BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00010638
         (1926 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006345427.1| PREDICTED: DNA topoisomerase 2-like [Solanum...   270   2e-69
ref|XP_004229644.1| PREDICTED: DNA topoisomerase 2-like [Solanum...   267   1e-68
ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v...   266   3e-68
gb|EOY18139.1| Topoisomerase II isoform 3 [Theobroma cacao]           265   5e-68
gb|EOY18138.1| DNA topoisomerase 2 isoform 2 [Theobroma cacao]        265   5e-68
gb|EOY18137.1| DNA topoisomerase 2 isoform 1 [Theobroma cacao]        265   5e-68
ref|XP_006838283.1| hypothetical protein AMTR_s00103p00101630 [A...   255   4e-65
ref|XP_001758663.1| predicted protein [Physcomitrella patens] gi...   254   7e-65
gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984...   254   1e-64
ref|XP_002298421.2| DNA topoisomerase family protein [Populus tr...   251   1e-63
gb|EMJ21781.1| hypothetical protein PRUPE_ppa000202mg [Prunus pe...   250   2e-63
ref|XP_004953539.1| PREDICTED: DNA topoisomerase 2-like [Setaria...   249   4e-63
gb|EXB68160.1| DNA topoisomerase 2 [Morus notabilis]                  248   5e-63
emb|CAJ44361.1| putative DNA topoisomerase II [Malus domestica]       247   1e-62
ref|XP_006482851.1| PREDICTED: DNA topoisomerase 2-like [Citrus ...   246   3e-62
ref|XP_006439079.1| hypothetical protein CICLE_v10030505mg [Citr...   246   3e-62
ref|XP_006439078.1| hypothetical protein CICLE_v10030505mg [Citr...   246   3e-62
ref|XP_002972906.1| hypothetical protein SELMODRAFT_98330 [Selag...   246   3e-62
ref|XP_002988023.1| hypothetical protein SELMODRAFT_127267 [Sela...   246   3e-62
ref|XP_002994651.1| hypothetical protein SELMODRAFT_138946 [Sela...   246   3e-62

>ref|XP_006345427.1| PREDICTED: DNA topoisomerase 2-like [Solanum tuberosum]
          Length = 1485

 Score =  270 bits (689), Expect = 2e-69
 Identities = 139/280 (49%), Positives = 195/280 (69%)
 Frame = -1

Query: 1926 KTARKDTGVTYXXXXXXXXXXXXXXXXXXTLRITELPIRKWTQDYKEFLGSLSPSSNDKS 1747
            KTA K+TG TY                   LRI+ELP+R+WT+DYK+FL S++ S+ DKS
Sbjct: 881  KTATKETGATYTVTGIIEEFSETT------LRISELPVRRWTEDYKQFLESMTVST-DKS 933

Query: 1746 KEAFIKDFHDHSTDDTACFEVILSKRNYNVAKQEGLMKKFKLTTNLSTSNMHLFDKDNKI 1567
            K+AFIK+   +  +++ CFEVI+S+ N  +A+QEGL+KKFKLTT +STSNMHLFD   KI
Sbjct: 934  KDAFIKEVRAYGDENSVCFEVIMSEENLLLAQQEGLLKKFKLTTTISTSNMHLFDSKGKI 993

Query: 1566 VRYESPEEILEKFFHLRLVYYTKRKERYLEIYQSELVKLDNQVRFILGVVEGEIVVSKRK 1387
             +Y++PEEILE+F+H+RL YY KRK+  LEI + EL++++N+VRFILGVV+GEI+V+ RK
Sbjct: 994  KKYDAPEEILEEFYHVRLEYYEKRKKTLLEILELELLRIENKVRFILGVVKGEIIVNNRK 1053

Query: 1386 KAELVNELRDKGFTPIPXXXXXXXXXXXXXXXXXXXXDTNENPASNAPLLSDYDYLLSMA 1207
            +A+L+ EL++KGFTP P                    ++ E  ++     SDYDYLLSMA
Sbjct: 1054 RADLLLELKNKGFTPFPKKKPVEAVVADSTDDAEDSEESPEE-SNKGVRASDYDYLLSMA 1112

Query: 1206 IGSLTYEKVKELCDNRDKVLDQIEQLKKETEQSLWARDLD 1087
            IG+LT EKV+ELC +RDK+  ++E ++  T + LW +DLD
Sbjct: 1113 IGTLTLEKVQELCADRDKLNAEVEDMRNATPKDLWMKDLD 1152



