BLASTX nr result
ID: Achyranthes23_contig00011522
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00011522
(2319 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD20832.1| sigma factor [Spinacia oleracea] 818 0.0
ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citr... 505 e-140
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [... 504 e-140
ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-... 502 e-139
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ... 502 e-139
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera] 493 e-136
gb|EMJ24122.1| hypothetical protein PRUPE_ppa003696mg [Prunus pe... 488 e-135
ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-... 485 e-134
gb|EOY29838.1| RNApolymerase sigma-subunit C, putative [Theobrom... 482 e-133
ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Popu... 476 e-131
ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-... 469 e-129
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-... 465 e-128
ref|XP_003551127.1| PREDICTED: RNA polymerase sigma factor sigC ... 441 e-121
ref|XP_004498453.1| PREDICTED: RNA polymerase sigma factor sigC-... 436 e-119
ref|XP_004148429.1| PREDICTED: RNA polymerase sigma factor sigC-... 430 e-117
ref|XP_003588449.1| RNA polymerase sigma-B factor [Medicago trun... 417 e-113
gb|ESW33313.1| hypothetical protein PHAVU_001G059800g [Phaseolus... 416 e-113
ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp.... 412 e-112
dbj|BAA22215.1| plastid RNA polymerase sigma-subunit [Arabidopsi... 404 e-110
gb|ESW33314.1| hypothetical protein PHAVU_001G059800g [Phaseolus... 403 e-109
>emb|CAD20832.1| sigma factor [Spinacia oleracea]
Length = 548
Score = 818 bits (2112), Expect = 0.0
Identities = 421/550 (76%), Positives = 477/550 (86%), Gaps = 12/550 (2%)
Frame = +1
Query: 112 CKLNIMMRWGFPSLRSPFTTNSS----TSFRGKESDFNSARLSLLTIGFDESEMLHKDTL 279
CKLN MMR PSLRSPFTTNSS TSFRGKE DF SARLSLLTIGFDESE L KDTL
Sbjct: 5 CKLN-MMRCVLPSLRSPFTTNSSPPCSTSFRGKELDFGSARLSLLTIGFDESETLRKDTL 63
Query: 280 RQHACSSSASLTVDDDYSNLEVAISKKSRKGLHNMINDTQVISDRDTSVYVRSIRACSAS 459
R HA SSS LTV++DYSNLE ISK+S K L I+DT+V+SDRD SVYVRS+++CSAS
Sbjct: 64 RPHAGSSSVPLTVENDYSNLETTISKRSCKDL---ISDTEVLSDRDVSVYVRSVQSCSAS 120
Query: 460 HFHVLMENINVLENRVSDSE--KLETDILVQLGRLGALQLFHDCLSRTAEMLASPPPPPQ 633
HFH LM NIN+LEN+VSDSE KLE DILVQLGRLGALQLFH CLSR +M P
Sbjct: 121 HFHTLMANINLLENKVSDSELLKLEKDILVQLGRLGALQLFHACLSRIIDM---SDLPGL 177
Query: 634 VTEDSRQNDQIDSDLKKIVVYSKRKEARKLRQEKRLQAT------CRSESSKRSSMHQMV 795
+TED + N + D++LKK +V+SKRKE RKLRQE+RLQA+ C+SESS SS+H +V
Sbjct: 178 ITEDGKANVRKDNELKKKLVFSKRKEERKLRQERRLQASTSKRCACKSESSIESSIHHVV 237
Query: 796 SSSAKKTKARGRRAIIAKNEAEMSRGVKLAAQLEQVKATLEKETGRAVSLNCWAEAAGID 975
S++AKKTKARGRRAIIAKNEAEMSRG+K+ AQLE+VK TLEKETG+AVSLNCWAEAAGID
Sbjct: 238 STAAKKTKARGRRAIIAKNEAEMSRGIKVVAQLEKVKLTLEKETGKAVSLNCWAEAAGID 297
Query: 976 VKALKHDLHFGWYCRDELIKSGRSLVLYLARYYRGQGVAYEDLIQAGNIGILQGAERFDH 1155
K L+HDLHFGWYCRDEL+KSGRSLVLYL+RYYRG GVA+EDL+QAGNIGILQGAERFDH
Sbjct: 298 EKVLQHDLHFGWYCRDELLKSGRSLVLYLSRYYRGLGVAHEDLMQAGNIGILQGAERFDH 357
Query: 1156 TRGYQFSTYVQYWIRKAMSQLVARHGRGIKVPVALSTTINRVQKARKSLKRSLGKHPDDV 1335
TRGYQFSTYVQYWIRKAMSQLV+RHGRGIKVP LSTTINRVQKARK LKRS GKHPDDV
Sbjct: 358 TRGYQFSTYVQYWIRKAMSQLVSRHGRGIKVPTTLSTTINRVQKARKILKRSQGKHPDDV 417
Query: 1336 EVAKFTGLTLEKVKSADNCLRIVGSLDQKIGDFINMKYLECTPDTSIKIPEKVVTKQHMK 1515
EV+K TGL+L+K+KSADNCLRIVGSLDQK+G FINMKYLECTPDT++++PEK V KQHM+
Sbjct: 418 EVSKSTGLSLDKIKSADNCLRIVGSLDQKVGHFINMKYLECTPDTALEMPEKTVMKQHMR 477
Query: 1516 NDINKLLQHLDPKEKRVMILRYGLGGHCMSLHEVGKIFDVSKEWIRKLEKRALTKLKSEE 1695
ND++KLLQ LDPKE+RV+I RYGL GHCMSLHEVGK+FDVSKEWIRK+EKRALTKL++E+
Sbjct: 478 NDVHKLLQELDPKERRVLIHRYGLEGHCMSLHEVGKVFDVSKEWIRKMEKRALTKLRTEQ 537
Query: 1696 NQRSLMHYLN 1725
NQ +L HYLN
Sbjct: 538 NQTNLKHYLN 547
>ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|557553989|gb|ESR64003.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 534
Score = 505 bits (1301), Expect = e-140
Identities = 268/545 (49%), Positives = 372/545 (68%), Gaps = 14/545 (2%)
Frame = +1
Query: 130 MRWGFPSLRSPFTTNS----STSFRGKESDFNSARLSLLTIGFDESEMLHKDTLRQHACS 297
++W P FTT+S STS RG+E FNSARLS L+ ++S +D ++ + CS
Sbjct: 9 LKWVSPVQSHFFTTSSCRLSSTSVRGREGSFNSARLSFLSTISEDSASYFQDPVKAYTCS 68
Query: 298 SSASLTVDDDYSNLEVAISKKSRKGLHNMINDTQVISDRDTSVYVRSIRACSASHFHVLM 477
+ TV++DYS +T+ I + TS + A S S F +LM
Sbjct: 69 FVNTQTVENDYS-------------------ETEEIRQKSTSCIGQD--ASSRSDFRLLM 107
Query: 478 ENINVLENRVSDSE--KLETDILVQLGRLGALQLFHDCLSRTAEMLASPPPPPQVTEDSR 651
EN++VLE+ +DS+ +LE +IL QLG+LGAL+LF+ LSR + TE+ +
Sbjct: 108 ENLDVLESTFADSDALRLEREILQQLGKLGALKLFNSHLSRIVKTSNVLDLSDVHTEEQK 167
Query: 652 QNDQIDSDLKKIVVYSKRKEARKLRQEKRLQATCR-------SESSKRSSMHQMVSSSAK 810
ND D + KI+V SKRK RKL+ + + + SE+ + + S +
Sbjct: 168 MNDSRDYHMGKILVPSKRKGKRKLKTARVSEESIETSLLSLPSEALQEGLKQPTIFSPER 227
Query: 811 KTKARGRRAIIAKNEAEMSRGVKLAAQLEQVKATLEKETGRAVSLNCWAEAAGIDVKALK 990
+RGRR +IA+NEAEMS+GV++ A LE++K TLEKE+G+A SLNCWA+AAG+ + LK
Sbjct: 228 ALNSRGRRLMIARNEAEMSKGVQVVANLERIKTTLEKESGKAASLNCWAQAAGVSERVLK 287
Query: 991 HDLHFGWYCRDELIKSGRSLVLYLARYYRGQGVAYEDLIQAGNIGILQGAERFDHTRGYQ 1170
L FGWYCR+ELIKS R LVL+LAR YRG G+ + DL+QAGN+G+LQGAERFDHTRGY+
Sbjct: 288 QHLAFGWYCREELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYK 347
Query: 1171 FSTYVQYWIRKAMSQLVARHGRGIKVPVALSTTINRVQKARKSLKRSLGKHPDDVEVAKF 1350
FSTYVQYWIRK++S++VARH RGIK+P L+ I+++QKARK+L S GK+P+D+E+AK+
Sbjct: 348 FSTYVQYWIRKSISKMVARHARGIKIPCKLNREISKIQKARKALTNSHGKYPEDIEIAKY 407
