BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00011654
         (1523 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22720.3| unnamed protein product [Vitis vinifera]              282   2e-85
ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III s...   275   3e-83
gb|EOY23205.1| RNA polymerase III subunit RPC82 family protein, ...   281   2e-82
ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III s...   271   7e-81
ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III s...   270   2e-79
ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citr...   271   8e-79
ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III s...   263   2e-76
ref|XP_004168254.1| PREDICTED: DNA-directed RNA polymerase III s...   246   1e-69
ref|XP_004140835.1| PREDICTED: DNA-directed RNA polymerase III s...   246   1e-69
ref|XP_004308082.1| PREDICTED: DNA-directed RNA polymerase III s...   232   4e-69
gb|EXC19135.1| DNA-directed RNA polymerase III subunit RPC3 [Mor...   244   3e-68
ref|XP_003555382.1| PREDICTED: DNA-directed RNA polymerase III s...   240   3e-68
ref|XP_006589539.1| PREDICTED: DNA-directed RNA polymerase III s...   239   4e-68
gb|EMJ20202.1| hypothetical protein PRUPE_ppa004195mg [Prunus pe...   228   3e-66
emb|CBI26210.3| unnamed protein product [Vitis vinifera]              236   7e-66
gb|EOY23206.1| RNA polymerase III subunit RPC82 family protein, ...   219   8e-64
gb|ESW15419.1| hypothetical protein PHAVU_007G071300g [Phaseolus...   250   1e-63
ref|XP_002321920.2| RNA polymerase 3 subunit RPC82 family protei...   223   1e-63
ref|XP_002872419.1| RNA polymerase III subunit RPC82 family prot...   229   7e-63
ref|XP_002875937.1| RNA polymerase III subunit RPC82 family prot...   226   3e-62

>emb|CBI22720.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score =  282 bits (722), Expect(2) = 2e-85
 Identities = 154/301 (51%), Positives = 212/301 (70%), Gaps = 11/301 (3%)
 Frame = -2

Query: 1303 SQGLKVGEKRKKDTVEWDSELDIMGGKKEPLWRVNFAEFINRLRIKVCVEYARAEYDNSA 1124
            S  +  GEKRK+D +E D E      +K+ LWR NF EF+  LR K C+   +   D+ A
Sbjct: 229  SPNVTAGEKRKQDALELDKETGA-SCEKDVLWRANFEEFVRCLRHKACIANVKTRLDDGA 287

Query: 1123 AVILNSMLEGTKG------TESTVSLSLDSIFEEVIKTKEGLTMNLERIRGSLRQMDF-- 968
            A++L++MLE T+       TE++V LS+D+IFE V+K++ G +M LER+RGSL Q+    
Sbjct: 288  AIVLSAMLEATRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSLIQLGCAP 347

Query: 967  CYE-ANDVYSINLKDVIKKAQLEEVESIVKKRYGIEAFRMFRSLSNG-RALDTDKISERT 794
            C   A + YS++LK++I+ AQ +EVESI  KRYG +A+R+FR LS   R L+TDKIS+ T
Sbjct: 348  CVRGAAESYSVDLKNIIELAQNDEVESITLKRYGRDAYRIFRLLSKSCRLLETDKISDTT 407

Query: 793  FVDKKTTPQVLYKLWKDNYIQMEKITTGGPRQTDFFLWSVKKDNLWHHILDEMYHAALNL 614
            FV+KK T ++LY+LWKD Y+QMEK+   G RQ+ F LW V KD LW H+L+EMYH+ALNL
Sbjct: 408  FVEKKDTAKILYQLWKDEYLQMEKLNLHGSRQSQFLLWKVTKDTLWGHVLNEMYHSALNL 467

Query: 613  SLRYAHEVDQERELLQI-QNLGSGSVPQELERRKVHLRNVRILLDSSLMKLDDAIMLFHD 437
            SLR A+E++QE+E++Q+ +    G++    ER    LR VRILL+SSLMKLDDAIMLF+D
Sbjct: 468  SLRVAYELEQEQEIIQLPREKRVGALGNRFER----LRKVRILLESSLMKLDDAIMLFND 523

Query: 436  F 434
            F
Sbjct: 524  F 524



 Score = 62.8 bits (151), Expect(2) = 2e-85
 Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
 Frame = -1

Query: 1523 ELFIKLVHNRLVERCPAAEPLISLPNEEETPAKKGGRSKTR---REVTLEERALAAAIPM 1353
            E F+KLV    VERCPA+EP ++ P+EEETPA+K G    +      T+E+RA+AAA PM
Sbjct: 152  ESFLKLVRAHFVERCPASEPFLAPPSEEETPARKRGAKSAKLVEEPQTIEQRAIAAAAPM 211


>ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Vitis
            vinifera]
          Length = 511

 Score =  275 bits (703), Expect(2) = 3e-83
 Identities = 150/292 (51%), Positives = 207/292 (70%), Gaps = 11/292 (3%)
 Frame = -2

Query: 1276 RKKDTVEWDSELDIMGGKKEPLWRVNFAEFINRLRIKVCVEYARAEYDNSAAVILNSMLE 1097
            RK+D +E D E      +K+ LWR NF EF+  LR K C+   +   D+ AA++L++MLE
Sbjct: 225  RKQDALELDKETGA-SCEKDVLWRANFEEFVRCLRHKACIANVKTRLDDGAAIVLSAMLE 283

Query: 1096 GTKG------TESTVSLSLDSIFEEVIKTKEGLTMNLERIRGSLRQMDF--CYE-ANDVY 944
             T+       TE++V LS+D+IFE V+K++ G +M LER+RGSL Q+    C   A + Y
Sbjct: 284  ATRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSLIQLGCAPCVRGAAESY 343

Query: 943  SINLKDVIKKAQLEEVESIVKKRYGIEAFRMFRSLSNG-RALDTDKISERTFVDKKTTPQ 767
            S++LK++I+ AQ +EVESI  KRYG +A+R+FR LS   R L+TDKIS+ TFV+KK T +
Sbjct: 344  SVDLKNIIELAQNDEVESITLKRYGRDAYRIFRLLSKSCRLLETDKISDTTFVEKKDTAK 403

Query: 766  VLYKLWKDNYIQMEKITTGGPRQTDFFLWSVKKDNLWHHILDEMYHAALNLSLRYAHEVD 587
            +LY+LWKD Y+QMEK+   G RQ+ F LW V KD LW H+L+EMYH+ALNLSLR A+E++
Sbjct: 404  ILYQLWKDEYLQMEKLNLHGSRQSQFLLWKVTKDTLWGHVLNEMYHSALNLSLRVAYELE 463

Query: 586  QERELLQI-QNLGSGSVPQELERRKVHLRNVRILLDSSLMKLDDAIMLFHDF 434
            QE+E++Q+ +    G++    ER    LR VRILL+SSLMKLDDAIMLF+DF
Sbjct: 464  QEQEIIQLPREKRVGALGNRFER----LRKVRILLESSLMKLDDAIMLFNDF 511



 Score = 62.8 bits (151), Expect(2) = 3e-83
 Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
 Frame = -1

Query: 1523 ELFIKLVHNRLVERCPAAEPLISLPNEEETPAKKGGRSKTR---REVTLEERALAAAIPM 1353
            E F+KLV    VERCPA+EP ++ P+EEETPA+K G    +      T+E+RA+AAA PM
Sbjct: 145  ESFLKLVRAHFVERCPASEPFLAPPSEEETPARKRGAKSAKLVEEPQTIEQRAIAAAAPM 204


