTKKTDAIVVRNKNGKQKRLSLAKRIEMK---QSKDSKEEK 1334
                       +  +  +K   +    +VRN+  + KRL L KRI +K   ++K +KE K
Sbjct: 121  -------GRSKRGQKRSKKSANRPGDGIVRNQTKRIKRLDLDKRIALKNKRKAKRNKEGK 173

Query: 1333 EVTSTERKRTSKNEDEKIDELVREYSSSTDLVSLDWKKMKIPPVLPSTEHTWLFKSMEPM 1154
             V S  +++ +KNED++ID LVR+YS+STDLVSLDWKKMKIPPVLPS+EHT LFK ++PM
Sbjct: 174  AVPSLRKQKETKNEDDEIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPM 233

Query: 1153 KALNQVKENLRTELGRDPTDNELGETMNMTVVQVRRHLEVGHAARNKLIKHNLRLVLFVM 974
            KAL +V+E L+  LGR+PT+ EL    NM V+QVRR LEVG AARNKLIKHNLRLVLFV+
Sbjct: 234  KALVEVQEELQKGLGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVI 293

Query: 973  NKYFQDFTNGPRFQDLCQAGVKGLIIAIDRFEPRRKFRLSTYALFWIRHAIIRSMTVSSF 794
            NKYF+DF +GP+FQDLCQAGVKGLI AIDRFEP+RKFRLSTYALFWIRHAIIRSMT+SSF
Sbjct: 294  NKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSF 353

Query: 793  TRVSFGLESVRYEIHKAKLELMFELKRMPTEEEIFERVGISAERYQDVMRASNSVASLHS 614
            TRVSFGL+SVR EI +AKLEL+ EL R+PTE EI  +VGIS ERY +VMRA+  V SLHS
Sbjct: 354  TRVSFGLDSVRVEIQRAKLELLCELHRLPTEGEITAKVGISQERYLEVMRATKPVYSLHS 413

Query: 613  RNQVTQEELINGIVDVNGVGSDDQIQPXXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGD 434
            R+  T EELINGI DV G G D++ QP             LKPKESLVIRQRYGLDGKG+
Sbjct: 414  RHSTTSEELINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGN 473

Query: 433  RTLGEIAGNLSISREMVRKHEMKALMKLKHPTRVDYLQRHI 311
            RTLGEIAGNL+ISREMVRKHE+KALMKLKHP RVDYL+R++
Sbjct: 474  RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYL 514


>ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 514

 Score =  568 bits (1463), Expect = e-159
 Identities = 309/523 (59%), Positives = 374/523 (71%), Gaps = 5/523 (0%)
 Frame = -3

Query: 1864 MGVVTVXXXXXXXXXXXXXXSTVHQYRIKGPLILGFKVDKNKKSTLVAVSEPSRLKLETK 1685
            MGVVTV               + H   +K P I+ FK DK+  +TLV+  E   L +E+ 
Sbjct: 1    MGVVTVSSAAARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60

Query: 1684 KENHKRVRSVTKPSKGVHVASVAEASPYAVELDLNEAAAKLESIFKLSPSTDVLDAENID 1505
                KR  + +KP K V    + EA+P +++LD NEAAAKLE+IFKLSP T+  D E  D
Sbjct: 61   NRRKKRSGNTSKPLKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKD 120

Query: 1504 QFVXXXXXXXXKSPEVDEKKTKKTDAIVVRNKNGKQKRLSLAKRIEMKQSKDSKEEKEVT 1325
                       +  +  +K   +    +VRN+  + KRL L KRI +K   + KE K V 
Sbjct: 121  -------GRSKRGQKRSKKSANRPGDGIVRNQTKRIKRLDLDKRIALK---NKKEGKAVA 170

Query: 1324 STERKRTSKNE-----DEKIDELVREYSSSTDLVSLDWKKMKIPPVLPSTEHTWLFKSME 1160
               +++ +KNE     D++ID LVR+YS+STDLVSLDWKKMKIPPVLPS+EHT LFK ++
Sbjct: 171  LLRKQKDTKNEADEIDDDEIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQ 230

Query: 1159 PMKALNQVKENLRTELGRDPTDNELGETMNMTVVQVRRHLEVGHAARNKLIKHNLRLVLF 980
            PMKAL +V+E L+  LGR+PT+ EL    NM V+QVRR LEVG AARNKLIKHNLRLVLF
Sbjct: 231  PMKALVEVQEELQKGLGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLF 290

Query: 979  VMNKYFQDFTNGPRFQDLCQAGVKGLIIAIDRFEPRRKFRLSTYALFWIRHAIIRSMTVS 800
            V+NKYF+DF +GP+FQDLCQAGVKGLI AIDRFEP+RKFRLSTYALFWIRHAIIRSMT+S
Sbjct: 291  VINKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLS 350

Query: 799  SFTRVSFGLESVRYEIHKAKLELMFELKRMPTEEEIFERVGISAERYQDVMRASNSVASL 620
            SFTRVSFGL+SVR EI +AKLEL+ EL R+PTE EI  +VGIS ERY +VMRA+  V SL
Sbjct: 351  SFTRVSFGLDSVRVEIQRAKLELLCELHRLPTEGEITAKVGISQERYLEVMRATKPVYSL 410