Query: 1351 TGLTLEKVKSADNCLRIVGSLDQKIGDFINMKYLECTPDTSIKIPEKVVTKQHMKNDINK 1530
TGL+L +++SA CLRIVGS+DQKIGD +N KYLE PD S+K P+++V +QHMK D+ +
Sbjct: 408 TGLSLAEIRSASECLRIVGSIDQKIGDCLNAKYLEFAPDRSVKSPKEIVMRQHMKKDVFR 467
Query: 1531 LLQHLDPKEKRVMILRYGLGGH-CMSLHEVGKIFDVSKEWIRKLEKRALTKLKSEENQRS 1707
+L+ LD +E++V++LRYGL H SL E+GK+F VSKEWIRKLEK+A+TKL+ E R
Sbjct: 468 ILESLDSRERQVLVLRYGLNDHRPKSLEEIGKLFHVSKEWIRKLEKKAMTKLRDSETCRD 527
Query: 1708 LMHYL 1722
L H+L
Sbjct: 528 LSHFL 532
>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 560
Score = 504 bits (1297), Expect = e-140
Identities = 276/557 (49%), Positives = 386/557 (69%), Gaps = 20/557 (3%)
Frame = +1
Query: 115 KLNIMMRWGFPSLRSPFTTNSSTS---FRGKESDFNSARLSLLTIGFDESEMLHKDTLRQ 285
+LN+ + + F S SP +SS S RG+E+ +RLS L++ +E ++ H+D L+
Sbjct: 6 RLNLKLDFPFHSPNSPSRLSSSPSSSFVRGREATSYQSRLSFLSVISEEGDIAHRDPLKT 65
Query: 286 HACSSSASLTVDDDYSNLE---VAISKKSRKGLHNMINDTQVISDRDTSVYVRSIRACSA 456
+A S + TV++++S E V K+S GL N+I D +V D V S +
Sbjct: 66 YAYSYAVQ-TVENEHSQGEGFKVNFGKRSHFGL-NIIGDAEVSLKEDIFVSPSSTKE-RT 122
Query: 457 SHFHVLMENINVLENRVSDSE--KLETDILVQLGRLGALQLFHDCLSRTAE---MLASPP 621
S F +L+EN+N+LE +DS+ KLE DIL+QLG+LGAL+LF+ CL+RT E +L
Sbjct: 123 SRFSLLLENLNILEQSFADSDASKLEEDILLQLGKLGALKLFNTCLTRTLETTNVLEVSD 182
Query: 622 PPPQVTEDSRQNDQIDSDLKKIVVYSKRKEARKLRQE--------KRLQATCRSESSKRS 777
++ + N ++ K+VV++ +KE RK R+E K S +
Sbjct: 183 VHTEIIGECNINGTSINNQIKVVVHTAKKEERKSRRERASARKGHKSPSLPLPSRPIQSG 242
Query: 778 SMHQMVSSSAKKTKARGRRAIIAKNEAEMSRGVKLAAQLEQVKATLEKETGRAVSLNCWA 957
S VSS K +K++ RR IIA+NEAEM+RG+K+ A LE+++ TLE+ET R VSL+CWA
Sbjct: 243 SEKPTVSSGKKASKSKSRRLIIARNEAEMARGIKVLADLEKIRTTLEEETERVVSLSCWA 302
Query: 958 EAAGIDVKALKHDLHFGWYCRDELIKSGRSLVLYLARYYRGQGVAYEDLIQAGNIGILQG 1137
EAAG+DVK L+ L FGWYCRDELIKS RSLVLY AR YRG G+A EDL+QAGN+G+L+G
Sbjct: 303 EAAGLDVKVLQQQLSFGWYCRDELIKSTRSLVLYFARNYRGTGIALEDLLQAGNLGVLEG 362
Query: 1138 AERFDHTRGYQFSTYVQYWIRKAMSQLVARHGRGIKVPVALSTTINRVQKARKSLKRSLG 1317
AERFDHTRGY+FSTYVQYWIRK+MS++V+R RGI++P LS I ++QKARK+L S G
Sbjct: 363 AERFDHTRGYRFSTYVQYWIRKSMSKIVSRLARGIQIPCTLSRAIYQIQKARKALTTSNG 422
Query: 1318 KHPDDVEVAKFTGLTLEKVKSADNCLRIVGSLDQKIGDFINMKYLECTPDTSIKIPEKVV 1497
K+PDD E+AK+TGL+L K++SA CLR+VGS+DQKIG+ +N KYLE PDTS++ PE+VV
Sbjct: 423 KYPDDDEIAKYTGLSLAKIESASRCLRVVGSIDQKIGESLNAKYLEFLPDTSVQSPEEVV 482
Query: 1498 TKQHMKNDINKLLQHLDPKEKRVMILRYGLGGH-CMSLHEVGKIFDVSKEWIRKLEKRAL 1674
+QHM D++ LL+ LD +E++V+ILR+GL + SL E+G+ F VSKEW+R+LEKR +
Sbjct: 483 MRQHMIQDMHNLLRSLDSRERQVLILRFGLNDYQPKSLEEIGRHFHVSKEWVRRLEKRVM 542
Query: 1675 TKLKSEENQRSLMHYLN 1725
T+L++EE R+L HY+N
Sbjct: 543 TRLRNEETCRNLRHYIN 559
>ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-like [Citrus sinensis]
Length = 534
Score = 502 bits (1293), Expect = e-139
Identities = 266/545 (48%), Positives = 372/545 (68%), Gaps = 14/545 (2%)
Frame = +1
Query: 130 MRWGFPSLRSPFTTNS----STSFRGKESDFNSARLSLLTIGFDESEMLHKDTLRQHACS 297
++W P FTT+S STS RG+E FNSARLS L+ ++S +D ++ + CS
Sbjct: 9 LKWVSPVQSHFFTTSSCRLSSTSVRGREGSFNSARLSFLSTISEDSASYFQDPVKAYTCS 68
Query: 298 SSASLTVDDDYSNLEVAISKKSRKGLHNMINDTQVISDRDTSVYVRSIRACSASHFHVLM 477
+ TV++DYS +T+ I + TS + A S S F +LM
Sbjct: 69 FVNTQTVENDYS-------------------ETEEIRQKSTSCIGQD--ASSRSDFRLLM 107
Query: 478 ENINVLENRVSDSE--KLETDILVQLGRLGALQLFHDCLSRTAEMLASPPPPPQVTEDSR 651
EN++VLE+ +DS+ +LE +IL QLG+LGAL+LF+ LSR + TE+ +
Sbjct: 108 ENLDVLESTFADSDALRLEREILQQLGKLGALKLFNSHLSRIVKTSNVLDLSDVHTEEQK 167
Query: 652 QNDQIDSDLKKIVVYSKRKEARKLRQEKRLQATCR-------SESSKRSSMHQMVSSSAK 810
+D D + KI+V SKRK RKL+ + + + SE+ + + S+ +
Sbjct: 168 MDDSRDYHMGKILVPSKRKGKRKLKTARVSEESIETYLLSLPSEALQEGLKQPTIFSAER 227
Query: 811 KTKARGRRAIIAKNEAEMSRGVKLAAQLEQVKATLEKETGRAVSLNCWAEAAGIDVKALK 990
+RGRR +IA+NEAEMS+GV++ A LE++K TLEKE+G+A LNCWA+AAG+ + LK
Sbjct: 228 ALNSRGRRLMIARNEAEMSKGVQVVANLERIKTTLEKESGKAARLNCWAQAAGVSERVLK 287
Query: 991 HDLHFGWYCRDELIKSGRSLVLYLARYYRGQGVAYEDLIQAGNIGILQGAERFDHTRGYQ 1170
L FGWYCR+ELIKS R LVL+LAR YRG G+ + DL+QAGN+G+LQGAERFDHTRGY+
Sbjct: 288 QHLAFGWYCREELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYK 347
Query: 1171 FSTYVQYWIRKAMSQLVARHGRGIKVPVALSTTINRVQKARKSLKRSLGKHPDDVEVAKF 1350
FSTYVQYWIRK++S++VARH RGIK+P L+ I+++QKARK+L S GK+P+D+E+AK+
Sbjct: 348 FSTYVQYWIRKSISKMVARHARGIKIPCKLNREISKIQKARKALTNSHGKYPEDIEIAKY 407
Query: 1351 TGLTLEKVKSADNCLRIVGSLDQKIGDFINMKYLECTPDTSIKIPEKVVTKQHMKNDINK 1530
TGL+L +++SA CLRIVGS+DQKIGD +N KYLE PD S+K P+++V +QHMK D+ +
Sbjct: 408 TGLSLAEIRSASECLRIVGSIDQKIGDCLNAKYLEFAPDRSVKSPKEIVMRQHMKKDVFR 467
Query: 1531 LLQHLDPKEKRVMILRYGLGGH-CMSLHEVGKIFDVSKEWIRKLEKRALTKLKSEENQRS 1707
+L+ LD +E++V++LRYGL H SL E+GK+F VSKEWIRKLEK+A+TKL+ E R
Sbjct: 468 ILESLDSRERQVLVLRYGLNDHRPKSLEEIGKLFHVSKEWIRKLEKKAMTKLRDSETCRD 527
Query: 1708 LMHYL 1722
L H+L
Sbjct: 528 LSHFL 532
>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
gi|296081598|emb|CBI20603.3| unnamed protein product
[Vitis vinifera]
Length = 561
Score = 502 bits (1293), Expect = e-139
Identities = 269/553 (48%), Positives = 373/553 (67%), Gaps = 21/553 (3%)
Frame = +1
Query: 130 MRWGFPSLRSPFTTNS-----STSFRGKESDFNSARLSLLTIGFDESEMLHKDTLRQHAC 294
++W FP + P TNS ++S +GKE+ F+S R S ++ ++ E L+KD + AC
Sbjct: 9 LKWDFP-ISCPTLTNSPSRLCTSSVQGKEASFDSTRFSFPSVTSEDCESLYKDPFKPFAC 67
Query: 295 SSSASLTVDDDYSNLE---VAISKKSRKGLHNMINDTQVISDRDTSVYVRSIRACSASHF 465
SS A T ++DYS +E + I K S L ++N +Q D S V ++A AS F
Sbjct: 68 SSGALQTFENDYSAMEAMKMKIGKCSHGDLFKIVNASQAPIGEDISASVAGLQASKASQF 127
Query: 466 HVLMENINVLENRVSDSE--KLETDILVQLGRLGALQLFHDCLSRTAEMLASPP---PPP 630
+L+EN+++LE +DS +LE DI+VQLGRLGAL+LF CLSRT + S P