>gb|EOY23205.1| RNA polymerase III subunit RPC82 family protein, putative isoform 1
            [Theobroma cacao]
          Length = 523

 Score =  281 bits (719), Expect(2) = 2e-82
 Identities = 154/302 (50%), Positives = 211/302 (69%), Gaps = 10/302 (3%)
 Frame = -2

Query: 1309 SKSQGLKVGEKRKKDTVEWDSELDIMGGKKEPLWRVNFAEFINRLRIKVCVEYARAEYDN 1130
            + S  + VG+KRK D +E ++E +    ++  LWR NF EFI RLR K  +E  RA  D+
Sbjct: 233  NNSSSMTVGKKRKLDALESETEGEATD-EQVVLWRANFEEFIRRLRHKAFIENVRACLDD 291

Query: 1129 SAAVILNSMLEGTKG------TESTVSLSLDSIFEEVIKTKEGLTMNLERIRGSLRQMD- 971
             A +++++MLE T+       TE++V LSL+SI+EEVIK++EG  +  +R+R SL Q+  
Sbjct: 292  GAVIVISAMLEATRTAEKKVKTENSVPLSLNSIYEEVIKSEEGRNITFDRVRASLVQLSC 351

Query: 970  --FCYEANDVYSINLKDVIKKAQLEEVESIVKKRYGIEAFRMFRSLSN-GRALDTDKISE 800
              F    N+ YSI+ K +I+ AQ +EVESIV KRYG +A+RMFR LS+  R L+TDKI++
Sbjct: 352  PPFVKAVNESYSIDFKKIIELAQNDEVESIVLKRYGRDAYRMFRLLSSTARLLETDKIAD 411

Query: 799  RTFVDKKTTPQVLYKLWKDNYIQMEKITTGGPRQTDFFLWSVKKDNLWHHILDEMYHAAL 620
              FV+KK T ++LYKLWKD+Y+ MEK+   G RQ+ F LW V K+ LW H+LDEM+HAAL
Sbjct: 412  TAFVEKKDTTKILYKLWKDDYLHMEKLQLTGARQSQFLLWKVNKNTLWEHVLDEMFHAAL 471

Query: 619  NLSLRYAHEVDQERELLQIQNLGSGSVPQELERRKVHLRNVRILLDSSLMKLDDAIMLFH 440
            NLSLR AHE++QE+ELL        ++PQ  ++R   LR VR+LL+SS MKLDDAIMLFH
Sbjct: 472  NLSLRVAHELEQEKELL--------NLPQ--DKRVNRLRKVRLLLESSQMKLDDAIMLFH 521

Query: 439  DF 434
            DF
Sbjct: 522  DF 523



 Score = 53.9 bits (128), Expect(2) = 2e-82
 Identities = 29/59 (49%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
 Frame = -1

Query: 1523 ELFIKLVHNRLVERCPAAEPLISLPNEEETPAKKGGRSKTR---REVTLEERALAAAIP 1356
            E FIKL++   VERCPAAEP+++ P EEET A+K      +    + TLE+R L AA P
Sbjct: 152  EAFIKLLNAHFVERCPAAEPVLTKPTEEETSARKRVPKSAKILEGKETLEQRVLEAATP 210


>ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3-like [Solanum
            lycopersicum]
          Length = 525

 Score =  271 bits (694), Expect(2) = 7e-81
 Identities = 144/301 (47%), Positives = 211/301 (70%), Gaps = 10/301 (3%)
 Frame = -2

Query: 1306 KSQGLKVGEKRKKDTVEWDSELDIMGGKKEPLWRVNFAEFINRLRIKVCVEYARAEYDNS 1127
            ++  +K G KRK++ +E +++ D   G+KE LWR NF EFI RLR K CV   +   +N 
Sbjct: 229  RTTDVKCGMKRKQEDLESNTK-DPATGEKEVLWRANFEEFIRRLRHKACVANVKVRVNND 287

Query: 1126 AAVILNSMLEGTKGTES------TVSLSLDSIFEEVIKTKEGLTMNLERIRGSLRQMDF- 968
            AA++L + LE ++ +E+      +V  S+++I++EVIK + GL M+LERIR SL  +   
Sbjct: 288  AAIVLAATLELSRHSETKLRIDNSVPQSINAIYDEVIKREGGLGMDLERIRASLDDLGCE 347

Query: 967  --CYEANDVYSINLKDVIKKAQLEEVESIVKKRYGIEAFRMFRSLSNG-RALDTDKISER 797
                E ++ YS++LK++I++A++EEVESIV KRYG EA+RMFR LS   R ++TDKIS+ 
Sbjct: 348  APLMEIDETYSVDLKNIIEQARIEEVESIVLKRYGREAYRMFRLLSKADRLVETDKISDT 407

Query: 796  TFVDKKTTPQVLYKLWKDNYIQMEKITTGGPRQTDFFLWSVKKDNLWHHILDEMYHAALN 617
            TFV+KK   ++L+KLWKD+Y++M+K+    P+Q++F LW + K +LW HILDEMYHAALN
Sbjct: 408  TFVEKKDAVKILFKLWKDDYLEMKKVIARAPKQSEFILWKINKQSLWEHILDEMYHAALN 467

Query: 616  LSLRYAHEVDQERELLQIQNLGSGSVPQELERRKVHLRNVRILLDSSLMKLDDAIMLFHD 437
            L LR  HE +QE+E+LQ   +    +  EL  + + LR V I+L+SSLM LDD++MLFHD
Sbjct: 468  LRLRTTHEKEQEKEILQ---MPKDKLVGELGNKYMRLRKVCIVLESSLMNLDDSLMLFHD 524

Query: 436  F 434
            F
Sbjct: 525  F 525



 Score = 58.2 bits (139), Expect(2) = 7e-81
 Identities = 31/56 (55%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
 Frame = -1

Query: 1517 FIKLVHNRLVERCPAAEPLISLPNEEETPAKK-GGRSKTRREVTLEERALAAAIPM 1353
            F +LV+ R VERCPA +PL+  P EEET AKK G +S   +  T+E++ALAAA PM
Sbjct: 153  FNRLVNARFVERCPAPDPLLEPPAEEETAAKKRGAKSAKIQAQTMEQQALAAAAPM 208


>ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3-like [Solanum
            tuberosum]
          Length = 525

 Score =  270 bits (690), Expect(2) = 2e-79
 Identities = 145/301 (48%), Positives = 209/301 (69%), Gaps = 10/301 (3%)
 Frame = -2

Query: 1306 KSQGLKVGEKRKKDTVEWDSELDIMGGKKEPLWRVNFAEFINRLRIKVCVEYARAEYDNS 1127
            ++  +K G KRK+  +E +++ D   GKKE LWR NF EFI RLR K CV   +   +N 
Sbjct: 229  RTTDVKCGMKRKQGDLESNTK-DSATGKKEVLWRANFEEFIRRLRHKACVANVKVRVNND 287

Query: 1126 AAVILNSMLEGTKGTES------TVSLSLDSIFEEVIKTKEGLTMNLERIRGSLRQMDF- 968
            AAV+L + LE ++ +E+      +V  S+++I++EVIK + GL M+LERIR SL  +   
Sbjct: 288  AAVVLAATLELSRHSETKLRIDNSVPQSINAIYDEVIKREGGLGMDLERIRASLDDLGCE 347

Query: 967  --CYEANDVYSINLKDVIKKAQLEEVESIVKKRYGIEAFRMFRSLSNG-RALDTDKISER 797
                E ++ YS++LK++I++A++EEVESIV KRYG EA+RMFR LS   R ++TDKIS+ 
Sbjct: 348  APLMEIDETYSVDLKNIIEQARIEEVESIVLKRYGREAYRMFRLLSKADRLVETDKISDT 407

