BLASTX nr result

ID: Achyranthes23_contig00011179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00011179
         (761 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27684.1|PSRP5_SPIOL RecName: Full=50S ribosomal protein 5 al...    82   2e-13
gb|AAF72995.1|AF261940_1 ribosomal protein 5 precursor [Spinacia...    82   2e-13

>sp|P27684.1|PSRP5_SPIOL RecName: Full=50S ribosomal protein 5 alpha, chloroplastic;
           AltName: Full=50S ribosomal protein L40; AltName:
           Full=CL40; AltName: Full=Plastid-specific 50S ribosomal
           protein 5 alpha; Short=PSRP-5; Contains: RecName:
           Full=50S ribosomal protein 5 beta, chloroplastic;
           Contains: RecName: Full=50S ribosomal protein 5 gamma,
           chloroplastic; Flags: Precursor gi|170141|gb|AAA34044.1|
           ribosomal protein L40 [Spinacia oleracea]
          Length = 142

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 59/142 (41%), Positives = 68/142 (47%), Gaps = 10/142 (7%)
 Frame = -2

Query: 688 MALLSTHLFLSPTPPITSIAVSSS-FSIRLQNVSVALKPTLRHSFVAHAPVTAQRRCSLV 512
           MALLS  L LS  PPITSIAVSSS F I+LQNVSVAL P+     VAH PV AQ+R ++V
Sbjct: 1   MALLSPLLSLSSVPPITSIAVSSSSFPIKLQNVSVALLPSFGQRLVAHGPVIAQKRGTVV 60

Query: 511 SMASA---------GXXXXXXXXSIPIQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 359
           +M SA         G        +I +QN                               
Sbjct: 61  AMVSAAAEETAGEDGDQSKVEEANISVQNLPLESKLQLKLEQKIKMKMAKKIRLRRTGLC 120

Query: 358 XXXXXXXKGRWPPSKMKKLKNV 293
                  +G WPPSKMKKLKNV
Sbjct: 121 AKESLRKRGAWPPSKMKKLKNV 142


>gb|AAF72995.1|AF261940_1 ribosomal protein 5 precursor [Spinacia oleracea]
          Length = 142

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 59/142 (41%), Positives = 68/142 (47%), Gaps = 10/142 (7%)
 Frame = -2

Query: 688 MALLSTHLFLSPTPPITSIAVSSS-FSIRLQNVSVALKPTLRHSFVAHAPVTAQRRCSLV 512
           MALLS  L LS  PPITSIAVSSS F I+LQNVSVAL P+     VAH PV AQ+R ++V
Sbjct: 1   MALLSPLLSLSSVPPITSIAVSSSSFPIKLQNVSVALLPSFGQRLVAHGPVIAQKRGTVV 60

Query: 511 SMASA---------GXXXXXXXXSIPIQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 359
           +M SA         G        +I +QN                               
Sbjct: 61  AMVSAAAEETAGEDGDQSKVEEANISVQNLPLESKLQLKLEQKIKMKMAKKIRLRRNRLM 120

Query: 358 XXXXXXXKGRWPPSKMKKLKNV 293
                  +G WPPSKMKKLKNV
Sbjct: 121 RKRKLRKRGAWPPSKMKKLKNV 142


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