Sbjct: 128 SLLLENLDILEEMFADSNMVRLERDIMVQLGRLGALKLFQICLSRTLKTSTSFDLFSAPT 187
Query: 631 QVTEDSRQNDQIDSDLKKIVVYSKRKEARKLRQEKRLQATCR-------SESSKRSSMHQ 789
+ + + N +D L K+VV S +KE RK ++E+ L+ S++ ++
Sbjct: 188 EHIRECQTNGTVDDHLDKVVVRSGKKEERKSKRERALEKADNIYAFPLPSKTIRKGPGRP 247
Query: 790 MVSSSAKKTKARGRRAIIAKNEAEMSRGVKLAAQLEQVKATLEKETGRAVSLNCWAEAAG 969
VS+ + +R +R + AKNEAEMS+GVKL A LE+++ATLE+E G SL+ WAEAAG
Sbjct: 248 SVSTVKRTLNSRRKRLMNAKNEAEMSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAG 307
Query: 970 IDVKALKHDLHFGWYCRDELIKSGRSLVLYLARYYRGQGVAYEDLIQAGNIGILQGAERF 1149
+D K L+ L FGWYCRDEL++S SLVLY+AR YRG GVA+ED++QAGN+G+LQGAERF
Sbjct: 308 VDKKVLQQQLQFGWYCRDELLRSTHSLVLYIARNYRGMGVAFEDILQAGNLGVLQGAERF 367
Query: 1150 DHTRGYQFSTYVQYWIRKAMSQLVARHGRGIKVPVALSTTINRVQKARKSLKRSLGKHPD 1329
DHT+GY+FSTYVQYWIRK+MS LVARH RG+K+P L+ I ++QKARK+L +S G++PD
Sbjct: 368 DHTKGYRFSTYVQYWIRKSMSTLVARHARGVKIPFTLNRAIGQIQKARKALYKSHGRYPD 427
Query: 1330 DVEVAKFTGLTLEKVKSADNCLRIVGSLDQKIGDFINMKYLECTPDTSIKIPEKVVTKQH 1509
D E+AKFTGL+L K++SA NCLR+VGS DQ D LE TPDTSIK PE+ +Q
Sbjct: 428 DNEIAKFTGLSLAKIRSAGNCLRVVGSTDQSFQDCWGATILEFTPDTSIKSPEEGFMQQC 487
Query: 1510 MKNDINKLLQHLDPKEKRVMILRYGLG-GHCMSLHEVGKIFDVSKEWIRKLEKRALTKLK 1686
+ DI+ LL+ LDP+E+++++LRYG G SL E+G+ F+VSKEWIRKLEK AL L+
Sbjct: 488 KRKDIHNLLKGLDPRERQILVLRYGFGEQQRKSLEEIGRRFNVSKEWIRKLEKTALANLR 547
Query: 1687 SEENQRSLMHYLN 1725
EE ++L HY++
Sbjct: 548 DEEICQNLRHYVD 560
>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
Length = 611
Score = 493 bits (1270), Expect = e-136
Identities = 261/528 (49%), Positives = 360/528 (68%), Gaps = 16/528 (3%)
Frame = +1
Query: 190 RGKESDFNSARLSLLTIGFDESEMLHKDTLRQHACSSSASLTVDDDYSNLE---VAISKK 360
+GKE+ F+S R S ++ ++ E L+KD + ACSS A T ++DYS +E + I K
Sbjct: 83 QGKEASFDSTRFSFPSVTSEDCESLYKDPFKPFACSSGALQTFENDYSAMEAMKMKIGKC 142
Query: 361 SRKGLHNMINDTQVISDRDTSVYVRSIRACSASHFHVLMENINVLENRVSDSE--KLETD 534
S L ++N +Q D S V ++A AS F +L+EN+++LE +DS +LE D
Sbjct: 143 SHGDLFKIVNASQAPIGEDISASVAGLQASKASQFSLLLENLDILEEMFADSNMVRLERD 202
Query: 535 ILVQLGRLGALQLFHDCLSRTAEMLASPP---PPPQVTEDSRQNDQIDSDLKKIVVYSKR 705
I+VQLGRLGAL+LF CLSRT + S P + + + N +D L K+VV S +
Sbjct: 203 IMVQLGRLGALKLFQICLSRTLKTSTSFDLFSAPTEHIRECQTNGTVDDHLDKVVVRSGK 262
Query: 706 KEARKLRQEKRLQATCR-------SESSKRSSMHQMVSSSAKKTKARGRRAIIAKNEAEM 864
KE RK ++E+ L+ S++ ++ VS+ + +R +R + AKNEAEM
Sbjct: 263 KEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRTLNSRRKRLMNAKNEAEM 322
Query: 865 SRGVKLAAQLEQVKATLEKETGRAVSLNCWAEAAGIDVKALKHDLHFGWYCRDELIKSGR 1044
S+GVKL A LE+++ATLE+E G SL+ WAEAAG+D K L+ L FGWYCRDEL++S
Sbjct: 323 SKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDKKVLQQQLQFGWYCRDELLRSTH 382
Query: 1045 SLVLYLARYYRGQGVAYEDLIQAGNIGILQGAERFDHTRGYQFSTYVQYWIRKAMSQLVA 1224
SLVLY+AR YRG GVA+ED++QAGN+G+LQGAERFDHT+GY+FSTYVQYWIRK+MS LVA
Sbjct: 383 SLVLYIARNYRGMGVAFEDILQAGNLGVLQGAERFDHTKGYRFSTYVQYWIRKSMSTLVA 442
Query: 1225 RHGRGIKVPVALSTTINRVQKARKSLKRSLGKHPDDVEVAKFTGLTLEKVKSADNCLRIV 1404
RH RG+K+P L+ I ++QKARK+L +S G++PDD E+AKFTGL+L K++SA NCLR+V
Sbjct: 443 RHARGVKIPFTLNRAIGQIQKARKALYKSHGRYPDDNEIAKFTGLSLAKIRSAGNCLRVV 502
Query: 1405 GSLDQKIGDFINMKYLECTPDTSIKIPEKVVTKQHMKNDINKLLQHLDPKEKRVMILRYG 1584
GS DQ D LE TPDTSIK PE+ +Q + DI+ LL+ LDP+E+++++LRYG
Sbjct: 503 GSTDQSFQDCWGATILEFTPDTSIKSPEEGFMQQCKRKDIHNLLKGLDPRERQILVLRYG 562
Query: 1585 LG-GHCMSLHEVGKIFDVSKEWIRKLEKRALTKLKSEENQRSLMHYLN 1725
G SL E+G+ F+VSKEWIRKLEK AL L+ EE ++L HY++
Sbjct: 563 FGEQQRKSLEEIGRRFNVSKEWIRKLEKTALANLRDEEICQNLRHYVD 610
>gb|EMJ24122.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica]
Length = 555
Score = 488 bits (1256), Expect = e-135
Identities = 265/548 (48%), Positives = 370/548 (67%), Gaps = 16/548 (2%)
Frame = +1
Query: 130 MRWGFPSLRSPFTTNS-----STSFRGKESDFNSARLSLLTIGFDESEMLHKDTLRQHAC 294
++ GFP S + T S STS RG+E FNSARLS L++ +E E KD L+ +
Sbjct: 9 LKCGFPVHSSHWQTTSPSKISSTSVRGREGSFNSARLSFLSVISEEGEASSKDPLKVYTF 68
Query: 295 SSSASLTVDDDYSNLEVAISKKSRKGLHNMINDTQVISDRDTSVYVRSIRACSASHFHVL 474
S++ ++D S LE K + + + +D Q+ + + + AC+ASHF +L
Sbjct: 69 PSASPQILEDGVSELEEV--KTAFRRVPKSFSDNQMPVAEGKFISSKGLEACTASHFSLL 126
Query: 475 MENINVLENRVSDSE--KLETDILVQLGRLGALQLFHDCLSRT---AEMLASPPPPPQVT 639
++N+NVLE + S+ KLE +IL+QL RLGAL+LF CLSRT + L P
Sbjct: 127 LQNLNVLEETFATSDVLKLEKEILLQLARLGALKLFDICLSRTLKTSSFLDLSDIPTVPV 186
Query: 640 EDSRQNDQIDSDLKKIVVYSKRKEARKLRQEKRLQATCRSESSKRSSMHQ-----MVSSS 804
E+ + + D+++ +I+V S +KE R+ R+ A S S ++ + +SS
Sbjct: 187 EEGKMERKEDNNVGEIIVRSGKKEERRSRKRTSDNAIVSSNSLPPKTIWKGLKKPTLSSG 246
Query: 805 AKKTKARGRRAIIAKNEAEMSRGVKLAAQLEQVKATLEKETGRAVSLNCWAEAAGIDVKA 984
+ + R RR I+KNEAEMS GVK+ A LE++K TLEKETG+ +L CWAEAAG+ K
Sbjct: 247 KRASNYRSRRLTISKNEAEMSIGVKVIADLERIKETLEKETGKVATLRCWAEAAGVHEKV 306
Query: 985 LKHDLHFGWYCRDELIKSGRSLVLYLARYYRGQGVAYEDLIQAGNIGILQGAERFDHTRG 1164
L L FGWYC+DELI+S RSLVLYLAR YRG GVA +DL+QAGN+G+LQGAERFDH+RG
Sbjct: 307 LLQHLRFGWYCQDELIRSTRSLVLYLARNYRGLGVALDDLMQAGNLGLLQGAERFDHSRG 366
Query: 1165 YQFSTYVQYWIRKAMSQLVARHGRGIKVPVALSTTINRVQKARKSLKRSLGKHPDDVEVA 1344
Y+FSTYVQYWIRK+MS+LVA+H RG+++P LS IN++QKARK+ S K+PDD E+A
Sbjct: 367 YRFSTYVQYWIRKSMSRLVAQHARGVQIPFTLSKAINQIQKARKANYNSHMKYPDDEEIA 426
Query: 1345 KFTGLTLEKVKSADNCLRIVGSLDQKIGDFINMKYLECTPDTSIKIPEKVVTKQHMKNDI 1524
K TGL+L +++SA CLR+VGS+D K+ + + Y+E TPDTS+K PE+ V +QHMK DI
Sbjct: 427 KITGLSLARIRSASTCLRVVGSVDHKMWESSDGTYMEFTPDTSLKSPEETVMRQHMKKDI 486
Query: 1525 NKLLQHLDPKEKRVMILRYGLGGH-CMSLHEVGKIFDVSKEWIRKLEKRALTKLKSEENQ 1701
+ LL+ L+ +E++V++LRYGL + SL E+G++F VSKEWIRK+EK+AL KL+ EE+