Query: 796  TFVDKKTTPQVLYKLWKDNYIQMEKITTGGPRQTDFFLWSVKKDNLWHHILDEMYHAALN 617
            TFV+KK   ++L+KLWKD+Y++M+K+     +Q++F LW + K +LW HILDEMYHAALN
Sbjct: 408  TFVEKKDAVKILFKLWKDDYLEMKKVIARAAKQSEFILWKINKQSLWEHILDEMYHAALN 467

Query: 616  LSLRYAHEVDQERELLQIQNLGSGSVPQELERRKVHLRNVRILLDSSLMKLDDAIMLFHD 437
            L LR  HE +QE+E+LQ   +    +  EL  + + LR V I+L+SSLM LDD++MLFHD
Sbjct: 468  LRLRITHEKEQEKEILQ---MPKDKLVGELGNKYMRLRKVCIVLESSLMNLDDSLMLFHD 524

Query: 436  F 434
            F
Sbjct: 525  F 525



 Score = 55.1 bits (131), Expect(2) = 2e-79
 Identities = 30/56 (53%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
 Frame = -1

Query: 1517 FIKLVHNRLVERCPAAEPLISLPNEEETPAKK-GGRSKTRREVTLEERALAAAIPM 1353
            F  LV+ R VERCPA +PL+  P  EET AKK G +S   +  T+E++ALAAA PM
Sbjct: 153  FNSLVNARFVERCPAPDPLLEPPAAEETAAKKRGAKSAKIQAQTMEQQALAAAAPM 208


>ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citrus clementina]
            gi|568874593|ref|XP_006490399.1| PREDICTED: DNA-directed
            RNA polymerase III subunit RPC3-like isoform X1 [Citrus
            sinensis] gi|557523806|gb|ESR35173.1| hypothetical
            protein CICLE_v10004721mg [Citrus clementina]
          Length = 527

 Score =  271 bits (693), Expect(2) = 8e-79
 Identities = 150/300 (50%), Positives = 206/300 (68%), Gaps = 10/300 (3%)
 Frame = -2

Query: 1303 SQGLKVGEKRKKDTVEWDSELDIMGGKKEPLWRVNFAEFINRLRIKVCVEYARAEYDNSA 1124
            S  +  GEKRK D +E D E  +   ++  ++R NF  FI RLR K C+++ RA  D+ A
Sbjct: 233  SNNVTPGEKRKHDVLELD-ECGV-ADEQSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGA 290

Query: 1123 AVILNSMLEGTKG------TESTVSLSLDSIFEEVIKTKEGLTMNLERIRGSLRQM---D 971
            A +L++ML+ T        T+++V LSL SI+EEVIK++ G  M L+ +R SL Q+    
Sbjct: 291  ANVLSAMLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQLGELS 350

Query: 970  FCYEANDVYSINLKDVIKKAQLEEVESIVKKRYGIEAFRMFRSLS-NGRALDTDKISERT 794
            F   ++D YSI+ + +I+ AQ EEVES+V KRYG +A+R+FR LS +GR L+TDKIS+ T
Sbjct: 351  FVDASSDSYSIDFEKIIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDKISDTT 410

Query: 793  FVDKKTTPQVLYKLWKDNYIQMEKITTGGPRQTDFFLWSVKKDNLWHHILDEMYHAALNL 614
            FV+KK  P++LYKLWKD Y+ MEK+   G RQ+ F LW V +  LW H+LDEM+HAALNL
Sbjct: 411  FVEKKDAPKILYKLWKDGYLLMEKLVVTGARQSQFLLWKVNRQILWKHVLDEMFHAALNL 470

Query: 613  SLRYAHEVDQERELLQIQNLGSGSVPQELERRKVHLRNVRILLDSSLMKLDDAIMLFHDF 434
            SLR ++E+D+E+ELL   NL +      L+ R   +R VRILL+SS MKLDDAI+LFHDF
Sbjct: 471  SLRVSYELDREKELL---NLPADKRTGPLQDRYNRIRKVRILLESSQMKLDDAILLFHDF 527



 Score = 51.6 bits (122), Expect(2) = 8e-79
 Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 4/61 (6%)
 Frame = -1

Query: 1523 ELFIKLVHNRLVERCPAAEPLISLPNEEETPAKKGGRSKTRREV----TLEERALAAAIP 1356
            E  +KLV    VERCPA+EPL+   +EEE PA+K G SK+ +++    T+E++ + AA+P
Sbjct: 152  ETLVKLVTAHYVERCPASEPLLMPISEEEGPARKKG-SKSAKKIGEPETIEQQVVEAALP 210

Query: 1355 M 1353
            M
Sbjct: 211  M 211


>ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like isoform
            X2 [Citrus sinensis]
          Length = 512

 Score =  263 bits (673), Expect(2) = 2e-76
 Identities = 147/297 (49%), Positives = 200/297 (67%), Gaps = 7/297 (2%)
 Frame = -2

Query: 1303 SQGLKVGEKRKKDTVEWDSELDIMGGKKEPLWRVNFAEFINRLRIKVCVEYARAEYDNSA 1124
            S  +  GEKRK D +E D E  +   ++  ++R NF  FI RLR K C+++ RA  D+ A
Sbjct: 233  SNNVTPGEKRKHDVLELD-ECGV-ADEQSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGA 290

Query: 1123 AVILNSMLEGTKG------TESTVSLSLDSIFEEVIKTKEGLTMNLERIRGSLRQMDFCY 962
            A +L++ML+ T        T+++V LSL SI+EEVIK++ G  M L+ +R SL Q+DF  
Sbjct: 291  ANVLSAMLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQLDF-- 348

Query: 961  EANDVYSINLKDVIKKAQLEEVESIVKKRYGIEAFRMFRSLS-NGRALDTDKISERTFVD 785
                      + +I+ AQ EEVES+V KRYG +A+R+FR LS +GR L+TDKIS+ TFV+
Sbjct: 349  ----------EKIIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDKISDTTFVE 398

Query: 784  KKTTPQVLYKLWKDNYIQMEKITTGGPRQTDFFLWSVKKDNLWHHILDEMYHAALNLSLR 605
            KK  P++LYKLWKD Y+ MEK+   G RQ+ F LW V +  LW H+LDEM+HAALNLSLR
Sbjct: 399  KKDAPKILYKLWKDGYLLMEKLVVTGARQSQFLLWKVNRQILWKHVLDEMFHAALNLSLR 458

Query: 604  YAHEVDQERELLQIQNLGSGSVPQELERRKVHLRNVRILLDSSLMKLDDAIMLFHDF 434
             ++E+D+E+ELL   NL +      L+ R   +R VRILL+SS MKLDDAI+LFHDF
Sbjct: 459  VSYELDREKELL---NLPADKRTGPLQDRYNRIRKVRILLESSQMKLDDAILLFHDF 512



 Score = 51.6 bits (122), Expect(2) = 2e-76
 Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 4/61 (6%)
 Frame = -1

Query: 1523 ELFIKLVHNRLVERCPAAEPLISLPNEEETPAKKGGRSKTRREV----TLEERALAAAIP 1356
            E  +KLV    VERCPA+EPL+   +EEE PA+K G SK+ +++    T+E++ + AA+P
Sbjct: 152  ETLVKLVTAHYVERCPASEPLLMPISEEEGPARKKG-SKSAKKIGEPETIEQQVVEAALP 210

Query: 1355 M 1353
            M
Sbjct: 211  M 211


>ref|XP_004168254.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Cucumis
            sativus]
          Length = 518