Query: 619  HSRNQVTQEELINGIVDVNGVGSDDQIQPXXXXXXXXXXXXXLKPKESLVIRQRYGLDGK 440
            HSR+  T EELINGI DV G G D++ QP             LKPKESLVIRQRYGLDGK
Sbjct: 411  HSRHSTTSEELINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGK 470

Query: 439  GDRTLGEIAGNLSISREMVRKHEMKALMKLKHPTRVDYLQRHI 311
            G+RTLGEIAGNL+ISREMVRKHE+KALMKLKHP RVDYL+R++
Sbjct: 471  GNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYL 513


>ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223547495|gb|EEF48990.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 501

 Score =  568 bits (1463), Expect = e-159
 Identities = 308/518 (59%), Positives = 375/518 (72%)
 Frame = -3

Query: 1864 MGVVTVXXXXXXXXXXXXXXSTVHQYRIKGPLILGFKVDKNKKSTLVAVSEPSRLKLETK 1685
            MGVVT                + ++  +K  L++ FK DK     LV   E + L +ET 
Sbjct: 1    MGVVTASSSAARTPLGLSLKFSTYRSTVKRSLVVAFKEDKANDIILVPPRERTPLPIETS 60

Query: 1684 KENHKRVRSVTKPSKGVHVASVAEASPYAVELDLNEAAAKLESIFKLSPSTDVLDAENID 1505
            K   +R ++  + S G             +E+D NEAAAKLE+I+KLSP+TD  D + I+
Sbjct: 61   KGKKRRGKTNREVSSGT------------LEVDYNEAAAKLENIYKLSPATDTSDVD-IN 107

Query: 1504 QFVXXXXXXXXKSPEVDEKKTKKTDAIVVRNKNGKQKRLSLAKRIEMKQSKDSKEEKEVT 1325
              +        K+ E DEK   +T   +VRN+  K KRLSL KRI +K+++   EE+ V 
Sbjct: 108  GLIRKGRQRKRKTGEGDEKAENRTSRTIVRNRAKKTKRLSLDKRIALKKNE---EEEVVG 164

Query: 1324 STERKRTSKNEDEKIDELVREYSSSTDLVSLDWKKMKIPPVLPSTEHTWLFKSMEPMKAL 1145
               +K+ SK+++EKI+ELVR YS+ST+LVSLDW+KMKIPPVLPSTEH WLFK M+PMK L
Sbjct: 165  PIRKKKDSKDDNEKIEELVRTYSASTNLVSLDWRKMKIPPVLPSTEHAWLFKLMQPMKTL 224

Query: 1144 NQVKENLRTELGRDPTDNELGETMNMTVVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKY 965
              VK +L+  LGRDPTD EL E  NM V +VR+ LEVG AARNKLIKHNLRLV+FVMNKY
Sbjct: 225  LPVKADLQKNLGRDPTDGELAEATNMNVEKVRKQLEVGRAARNKLIKHNLRLVMFVMNKY 284

Query: 964  FQDFTNGPRFQDLCQAGVKGLIIAIDRFEPRRKFRLSTYALFWIRHAIIRSMTVSSFTRV 785
            FQDF NGPRFQDLCQAGVKGLI AIDRFEP+R+F+LSTY+LFWIRHAIIRSMT+SSFT+V
Sbjct: 285  FQDFANGPRFQDLCQAGVKGLITAIDRFEPQRRFQLSTYSLFWIRHAIIRSMTLSSFTKV 344

Query: 784  SFGLESVRYEIHKAKLELMFELKRMPTEEEIFERVGISAERYQDVMRASNSVASLHSRNQ 605
            SFGLESVR EI KAKLEL+ EL+R PTEEEI ERVGISAERY +V+RA+    SLH+R+ 
Sbjct: 345  SFGLESVRTEIQKAKLELLIELQRRPTEEEIIERVGISAERYHEVIRAAKPALSLHARHA 404

Query: 604  VTQEELINGIVDVNGVGSDDQIQPXXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTL 425
            VTQEE INGI D++  G D++ QP             LKPKESLVIRQRYGLDGKGDRTL
Sbjct: 405  VTQEEFINGITDID--GGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTL 462

Query: 424  GEIAGNLSISREMVRKHEMKALMKLKHPTRVDYLQRHI 311
            GEIAGNL+ISREMVRK+E+KALMKLKHP RVDYL+R++
Sbjct: 463  GEIAGNLNISREMVRKYEVKALMKLKHPARVDYLRRYV 500


>ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X1 [Glycine max]
            gi|571496981|ref|XP_006593757.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Glycine max]
          Length = 512

 Score =  565 bits (1455), Expect = e-158
 Identities = 298/518 (57%), Positives = 377/518 (72%)
 Frame = -3