Sbjct: 487 HDLLKGLNLRERQVLVLRYGLNNYDPKSLEEIGRLFHVSKEWIRKIEKKALMKLRVEESH 546
Query: 1702 RSLMHYLN 1725
+ L HYLN
Sbjct: 547 KYLSHYLN 554
>ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-like [Fragaria vesca
subsp. vesca]
Length = 545
Score = 485 bits (1249), Expect = e-134
Identities = 270/555 (48%), Positives = 368/555 (66%), Gaps = 22/555 (3%)
Frame = +1
Query: 130 MRWGFPSLRSPFTTNS-----STSFRGKESDFNSARLSLLTIGFDESEMLHKDTLRQHAC 294
++ GFP S + TNS S+S RG+E F+SA LS L++ +E E KD L+ + C
Sbjct: 9 LKCGFPIHNSHWQTNSPSKLPSSSVRGREGSFSSAGLSFLSVISEECETSSKDPLKVYTC 68
Query: 295 SSSASLTVDDDYSNLEVAISKK--SRKGLHNMINDTQVISDRDTSVYVRSIRACSASHFH 468
S++ +DD S +E ++ + S+ G NMI+D + S SH+
Sbjct: 69 PSASPQLLDDGLSEMEEKMNPRRMSKSGSANMIDDKEYS--------FMSSAGLRTSHYT 120
Query: 469 VLMENINVLENRVSDS--EKLETDILVQLGRLGALQLFHDCLSRTA------EMLASPPP 624
+L++N+NVLE +DS KLE +IL+QLGRLGAL+LF CLSRT ++ P
Sbjct: 121 LLLQNLNVLEETFADSGVSKLEKEILLQLGRLGALKLFEICLSRTLKTSSFLDLSDIPTE 180
Query: 625 PPQVTEDSRQNDQIDSDLKKIVVYSKRKEARKLRQE-----KRLQATCRSESSKRSSMHQ 789
P + + R+N +V S +KE +K R+ K+ T + +
Sbjct: 181 PIEKHKTERKN----------IVRSGKKEEQKSRKRTSYDSKKFSGTLPVKQMREGFKKP 230
Query: 790 MVSSSAKKTKARGRRAIIAKNEAEMSRGVKLAAQLEQVKATLEKETGRAVSLNCWAEAAG 969
SS + + +R RR ++AKNEAEMS GVK+ A LE++K TLEKETG+ +L CWAEAAG
Sbjct: 231 NPSSVRRASNSRSRRLMMAKNEAEMSVGVKVIADLERLKVTLEKETGKVPTLRCWAEAAG 290
Query: 970 IDVKALKHDLHFGWYCRDELIKSGRSLVLYLARYYRGQGVAYEDLIQAGNIGILQGAERF 1149
+D K L+ LHFGWYC+DEL++S RSLVLYLAR YRG GVA +DL+QAGN+G+LQGAERF
Sbjct: 291 VDEKVLQQQLHFGWYCQDELVRSTRSLVLYLARNYRGLGVALDDLLQAGNLGLLQGAERF 350
Query: 1150 DHTRGYQFSTYVQYWIRKAMSQLVARHGRGIKVPVALSTTINRVQKARKSLKRSLGKHPD 1329
D +RGY+FSTYVQYWIRK+MS+LVA+H RGIK+P LS INR+QKARK+ S K+PD
Sbjct: 351 DPSRGYRFSTYVQYWIRKSMSRLVAQHARGIKIPNTLSKAINRIQKARKANYNSHMKYPD 410
Query: 1330 DVEVAKFTGLTLEKVKSADNCLRIVGSLDQKIGDFINMKYLECTPDTSIKIPEKVVTKQH 1509
D E+AK TGL+L K+ SA CLR+VGS+D KI + Y+E TPD +++ PE+ V +QH
Sbjct: 411 DEEIAKITGLSLAKISSASRCLRVVGSVDHKIWECSAGTYMEFTPDIAVETPEESVMRQH 470
Query: 1510 MKNDINKLLQHLDPKEKRVMILRYGLGGHC--MSLHEVGKIFDVSKEWIRKLEKRALTKL 1683
MKNDI+ LL+ L+ +EK+V+ LRYGL +C SL E+G++F VSKEWIRK+EK ALTKL
Sbjct: 471 MKNDIHVLLEGLNSREKKVLALRYGL-NYCNPKSLEEIGRLFHVSKEWIRKIEKNALTKL 529
Query: 1684 KSEENQRSLMHYLNQ 1728
++EE+ ++L HYL Q
Sbjct: 530 RNEESNKNLSHYLKQ 544
>gb|EOY29838.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
Length = 848
Score = 482 bits (1240), Expect = e-133
Identities = 258/503 (51%), Positives = 357/503 (70%), Gaps = 17/503 (3%)
Frame = +1
Query: 268 KDTLRQHACSSSASLTVDD---DYSNLEVAISKKSRKGLHN--MINDTQVISDRDTSVYV 432
KD L+ +A SS+A T++ + ++V I K S+ H+ MI+ T + D S
Sbjct: 346 KDPLKAYA-SSAAPQTLEKGCLEIEEMKVNIGKGSQAHSHSLTMIDKTHELIGGDKSSSR 404
Query: 433 RSIRACSASHFHVLMENINVLENRVSDSE--KLETDILVQLGRLGALQLFHDCLSRT--A 600
S +AC ASH+ +LMEN++VLE +DS+ LE +IL+QLGR GAL+LF+ CLSRT A
Sbjct: 405 TSPQACKASHYSLLMENLDVLEETFADSDVLTLEREILLQLGRFGALKLFNTCLSRTLKA 464
Query: 601 EMLASPPPPPQVTEDSRQNDQIDSDLKKIVVYSKRKEARKLRQEKRLQ--ATCRSESSKR 774
+ P + D N +D IVV S++K+ RK +E+ L+ ++
Sbjct: 465 SNILDLSDVPANSGDCNMNLSVDGQKDNIVVCSRKKKQRKKIRERALENPTIISTQLMPS 524
Query: 775 SSMH-----QMVSSSAKKTKARGRRAIIAKNEAEMSRGVKLAAQLEQVKATLEKETGRAV 939
+++H VSS+ + + +R RR IA+NEAEMS+GVK+ A LE+++ TLE+ETGRA
Sbjct: 525 NTLHGRFQKPKVSSAKRVSDSRSRRLRIARNEAEMSKGVKVVANLERIRTTLEEETGRAA 584
Query: 940 SLNCWAEAAGIDVKALKHDLHFGWYCRDELIKSGRSLVLYLARYYRGQGVAYEDLIQAGN 1119
SL+CWAEAAG+ K L+ L FGWYCRDEL++S RSLVLY AR YRG G+A+EDLIQAG+
Sbjct: 585 SLSCWAEAAGVSEKVLQQHLRFGWYCRDELLRSTRSLVLYFARNYRGLGIAHEDLIQAGS 644
Query: 1120 IGILQGAERFDHTRGYQFSTYVQYWIRKAMSQLVARHGRGIKVPVALSTTINRVQKARKS 1299
+G+LQGAERFDHTRGY+FSTYVQ+WIRK++S++VARH RGI+VP LS I ++QKARK+
Sbjct: 645 LGVLQGAERFDHTRGYRFSTYVQFWIRKSVSRIVARHARGIQVPCTLSRAIVQIQKARKA 704
Query: 1300 LKRSLGKHPDDVEVAKFTGLTLEKVKSADNCLRIVGSLDQKIGDFINMKYLECTPDTSIK 1479
L +S GK+PD+ +AKFTGL+L K++SA+ C+R+VGS+DQKIGD +N KYLE PD S++
Sbjct: 705 LSKSHGKYPDEDAIAKFTGLSLAKIRSANKCMRVVGSIDQKIGDCMNAKYLEFIPDLSVR 764
Query: 1480 IPEKVVTKQHMKNDINKLLQHLDPKEKRVMILRYGL-GGHCMSLHEVGKIFDVSKEWIRK 1656
PEK V +QHMK DI+ LL LD +E++VM+LRYGL G SL E+G++F VSKEWIR+
Sbjct: 765 SPEKTVMRQHMKEDIHDLLNGLDARERQVMVLRYGLKGSPPKSLEEIGRLFHVSKEWIRR 824
Query: 1657 LEKRALTKLKSEENQRSLMHYLN 1725
+E +A+ KL+ +E R+L HYL+
Sbjct: 825 IEMKAMKKLRDKETCRNLSHYLD 847
>ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Populus trichocarpa]
gi|222854562|gb|EEE92109.1| hypothetical protein
POPTR_0006s25090g [Populus trichocarpa]
Length = 559
Score = 476 bits (1225), Expect = e-131
Identities = 261/549 (47%), Positives = 370/549 (67%), Gaps = 19/549 (3%)
Frame = +1
Query: 133 RWGFPSLRSPFTTNSSTSF-----RGKESDFNSARLSLLTIGFDESEMLHKDTLRQHACS 297
+WG P ++S TNS++ F RG E+ N ARLS L++ +E ++L+K + + ACS
Sbjct: 10 KWGSP-MQSHSATNSTSMFSSFSARGMEASVNQARLSFLSVVSEEGDILNKHSFKSFACS 68
Query: 298 SSASLTVDD--DYSNLEVAISKKSRKGLHNMINDTQVISDRDTSVYVRSIRACSASHFHV 471
S+A +D L++ + K S ++NM+ + +V + + S +R S
Sbjct: 69 SAAQNVENDCLQMERLKMNVDKTSHVSINNMMGNDKVSVEEEISTSHTRLRERMTSRISF 128
Query: 472 LMENINVLENRVSDSE--KLETDILVQLGRLGALQLFHDCLSRTAE---MLASPPPPPQV 636
L++N++ LE V+D + KLE DIL+QLGRLGAL+ F+ CLSRT + +L P +
Sbjct: 129 LLDNLDTLEKLVADLDALKLERDILLQLGRLGALEFFNACLSRTLQTSNVLDLSAVPTEN 188
Query: 637 TEDSRQNDQIDSDLKKIVVYSKRKEARKLRQEKRL-----QATCRSESSKRSSMHQMVSS 801
T +S+ + + K VV + +KE RK R+E+ + T S SK + +
Sbjct: 189 TGESKTDGMLGDLTGKTVVRTGKKEERKFRRERAASDNGKKTTSLSLPSKTVQNNLPKPT 248
Query: 802 SAKKTKARG-RRAIIAKNEAEMSRGVKLAAQLEQVKATLEKETGRAVSLNCWAEAAGIDV 978
K+T + RR++IA+NEA+M+RGVK+A+ LE+++ TLE+ETG+ VSL+CWAEA G+D