 Score =  106 bits (264), Expect = 4e-20
 Identities = 71/186 (38%), Positives = 104/186 (55%), Gaps = 22/186 (11%)
 Frame = -3

Query: 814  DEDIPDLRQRLAAYHLDSSPDKSEM-ETDAPKVDAKKPS---------------IAXXXX 683
            ++++  L+ RLAAY+L+SSPD+SE+ ET+APK   K P+               ++    
Sbjct: 1252 EDEVLALKDRLAAYNLNSSPDRSEVTETEAPKAQTKAPAKRAAAQKKALPSTPDVSEGED 1311

Query: 682  XXXXXXEGSFEPEPTKKGRGRQASRKPPNPSAAT-----KKRGPAAKKSQA-GQKLITDS 521
                  +  F PE    G+ ++  RKP    AA      KKR PA K+SQ+ GQ+LIT  
Sbjct: 1312 EIEISDDNEFAPEVAVGGK-KKGGRKPAAAKAAAAPKPPKKRAPANKQSQSVGQRLITQV 1370

Query: 520  FKASEPTETSPDMKVRRMRPSPFNKKSGSVLDKLASSSATAGEDSAENVDISSLVLDSID 341
             K +E    SPD KVR+MR SPFNKKSG+V+ +  SSS++   +S  +  I S  L S++
Sbjct: 1371 LKPAEDAGVSPDRKVRKMRESPFNKKSGAVMGRNTSSSSSTSHESEVSPPIPS--LGSLE 1428

Query: 340  EEPKDI 323
            EE  ++
Sbjct: 1429 EEVSEV 1434


>ref|XP_004229644.1| PREDICTED: DNA topoisomerase 2-like [Solanum lycopersicum]
          Length = 1477

 Score =  267 bits (683), Expect = 1e-68
 Identities = 138/280 (49%), Positives = 195/280 (69%)
 Frame = -1

Query: 1926 KTARKDTGVTYXXXXXXXXXXXXXXXXXXTLRITELPIRKWTQDYKEFLGSLSPSSNDKS 1747
            KTA K+TG TY                   LRI+ELP+R+WT+DYK+FL S++ S+ DK+
Sbjct: 881  KTATKETGATYTVTGIIEEVSETT------LRISELPVRRWTEDYKQFLESMTVST-DKA 933

Query: 1746 KEAFIKDFHDHSTDDTACFEVILSKRNYNVAKQEGLMKKFKLTTNLSTSNMHLFDKDNKI 1567
            K++FIK+   +  +++ CFEVI+S+ N  +A+QEGL+KKFKLTT +STSNMHLFD   KI
Sbjct: 934  KDSFIKEVRAYGDENSVCFEVIMSEDNLLLAQQEGLLKKFKLTTTISTSNMHLFDSKGKI 993

Query: 1566 VRYESPEEILEKFFHLRLVYYTKRKERYLEIYQSELVKLDNQVRFILGVVEGEIVVSKRK 1387
             +Y++PEEILE+F+H+RL YY KRK+  LEI + EL++++N+V+FILGVV+GEI+V+ RK
Sbjct: 994  KKYDAPEEILEEFYHVRLEYYEKRKKALLEILELELLRIENKVKFILGVVKGEIIVNNRK 1053

Query: 1386 KAELVNELRDKGFTPIPXXXXXXXXXXXXXXXXXXXXDTNENPASNAPLLSDYDYLLSMA 1207
            +AEL+ EL++KGFTP P                    ++ E  +S     SDYDYLLSMA
Sbjct: 1054 RAELLLELKNKGFTPFPKKKPVEAVVADSTDDADDSEESPEE-SSRGVRASDYDYLLSMA 1112

Query: 1206 IGSLTYEKVKELCDNRDKVLDQIEQLKKETEQSLWARDLD 1087
            IG+LT EKV+ELC +RDK+  ++E ++  T + LW +DLD
Sbjct: 1113 IGTLTLEKVQELCADRDKLNAEVEDMRNATPKHLWMKDLD 1152



 Score =  102 bits (253), Expect = 8e-19
 Identities = 71/187 (37%), Positives = 102/187 (54%), Gaps = 23/187 (12%)
 Frame = -3

Query: 814  DEDIPDLRQRLAAYHLDSSPDKSEM-ETDAPKVDAKKPSI--------------AXXXXX 680
            ++++  L+ RLAAY+L+SSPD+SE+ ET+ PK   K P+                     
Sbjct: 1245 EDEVLALKDRLAAYNLNSSPDRSEVTETEVPKAQTKAPAKRAAAQKKALPSTPDVSDGED 1304