Query: 1864 MGVVTVXXXXXXXXXXXXXXSTVHQYRIKGPLILGFKVDKNKKSTLVAVSEPSRLKLETK 1685
            MGV+TV                 HQ   K P+IL FK +K+ K+TLV+  E   L LET 
Sbjct: 1    MGVITVSTSAARTPLRLNTRLISHQQVHKRPIILAFKGNKSNKTTLVSPQEKIPLPLETA 60

Query: 1684 KENHKRVRSVTKPSKGVHVASVAEASPYAVELDLNEAAAKLESIFKLSPSTDVLDAENID 1505
            K++ KRV   ++  K V   S  E SP  +++D NEAAAKLE+I+KLSP +D  + E+ID
Sbjct: 61   KKHQKRVGKTSESLKRVRAVSTVETSPCTLDVDYNEAAAKLENIYKLSPVSDTCNVEDID 120

Query: 1504 QFVXXXXXXXXKSPEVDEKKTKKTDAIVVRNKNGKQKRLSLAKRIEMKQSKDSKEEKEVT 1325
              +           +V E++       VVRN+N K KRLSL KRI +K   ++ +E+ + 
Sbjct: 121  SKIERVLRRRK---KVSEERDDGNCDNVVRNQNKKAKRLSLDKRIALK---NNAKEEVID 174

Query: 1324 STERKRTSKNEDEKIDELVREYSSSTDLVSLDWKKMKIPPVLPSTEHTWLFKSMEPMKAL 1145
             T++KR  KN  + ID L+R+YS+STDLVS+DWKKMKIPPVLPS+EH WLFK M+PMKAL
Sbjct: 175  QTQKKRNVKNRVQNIDVLIRDYSASTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKAL 234

Query: 1144 NQVKENLRTELGRDPTDNELGETMNMTVVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKY 965
             Q KE+L+ E+ ++ T  EL +  NM+++QVR+ +EVG AARNKLIKHNLRLVLFV+NKY
Sbjct: 235  LQAKEDLK-EVDKEITGGELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVINKY 293

Query: 964  FQDFTNGPRFQDLCQAGVKGLIIAIDRFEPRRKFRLSTYALFWIRHAIIRSMTVSSFTRV 785
            FQDF +GPRFQDLCQAGVKGLI AIDRFEP+R+ +LSTY+LFWIRH+I+RS+T+SSFTRV
Sbjct: 294  FQDFASGPRFQDLCQAGVKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRV 353

Query: 784  SFGLESVRYEIHKAKLELMFELKRMPTEEEIFERVGISAERYQDVMRASNSVASLHSRNQ 605
             FGLE VR +I + KL+L FEL+R PTEEE+ ER+GIS ERY +VM+AS  + SLHSR+ 
Sbjct: 354  PFGLERVRVDIQRTKLKLTFELQRSPTEEELVERIGISLERYHEVMKASKPILSLHSRHI 413

Query: 604  VTQEELINGIVDVNGVGSDDQIQPXXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTL 425
             TQEE INGI DV+GV  D++ Q              LKPKESLVIRQRYGLDGKGDRTL
Sbjct: 414  TTQEEYINGITDVDGVNGDNRRQLAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTL 473

Query: 424  GEIAGNLSISREMVRKHEMKALMKLKHPTRVDYLQRHI 311
            GEIAGNL+ISRE+VRKHE+KALMKLKHP R+DYL+R++
Sbjct: 474  GEIAGNLNISREIVRKHEVKALMKLKHPARLDYLRRYV 511


>ref|XP_006376620.1| RNA polymerase sigma subunit SigE family protein [Populus
            trichocarpa] gi|550326141|gb|ERP54417.1| RNA polymerase
            sigma subunit SigE family protein [Populus trichocarpa]
          Length = 512

 Score =  563 bits (1452), Expect = e-158
 Identities = 309/518 (59%), Positives = 369/518 (71%)
 Frame = -3

Query: 1864 MGVVTVXXXXXXXXXXXXXXSTVHQYRIKGPLILGFKVDKNKKSTLVAVSEPSRLKLETK 1685
            MGVV+V               + +    K PLI+ FK +K+  ++LVA  E   L +ET 
Sbjct: 1    MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKANKSNNTSLVAPHEQIPLPVETT 60

Query: 1684 KENHKRVRSVTKPSKGVHVASVAEASPYAVELDLNEAAAKLESIFKLSPSTDVLDAENID 1505
            K   +  +S  K S     A   E SP  + +D NEAAAKLE+I+KLSP TD  D E+  
Sbjct: 61   KGKKRLGKS--KKSSNRLKAVRTEVSPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDAS 118

Query: 1504 QFVXXXXXXXXKSPEVDEKKTKKTDAIVVRNKNGKQKRLSLAKRIEMKQSKDSKEEKEVT 1325
              +        K  E D++   +T  I+VRN+  K KRLSL KRI ++      EEK V+
Sbjct: 119  GVIRRGRQRKRKISEGDKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKN---EEKLVS 175