Sbjct: 249 FVKRTSSSSSRRSLIARNEAKMTRGVKVASDLERIRTTLEEETGQVVSLSCWAEATGLDK 308
Query: 979 KALKHDLHFGWYCRDELIKSGRSLVLYLARYYRGQGVAYEDLIQAGNIGILQGAERFDHT 1158
K L+ L FGWYCRDELIK+ SLVLY+AR YRG G+A EDLIQAGN+G+LQGAERFD T
Sbjct: 309 KVLQQQLQFGWYCRDELIKNTHSLVLYIARNYRGMGIAMEDLIQAGNLGLLQGAERFDPT 368
Query: 1159 RGYQFSTYVQYWIRKAMSQLVARHGRGIKVPVALSTTINRVQKARKSLKRSLGKHPDDVE 1338
RGY+FSTYVQYWIRK+M ++V RH RGI++P ALS +IN++QKARK+L S G++PDD E
Sbjct: 369 RGYRFSTYVQYWIRKSMLKIVERHARGIQIPYALSRSINKIQKARKALSNSHGRYPDDWE 428
Query: 1339 VAKFTGLTLEKVKSADNCLRIVGSLDQKIGDFINMKYLECTPDTSIKIPEKVVTKQHMKN 1518
VAKFTGL+L K++SA CLR+V SLDQKIG+ KY E PD SI+ PE+ V +QHM+
Sbjct: 429 VAKFTGLSLAKIESAQKCLRVVASLDQKIGEGHYAKYSEFIPDMSIQNPEEAVMRQHMRE 488
Query: 1519 DINKLLQHLDPKEKRVMILRYGL-GGHCMSLHEVGKIFDVSKEWIRKLEKRALTKLKSEE 1695
+I LL+ LD +EK+VM+LRYG SL E+G++F VSKE +RK+EK+ + KL+ E
Sbjct: 489 EIYDLLRGLDSREKQVMVLRYGFKDNQPKSLAEIGRLFRVSKERVRKIEKKIMIKLRDEG 548
Query: 1696 NQRSLMHYL 1722
+R+L Y+
Sbjct: 549 IRRNLSRYM 557
>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum tuberosum]
Length = 555
Score = 469 bits (1206), Expect = e-129
Identities = 258/553 (46%), Positives = 369/553 (66%), Gaps = 23/553 (4%)
Frame = +1
Query: 130 MRWGFPSLRSPFTTNSST-----SFRGKESDFNSARLSLLTIGFDESEMLHKDTLRQHAC 294
++WGF S++ PF++NSS+ SF+G+E+ ++ AR SL + E H D R C
Sbjct: 7 LKWGF-SVQPPFSSNSSSWPSSHSFKGREALYDPAR-SLKPFITGDCEPSHSDPFRVQTC 64
Query: 295 SSSASLTVDDDYSNLEVAISKKSRKGLHNMINDTQ-----VISDRDTSVYVRSIRACSAS 459
S L D E+ ++ R N+ D + D + Y+ + ++
Sbjct: 65 LSDPQLWTSDTSVTTEIK-TRNGRGSPSNVYGDIGSHKIGISPDGEKPTYLNTTKSL--- 120
Query: 460 HFHVLMENINVLENRVSDSE--KLETDILVQLGRLGALQLFHDCLSRTAEMLASPPP--- 624
HF +LM+N+++LEN +DSE +LE DILVQL +LGAL+ FH CLSRT P
Sbjct: 121 HFSLLMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRTHHSSTFPKVLDV 180
Query: 625 PPQVTEDSRQNDQIDSDLKKIVVYSKRKEARKLRQEKRLQ-----ATCRSESSK-RSSMH 786
P ++ ++ ++D + + + K+VV S++K+ RK R+ + + T + + + +
Sbjct: 181 PRELIKEVEKDDLVGNAIDKVVVRSRKKQERKSRRNRASRNANDIITVQPHTKNIQEDLQ 240
Query: 787 QMVSSSAKKTKA-RGRRAIIAKNEAEMSRGVKLAAQLEQVKATLEKETGRAVSLNCWAEA 963
Q S K+T+A R +R IAKNEAEMSRGVKL AQLE++++ LE+ETGR + + WAEA
Sbjct: 241 QPKFYSGKRTQASRNKRQKIAKNEAEMSRGVKLVAQLERIRSILEEETGRVATFSSWAEA 300
Query: 964 AGIDVKALKHDLHFGWYCRDELIKSGRSLVLYLARYYRGQGVAYEDLIQAGNIGILQGAE 1143
AGI+ K L+ LHFGWYCRDEL+KS RSLVLYLAR YRG GVA+EDLIQAGN+G+LQGA
Sbjct: 301 AGIEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAV 360
Query: 1144 RFDHTRGYQFSTYVQYWIRKAMSQLVARHGRGIKVPVALSTTINRVQKARKSLKRSLGKH 1323
RFDHTRGY+FSTYVQYWIRK++S+LVA+H RG+++P + IN++ KARK+L RS GK
Sbjct: 361 RFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIHKARKTLSRSHGKF 420
Query: 1324 PDDVEVAKFTGLTLEKVKSADNCLRIVGSLDQKIGDFINMKYLECTPDTSIKIPEKVVTK 1503
P D E+AKFTGL+ ++ A CLR+VGS+DQK+GD I+ K LE TPD SI PE+ V +
Sbjct: 421 PADDEIAKFTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVLELTPDKSITSPEETVMR 480
Query: 1504 QHMKNDINKLLQHLDPKEKRVMILRYGLGGH-CMSLHEVGKIFDVSKEWIRKLEKRALTK 1680
Q + +++ LL+ LDPKE++V+ R+GL H SL E+G+++ VSKEWIR++E+RALTK
Sbjct: 481 QDIVDNMYSLLESLDPKEQQVIYFRFGLETHQRKSLEEIGRLYGVSKEWIRRIERRALTK 540
Query: 1681 LKSEENQRSLMHY 1719
L++ + + + HY
Sbjct: 541 LRNADYFQHITHY 553
>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
lycopersicum]
Length = 551
Score = 465 bits (1196), Expect = e-128
Identities = 256/549 (46%), Positives = 368/549 (67%), Gaps = 19/549 (3%)
Frame = +1
Query: 130 MRWGFPSLRSPFTTNSST-----SFRGKESDFNSARLSLLTIGFDESEMLHKDTLRQHAC 294
++WGF SL+ PF++NSS+ SF+G+E+ ++ AR SL + E H D R C
Sbjct: 7 LKWGF-SLQPPFSSNSSSWPSSHSFKGRETLYDPAR-SLKPFINGDCEPSHSDPFRVQTC 64
Query: 295 SSSASLTVDDDYSNLEVAISKKSRKGLHNMINDTQVIS-DRDTSVYVRSIRACSASHFHV 471
S L D E ++ R N+ D D + Y+ + ++ HF +
Sbjct: 65 LSDPQLWTSDASVTTETK-TRNGRGSPSNVYGDIGSYKIDGEKPTYLNTTKSL---HFSL 120
Query: 472 LMENINVLENRVSDSE--KLETDILVQLGRLGALQLFHDCLSRTAEMLASPPP---PPQV 636
LM+N+++LEN +DSE +LE DILVQL +LGAL+ FH CLSRT + P P ++
Sbjct: 121 LMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRTHHSSSFPKVLDVPREL 180
Query: 637 TEDSRQNDQIDSDLKKIVVYSKRKEARKLRQEKRLQ-----ATCRSESSK-RSSMHQMVS 798
++ ++D + + + K+VV S++K+ R R+++ + T + + + + Q+
Sbjct: 181 IKEVEKDDLVGNAMDKVVVRSRKKQERMSRRKRASRNANDIITVQPHTKNIQEDLQQLKF 240
Query: 799 SSAKKTKA-RGRRAIIAKNEAEMSRGVKLAAQLEQVKATLEKETGRAVSLNCWAEAAGID 975
S K+T A R +R IAKNEAEMS+GVKL AQLE++++ LE+ETG+ + + WA+AAGI+
Sbjct: 241 YSGKRTHASRTKRQKIAKNEAEMSKGVKLVAQLERIRSILEEETGQVATFSSWAKAAGIE 300
Query: 976 VKALKHDLHFGWYCRDELIKSGRSLVLYLARYYRGQGVAYEDLIQAGNIGILQGAERFDH 1155
K L+ LHFGWYCRDEL+KS RSLVLYLAR YRG GVA+EDLIQAGN+G+LQGA RFDH
Sbjct: 301 QKELQQHLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDH 360
Query: 1156 TRGYQFSTYVQYWIRKAMSQLVARHGRGIKVPVALSTTINRVQKARKSLKRSLGKHPDDV 1335
TRGY+FSTYVQYWIRK++S+LVA+H RG+++P + IN++ KARK+L RS GK P D
Sbjct: 361 TRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIHKARKTLSRSHGKFPADD 420
Query: 1336 EVAKFTGLTLEKVKSADNCLRIVGSLDQKIGDFINMKYLECTPDTSIKIPEKVVTKQHMK 1515
E+AKFTGL+ ++ A CLR+VGS+DQK+GD IN K LE TPD S+ PE+ V +Q +
Sbjct: 421 EIAKFTGLSTARIAMASKCLRVVGSIDQKVGDCINAKVLELTPDKSVTSPEEFVMRQDIV 480
Query: 1516 NDINKLLQHLDPKEKRVMILRYGLGGH-CMSLHEVGKIFDVSKEWIRKLEKRALTKLKSE 1692
+++ LL+ LDPKE++V+ R+GL H SL E+G+++ VSKEWIR++E+RALTKL+S
Sbjct: 481 DNMYALLESLDPKEQQVIYFRFGLETHQRKSLEEIGRLYGVSKEWIRRIERRALTKLRSA 540
Query: 1693 ENQRSLMHY 1719
+ + + HY
Sbjct: 541 DYFQHITHY 549
>ref|XP_003551127.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Glycine max]
Length = 551
Score = 441 bits (1135), Expect = e-121
Identities = 243/529 (45%), Positives = 355/529 (67%), Gaps = 12/529 (2%)