Query: 679  XXXXXEGSFEPEPTKKGRGRQASRKPPNPSAATK-----KRGPAAKKSQA-GQKLITDSF 518
                 +  FEP     G+ ++  RKP    AA       K+ PA  +SQ+ GQ+LIT   
Sbjct: 1305 AIEIDDDEFEPAAAVGGK-KKGGRKPAAAKAAAAPKPPGKKAPANNQSQSVGQRLITQVL 1363

Query: 517  KASEPTETSPDMKVRRMRPSPFNKKSGSVLDKLASSSATAGEDSAENVDISSLV--LDSI 344
            K +E    SPD KVR+MR SPFNKKSG+V+ K  SSS+T+  +S E   +S L+  L S+
Sbjct: 1364 KPAEDAGVSPDRKVRKMRASPFNKKSGAVMGKNTSSSSTSSHESEE---VSPLIPSLGSL 1420

Query: 343  DEEPKDI 323
            DEE  ++
Sbjct: 1421 DEEVSEV 1427


>ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
          Length = 1489

 Score =  266 bits (679), Expect = 3e-68
 Identities = 137/251 (54%), Positives = 179/251 (71%), Gaps = 1/251 (0%)
 Frame = -1

Query: 1836 LRITELPIRKWTQDYKEFLGSLSPSSNDKSKEAFIKDFHDHSTDDTACFEVILSKRNYNV 1657
            LRI+ELP+RKWTQDYKEFL S+  + NDK K+ FIKD+ +H+ D T  FEVI+S+ N  +
Sbjct: 909  LRISELPVRKWTQDYKEFLESIM-TGNDKIKDPFIKDYKEHNDDTTVHFEVIMSEENLLM 967

Query: 1656 AKQEGLMKKFKLTTNLSTSNMHLFDKDNKIVRYESPEEILEKFFHLRLVYYTKRKERYLE 1477
            AKQEGL++KFKLTT +STSNMHLFD +  I +YE+PE+ILE+FFHLRL +Y KRK   L+
Sbjct: 968  AKQEGLLQKFKLTTKISTSNMHLFDSNGTIKKYETPEQILEEFFHLRLEFYEKRKRVLLD 1027

Query: 1476 IYQSELVKLDNQVRFILGVVEGEIVVSKRKKAELVNELRDKGFTPIPXXXXXXXXXXXXX 1297
              + EL+KL+N+VRFILGVV GEI+VS RK+A+L +EL  KGFTP P             
Sbjct: 1028 NLELELLKLENKVRFILGVVRGEIIVSNRKRADLFHELHQKGFTPFPKKSKSVEIAVAGA 1087

Query: 1296 XXXXXXXDTNENPASNAPL-LSDYDYLLSMAIGSLTYEKVKELCDNRDKVLDQIEQLKKE 1120
                   + N +  S   +  +DY+YLLSMAIG+LT EKV+ELC +RDK+   ++ LKK 
Sbjct: 1088 TDDTEEAEENTDAVSKGGVRATDYEYLLSMAIGTLTLEKVQELCADRDKLNKGVDDLKKA 1147

Query: 1119 TEQSLWARDLD 1087
            T ++LW  DLD
Sbjct: 1148 TPKALWITDLD 1158



 Score = 89.0 bits (219), Expect = 7e-15
 Identities = 67/179 (37%), Positives = 91/179 (50%), Gaps = 33/179 (18%)
 Frame = -3

Query: 814  DEDIPDLRQRLAAYHLDSSPDKSE-METDAPKVDA-------------KKPSIAXXXXXX 677
            D+++ +L++RLAAY+L+SSPD S  ME + P+V A             KKP  +      
Sbjct: 1263 DDEVHELKERLAAYNLESSPDGSAAMEAEVPQVPAARKKEPSRRAAAQKKPLASFTEISD 1322

Query: 676  XXXXEGSFEPEPT-----KKGRGRQ------ASRKPPNPSAATKKRGPAAKKSQA--GQK 536
                +  FE E       KK  GR+      A+   P  +AA  KRG A K+     GQ 
Sbjct: 1323 DDEDDEDFEVEEVSASDVKKKGGRKPAANAKAAAAKPAAAAAKNKRGAANKQQPQLLGQT 1382