Query: 1324 STERKRTSKNEDEKIDELVREYSSSTDLVSLDWKKMKIPPVLPSTEHTWLFKSMEPMKAL 1145
            S  +++  KNE+EKID+LVREYS+STDLVSLDWKKMKIPPVL S+EH WLFK M+PMKAL
Sbjct: 176  SAGKRKDRKNENEKIDDLVREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKAL 235

Query: 1144 NQVKENLRTELGRDPTDNELGETMNMTVVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKY 965
             QVKE+L+  LG +PTD EL +  NM V+QVR+ + VG AARNKLIKHNLRLVLFV+ KY
Sbjct: 236  LQVKEHLQENLGGEPTDVELAKATNMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKY 295

Query: 964  FQDFTNGPRFQDLCQAGVKGLIIAIDRFEPRRKFRLSTYALFWIRHAIIRSMTVSSFTRV 785
            FQDF NG +FQD CQAGVKGLI AIDRFEP+R+FRLSTY LFWIRHAIIRSMT+SSFTRV
Sbjct: 296  FQDFANGTKFQDFCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRV 355

Query: 784  SFGLESVRYEIHKAKLELMFELKRMPTEEEIFERVGISAERYQDVMRASNSVASLHSRNQ 605
            SFGLES+R EI KAKLEL F+LKR P E+EI E+V IS ERY +V RAS  V SLHSR++
Sbjct: 356  SFGLESIRSEIQKAKLELWFQLKRQPMEDEIIEKVRISPERYHEVTRASKPVLSLHSRHK 415

Query: 604  VTQEELINGIVDVNGVGSDDQIQPXXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTL 425
             TQEE I GI DV+  G DD+ Q              LKPKESLV+RQRYGLDGKGDRTL
Sbjct: 416  TTQEEFIGGIADVD--GGDDRRQSALLRLALDDVLDSLKPKESLVVRQRYGLDGKGDRTL 473

Query: 424  GEIAGNLSISREMVRKHEMKALMKLKHPTRVDYLQRHI 311
            GEIAGNL+ISREMVRKHE+KALMKLKHPTRVDYL+R++
Sbjct: 474  GEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYV 511


>ref|XP_002333134.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  563 bits (1452), Expect = e-158
 Identities = 309/518 (59%), Positives = 369/518 (71%)
 Frame = -3

Query: 1864 MGVVTVXXXXXXXXXXXXXXSTVHQYRIKGPLILGFKVDKNKKSTLVAVSEPSRLKLETK 1685
            MGVV+V               + +    K PLI+ FK DK+  ++LVA  E   L +ET 
Sbjct: 1    MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKADKSNNTSLVAPHEQIPLPVETT 60

Query: 1684 KENHKRVRSVTKPSKGVHVASVAEASPYAVELDLNEAAAKLESIFKLSPSTDVLDAENID 1505
            K   +  +S  K S     A   E SP  + +D NEAAAKLE+I+KLSP TD  D E+  
Sbjct: 61   KGKKRLGKS--KKSSNRLKAVRTEVSPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDAS 118

Query: 1504 QFVXXXXXXXXKSPEVDEKKTKKTDAIVVRNKNGKQKRLSLAKRIEMKQSKDSKEEKEVT 1325
              +        K  E  ++   +T  I+VRN+  K KRLSL KRI ++      EEK V+
Sbjct: 119  GVIRRGRQRKRKISEGGKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKN---EEKLVS 175

Query: 1324 STERKRTSKNEDEKIDELVREYSSSTDLVSLDWKKMKIPPVLPSTEHTWLFKSMEPMKAL 1145
            S  +++  KNE+EKID+LVREYS+STDLVSLDWKKMKIPPVL S+EH WLFK M+PMKAL
Sbjct: 176  SAGKRKDRKNENEKIDDLVREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKAL 235

Query: 1144 NQVKENLRTELGRDPTDNELGETMNMTVVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKY 965
             QVKE+L+  LG +PTD EL + +NM V+QVR+ + VG AARNKLIKHNLRLVLFV+ KY
Sbjct: 236  LQVKEHLQENLGGEPTDVELAKAINMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKY 295

Query: 964  FQDFTNGPRFQDLCQAGVKGLIIAIDRFEPRRKFRLSTYALFWIRHAIIRSMTVSSFTRV 785
            FQDF NG +FQD CQAGVKGLI AIDRFEP+R+FRLSTY LFWIRHAIIRSMT+SSFTRV
Sbjct: 296  FQDFANGTKFQDFCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRV 355

Query: 784  SFGLESVRYEIHKAKLELMFELKRMPTEEEIFERVGISAERYQDVMRASNSVASLHSRNQ 605
            SFGLES+R EI KAKLEL F+LKR P E+EI E+V IS ERY +V RAS  V SLHSR++
Sbjct: 356  SFGLESIRSEIQKAKLELWFQLKRQPMEDEIIEKVRISPERYHEVTRASKPVLSLHSRHK 415

Query: 604  VTQEELINGIVDVNGVGSDDQIQPXXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTL 425
             TQEE I GI DV+  G DD+ Q              LKPKESLV+RQRYGLDGKGDRTL
Sbjct: 416  TTQEEFIGGIADVD--GGDDRRQSALLRLALDDVLDSLKPKESLVVRQRYGLDGKGDRTL 473