Frame = +1
Query: 175 SSTSFRGKESDFNSARLSLLTIGFDESEMLHKDTLRQHACSSSASLTVDDDYSNLE---V 345
S +S +E+ FN RLS + ++E E L KD R A SSSA T+++D E V
Sbjct: 33 SPSSAGVRETCFNFTRLSFPSTFYEEGEALQKDFGRVFAFSSSALETLENDSLGREETQV 92
Query: 346 AISKKSRKGLHNMINDTQVISDRDTSVYVRSIRACSASHFHVLMENINVLENRVSDSE-- 519
K+S +H MI++TQ+ + S + + A HF +LMEN+ VLE DSE
Sbjct: 93 NKGKRSLSSVHKMIDNTQMPFG-EVSTVSKKFESFRAQHFRLLMENLCVLEETFVDSEAL 151
Query: 520 KLETDILVQLGRLGALQLFHDCLSRTAEMLASPPPPPQVTEDSRQNDQIDSDLKKIVVYS 699
+LE I++QLG+LGAL+LF+ CLSR+ + S D++D K+VV S
Sbjct: 152 RLEKAIILQLGKLGALELFNVCLSRSLG----------TSLVSNYADKVDDYKDKVVVQS 201
Query: 700 KRKEARKLRQEKRLQATCRSESSK--RSSMHQMVSSSAKKTK----ARGRRAIIAKNEAE 861
+K+ K R+++ +T S S +++ ++ SA K + +R ++AK EAE
Sbjct: 202 SKKKENKTRRKREFVSTAVSSQSLTLKANQEDLLGFSASLVKRAPNTKNKRILVAKREAE 261
Query: 862 MSRGVKLAAQLEQVKATLEKETGRAVSLNCWAEAAGIDVKALKHDLHFGWYCRDELIKSG 1041
MS+GVK+ A+LE+++ +E++T R SL+ WAEA+G+D K L+ LH G+YC+DELI+S
Sbjct: 262 MSKGVKVLAELEKIRTAIEEDTKRVASLSTWAEASGVDEKVLQKLLHRGYYCQDELIRST 321
Query: 1042 RSLVLYLARYYRGQGVAYEDLIQAGNIGILQGAERFDHTRGYQFSTYVQYWIRKAMSQLV 1221
RSLVLYLAR YRG G+A +DL+QAG +G+LQGAERFD TRGY+FSTYVQYWIRK++ ++V
Sbjct: 322 RSLVLYLARKYRGMGIALDDLLQAGYVGVLQGAERFDSTRGYKFSTYVQYWIRKSILRVV 381
Query: 1222 ARHGRGIKVPVALSTTINRVQKARKSLKRSLGKHPDDVEVAKFTGLTLEKVKSADNCLRI 1401
AR+ RGI +P +L+ IN++QKARK++K + K PDD E+AK TGL+L+K+KSA NCLRI
Sbjct: 382 ARYARGIVIPWSLNRAINQIQKARKAMKSTHKKCPDDYEIAKMTGLSLDKIKSASNCLRI 441
Query: 1402 VGSLDQKIGDFINMKYLECTPDTSIKIPEKVVTKQHMKNDINKLLQHLDPKEKRVMILRY 1581
V S+DQK+GD++ ++Y+E PD +I+ PE V KQHM+ D++ LL+ L+ +E++++ LR+
Sbjct: 442 VASIDQKVGDYLGVEYMELLPDATIESPEDAVMKQHMRKDVHDLLKGLNLRERKILTLRF 501
Query: 1582 GLG-GHCMSLHEVGKIFDVSKEWIRKLEKRALTKLKSEENQRSLMHYLN 1725
GL SL ++G +F VSKE IRK+EK+ALTKLK+E L +YL+
Sbjct: 502 GLNDNQPRSLQDIGTLFKVSKERIRKIEKKALTKLKNEATISKLHYYLD 550
>ref|XP_004498453.1| PREDICTED: RNA polymerase sigma factor sigC-like [Cicer arietinum]
Length = 545
Score = 436 bits (1120), Expect = e-119
Identities = 244/533 (45%), Positives = 356/533 (66%), Gaps = 15/533 (2%)
Frame = +1
Query: 172 NSSTSFRGKESDFNSARLSLLTIGFDESEMLHKDTLRQHACSSSASLTVDDDYSNLEVAI 351
+SS+S G+E FN RLSLL+ ++E E L KD + A SSSA + D EV
Sbjct: 27 SSSSSAGGREVFFNPTRLSLLSTVYEEGETLQKDFGKTFAFSSSALEVPEMDLLQGEVTK 86
Query: 352 SKKSRKGL---HNMINDTQVISDRDTSVYVRSIRACSASHFHVLMENINVLENRVSDSE- 519
K ++ L H +I++TQ+ HF +LMEN+ +LE +DSE
Sbjct: 87 VNKGKRSLSSVHEIIDNTQL--------------PFGEPHFGLLMENLGILEETFADSEA 132
Query: 520 -KLETDILVQLGRLGALQLFHDCLSRTAEMLASPPPPPQVTE---DSRQNDQIDSDLKKI 687
+LE DI+++L +LGAL+LF+ CL+R+ V E + ++N ++D+ K+
Sbjct: 133 MRLEKDIVLKLEKLGALELFNVCLTRSFGTSTESNCTDVVLEHVKEKKRNFKVDNYTGKV 192
Query: 688 VVYSKRKEARKLRQEKRLQATCRSESSKRSSMHQ-----MVSSSAKK-TKARGRRAIIAK 849
VV SKRKE R R++ + T +S +Q + +S K+ + RRA+IA+
Sbjct: 193 VVQSKRKENRTRRKQASVAITTSFQSLPLEDNNQEGPLRLPASLVKRVSNTNNRRAVIAQ 252
Query: 850 NEAEMSRGVKLAAQLEQVKATLEKETGRAVSLNCWAEAAGIDVKALKHDLHFGWYCRDEL 1029
E EMS+GVK+ A+LE++K +E++T +AVSL+ WAEA+G+D L+ L+ G+YCRDEL
Sbjct: 253 REVEMSKGVKVLAELEKMKTAIEEDTKQAVSLSSWAEASGVDENVLQRQLYHGYYCRDEL 312
Query: 1030 IKSGRSLVLYLARYYRGQGVAYEDLIQAGNIGILQGAERFDHTRGYQFSTYVQYWIRKAM 1209
I+S RSLVLY AR YRG G+A EDL+Q G IG+LQGAERFD TRGY+FSTYVQYWIRK+M
Sbjct: 313 IRSTRSLVLYFARKYRGMGIALEDLLQVGYIGVLQGAERFDSTRGYRFSTYVQYWIRKSM 372
Query: 1210 SQLVARHGRGIKVPVALSTTINRVQKARKSLKRSLGKHPDDVEVAKFTGLTLEKVKSADN 1389
S++VAR+ RGI +P +++ I+++QKARK LK + K+PDD E+AK TGL+L++++SA +
Sbjct: 373 SRMVARYARGITIPWSMNKAISQIQKARKLLKSTSMKYPDDHEIAKMTGLSLDRIRSASH 432
Query: 1390 CLRIVGSLDQKIGDFINMKYLECTPDTSIKIPEKVVTKQHMKNDINKLLQHLDPKEKRVM 1569
C+RIV S++QK+GD ++Y+ D SI+ PE+ V KQH++ DI+ +LQ LD +E++++
Sbjct: 433 CMRIVSSMNQKMGD-RGIEYMGYMADMSIESPEETVMKQHIRKDIHDILQSLDSRERQIL 491
Query: 1570 ILRYGLGGH-CMSLHEVGKIFDVSKEWIRKLEKRALTKLKSEENQRSLMHYLN 1725
ILR+GL H SL +GKI+ VSKEWIRK+EK+ALTKL++E N L +YL+
Sbjct: 492 ILRFGLNDHQPKSLEYIGKIYKVSKEWIRKIEKKALTKLRNEANTSKLNYYLD 544
>ref|XP_004148429.1| PREDICTED: RNA polymerase sigma factor sigC-like [Cucumis sativus]
gi|449507267|ref|XP_004162982.1| PREDICTED: RNA
polymerase sigma factor sigC-like [Cucumis sativus]
Length = 559
Score = 430 bits (1106), Expect = e-117
Identities = 241/552 (43%), Positives = 350/552 (63%), Gaps = 20/552 (3%)
Frame = +1
Query: 130 MRWGFP----SLRSPFTTNSSTSFRGKESDFNSARLSLLTIGFDESEMLHKDTLRQHACS 297
+RWGF SL++ + S + +G+E+ FNS RLS + +E E + ++TL+ + C
Sbjct: 9 LRWGFQIQTHSLKNSPSKLSPHASKGREAAFNSGRLSFFSSICEEGESIPRETLKTYTCL 68
Query: 298 SSASLTVDDDYSNLEVAISKKSRKGL---HNMINDTQVISDRDTSVYVRSIRACSASHFH 468
S A T +D NLE K L H I T+ D S+ AS F
Sbjct: 69 SEAPQTSANDLLNLEEIEMNSGAKSLGPMHYGIKSTRPSKVEDNFSSCTSLPTGKASPFG 128
Query: 469 VLMENINVLENRVSDSE--KLETDILVQLGRLGALQLFHDCLSRTAEMLA---SPPPPPQ 633
+LMEN++VLE ++S LE DI++QL +LGAL+ F+ CLSRT + + S P +
Sbjct: 129 ILMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDSSGLPIE 188
Query: 634 VTEDSRQNDQIDSDLKKIVVYSKRKEARKLRQEKRLQATCRSESS-------KRSSMHQM 792
ED N + + + VYS +K R+ +++ + + S K
Sbjct: 189 GGEDHNVNQKTNDQNDNVTVYSAKKAGRRSVKKRAMDNADKIASRLLTTRAVKEKIHRST 248
Query: 793 VSSSAKKTKARGRRAIIAKNEAEMSRGVKLAAQLEQVKATLEKETGRAVSLNCWAEAAGI 972
V S K + + RR I+A NEAEMS GVK+ A LE+++ TLEKE+GR S++CWAEAA +
Sbjct: 249 VFSRKKSSNSSKRRLIVAINEAEMSTGVKVVANLERIRETLEKESGRIASMSCWAEAASV 308
Query: 973 DVKALKHDLHFGWYCRDELIKSGRSLVLYLARYYRGQGVAYEDLIQAGNIGILQGAERFD 1152
D+K L+ L FG +CRDEL++S SLV++LA+ YR G+ EDL+QAG +G+LQG ERFD
Sbjct: 309 DIKDLQKQLQFGSFCRDELLRSTNSLVVFLAKKYRCSGLPMEDLVQAGALGVLQGVERFD 368
Query: 1153 HTRGYQFSTYVQYWIRKAMSQLVARHGRGIKVPVALSTTINRVQKARKSLKRSLGKHPDD 1332