Query: 535  LITDSFKASEPTETSPDMKVRRMRPSPFNKKSGSVL------DKLASSSATAGEDSAEN 377
            L+T+ FK +E    SP+ KVR+MR SPFNKKSGSVL      D+ A +   +G  S  N
Sbjct: 1383 LLTEIFKPAETLGISPEKKVRKMRASPFNKKSGSVLGSTGEEDETAETEENSGSASTSN 1441


>gb|EOY18139.1| Topoisomerase II isoform 3 [Theobroma cacao]
          Length = 1244

 Score =  265 bits (677), Expect = 5e-68
 Identities = 141/280 (50%), Positives = 184/280 (65%)
 Frame = -1

Query: 1926 KTARKDTGVTYXXXXXXXXXXXXXXXXXXTLRITELPIRKWTQDYKEFLGSLSPSSNDKS 1747
            KTA K+ GVTY                   LRITELP+R+WTQDY+EFL S+   +    
Sbjct: 881  KTASKEAGVTYTITGIIEEVDETT------LRITELPVRRWTQDYREFLESIITGN---- 930

Query: 1746 KEAFIKDFHDHSTDDTACFEVILSKRNYNVAKQEGLMKKFKLTTNLSTSNMHLFDKDNKI 1567
             + FIK+F  +S D T  FEVIL++ N  VAKQEGL+KKFKLTT +STSNMHLFD    I
Sbjct: 931  -DPFIKEFRQYSDDTTVEFEVILTEENMMVAKQEGLLKKFKLTTTISTSNMHLFDSKGMI 989

Query: 1566 VRYESPEEILEKFFHLRLVYYTKRKERYLEIYQSELVKLDNQVRFILGVVEGEIVVSKRK 1387
             +Y++PE+ILE+FFHLR  +Y KRK+  L+  + EL+K++N+VRFILGVV+GEI+V+ RK
Sbjct: 990  KKYDTPEQILEEFFHLRFEFYEKRKKLLLDNLEMELLKMENKVRFILGVVKGEIIVNNRK 1049

Query: 1386 KAELVNELRDKGFTPIPXXXXXXXXXXXXXXXXXXXXDTNENPASNAPLLSDYDYLLSMA 1207
            +A+L  EL+ KGFTP P                    + N   ++     SDYDYLLSMA
Sbjct: 1050 RADLFLELQTKGFTPFPKKAKTVEVAVAGATDDTEETEENSEVSAKGLQASDYDYLLSMA 1109

Query: 1206 IGSLTYEKVKELCDNRDKVLDQIEQLKKETEQSLWARDLD 1087
            IGSLT EKV+ELC +RDK+  ++E L+K T +SLW +DLD
Sbjct: 1110 IGSLTLEKVQELCADRDKLQQEVEDLRKATPKSLWLKDLD 1149


>gb|EOY18138.1| DNA topoisomerase 2 isoform 2 [Theobroma cacao]
          Length = 1285

 Score =  265 bits (677), Expect = 5e-68
 Identities = 141/280 (50%), Positives = 184/280 (65%)
 Frame = -1

Query: 1926 KTARKDTGVTYXXXXXXXXXXXXXXXXXXTLRITELPIRKWTQDYKEFLGSLSPSSNDKS 1747
            KTA K+ GVTY                   LRITELP+R+WTQDY+EFL S+   +    
Sbjct: 692  KTASKEAGVTYTITGIIEEVDETT------LRITELPVRRWTQDYREFLESIITGN---- 741

Query: 1746 KEAFIKDFHDHSTDDTACFEVILSKRNYNVAKQEGLMKKFKLTTNLSTSNMHLFDKDNKI 1567
             + FIK+F  +S D T  FEVIL++ N  VAKQEGL+KKFKLTT +STSNMHLFD    I
Sbjct: 742  -DPFIKEFRQYSDDTTVEFEVILTEENMMVAKQEGLLKKFKLTTTISTSNMHLFDSKGMI 800

Query: 1566 VRYESPEEILEKFFHLRLVYYTKRKERYLEIYQSELVKLDNQVRFILGVVEGEIVVSKRK 1387
             +Y++PE+ILE+FFHLR  +Y KRK+  L+  + EL+K++N+VRFILGVV+GEI+V+ RK
Sbjct: 801  KKYDTPEQILEEFFHLRFEFYEKRKKLLLDNLEMELLKMENKVRFILGVVKGEIIVNNRK 860

Query: 1386 KAELVNELRDKGFTPIPXXXXXXXXXXXXXXXXXXXXDTNENPASNAPLLSDYDYLLSMA 1207
            +A+L  EL+ KGFTP P                    + N   ++     SDYDYLLSMA
Sbjct: 861  RADLFLELQTKGFTPFPKKAKTVEVAVAGATDDTEETEENSEVSAKGLQASDYDYLLSMA 920