 Score =  246 bits (629), Expect(2) = 1e-69
 Identities = 135/296 (45%), Positives = 194/296 (65%), Gaps = 12/296 (4%)
 Frame = -2

Query: 1285 GEKRKKDTVEWDSELDIMGGKKEPLWRVNFAEFINRLRIKVCVEYARAEYDNSAAVILNS 1106
            G+KRK D +E   +     G    LWR N+ EFI  LR K C+E+ R+++D+    +L++
Sbjct: 229  GQKRKHDDLEIAQDSGDADGPI--LWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSA 286

Query: 1105 MLEGTKG------TESTVSLSLDSIFEEVIKTKEGLTMNLERIRGSLRQMDFC-----YE 959
            +LE T+       TE TV LSLD+I+EEV+K + G +M L+R+  SL  +  C     Y+
Sbjct: 287  ILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALG-CPGIDDYK 345

Query: 958  ANDVYSINLKDVIKKAQLEEVESIVKKRYGIEAFRMFRSLSN-GRALDTDKISERTFVDK 782
             +   +++   +I++AQ +EVESIV KRYG +A+RMFR LS  G  ++T+KIS+ +FVDK
Sbjct: 346  ISMFTTVDFSMIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKISDSSFVDK 405

Query: 781  KTTPQVLYKLWKDNYIQMEKITTGGPRQTDFFLWSVKKDNLWHHILDEMYHAALNLSLRY 602
               P++LY+LWKD Y+ MEK+    PR +   LW V + NLW H+LDEMYHA+LNL LR 
Sbjct: 406  NEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRL 465

Query: 601  AHEVDQERELLQIQNLGSGSVPQELERRKVHLRNVRILLDSSLMKLDDAIMLFHDF 434
            AHE+++ +ELL   +L   +  + L ++  H  NVR LL SSL+KLDDA+MLFHDF
Sbjct: 466  AHEIEENKELL---SLPKDNNNKPLVKKMHHFENVRNLLRSSLVKLDDALMLFHDF 518



 Score = 45.4 bits (106), Expect(2) = 1e-69
 Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
 Frame = -1

Query: 1511 KLVHNRLVERCPAAEPLISLPNEEETPAKKGGRSKTRREV--TLEERALAAAIPM 1353
            KL++   VERCPA EP +S   EE  P K+G ++    EV  TLE+R + AA P+
Sbjct: 150  KLLNAHFVERCPAPEPTLSPKVEEPPPRKRGAKAAKISEVPETLEQRLIEAARPV 204


>ref|XP_004140835.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Cucumis
            sativus]
          Length = 518

 Score =  246 bits (629), Expect(2) = 1e-69
 Identities = 135/296 (45%), Positives = 194/296 (65%), Gaps = 12/296 (4%)
 Frame = -2

Query: 1285 GEKRKKDTVEWDSELDIMGGKKEPLWRVNFAEFINRLRIKVCVEYARAEYDNSAAVILNS 1106
            G+KRK D +E   +     G    LWR N+ EFI  LR K C+E+ R+++D+    +L++
Sbjct: 229  GQKRKHDDLEIAQDSGDADGPI--LWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSA 286

Query: 1105 MLEGTKG------TESTVSLSLDSIFEEVIKTKEGLTMNLERIRGSLRQMDFC-----YE 959
            +LE T+       TE TV LSLD+I+EEV+K + G +M L+R+  SL  +  C     Y+
Sbjct: 287  ILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALG-CPGMDDYK 345

Query: 958  ANDVYSINLKDVIKKAQLEEVESIVKKRYGIEAFRMFRSLSN-GRALDTDKISERTFVDK 782
             +   +++   +I++AQ +EVESIV KRYG +A+RMFR LS  G  ++T+KIS+ +FVDK
Sbjct: 346  ISMFTTVDFSMIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKISDSSFVDK 405

Query: 781  KTTPQVLYKLWKDNYIQMEKITTGGPRQTDFFLWSVKKDNLWHHILDEMYHAALNLSLRY 602
               P++LY+LWKD Y+ MEK+    PR +   LW V + NLW H+LDEMYHA+LNL LR 
Sbjct: 406  NEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRL 465

Query: 601  AHEVDQERELLQIQNLGSGSVPQELERRKVHLRNVRILLDSSLMKLDDAIMLFHDF 434
            AHE+++ +ELL   +L   +  + L ++  H  NVR LL SSL+KLDDA+MLFHDF
Sbjct: 466  AHEIEENKELL---SLPKDNNNKPLVKKMHHFENVRNLLRSSLVKLDDALMLFHDF 518



 Score = 45.4 bits (106), Expect(2) = 1e-69
 Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
 Frame = -1

Query: 1511 KLVHNRLVERCPAAEPLISLPNEEETPAKKGGRSKTRREV--TLEERALAAAIPM 1353
            KL++   VERCPA EP +S   EE  P K+G ++    EV  TLE+R + AA P+
Sbjct: 150  KLLNAHFVERCPAPEPTLSPKVEEPPPRKRGAKAAKISEVPETLEQRLIEAARPV 204


>ref|XP_004308082.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
            [Fragaria vesca subsp. vesca]
          Length = 534

 Score =  232 bits (592), Expect(2) = 4e-69
 Identities = 134/304 (44%), Positives = 189/304 (62%), Gaps = 19/304 (6%)
 Frame = -2

Query: 1288 VGEKRKKDTVEWDSELDIMGGKKEPLWRVNFAEFINRLRIKVCVEYARAEYDNSAAVILN 1109
            VGEKRK D +  DSE      K   LWR NF +FI  LR K C+E  RA +D+ AAV+L 
Sbjct: 236  VGEKRKFDDL--DSEEHGSNDKGVILWRANFEQFIRCLRHKACIESVRARHDDGAAVVLR 293

Query: 1108 SMLEGTKGTESTVS------LSLDSIFEEVIKTKEGLTMNLERIRGSLRQM--------D 971
            ++L+ T+  E+ V       L +D+I+EEV+ ++   ++  E +R  LR +        +
Sbjct: 294  AVLKATRNQETKVKTDYSGPLKMDAIYEEVMDSEACPSLEQECVRAHLRLLCGAPLVTGE 353

Query: 970  FCYEANDV-YSINLKDVIKKAQLEEVESIVKKRYGIEAFRMFRSLSN----GRALDTDKI 806
            +  E  DV YS++LK +I+  Q +EVESIV KRYG +A+R+FR L++    GR  +TDKI
Sbjct: 354  YEDENEDVLYSVDLKKIIELLQNDEVESIVLKRYGKDAYRIFRLLTSQSNAGRFFETDKI 413

Query: 805  SERTFVDKKTTPQVLYKLWKDNYIQMEKITTGGPRQTDFFLWSVKKDNLWHHILDEMYHA 626
            SE   VDKK TP++LYKLWKD+Y+ MEK++    +Q+   +W V K  +W H+LDEMYHA
Sbjct: 414  SEMALVDKKETPKILYKLWKDDYVHMEKLSLTAAKQSQVMVWKVHKSIVWEHVLDEMYHA 473

Query: 625  ALNLSLRYAHEVDQERELLQIQNLGSGSVPQELERRKVHLRNVRILLDSSLMKLDDAIML 446
            A NL  RY HE ++ +E   + N        ELE++      VR ++ SSL+KLDDA+ML
Sbjct: 474  AYNLVKRYDHEREENKE---VTNTPKEKRIGELEKKANRFLAVRKIMASSLLKLDDALML 530