RG++ STY+QYWIRK+MS++VAR+ RGI++P +L+ IN++QKARK L S ++ DD
Sbjct: 369 PKRGFRISTYIQYWIRKSMSRVVARNSRGIQIPRSLTKAINQIQKARKVLNHSGRRYSDD 428
Query: 1333 VEVAKFTGLTLEKVKSADNCLRIVGSLDQKIGDFINMKYLECTPDTSIKIPEKVVTKQHM 1512
++A+ TGL L KV+ A NCL++VGS DQK+GD +NMKY+E T D SI+ PE+ V ++ M
Sbjct: 429 -DIARATGLPLAKVRVASNCLKVVGSNDQKMGDGVNMKYMEFTADMSIQSPEETVKRKLM 487
Query: 1513 KNDINKLLQHLDPKEKRVMILRYGL-GGHCMSLHEVGKIFDVSKEWIRKLEKRALTKLKS 1689
K DI +LQ L+ +E++V++LRYGL SL E+GK+ +SKEW+RK+EK+A+TKLK+
Sbjct: 488 KKDIFNILQRLESRERQVLVLRYGLVDFEPKSLEEIGKLLHISKEWVRKIEKKAMTKLKN 547
Query: 1690 EENQRSLMHYLN 1725
EE + L HYL+
Sbjct: 548 EETVKHLSHYLD 559
>ref|XP_003588449.1| RNA polymerase sigma-B factor [Medicago truncatula]
gi|355477497|gb|AES58700.1| RNA polymerase sigma-B factor
[Medicago truncatula]
Length = 549
Score = 417 bits (1071), Expect = e-113
Identities = 242/564 (42%), Positives = 360/564 (63%), Gaps = 27/564 (4%)
Frame = +1
Query: 115 KLNIMMRWGFPSLR--SPFTTNS------STSFRGKESDFNSARLSLLTIGFDESEMLHK 270
+LN +R+ L SPF +NS S+S G+E+ FN RLSLL+ ++E E L K
Sbjct: 8 RLNTKLRYSTVPLHHSSPFFSNSHIFLSSSSSAGGRETLFNPVRLSLLSTVYEEGETLQK 67
Query: 271 DTLRQHACSSSASLTVDDDYSNLEVAISKKSRKGL---HNMINDTQVISDRDTSVYVRSI 441
D + A SS+ D E+ K ++ L H MI+++ + +
Sbjct: 68 DFRKTFAFSSALEAPEKDLLQGGELTKVNKGKRSLSSVHEMIDNSHLPFEE--------- 118
Query: 442 RACSASHFHVLMENINVLENRVSDSE--KLETDILVQLGRLGALQLFHDCLSR---TAEM 606
SHF +LMEN+ VLE +DSE +LE +I++QL +LGAL+LF+ CL+ T+ +
Sbjct: 119 -----SHFGLLMENLGVLEETFADSEALRLEKNIILQLEKLGALELFNVCLTTSFGTSCI 173
Query: 607 LASPPPPPQVTEDSRQNDQIDSDLKKIVVYS-KRKEARKLRQ--------EKRLQATCRS 759
+ E++++N ++D K++V+S KRKE R+ ++ + L
Sbjct: 174 SNCTHKVLEQVEENKRNHKVDDYTGKVIVHSSKRKENRRRKRGSVSIAPSSRSLPLDDNQ 233
Query: 760 ESSKRSSMHQMVSSSAKKTKARGRRAIIAKNEAEMSRGVKLAAQLEQVKATLEKETGRAV 939
E RSS V + + + +RA+IA+ E EMS+GVK+ A+LE+++ +E++T + V
Sbjct: 234 EDPLRSSPASFVK---RASNTKNKRAVIAQREVEMSKGVKVLAELEKIRTAIEEDTKQVV 290
Query: 940 SLNCWAEAAGIDVKALKHDLHFGWYCRDELIKSGRSLVLYLARYYRGQGVAYEDLIQAGN 1119
SL+ WAE +G+D K L+ L+ G+YCRDELI+S RSLVLY AR YRG G+A EDL+Q G
Sbjct: 291 SLSSWAETSGVDEKVLQQQLYHGYYCRDELIRSTRSLVLYFARKYRGMGIALEDLLQVGY 350
Query: 1120 IGILQGAERFDHTRGYQFSTYVQYWIRKAMSQLVARHGRGIKVPVALSTTINRVQKARKS 1299
IG+LQGAERFD T+GY+FSTYVQYWIRK+MS++VA++ RGI VP +++ I+++QKARK
Sbjct: 351 IGVLQGAERFDSTKGYRFSTYVQYWIRKSMSRMVAKYARGITVPWSMNKAISQIQKARKV 410
Query: 1300 LKRSLGKHPDDVEVAKFTGLTLEKVKSADNCLRIVGSLDQKIGDFINMKYLECTPDTSIK 1479
LK + K+P+D+E+AK TGL+L+K+ SA +CLR V S+ + ++Y+ PD SI+
Sbjct: 411 LKNTTMKYPNDLEIAKMTGLSLDKIMSASHCLRTVSSM------YRGIEYMGHMPDLSIE 464
Query: 1480 IPEKVVTKQHMKNDINKLLQHLDPKEKRVMILRYGLGG--HCMSLHEVGKIFDVSKEWIR 1653
PE+ V KQH+K DI+ +LQ LD +E++++ILR+GL SL +GKIF VSKEWIR
Sbjct: 465 SPEETVMKQHIKKDIHDILQSLDSRERQIIILRFGLNDDHQPKSLEYIGKIFKVSKEWIR 524
Query: 1654 KLEKRALTKLKSEENQRSLMHYLN 1725
K+EK+ALTKL++E N L +YL+
Sbjct: 525 KIEKKALTKLRNETNISKLNYYLD 548
>gb|ESW33313.1| hypothetical protein PHAVU_001G059800g [Phaseolus vulgaris]
Length = 538
Score = 416 bits (1068), Expect = e-113
Identities = 235/528 (44%), Positives = 348/528 (65%), Gaps = 11/528 (2%)
Frame = +1
Query: 175 SSTSFRGKESDFNSARLSLLTIGFDESEMLHKDTLRQHACSSSASLTVDDDYSNLEVAIS 354
S +S KE+ FN +LSL T ++E E L KD R +A S+ +L ++ E ++
Sbjct: 30 SPSSAGVKETCFNCTKLSLPTTSYEEGEALQKDFGRVYAFSALDTLE-NESLGREETGVN 88
Query: 355 K--KSRKGLHNMINDTQVISDRDTSVYVRSIRACSASHFHVLMENINVLENRVSDSE--K 522
K +S G+H M +DTQ+ +SV + + + HF +LM+N++VLE +DSE +
Sbjct: 89 KGKRSLSGVHEMFDDTQMPFGEVSSVS-KKFESFTPQHFRLLMKNLDVLEEAFADSEALR 147
Query: 523 LETDILVQLGRLGALQLFHDCLSRTAEMLASPPPPPQVTEDSRQNDQIDSDLKKIVVYSK 702
LE I +QL +LGAL++F+ LS + D++ + K +V SK
Sbjct: 148 LEKAIRLQLEKLGALEIFNVYLSLVTDYA----------------DKVHNKGKCVVPSSK 191
Query: 703 RKEARKLRQEKRLQATCRSESSKRSSMHQ------MVSSSAKKTKARGRRAIIAKNEAEM 864
+K+ K R+++ + T S S ++Q VS + T ++ +R ++AK EAEM
Sbjct: 192 KKQ-NKTRRKREIGVTAVSSQSLTLKVNQEDLLGFSVSVVKRATNSKNKRMMVAKREAEM 250
Query: 865 SRGVKLAAQLEQVKATLEKETGRAVSLNCWAEAAGIDVKALKHDLHFGWYCRDELIKSGR 1044
++GVK+ A+LE+++ LE++T R V LN WAEA+G+D K L+ LH G+YCRDEL++S R
Sbjct: 251 AKGVKVLAELEKIRTALEEDTKRVVCLNHWAEASGVDEKVLQQLLHHGYYCRDELVRSSR 310
Query: 1045 SLVLYLARYYRGQGVAYEDLIQAGNIGILQGAERFDHTRGYQFSTYVQYWIRKAMSQLVA 1224
SLVLYLAR YRG G+A +DL+QAG +G+LQGAERFD TRGY+FSTYVQYWIRK++ ++V
Sbjct: 311 SLVLYLARKYRGMGIALDDLLQAGYVGVLQGAERFDSTRGYKFSTYVQYWIRKSILRVVE 370
Query: 1225 RHGRGIKVPVALSTTINRVQKARKSLKRSLGKHPDDVEVAKFTGLTLEKVKSADNCLRIV 1404
R+ RG+ +P +L+ I ++QKARK LK + K PDD E+AK TGL+L+K+KSA NCLRIV
Sbjct: 371 RYSRGVIIPWSLNRAIKQIQKARKVLKSTHKKSPDDCEIAKMTGLSLDKIKSASNCLRIV 430
Query: 1405 GSLDQKIGDFINMKYLECTPDTSIKIPEKVVTKQHMKNDINKLLQHLDPKEKRVMILRYG 1584
S+DQK+G+F +++Y E PDT+I+ PE V KQHMK D++ LL+ L+ +E++++ LR+G
Sbjct: 431 ASIDQKVGNF-SIEYNELLPDTTIESPENGVLKQHMKKDVHDLLKGLNSRERQILSLRFG 489
Query: 1585 L-GGHCMSLHEVGKIFDVSKEWIRKLEKRALTKLKSEENQRSLMHYLN 1725
L SL ++G +F VSKE IRK+EK ALTKL++E L +YL+
Sbjct: 490 LIDNQPKSLQDIGTLFKVSKERIRKIEKIALTKLRNEATTSDLHYYLD 537
>ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297323785|gb|EFH54206.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 568
Score = 412 bits (1058), Expect = e-112
Identities = 228/523 (43%), Positives = 341/523 (65%), Gaps = 14/523 (2%)
Frame = +1
Query: 202 SDFNSARLSLLTIGFDESEMLHKDTLRQHACSSSASLTVDDDYSNLEVAISKKSRKGLHN 381
S F + R S L+ +ES + KD L+ AC+SSA T ++ + L+ K G+ +
Sbjct: 78 SSFVATRWSFLSSVKEESRIYQKDPLK--ACASSAPYTAENVFLELK---DPKENIGVGS 132
Query: 382 MINDTQVISDRDTSVYVRSIRACSASHFHVLMENINVLENR--VSDSEKLETDILVQLGR 555
+S + S +++L +N+ LE DS ++E DI++Q+G+