Query: 1206 IGSLTYEKVKELCDNRDKVLDQIEQLKKETEQSLWARDLD 1087
            IGSLT EKV+ELC +RDK+  ++E L+K T +SLW +DLD
Sbjct: 921  IGSLTLEKVQELCADRDKLQQEVEDLRKATPKSLWLKDLD 960



 Score =  100 bits (248), Expect = 3e-18
 Identities = 85/213 (39%), Positives = 104/213 (48%), Gaps = 34/213 (15%)
 Frame = -3

Query: 814  DED--IPDLRQRLAAYHLDSSPDKSE-METDAPKVDAKKPSIAXXXXXXXXXXEGSFEPE 644
            DED  IPDLR+RLA Y+LDSSPD S  MET+ P+V A K   +            S    
Sbjct: 1056 DEDFGIPDLRERLAKYNLDSSPDHSAAMETEVPQVPAGKKEPSKRAAAARKKPATSLSEI 1115

Query: 643  PTKKGR--------------------GRQASRKPP-------NPSAATKKRGPAA--KKS 551
                G                     G++  RKP         P AA KKRGPAA  KKS
Sbjct: 1116 SESIGEIDINDEDLEVVEVAAAAAPAGKKGGRKPAANSKAAAKPPAAAKKRGPAAAGKKS 1175

Query: 550  QAGQKLITDSFKASEPTETSPDMKVRRMRPSPFNKKSGSVLDKLASSSATAGEDSAENVD 371
            Q  QKL+T+  K +E +  SP+ KVR+MR SPFNKKSGSVL ++     +   DS E   
Sbjct: 1176 QQ-QKLLTEMLKPAEDSGISPEKKVRKMRASPFNKKSGSVLGRVGKELEST-TDSEETFG 1233

Query: 370  ISSLVLDSIDEEPKDI--XXXXXXXXXRKQTTY 278
             SS+  D+  EE  +I           RKQTTY
Sbjct: 1234 SSSMSADT--EEVTEIVPARPRPQRTNRKQTTY 1264


>gb|EOY18137.1| DNA topoisomerase 2 isoform 1 [Theobroma cacao]
          Length = 1473

 Score =  265 bits (677), Expect = 5e-68
 Identities = 141/280 (50%), Positives = 184/280 (65%)
 Frame = -1

Query: 1926 KTARKDTGVTYXXXXXXXXXXXXXXXXXXTLRITELPIRKWTQDYKEFLGSLSPSSNDKS 1747
            KTA K+ GVTY                   LRITELP+R+WTQDY+EFL S+   +    
Sbjct: 881  KTASKEAGVTYTITGIIEEVDETT------LRITELPVRRWTQDYREFLESIITGN---- 930

Query: 1746 KEAFIKDFHDHSTDDTACFEVILSKRNYNVAKQEGLMKKFKLTTNLSTSNMHLFDKDNKI 1567
             + FIK+F  +S D T  FEVIL++ N  VAKQEGL+KKFKLTT +STSNMHLFD    I
Sbjct: 931  -DPFIKEFRQYSDDTTVEFEVILTEENMMVAKQEGLLKKFKLTTTISTSNMHLFDSKGMI 989

Query: 1566 VRYESPEEILEKFFHLRLVYYTKRKERYLEIYQSELVKLDNQVRFILGVVEGEIVVSKRK 1387
             +Y++PE+ILE+FFHLR  +Y KRK+  L+  + EL+K++N+VRFILGVV+GEI+V+ RK
Sbjct: 990  KKYDTPEQILEEFFHLRFEFYEKRKKLLLDNLEMELLKMENKVRFILGVVKGEIIVNNRK 1049

Query: 1386 KAELVNELRDKGFTPIPXXXXXXXXXXXXXXXXXXXXDTNENPASNAPLLSDYDYLLSMA 1207
            +A+L  EL+ KGFTP P                    + N   ++     SDYDYLLSMA
Sbjct: 1050 RADLFLELQTKGFTPFPKKAKTVEVAVAGATDDTEETEENSEVSAKGLQASDYDYLLSMA 1109

Query: 1206 IGSLTYEKVKELCDNRDKVLDQIEQLKKETEQSLWARDLD 1087
            IGSLT EKV+ELC +RDK+  ++E L+K T +SLW +DLD
Sbjct: 1110 IGSLTLEKVQELCADRDKLQQEVEDLRKATPKSLWLKDLD 1149