Query: 424  GEIAGNLSISREMVRKHEMKALMKLKHPTRVDYLQRHI 311
            GEIAGNL+ISREMVRKHE+KALMKLKHPTRVDYL+R++
Sbjct: 474  GEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYV 511


>ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glycine max]
            gi|382365028|dbj|BAM05477.1| sigma-like factor 5A
            [Glycine max]
          Length = 512

 Score =  558 bits (1437), Expect = e-156
 Identities = 297/518 (57%), Positives = 376/518 (72%)
 Frame = -3

Query: 1864 MGVVTVXXXXXXXXXXXXXXSTVHQYRIKGPLILGFKVDKNKKSTLVAVSEPSRLKLETK 1685
            MGVVTV               T HQ   K PLI+ FK +K  K+ LV+  E   L +ET 
Sbjct: 1    MGVVTVSTLAARTPLRLNTRLTSHQQVHKRPLIVAFKGNKLNKAALVSPQEQIPLPIETA 60

Query: 1684 KENHKRVRSVTKPSKGVHVASVAEASPYAVELDLNEAAAKLESIFKLSPSTDVLDAENID 1505
            K++ KRV   ++  K V   S+ E SP  +++D NEAAAKLE+I+KLSP +D  + E+ID
Sbjct: 61   KKDQKRVGKTSESLKRVRAVSIVETSPCTLDMDYNEAAAKLENIYKLSPVSDTCNMEDID 120

Query: 1504 QFVXXXXXXXXKSPEVDEKKTKKTDAIVVRNKNGKQKRLSLAKRIEMKQSKDSKEEKEVT 1325
              V           +V  +   +   IVVRN+N K KRLSL KRI +K   ++ +E+ + 
Sbjct: 121  SKVERVLWRRR---KVGNEHDDENCDIVVRNQNKKAKRLSLDKRITLK---NNAKEEVID 174

Query: 1324 STERKRTSKNEDEKIDELVREYSSSTDLVSLDWKKMKIPPVLPSTEHTWLFKSMEPMKAL 1145
             T++ R  KN  + ID L+R+YS+STDLVS+DWKKMKIP VLPS+EH WLFK M+PMKAL
Sbjct: 175  QTQKIRNVKNRVQNIDVLIRDYSASTDLVSMDWKKMKIPAVLPSSEHAWLFKLMQPMKAL 234

Query: 1144 NQVKENLRTELGRDPTDNELGETMNMTVVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKY 965
             Q KE+L++ +G++ TD EL +  NM+++QVR+ +EVG AARNKLIKHNLRLVLFV++KY
Sbjct: 235  LQAKEDLQS-VGKEITDGELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVISKY 293

Query: 964  FQDFTNGPRFQDLCQAGVKGLIIAIDRFEPRRKFRLSTYALFWIRHAIIRSMTVSSFTRV 785
            FQDF +G RFQDLCQAGVKGLI AIDRFEP+R+ +LSTY+LFWIRH+I+RS+T+SSFTRV
Sbjct: 294  FQDFASGRRFQDLCQAGVKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRV 353

Query: 784  SFGLESVRYEIHKAKLELMFELKRMPTEEEIFERVGISAERYQDVMRASNSVASLHSRNQ 605
             FGLE VR +I + KL+L FEL+R PTEEE+ ER+GIS ERY +VM+AS  + SLHSR+ 
Sbjct: 354  PFGLERVRVDIQRTKLKLTFELQRSPTEEELVERIGISPERYYEVMKASKPILSLHSRHI 413

Query: 604  VTQEELINGIVDVNGVGSDDQIQPXXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTL 425
             TQEE INGI DV+GV  D++ Q              LKPKESLVIRQRYGLDGKGDRTL
Sbjct: 414  TTQEEYINGITDVDGVNGDNRRQLAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTL 473

Query: 424  GEIAGNLSISREMVRKHEMKALMKLKHPTRVDYLQRHI 311
            GEIAGNL+ISREMVRKHE+KALMKLKHP R+DYL+R++
Sbjct: 474  GEIAGNLNISREMVRKHEVKALMKLKHPARLDYLRRYV 511


>ref|XP_006578934.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Glycine max]
          Length = 509

 Score =  552 bits (1422), Expect = e-154
 Identities = 302/520 (58%), Positives = 371/520 (71%), Gaps = 2/520 (0%)
 Frame = -3

Query: 1864 MGVVTVXXXXXXXXXXXXXXSTVHQYRIKGPLILGFKVDKNKKSTLVAVSEPSRLKLET- 1688
            MGVVTV               + H  R+K PLI+ FK DK+  S LVA  E   + +ET 
Sbjct: 1    MGVVTVSGSASRTPLGFNTKFSTH--RLKRPLIVAFKGDKHNDSALVATQEKIPVPVETA 58