Query: 445  FHDF 434
            FHDF
Sbjct: 531  FHDF 534



 Score = 58.2 bits (139), Expect(2) = 4e-69
 Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
 Frame = -1

Query: 1523 ELFIKLVHNRLVERCPAAEPLISLPNEEETPAKKGGRSKTRREV--TLEERALAAAIPM 1353
            E F++LV+ R VERCPA EPL+  P E+E P K  G+S    +V  T+E+R LAAA PM
Sbjct: 149  ENFVRLVNARFVERCPAPEPLLEEPPEQEGPKKPRGKSAKMVQVPETIEQRVLAAARPM 207


>gb|EXC19135.1| DNA-directed RNA polymerase III subunit RPC3 [Morus notabilis]
          Length = 564

 Score =  244 bits (623), Expect(2) = 3e-68
 Identities = 150/345 (43%), Positives = 199/345 (57%), Gaps = 55/345 (15%)
 Frame = -2

Query: 1303 SQGLKVGEKRKKDTVEWDSELDIMGGKKEP--LWRVNFAEFINRLRIKVCVEYARAEYDN 1130
            S  + VGEKRK    + D   D  G  +    LWR NF EF   LR K C+E  RA  D 
Sbjct: 227  SSSMGVGEKRKHGAADSD---DAFGSNENEVILWRANFEEFTRYLRHKACIENVRARLDV 283

Query: 1129 SAAVILNSMLEGTKG------TESTVSLSLDSIFEEVIKTKEGLTMNLERIRGSLRQMDF 968
             AA +L +ML+ T+       TE++VSLS+D+IFEEV+K++ G ++ L+R+R SL Q+  
Sbjct: 284  GAATVLKAMLDATRSAEKKVKTENSVSLSMDTIFEEVMKSEAGRSLTLDRVRASLVQLGC 343

Query: 967  CYEA-NDVYSINLKDVIKKAQLEEVESIVKKRYGIEAFRMFRSLSN-GRALDTDKISERT 794
                 +D YSI+LK +I+ AQ EEVESIV +RYG +A+RMFR LS  G   +TDKI++ T
Sbjct: 344  SSSGTDDTYSIDLKQIIELAQKEEVESIVLRRYGRDAYRMFRLLSKAGLLQETDKIADMT 403

Query: 793  FVDKKTTPQVLYKLWKDNYIQME-------------------------KITTGG------ 707
            FV+KK  P++L KLWKD Y+ ME                         ++T  G      
Sbjct: 404  FVEKKEAPKILGKLWKDEYLHMEVEYFNLLIKFTLSSNMAICDVVDKPRLTLSGMSDLVL 463

Query: 706  -------------PRQTDFFLWSVKKDNLWHHILDEMYHAALNLSLRYAHEVDQERELLQ 566
                          R T F+LW V K  LW H+LDEMYHAALNLSLR  HE+DQ++ELL 
Sbjct: 464  MDQNKEIVNKFVVDRNTTFYLWKVNKPILWQHVLDEMYHAALNLSLRVIHELDQKKELLT 523

Query: 565  I-QNLGSGSVPQELERRKVHLRNVRILLDSSLMKLDDAIMLFHDF 434
            I     +G + +E +R    L+N +  L+SSLMKLDDA+MLF  F
Sbjct: 524  IPPEKRTGPLEKEFKR----LKNAKFFLESSLMKLDDALMLFRHF 564



 Score = 43.5 bits (101), Expect(2) = 3e-68
 Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
 Frame = -1

Query: 1523 ELFIKLVHNRLVERCPAAEPLISLPNEEETPAKKGGRSKTRREV--TLEERALAAA 1362
            E F KL+++R VERCPA EP +  P+  ++  K+G +S    EV  T E+R LAAA
Sbjct: 145  ESFQKLLNSRFVERCPAPEPFVE-PSTIKSSNKRGAKSAKLDEVSETEEQRVLAAA 199


>ref|XP_003555382.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Glycine
            max]
          Length = 518

 Score =  240 bits (612), Expect(2) = 3e-68
 Identities = 137/301 (45%), Positives = 191/301 (63%), Gaps = 11/301 (3%)
 Frame = -2

Query: 1303 SQGLKVGEKRKKDTVEWDSELDIMGGKKEPLWRVNFAEFINRLRIKVCVEYARAEYDNSA 1124
            + G  V  +   D V   S  + +  +++ LWR NF EFI  LR KV +E  R ++D+  
Sbjct: 220  NMGSNVDRETNSDDVPMISVEEDVAKEEQILWRANFEEFIRHLRHKVLIENVRTQHDDGT 279

Query: 1123 AVILNSMLEGTKGTE------STVSLSLDSIFEEVIKTKEGLTMNLERIRGSLRQMDFCY 962
            A +L+++LE T   E      ++V LSLD+I  EV+KT  G TM ++RIR SL Q+  C 
Sbjct: 280  ATVLSAVLEATGSVEKKVKMDNSVPLSLDTIITEVMKTDTGRTMTIDRIRASLVQLG-CS 338

Query: 961  EA---NDVYSINLKDVIKKAQLEEVESIVKKRYGIEAFRMFRSLSNGRAL-DTDKISERT 794
             +    + Y I+LK +I+ A+ EEVESIV KRYG +A+RMFR L+      DTD+I+  T
Sbjct: 339  PSMILEESYCIDLKKIIEPARNEEVESIVLKRYGRDAYRMFRLLAKDCCFHDTDQIAAST 398

Query: 793  FVDKKTTPQVLYKLWKDNYIQMEKI-TTGGPRQTDFFLWSVKKDNLWHHILDEMYHAALN 617
             V+KK   ++LYKLWKDNY+ MEK+  T G +Q    +W V K  LW ++LDEMYHAALN
Sbjct: 399  LVEKKEASKLLYKLWKDNYLYMEKVGATAGAKQITILMWKVNKPLLWEYVLDEMYHAALN 458

Query: 616  LSLRYAHEVDQERELLQIQNLGSGSVPQELERRKVHLRNVRILLDSSLMKLDDAIMLFHD 437
            LSLR A E +++ ELL++        P  L+++   L NVR+L+ SSL+KLDDA+MLFHD
Sbjct: 459  LSLRMAFEQEKDEELLKVPK-DKLREPGPLQKKYKRLLNVRLLMGSSLLKLDDALMLFHD 517

Query: 436  F 434
            F
Sbjct: 518  F 518



 Score = 47.4 bits (111), Expect(2) = 3e-68
 Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
 Frame = -1

Query: 1523 ELFIKLVHNRLVERCPAAEPLISLPNEEETPAKKGGRSKTRREV--TLEERALAAAIP 1356
            E   KL+  R VERCPA EP++S   +E T  K+G +S    E   TLE+R + AA+P
Sbjct: 152  ETLCKLLTARFVERCPAPEPVVSTSFKETTTKKRGAKSAKIFEAPETLEQRVVDAAVP 209


>ref|XP_006589539.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Glycine
            max]
          Length = 518

 Score =  239 bits (611), Expect(2) = 4e-68
 Identities = 137/296 (46%), Positives = 190/296 (64%), Gaps = 11/296 (3%)
 Frame = -2

Query: 1288 VGEKRKKDTVEWDSELDIMGGKKEPLWRVNFAEFINRLRIKVCVEYARAEYDNSAAVILN 1109
            V  +   D  +  S  + +  + + LWR NF EFI  LR KV +E  R ++D+  A +L+
Sbjct: 225  VDRETNSDDAQMISVEEEVAKEGQILWRANFEEFIRHLRHKVLIENVRTQHDDGTATVLS 284