Sbjct: 133 A---------------EKSCSSRSMLQYNLLAKNLLALEETFVALDSARMERDIMLQMGK 177
Query: 556 LGALQLFHDCLSRT-AEMLASPPPPPQVTEDSRQNDQIDSDLKKIVVYSKRKEARKLRQE 732
LGA LF CLSR+ +AS + N Q+ V S+RK +K R+
Sbjct: 178 LGAADLFKTCLSRSRGSSVASCLSDTTELVGTTPNQQV-------FVSSRRKLKKKARR- 229
Query: 733 KRLQATCRSESSKRSSMHQMVSSS---------AKKTKARGRRAIIAKNEAEMSRGVKLA 885
+T +E+ + S+ + ++ + K R +R I+KNEAEMS GVK+
Sbjct: 230 ----STVTAENGDQGSLPMGLRTTWNNIDVPRVRRPPKYRKKRERISKNEAEMSTGVKIV 285
Query: 886 AQLEQVKATLEKETGRAVSLNCWAEAAGIDVKALKHDLHFGWYCRDELIKSGRSLVLYLA 1065
A +E+++ LE+E+G+ SL+CWAEAAG++ K L +LH+GWYCRDEL+KS RSLVL+LA
Sbjct: 286 ADMERIRTQLEEESGKVASLSCWAEAAGMNEKLLMRNLHYGWYCRDELLKSTRSLVLFLA 345
Query: 1066 RYYRGQGVAYEDLIQAGNIGILQGAERFDHTRGYQFSTYVQYWIRKAMSQLVARHGRGIK 1245
R YRG G+A+EDLIQAG +G+LQGAERFDHTRGY+FSTYVQYWIRK+MS +V+RH RG+
Sbjct: 346 RNYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSMMVSRHARGVH 405
Query: 1246 VPVALSTTINRVQKARKSLKRSLG-KHPDDVEVAKFTGLTLEKVKSADNCLRIVGSLDQK 1422
+P ++ TIN++QKARK+LK S G K+P D +++K T L+++K+++A+ CL++VGS+++K
Sbjct: 406 IPSSIIRTINQIQKARKTLKTSHGIKYPADEDISKLTSLSVKKIRAANQCLKVVGSIEKK 465
Query: 1423 IGDFINMKYLECTPDTSIKIPEKVVTKQHMKNDINKLLQHLDPKEKRVMILRYGLGGH-C 1599
+GD + K+LE TPDT+++ PE+ V +Q + DI+ LL+ L+P+EK+VM+LRYGL +
Sbjct: 466 VGDCFSTKFLEFTPDTTMESPEEAVMRQSARRDIHDLLEGLEPREKQVMVLRYGLQNYRP 525
Query: 1600 MSLHEVGKIFDVSKEWIRKLEKRALTKLKSEENQRSLMHYLNQ 1728
SL E+GK+ VSKEWIRK+E+RA+ KL+ + N L +YLNQ
Sbjct: 526 KSLEEIGKLLRVSKEWIRKIERRAMAKLRDQPNAEDLRYYLNQ 568
>dbj|BAA22215.1| plastid RNA polymerase sigma-subunit [Arabidopsis thaliana]
Length = 571
Score = 404 bits (1038), Expect = e-110
Identities = 224/519 (43%), Positives = 331/519 (63%), Gaps = 14/519 (2%)
Frame = +1
Query: 214 SARLSLLTIGFDESEMLHKDTLRQHACSSSASLTVDDDYSNLEVAISKKSRKGLHNMIND 393
+ R S L+ +ES + D+L+ C+S + T ++ V + K K
Sbjct: 82 ATRWSFLSSVKEESRIYQNDSLKACGCASVSPYTAQNN-----VYVELKDPK-------- 128
Query: 394 TQVISDRDTSVYVRSIRACSASHFHVLMENINVLENR--VSDSEKLETDILVQLGRLGAL 567
+ RS + S +++L +N+ LE DS ++E DI++Q+G+LGA
Sbjct: 129 ----ENIGVGSAERSYSSRSMLQYNLLAKNLLALEETFVALDSVRMERDIMLQMGKLGAA 184
Query: 568 QLFHDCLSR-TAEMLASPPPPPQVTEDSRQNDQIDSDLKKIVVYSKRKEARKLRQEKRLQ 744
+LF CLSR + S D+ N Q+ V S+RK +K R+
Sbjct: 185 ELFKTCLSRYRGSSITSCLSDTTELVDTTPNQQV-------FVSSRRKVKKKARR----- 232
Query: 745 ATCRSESSKRSSM---------HQMVSSSAKKTKARGRRAIIAKNEAEMSRGVKLAAQLE 897
++ +E+ +SS+ + V + K R +R I++NE EMS GVK+ A +E
Sbjct: 233 SSVTAENGDQSSLPIGLRTTWNNIDVPRVRRPPKYRKKRERISRNETEMSTGVKIVADME 292
Query: 898 QVKATLEKETGRAVSLNCWAEAAGIDVKALKHDLHFGWYCRDELIKSGRSLVLYLARYYR 1077
+++ LE+E+G+ SL+CWA AAG++ K L +LH+GWYCRDEL+KS RSLVL+LAR YR
Sbjct: 293 RIRTQLEEESGKVASLSCWAAAAGMNEKLLMRNLHYGWYCRDELVKSTRSLVLFLARNYR 352
Query: 1078 GQGVAYEDLIQAGNIGILQGAERFDHTRGYQFSTYVQYWIRKAMSQLVARHGRGIKVPVA 1257
G G+A+EDLIQAG +G+LQGAERFDHTRGY+FSTYVQYWIRK+MS +V+RH RG+ +P +
Sbjct: 353 GMGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSTMVSRHARGVHIPSS 412
Query: 1258 LSTTINRVQKARKSLKRSLG-KHPDDVEVAKFTGLTLEKVKSADNCLRIVGSLDQKIGDF 1434
+ TIN +QKARK+LK S G K+ D E+AK TG +++K+++A+ CL++VGS+D+K+GD
Sbjct: 413 IIRTINHIQKARKTLKTSHGIKYAADEEIAKLTGHSVKKIRAANQCLKVVGSIDKKVGDC 472
Query: 1435 INMKYLECTPDTSIKIPEKVVTKQHMKNDINKLLQHLDPKEKRVMILRYGLGGH-CMSLH 1611
K+LE TPDT+++ PE+ V +Q + DI+ LL+ L+P+EK+VM+LRYGL + SL
Sbjct: 473 FTTKFLEFTPDTTMESPEEAVMRQSARRDIHDLLEGLEPREKQVMVLRYGLQDYRPKSLE 532
Query: 1612 EVGKIFDVSKEWIRKLEKRALTKLKSEENQRSLMHYLNQ 1728
E+GK+F VSKEWIRK+E+RA+ KL+ + N L +YLNQ
Sbjct: 533 EIGKLFKVSKEWIRKIERRAMAKLRDQPNAEDLRYYLNQ 571
>gb|ESW33314.1| hypothetical protein PHAVU_001G059800g [Phaseolus vulgaris]
Length = 529
Score = 403 bits (1036), Expect = e-109
Identities = 232/528 (43%), Positives = 340/528 (64%), Gaps = 11/528 (2%)
Frame = +1
Query: 175 SSTSFRGKESDFNSARLSLLTIGFDESEMLHKDTLRQHACSSSASLTVDDDYSNLEVAIS 354
S +S KE+ FN +LSL T ++E E L KD R +A S+ +L ++ E ++
Sbjct: 30 SPSSAGVKETCFNCTKLSLPTTSYEEGEALQKDFGRVYAFSALDTLE-NESLGREETGVN 88
Query: 355 K--KSRKGLHNMINDTQVISDRDTSVYVRSIRACSASHFHVLMENINVLENRVSDSE--K 522
K +S G+H M +DTQ+ +SV + + + HF +LM+N++VLE +DSE +
Sbjct: 89 KGKRSLSGVHEMFDDTQMPFGEVSSVS-KKFESFTPQHFRLLMKNLDVLEEAFADSEALR 147
Query: 523 LETDILVQLGRLGALQLFHDCLSRTAEMLASPPPPPQVTEDSRQNDQIDSDLKKIVVYSK 702
LE I +QL +LGAL++F+ LS + D++ + K +V SK
Sbjct: 148 LEKAIRLQLEKLGALEIFNVYLSLVTDYA----------------DKVHNKGKCVVPSSK 191
Query: 703 RKEARKLRQEKRLQATCRSESSKRSSMHQ------MVSSSAKKTKARGRRAIIAKNEAEM 864
+K+ K R+++ + T S S ++Q VS + T ++ +R ++AK EAEM
Sbjct: 192 KKQ-NKTRRKREIGVTAVSSQSLTLKVNQEDLLGFSVSVVKRATNSKNKRMMVAKREAEM 250
Query: 865 SRGVKLAAQLEQVKATLEKETGRAVSLNCWAEAAGIDVKALKHDLHFGWYCRDELIKSGR 1044
++GVK+ A+LE+++ LE++T R V LN WAEA+G+D K L+ LH G+YCRDEL++S R
Sbjct: 251 AKGVKVLAELEKIRTALEEDTKRVVCLNHWAEASGVDEKVLQQLLHHGYYCRDELVRSSR 310
Query: 1045 SLVLYLARYYRGQGVAYEDLIQAGNIGILQGAERFDHTRGYQFSTYVQYWIRKAMSQLVA 1224
SLVLYLAR YRG G+A +DL+QAG +G+LQGAERFD TRGY+FSTYVQYWIRK++ ++V
Sbjct: 311 SLVLYLARKYRGMGIALDDLLQAGYVGVLQGAERFDSTRGYKFSTYVQYWIRKSILRVVE 370
Query: 1225 RHGRGIKVPVALSTTINRVQKARKSLKRSLGKHPDDVEVAKFTGLTLEKVKSADNCLRIV 1404
R+ RG+ +P +L+ I ++QKARK LK + K PDD E+AK TGL+L+K+KSA NCLRIV
Sbjct: 371 RYSRGVIIPWSLNRAIKQIQKARKVLKSTHKKSPDDCEIAKMTGLSLDKIKSASNCLRIV 430
Query: 1405 GSLDQKIGDFINMKYLECTPDTSIKIPEKVVTKQHMKNDINKLLQHLDPKEKRVMILRYG 1584
S+DQK E PDT+I+ PE V KQHMK D++ LL+ L+ +E++++ LR+G
Sbjct: 431 ASIDQK----------ELLPDTTIESPENGVLKQHMKKDVHDLLKGLNSRERQILSLRFG 480
Query: 1585 L-GGHCMSLHEVGKIFDVSKEWIRKLEKRALTKLKSEENQRSLMHYLN 1725
L SL ++G +F VSKE IRK+EK ALTKL++E L +YL+
Sbjct: 481 LIDNQPKSLQDIGTLFKVSKERIRKIEKIALTKLRNEATTSDLHYYLD 528