Query: 1687 KKENHKRVRSVTKPSKGVHVASVAEASPYAVELDLNEAAAKLESIFKLSPSTDVLDAENI 1508
            KK   KR+    K  K        E+SP ++++D NEAAA LE+I+KLSP++   +AE I
Sbjct: 59   KKTQKKRIGKSNKLPK-------RESSPSSMDVDYNEAAAMLENIYKLSPASHTGNAECI 111

Query: 1507 DQFVXXXXXXXXKSPEVDEKKTKKTDAIVVR-NKNGKQKRLSLAKRIEMKQSKDSKEEKE 1331
            D  +        K  +  E+K  K D +V R NKN K KRL+L +RI +K   ++K   E
Sbjct: 112  DDKIKRVSRRGKKVVDESEEKELKGDRVVRRQNKNKKAKRLTLDQRISLK---NNKRGDE 168

Query: 1330 VTSTERKRTSKNEDEKIDELVREYSSSTDLVSLDWKKMKIPPVLPSTEHTWLFKSMEPMK 1151
            V  T +KR  +N  EKI+EL+REYS S D +S+DWK+M+IPPVL S+EH WLFK M+PMK
Sbjct: 169  VIPTRKKRNFRNRIEKIEELIREYSVSNDFISMDWKRMRIPPVLSSSEHAWLFKLMQPMK 228

Query: 1150 ALNQVKENLRTELGRDPTDNELGETMNMTVVQVRRHLEVGHAARNKLIKHNLRLVLFVMN 971
            AL QVKE+L+ EL R+P D EL +  NM++ QV++ ++VG AARNKLIKHNLRLVLFV+N
Sbjct: 229  ALLQVKEDLQKELAREPADGELADATNMSITQVKKAIDVGQAARNKLIKHNLRLVLFVIN 288

Query: 970  KYFQDFTNGPRFQDLCQAGVKGLIIAIDRFEPRRKFRLSTYALFWIRHAIIRSMTVSSFT 791
            KYF DF +GPRFQDLCQAGVKGLI AIDRFEP R+FRLSTY+LFWIRHAIIRSMT+SSF 
Sbjct: 289  KYFTDFASGPRFQDLCQAGVKGLITAIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLSSFI 348

Query: 790  RVSFGLESVRYEIHKAKLELMFELKRMPTEEEIFERVGISAERYQDVMRASNSVASLHSR 611
            RV FGLESVR EI KAK EL F+L+R PTEEEI ERV IS ERY D+++AS S+ SL+SR
Sbjct: 349  RVPFGLESVRAEIQKAKTELTFKLQRSPTEEEIIERVHISPERYHDIIKASKSILSLNSR 408

Query: 610  NQVTQEELINGIVDVNGVGSDDQIQPXXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDR 431
            +  TQEE INGIVD +GV  D++ QP             LKPKESLVIRQR+GLDGKGDR
Sbjct: 409  HTTTQEEFINGIVDDDGVNGDNRKQPALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDR 468

Query: 430  TLGEIAGNLSISREMVRKHEMKALMKLKHPTRVDYLQRHI 311
            TLGEIAGNL+ISREMVRKHE+KALMKL H  R+DYL+R++
Sbjct: 469  TLGEIAGNLNISREMVRKHEVKALMKLNHSARLDYLRRYV 508


>ref|XP_006581623.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Glycine max]
          Length = 507

 Score =  551 bits (1421), Expect = e-154
 Identities = 300/494 (60%), Positives = 366/494 (74%), Gaps = 2/494 (0%)
 Frame = -3

Query: 1786 RIKGPLILGFKVDKNKKSTLVAVSEPSRLKLET-KKENHKRVRSVTKPSKGVHVASVAEA 1610
            R+K PLI+ FK DK+  S LVA  E   + +ET KK   KR+    K  K        E+
Sbjct: 25   RLKRPLIVAFKGDKHNDSALVATQEKIPVPVETAKKTQKKRIGKTNKLPK-------RES 77

Query: 1609 SPYAVELDLNEAAAKLESIFKLSPSTDVLDAENIDQFVXXXXXXXXKSPEVDEKKTKKTD 1430
            SP ++++D NEAAA LE+++KLSP++D  +AE ID  +        K  +  E+K  K D
Sbjct: 78   SPSSMDVDYNEAAAMLENLYKLSPASD--NAECIDGKIKRVSRRGKKVVDESEEKELKGD 135

Query: 1429 AIVV-RNKNGKQKRLSLAKRIEMKQSKDSKEEKEVTSTERKRTSKNEDEKIDELVREYSS 1253
             +V  +NKN K KRL+L +RI +K +K   E   V  T +KR   N+ EKI+EL+REYS 
Sbjct: 136  WVVRNQNKNKKPKRLNLDQRISLKNNKSGDE---VIPTRKKRNVGNKIEKIEELIREYSV 192

Query: 1252 STDLVSLDWKKMKIPPVLPSTEHTWLFKSMEPMKALNQVKENLRTELGRDPTDNELGETM 1073
            STD VS+DWK+M+IPPVL S+EH WLFK M+PMKAL QVKE+L+ EL R+P D EL +  
Sbjct: 193  STDFVSMDWKRMRIPPVLSSSEHAWLFKLMQPMKALLQVKEDLQQELTREPADGELADAT 252