Query: 1108 SMLEGTKG------TESTVSLSLDSIFEEVIKTKEGLTMNLERIRGSLRQMDFCYEA--- 956
            ++LE T+       TE++V LSLD+I  EV+KT  G TM ++RIR SL Q+  C  +   
Sbjct: 285  AVLEATRSVQKKVKTENSVPLSLDTIITEVMKTDTGRTMTVDRIRASLVQLG-CSPSMIL 343

Query: 955  NDVYSINLKDVIKKAQLEEVESIVKKRYGIEAFRMFRSLSNGRAL-DTDKISERTFVDKK 779
             + YSI+LK +I+ A+ EEVESIV KRYG + +R+FR L+      DTD+I+  T V+KK
Sbjct: 344  EESYSIDLKKIIEPARNEEVESIVLKRYGTDGYRIFRLLAKDCCFHDTDQIAASTLVEKK 403

Query: 778  TTPQVLYKLWKDNYIQMEKI-TTGGPRQTDFFLWSVKKDNLWHHILDEMYHAALNLSLRY 602
               ++LYKLWKDNY+ MEK+  T G +QT   +W V K  LW ++LDEMYHAALNLSLR 
Sbjct: 404  EASKLLYKLWKDNYLYMEKVGATVGAKQTTILMWKVNKPLLWEYVLDEMYHAALNLSLRM 463

Query: 601  AHEVDQERELLQIQNLGSGSVPQELERRKVHLRNVRILLDSSLMKLDDAIMLFHDF 434
            A E +++ ELL++        P  L+++   L NV +LL SSLMKLDDA+MLFHDF
Sbjct: 464  AFEQEKDEELLKVPK-DKRQGPGPLQKKYKKLLNVWLLLGSSLMKLDDALMLFHDF 518



 Score = 47.4 bits (111), Expect(2) = 4e-68
 Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
 Frame = -1

Query: 1523 ELFIKLVHNRLVERCPAAEPLISLPNEEETPAKKGGRSKTRREV--TLEERALAAAIP 1356
            E   KL+  R VERCPA EP++S   +E T  K+G +S    E   TLE+R + AA+P
Sbjct: 152  ETLCKLLTARFVERCPAPEPVVSTSFKETTTRKRGAKSAKIFEAPETLEQRVVDAAVP 209


>gb|EMJ20202.1| hypothetical protein PRUPE_ppa004195mg [Prunus persica]
          Length = 524

 Score =  228 bits (582), Expect(2) = 3e-66
 Identities = 137/307 (44%), Positives = 192/307 (62%), Gaps = 16/307 (5%)
 Frame = -2

Query: 1306 KSQGLKVGEKRKKDTVEWDSELDIMGGKKEP-LWRVNFAEFINRLRIKVCVEYARAEYDN 1130
            KS  + VGEK     V     + I  G  E  LWR NF EFI  LR K CVE  RA  D+
Sbjct: 226  KSDNMSVGEKVGIGIV-----ISIYQGYDEVVLWRANFEEFIRCLRHKACVENVRARLDD 280

Query: 1129 SAAVILNSMLEGTKG------TESTVSLSLDSIFEEVIKTKEGLTMNLERIRGSLRQMDF 968
             AAV+L +ML+ T+       TE++V LSL++I+EEVI ++ G ++ + R+R SL  +  
Sbjct: 281  EAAVVLRAMLKATRTAEKKVKTENSVPLSLNTIYEEVINSEAGRSLTMGRVRDSLSGLCD 340

Query: 967  CYEANDV-----YSINLKDVIKKAQLEEVESIVKKRYGIEAFRMFRSLS-NGRALDTDKI 806
              +  DV     YS +LK +++ AQ +EVE IV KRYG +A+ MFR LS  GR ++TDKI
Sbjct: 341  SSQERDVDEDESYSADLKKILELAQDDEVELIVLKRYGKDAYTMFRILSLAGRPIETDKI 400

Query: 805  SERT---FVDKKTTPQVLYKLWKDNYIQMEKITTGGPRQTDFFLWSVKKDNLWHHILDEM 635
            S+ +    V+K  TP++LY LWKD+Y+ ME++   G RQ+ F +W V K  +W H+LDEM
Sbjct: 401  SDMSQLSLVEKNETPKILYNLWKDDYLHMERLVVTGARQSQFLVWRVDKPIIWKHVLDEM 460

Query: 634  YHAALNLSLRYAHEVDQERELLQIQNLGSGSVPQELERRKVHLRNVRILLDSSLMKLDDA 455
            +H ALNLSLR A E   E    +I +L +  +  E+ ++    RNV ++L +SL+KLDDA
Sbjct: 461  FHTALNLSLRLACE---EERFKEITDLPAHKLLGEMAKQWQLYRNVILVLQASLLKLDDA 517

Query: 454  IMLFHDF 434
            +MLFHDF
Sbjct: 518  LMLFHDF 524



 Score = 52.4 bits (124), Expect(2) = 3e-66
 Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
 Frame = -1

Query: 1523 ELFIKLVHNRLVERCPAAEPLISLPNEEETPAKK-GGRSKTRREV--TLEERALAAAIP 1356
            E F+KLV+   VERCPA EP++    ++E PAKK G +S    EV  T+E+R +AAA P
Sbjct: 148  ESFLKLVNAHFVERCPAPEPVLGQATKQEGPAKKRGAKSAKMVEVPETIEQRVIAAAAP 206


>emb|CBI26210.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score =  236 bits (603), Expect(2) = 7e-66
 Identities = 140/299 (46%), Positives = 189/299 (63%), Gaps = 11/299 (3%)
 Frame = -2

Query: 1297 GLKVGEKRKKDTVEWDSELDIMGGKKEPLWRVNFAEFINRLRIKVCVEYARAEYDNSAAV 1118
            G+ +G+KRK+D ++ D+E      K  P WR N+ E +  LR K C+E  RA  D+ AA+
Sbjct: 237  GVVIGKKRKQDALKLDTESGAASEKDVP-WRANYKELVCHLRHKACIENVRARLDSGAAI 295

Query: 1117 ILNSMLEGTKGTESTVS------LSLDSIFEEVIKTKEGLTMNLERIRGSLRQMDFCYE- 959
            +L++MLE T+  E  V       LS+ +I E V++++ G +M LERIR SL Q+  C+  
Sbjct: 296  VLSAMLEATQSAEKNVKEEISVLLSISTITEAVMQSEAGCSMTLERIRASLVQLG-CHPN 354

Query: 958  ---ANDVYSINLKDVIKKAQLEEVESIVKKRYGIEAFRMFRSLSNGRA-LDTDKISERTF 791
               A+  Y+I+LK +I+ AQ +EVES+V KRYG EA R+FR LS     L+T KIS+ TF
Sbjct: 355  GVGADRTYNIDLKKIIELAQNDEVESMVLKRYGREAHRIFRLLSKSCCPLETTKISDTTF 414

Query: 790  VDKKTTPQVLYKLWKDNYIQMEKITTGGPRQTDFFLWSVKKDNLWHHILDEMYHAALNLS 611
            ++KK   ++LYKLWKD  + MEKI     RQ+ F LW VKKD  W HILDEMYHAALNLS
Sbjct: 415  IEKKEAAKILYKLWKDECLHMEKIVLNESRQSQFMLWKVKKDTFWRHILDEMYHAALNLS 474

Query: 610  LRYAHEVDQERELLQIQNLGSGSVPQELERRKVHLRNVRILLDSSLMKLDDAIMLFHDF 434
            +       Q  EL + +++G+      L  R V L    ILL +SLMKLDDA+MLFHDF
Sbjct: 475  I-------QIIELRRDKHVGA------LRERDVRL---AILLQASLMKLDDALMLFHDF 517