Query: 1072 NMTVVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKYFQDFTNGPRFQDLCQAGVKGLIIA 893
            NM++ QVR+ ++VG AARNKLIKHNLRLVLFV+NKYF DF +GPRFQDLCQAGVKGLI A
Sbjct: 253  NMSITQVRKAIDVGQAARNKLIKHNLRLVLFVINKYFTDFASGPRFQDLCQAGVKGLITA 312

Query: 892  IDRFEPRRKFRLSTYALFWIRHAIIRSMTVSSFTRVSFGLESVRYEIHKAKLELMFELKR 713
            IDRFEP R+FRLSTY+LFWIRHAIIRSMT+S+FTRV FGLESVR EI KAK EL FEL+R
Sbjct: 313  IDRFEPNRRFRLSTYSLFWIRHAIIRSMTLSNFTRVPFGLESVRAEIQKAKTELTFELQR 372

Query: 712  MPTEEEIFERVGISAERYQDVMRASNSVASLHSRNQVTQEELINGIVDVNGVGSDDQIQP 533
             PTEEEI ERV IS ERY DV++AS S+ SL+SR+  TQEE INGIVD +GV  D++ QP
Sbjct: 373  SPTEEEIIERVHISPERYHDVIKASKSILSLNSRHTTTQEEFINGIVDDDGVNGDNRKQP 432

Query: 532  XXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLSISREMVRKHEMKALMK 353
                         LKPKESLVIRQR+GLDGKGDRTLGEIAGNL+ISREMVRKHE+KALMK
Sbjct: 433  ALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMK 492

Query: 352  LKHPTRVDYLQRHI 311
            LKH  R+DYL+R++
Sbjct: 493  LKHSARLDYLRRYV 506


>ref|NP_001276145.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
            [Glycine max] gi|382365034|dbj|BAM05478.1| sigma-like
            factor 5B [Glycine max]
          Length = 507

 Score =  549 bits (1415), Expect = e-153
 Identities = 299/494 (60%), Positives = 365/494 (73%), Gaps = 2/494 (0%)
 Frame = -3

Query: 1786 RIKGPLILGFKVDKNKKSTLVAVSEPSRLKLET-KKENHKRVRSVTKPSKGVHVASVAEA 1610
            R+K PLI+ FK DK+  S LVA  E   + +ET KK   KR+    K  K        E+
Sbjct: 25   RLKRPLIVAFKGDKHNDSALVATQEKIPVPVETAKKTQKKRIGKTNKLPK-------RES 77

Query: 1609 SPYAVELDLNEAAAKLESIFKLSPSTDVLDAENIDQFVXXXXXXXXKSPEVDEKKTKKTD 1430
            SP ++++D NEAAA LE+++KLSP++D  +AE ID  +        K  +  E+K  K D
Sbjct: 78   SPSSMDVDYNEAAAMLENLYKLSPASD--NAECIDGKIKRVSRRGKKVVDESEEKELKGD 135

Query: 1429 AIVV-RNKNGKQKRLSLAKRIEMKQSKDSKEEKEVTSTERKRTSKNEDEKIDELVREYSS 1253
             +V  +NKN K KRL+L +RI +K +K   E   V  T +KR   N+ EKI+EL+REYS 
Sbjct: 136  WVVRNQNKNKKPKRLNLDQRISLKNNKSGDE---VIPTRKKRNVGNKIEKIEELIREYSV 192

Query: 1252 STDLVSLDWKKMKIPPVLPSTEHTWLFKSMEPMKALNQVKENLRTELGRDPTDNELGETM 1073
            STD VS+DWK+M+IPPVL S+EH WLFK M+PMKAL QVKE+L+ EL R+P D EL +  
Sbjct: 193  STDFVSMDWKRMRIPPVLSSSEHAWLFKLMQPMKALLQVKEDLQQELTREPADGELADAT 252

Query: 1072 NMTVVQVRRHLEVGHAARNKLIKHNLRLVLFVMNKYFQDFTNGPRFQDLCQAGVKGLIIA 893
            NM++ QVR+ ++VG AARNKLIKHNLRLVLFV+NKYF DF +GPRFQDLCQAGVKGLI A
Sbjct: 253  NMSITQVRKAIDVGQAARNKLIKHNLRLVLFVINKYFTDFASGPRFQDLCQAGVKGLITA 312

Query: 892  IDRFEPRRKFRLSTYALFWIRHAIIRSMTVSSFTRVSFGLESVRYEIHKAKLELMFELKR 713
            IDRFEP R+FRLSTY+LFWIRHAIIRSMT+S+FTRV FGLESVR EI KAK EL FEL+R
Sbjct: 313  IDRFEPNRRFRLSTYSLFWIRHAIIRSMTLSNFTRVPFGLESVRAEIQKAKTELTFELQR 372