 Score = 43.1 bits (100), Expect(2) = 7e-66
 Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
 Frame = -1

Query: 1517 FIKLVHNRLVERCPAAEPLISLPNEEETPAKK--GGRSKTRREVTLEERA-LAAAIP 1356
            F KLV+   VERCPA +P +  P+EE+TPA+K     +K   E+ + E+  +A A P
Sbjct: 154  FTKLVNAHYVERCPAPDPFLVPPDEEKTPARKHDANSAKAVEELEIGEQCDIAKATP 210


>gb|EOY23206.1| RNA polymerase III subunit RPC82 family protein, putative isoform 2
            [Theobroma cacao]
          Length = 463

 Score =  219 bits (557), Expect(2) = 8e-64
 Identities = 128/293 (43%), Positives = 171/293 (58%), Gaps = 1/293 (0%)
 Frame = -2

Query: 1309 SKSQGLKVGEKRKKDTVEWDSELDIMGGKKEPLWRVNFAEFINRLRIKVCVEYARAEYDN 1130
            + S  + VG+KRK D +E ++E +    ++  LWR NF EFI RLR K  +E  RA  D+
Sbjct: 233  NNSSSMTVGKKRKLDALESETEGEATD-EQVVLWRANFEEFIRRLRHKAFIENVRACLDD 291

Query: 1129 SAAVILNSMLEGTKGTESTVSLSLDSIFEEVIKTKEGLTMNLERIRGSLRQMDFCYEAND 950
             A +++++MLE T+  E  V                                        
Sbjct: 292  GAVIVISAMLEATRTAEKKV---------------------------------------- 311

Query: 949  VYSINLKDVIKKAQLEEVESIVKKRYGIEAFRMFRSLSN-GRALDTDKISERTFVDKKTT 773
                       K +  EVESIV KRYG +A+RMFR LS+  R L+TDKI++  FV+KK T
Sbjct: 312  -----------KTENSEVESIVLKRYGRDAYRMFRLLSSTARLLETDKIADTAFVEKKDT 360

Query: 772  PQVLYKLWKDNYIQMEKITTGGPRQTDFFLWSVKKDNLWHHILDEMYHAALNLSLRYAHE 593
             ++LYKLWKD+Y+ MEK+   G RQ+ F LW V K+ LW H+LDEM+HAALNLSLR AHE
Sbjct: 361  TKILYKLWKDDYLHMEKLQLTGARQSQFLLWKVNKNTLWEHVLDEMFHAALNLSLRVAHE 420

Query: 592  VDQERELLQIQNLGSGSVPQELERRKVHLRNVRILLDSSLMKLDDAIMLFHDF 434
            ++QE+ELL        ++PQ  ++R   LR VR+LL+SS MKLDDAIMLFHDF
Sbjct: 421  LEQEKELL--------NLPQ--DKRVNRLRKVRLLLESSQMKLDDAIMLFHDF 463



 Score = 53.9 bits (128), Expect(2) = 8e-64
 Identities = 29/59 (49%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
 Frame = -1

Query: 1523 ELFIKLVHNRLVERCPAAEPLISLPNEEETPAKKGGRSKTR---REVTLEERALAAAIP 1356
            E FIKL++   VERCPAAEP+++ P EEET A+K      +    + TLE+R L AA P
Sbjct: 152  EAFIKLLNAHFVERCPAAEPVLTKPTEEETSARKRVPKSAKILEGKETLEQRVLEAATP 210


>gb|ESW15419.1| hypothetical protein PHAVU_007G071300g [Phaseolus vulgaris]
          Length = 517

 Score =  250 bits (638), Expect = 1e-63
 Identities = 135/273 (49%), Positives = 182/273 (66%), Gaps = 9/273 (3%)
 Frame = -2

Query: 1225 KKEPLWRVNFAEFINRLRIKVCVEYARAEYDNSAAVILNSMLEGTKGTE------STVSL 1064
            ++E LWR NF EFI  +R K  +E  R ++D+  A +L+++LE TK  E      ++V L
Sbjct: 246  EEEILWRANFEEFIRHIRHKALIENIRTQHDDGTATVLSAVLEATKTVEKKVKMENSVPL 305

Query: 1063 SLDSIFEEVIKTKEGLTMNLERIRGSLRQMDFCYE--ANDVYSINLKDVIKKAQLEEVES 890
            SLD+I  EV+KT  G TM ++RIR SL Q+        +D YSI+LK +I++AQ EEVES
Sbjct: 306  SLDTITAEVMKTDTGRTMTIDRIRASLSQLGCSQRMIVDDAYSIDLKKIIERAQNEEVES 365

Query: 889  IVKKRYGIEAFRMFRSLSNGRAL-DTDKISERTFVDKKTTPQVLYKLWKDNYIQMEKITT 713
            IV KRYG +A+RMFR LS      DTD+I+  T V+KK  P++LY+LWKDNY+ MEK+  
Sbjct: 366  IVLKRYGRDAYRMFRLLSKDCCFHDTDQIAASTLVEKKEAPKLLYRLWKDNYLYMEKVIA 425

Query: 712  GGPRQTDFFLWSVKKDNLWHHILDEMYHAALNLSLRYAHEVDQERELLQIQNLGSGSVPQ 533
             G +QT   +W V K  +W H+LDEMYHAALNLSLR A E +++ ELL +        P 
Sbjct: 426  TGVKQTTILMWKVNKPLVWEHVLDEMYHAALNLSLRMAFEQEKDEELLNVPK-DKLKEPG 484

Query: 532  ELERRKVHLRNVRILLDSSLMKLDDAIMLFHDF 434
             L+++   L NV +LL SSLMKLD+A+MLFHDF
Sbjct: 485  PLQKKYKRLLNVWLLLGSSLMKLDEALMLFHDF 517


>ref|XP_002321920.2| RNA polymerase 3 subunit RPC82 family protein [Populus trichocarpa]
            gi|550322612|gb|EEF06047.2| RNA polymerase 3 subunit
            RPC82 family protein [Populus trichocarpa]
          Length = 520

 Score =  223 bits (568), Expect(2) = 1e-63
 Identities = 130/296 (43%), Positives = 187/296 (63%), Gaps = 11/296 (3%)
 Frame = -2

Query: 1288 VGEKRKKDTVEWDSELDIMGGKKEPLWRVNFAEFINRLRIKVCVEYARAEYDNSAAVILN 1109
            +G+KRK D +E D +  +   K+  LWRVNF EFI RLR K+C+E  R   D+ AA +  
Sbjct: 237  IGDKRKLDALESDIDGGV-ADKQVALWRVNFEEFIRRLRHKICIETVRTRLDDEAATVFT 295

Query: 1108 SMLEGTKGTE------STVSLSLDSIFEEVIKTKEGLTMNLERIRGSLRQMD----FCYE 959
            +ML+ ++  E      S+V LS +SI+ EVIK+++G  M L+ +   L  +     F   
Sbjct: 296  AMLDASRSEEKKIKTASSVPLSENSIYAEVIKSEKGRNMTLDYVISVLVGLSSSPPFVRV 355

Query: 958  ANDVYSINLKDVIKKAQLEEVESIVKKRYGIEAFRMFRSLSN-GRALDTDKISERTFVDK 782
             ++ YSI+ K  I+ AQ +E  SIV K+YG +A+RMFR LS  G  L+TDKIS+  F++K
Sbjct: 356  VDNSYSIDFKHTIEVAQTDE--SIVYKKYGKDAYRMFRLLSKAGCLLETDKISDSIFLEK 413