Query: 712  MPTEEEIFERVGISAERYQDVMRASNSVASLHSRNQVTQEELINGIVDVNGVGSDDQIQP 533
             PTEEEI ERV IS ERY DV++AS S+ SL+SR+  TQEE INGIVD +GV  D++ QP
Sbjct: 373  SPTEEEIIERVHISPERYHDVIKASKSILSLNSRHTTTQEEFINGIVDDDGVNGDNRKQP 432

Query: 532  XXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIAGNLSISREMVRKHEMKALMK 353
                         LKPKESLVIR R+GLDGKGDRTLGEIAGNL+ISREMVRKHE+KALMK
Sbjct: 433  ALLRLALDDVLDSLKPKESLVIRXRFGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMK 492

Query: 352  LKHPTRVDYLQRHI 311
            LKH  R+DYL+R++
Sbjct: 493  LKHSARLDYLRRYV 506


>dbj|BAJ34205.1| unnamed protein product [Thellungiella halophila]
          Length = 511

 Score =  549 bits (1415), Expect = e-153
 Identities = 302/522 (57%), Positives = 375/522 (71%), Gaps = 4/522 (0%)
 Frame = -3

Query: 1864 MGVVTVXXXXXXXXXXXXXXSTVHQYRIKGPLILGFKVDKNKKSTLVAVSEPSRLKLETK 1685
            MGVV +                 H+  +K P I+ FK D +  S L+  SE   +  E +
Sbjct: 1    MGVVFISSSAARSPLGLSSDLLTHRSSLKKPSIVAFKADDSTNSALIIPSEQILIPAEKQ 60

Query: 1684 KENHKRVRSVTKPSKGVHVASVAE---ASPYAVELDLNEAAAKLESIFKLSPSTDVLDAE 1514
            KE  KRV +  KP K     S  +   A   ++ +D NEAAA+LESI+KLSP+T V D  
Sbjct: 61   KE--KRVVTKRKPCKTPKKPSSLDHNLAPSCSLGVDYNEAAARLESIYKLSPATSVED-- 116

Query: 1513 NIDQFVXXXXXXXXKSPEVDEKKTKKTDAIVVRNKNGKQKRLSLAKRIEMKQSKDSKEEK 1334
            +ID           +    +EKK      +VVRN   K+KRLSL KRI +K  ++ +E+ 
Sbjct: 117  DIDGSKVKVSRRRRRKEGGEEKK------VVVRNNGMKEKRLSLDKRIALK--RNIQEKP 168

Query: 1333 EVTSTERKRTSKN-EDEKIDELVREYSSSTDLVSLDWKKMKIPPVLPSTEHTWLFKSMEP 1157
             V S ++K T K  E+EKI+ LVR+YS+S D+VSLDWKKMKIPPVLPSTEH WLFK M+P
Sbjct: 169  LVPSAQKKVTKKQQEEEKIERLVRDYSASHDIVSLDWKKMKIPPVLPSTEHAWLFKLMQP 228

Query: 1156 MKALNQVKENLRTELGRDPTDNELGETMNMTVVQVRRHLEVGHAARNKLIKHNLRLVLFV 977
            MKAL QVK+ L+  LGR+P + E+   +NM+  +V+R +E+G AARNKLIKHNLRLVLFV
Sbjct: 229  MKALLQVKDELQKSLGREPRETEIAGEINMSAAEVKRKIEIGRAARNKLIKHNLRLVLFV 288

Query: 976  MNKYFQDFTNGPRFQDLCQAGVKGLIIAIDRFEPRRKFRLSTYALFWIRHAIIRSMTVSS 797
            MNKYFQDFTNGP+FQDLCQAG++GLI AIDRFEP+RKFRLSTY LFWIRHAIIRSMT S+
Sbjct: 289  MNKYFQDFTNGPKFQDLCQAGMRGLITAIDRFEPKRKFRLSTYGLFWIRHAIIRSMTTSN 348

Query: 796  FTRVSFGLESVRYEIHKAKLELMFELKRMPTEEEIFERVGISAERYQDVMRASNSVASLH 617
            FTRV FGLESVR EI+K K+EL+FEL R+PTE+E+ ER+ IS ERY++V+RA+  V SL+
Sbjct: 349  FTRVPFGLESVRVEIYKTKMELLFELGRLPTEDEVVERLKISPERYREVLRAAKPVFSLN 408

Query: 616  SRNQVTQEELINGIVDVNGVGSDDQIQPXXXXXXXXXXXXXLKPKESLVIRQRYGLDGKG 437
            S++ VTQEE INGI DV+GVG+D++ QP             LKPKESLVIRQRYGLDGKG
Sbjct: 409  SKHSVTQEEFINGITDVDGVGADNRRQPAILRLALDDVLDSLKPKESLVIRQRYGLDGKG 468

Query: 436  DRTLGEIAGNLSISREMVRKHEMKALMKLKHPTRVDYLQRHI 311
            DRTLGEIAGNL+ISREMVRKHE+KALMKLKH  RVDYL+++I
Sbjct: 469  DRTLGEIAGNLNISREMVRKHEVKALMKLKHQARVDYLRQYI 510