Query: 781  KTTPQVLYKLWKDNYIQMEKITTGGPRQTDFFLWSVKKDNLWHHILDEMYHAALNLSLRY 602
            K T  +L K+W+ +Y+QMEK+  G    T F LW V   NL   +LD+M+HAALNLSLR 
Sbjct: 414  KETANILSKMWQGDYLQMEKLIAG---PTQFLLWKVNMINLRERVLDDMFHAALNLSLRV 470

Query: 601  AHEVDQERELLQIQNLGSGSVPQELERRKVHLRNVRILLDSSLMKLDDAIMLFHDF 434
            A+E++Q++E+L +       V   ++ +   L+ VR LL+SS MKLDDAIM+FHDF
Sbjct: 471  AYELEQQKEILHL------GVDGPMKEKYEKLKKVRFLLESSRMKLDDAIMIFHDF 520



 Score = 48.9 bits (115), Expect(2) = 1e-63
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
 Frame = -1

Query: 1511 KLVHNRLVERCPAAEPLISLPNEEE-TPAKKGGRSKTR---REVTLEERALAAAIP 1356
            KLV  R VERCP +EP ++LP+EEE  P ++ G    +      TLE+R L AA+P
Sbjct: 153  KLVMARYVERCPISEPFLALPSEEEAAPVRRRGAKSAKAFLEPETLEQRVLVAAVP 208


>ref|XP_002872419.1| RNA polymerase III subunit RPC82 family protein [Arabidopsis lyrata
            subsp. lyrata] gi|297318256|gb|EFH48678.1| RNA polymerase
            III subunit RPC82 family protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 521

 Score =  229 bits (584), Expect(2) = 7e-63
 Identities = 128/286 (44%), Positives = 176/286 (61%), Gaps = 15/286 (5%)
 Frame = -2

Query: 1246 ELDIMGGKKEPLWRVNFAEFINRLRIKVCVEYARAEYDNSAAVILNSMLEGTKG------ 1085
            ++D        +WR NF EFI+RLR K CVE  +   D   A++L +MLE  +       
Sbjct: 240  DVDSSDPSSRVIWRPNFEEFIHRLRHKACVEIVKERRDEGCAIVLRAMLEVGRPQEKKVK 299

Query: 1084 TESTVSLSLDSIFEEVIKTKEGLTMNLERIRGSLRQMD--------FCYEANDVYSINLK 929
            T+++  +S+ SI+EEVIKT+ G TM  ER+   L Q+         F  E ND Y ++ K
Sbjct: 300  TDNSAPMSVGSIYEEVIKTEAGRTMLQERVEACLDQLSATSSYLPAFVTEMNDSYIVDFK 359

Query: 928  DVIKKAQLEEVESIVKKRYGIEAFRMFRSLSN-GRALDTDKISERTFVDKKTTPQVLYKL 752
             +I  AQ +E+E++V +RYG EAFRMFR LS  GR +DTDKI++    +KK TPQ+L K+
Sbjct: 360  SIISVAQKDEIEAVVMRRYGKEAFRMFRYLSQEGRFVDTDKIADAALTEKKDTPQILLKM 419

Query: 751  WKDNYIQMEKITTGGPRQTDFFLWSVKKDNLWHHILDEMYHAALNLSLRYAHEVDQEREL 572
            WKD Y+ M+K+   G     F LW V K  +   +LDEMYHA+LNL+LR AHE++ E+EL
Sbjct: 420  WKDGYLHMQKLAITGT-YVPFLLWKVNKLIVTRQMLDEMYHASLNLNLRLAHELESEKEL 478

Query: 571  LQIQNLGSGSVPQELERRKVHLRNVRILLDSSLMKLDDAIMLFHDF 434
            L    L S  +   L+ R   +R  R+LL S++ KLDDAIMLFHDF
Sbjct: 479  LM---LPSDKLEGPLKERVKKVRAKRLLLSSTMFKLDDAIMLFHDF 521



 Score = 40.4 bits (93), Expect(2) = 7e-63
 Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
 Frame = -1

Query: 1511 KLVHNRLVERCPAAEPLISLPNEEETPAKKGGRSKT---RREVTLEERALAAAIPM 1353
            KLV  R VER P+ EP+  L N+++ PAKK G       +   TLEER + AA P+
Sbjct: 154  KLVAARFVERIPSPEPV--LGNKDQEPAKKRGAKAAKILKEPETLEERVVEAATPV 207


>ref|XP_002875937.1| RNA polymerase III subunit RPC82 family protein [Arabidopsis lyrata
            subsp. lyrata] gi|297321775|gb|EFH52196.1| RNA polymerase
            III subunit RPC82 family protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 521

 Score =  226 bits (576), Expect(2) = 3e-62
 Identities = 127/299 (42%), Positives = 181/299 (60%), Gaps = 15/299 (5%)
 Frame = -2

Query: 1285 GEKRKKDTVEWDSELDIMGGKKEPLWRVNFAEFINRLRIKVCVEYARAEYDNSAAVILNS 1106
            G+++++D    D    +       +W  N+ EFI+RLR K CVE  +   D   A++L +
Sbjct: 234  GKRKQRDVDSSDPSSGV-------IWHPNYEEFIHRLRHKACVEIVKERRDEGCAIVLRA 286

Query: 1105 MLEGTKG------TESTVSLSLDSIFEEVIKTKEGLTMNLERIRGSLRQMD--------F 968
            MLE  +       T+++  +S+ SI+EEVIKT+ G TM  ER+   L Q+         F
Sbjct: 287  MLEVGRSQEKKVKTDNSAPMSIGSIYEEVIKTEAGRTMLQERVEACLDQLSATSSYLPAF 346

Query: 967  CYEANDVYSINLKDVIKKAQLEEVESIVKKRYGIEAFRMFRSLSN-GRALDTDKISERTF 791
              E ND Y ++ K +I  AQ +E+E++V +RYG EAFRMFR LS  GR ++TDKI++   
Sbjct: 347  VTEMNDSYIVDFKSIISVAQKDEIEAVVMRRYGKEAFRMFRYLSQEGRFVETDKIADAAL 406

Query: 790  VDKKTTPQVLYKLWKDNYIQMEKITTGGPRQTDFFLWSVKKDNLWHHILDEMYHAALNLS 611
             +KK TPQ L K+WKD Y+ M+K+   G     F LW V K  +   +LDEMYHA+LNL+
Sbjct: 407  TEKKDTPQFLLKMWKDGYLHMQKLAITGT-YVPFLLWKVNKLIVTRQMLDEMYHASLNLN 465

Query: 610  LRYAHEVDQERELLQIQNLGSGSVPQELERRKVHLRNVRILLDSSLMKLDDAIMLFHDF 434
            LR AHE++ E+ELL    L S  +   L+ R + +R  R+LL S++ KLDDAIMLFHDF
Sbjct: 466  LRLAHELESEKELLM---LPSDKLEGPLKERVIKVRAKRLLLSSTMFKLDDAIMLFHDF 521



 Score = 41.6 bits (96), Expect(2) = 3e-62
 Identities = 26/56 (46%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
 Frame = -1

Query: 1511 KLVHNRLVERCPAAEPLISLPNEEETPAKKGGRSKT---RREVTLEERALAAAIPM 1353
            KLV  R VER P+ EP+  L N+E+ PAKK G       +   TLEER + AA P+
Sbjct: 154  KLVAARFVERIPSPEPV--LGNKEQEPAKKRGAKAAKILKEPETLEERVVEAATPV 207