 Score =  100 bits (248), Expect = 3e-18
 Identities = 85/213 (39%), Positives = 104/213 (48%), Gaps = 34/213 (15%)
 Frame = -3

Query: 814  DED--IPDLRQRLAAYHLDSSPDKSE-METDAPKVDAKKPSIAXXXXXXXXXXEGSFEPE 644
            DED  IPDLR+RLA Y+LDSSPD S  MET+ P+V A K   +            S    
Sbjct: 1244 DEDFGIPDLRERLAKYNLDSSPDHSAAMETEVPQVPAGKKEPSKRAAAARKKPATSLSEI 1303

Query: 643  PTKKGR--------------------GRQASRKPP-------NPSAATKKRGPAA--KKS 551
                G                     G++  RKP         P AA KKRGPAA  KKS
Sbjct: 1304 SESIGEIDINDEDLEVVEVAAAAAPAGKKGGRKPAANSKAAAKPPAAAKKRGPAAAGKKS 1363

Query: 550  QAGQKLITDSFKASEPTETSPDMKVRRMRPSPFNKKSGSVLDKLASSSATAGEDSAENVD 371
            Q  QKL+T+  K +E +  SP+ KVR+MR SPFNKKSGSVL ++     +   DS E   
Sbjct: 1364 QQ-QKLLTEMLKPAEDSGISPEKKVRKMRASPFNKKSGSVLGRVGKELEST-TDSEETFG 1421

Query: 370  ISSLVLDSIDEEPKDI--XXXXXXXXXRKQTTY 278
             SS+  D+  EE  +I           RKQTTY
Sbjct: 1422 SSSMSADT--EEVTEIVPARPRPQRTNRKQTTY 1452


>ref|XP_006838283.1| hypothetical protein AMTR_s00103p00101630 [Amborella trichopoda]
            gi|548840751|gb|ERN00852.1| hypothetical protein
            AMTR_s00103p00101630 [Amborella trichopoda]
          Length = 1505

 Score =  255 bits (652), Expect = 4e-65
 Identities = 133/250 (53%), Positives = 174/250 (69%)
 Frame = -1

Query: 1836 LRITELPIRKWTQDYKEFLGSLSPSSNDKSKEAFIKDFHDHSTDDTACFEVILSKRNYNV 1657
            LRITELPIR+WT+DYK +L SL   S +K+KE FI D+ +H+TD    F+V+L + N  +
Sbjct: 917  LRITELPIRRWTEDYKVYLESLRTGS-EKTKEPFIVDYKEHNTDTRVHFDVLLPEENMKI 975

Query: 1656 AKQEGLMKKFKLTTNLSTSNMHLFDKDNKIVRYESPEEILEKFFHLRLVYYTKRKERYLE 1477
            ++QEGLMK FKLTT +STSNMHLF+    I +Y++PE+ILE+FFHLRL YY KRK+  L+
Sbjct: 976  SQQEGLMKMFKLTTTISTSNMHLFNAKGVIKKYDTPEQILEEFFHLRLDYYGKRKKVLLD 1035

Query: 1476 IYQSELVKLDNQVRFILGVVEGEIVVSKRKKAELVNELRDKGFTPIPXXXXXXXXXXXXX 1297
              + EL+KLDN+ RFILGVV GEIVVSKRK+A+LV ELRDKGFTP P             
Sbjct: 1036 NLELELLKLDNKARFILGVVNGEIVVSKRKRADLVLELRDKGFTPFPKKSKNVEAALAGA 1095

Query: 1296 XXXXXXXDTNENPASNAPLLSDYDYLLSMAIGSLTYEKVKELCDNRDKVLDQIEQLKKET 1117
                   + +          SDYDYLLSMAIG+LT EKV+ELC  +DK+   +++L+  T
Sbjct: 1096 TPVDEEGEESPEVDDRGINASDYDYLLSMAIGTLTIEKVQELCAEKDKLEHDVKELRGLT 1155

Query: 1116 EQSLWARDLD 1087
             ++LW +DLD
Sbjct: 1156 PKALWIKDLD 1165



 Score = 69.7 bits (169), Expect = 4e-09
 Identities = 44/95 (46%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
 Frame = -3

Query: 643  PTKKGRGRQA-SRKPPNPSAATKKRGPAAKKSQA-GQKLITDSFKASEPTETSPDMKVRR 470
            P  KGR ++  S KP  P+ A KKRG A+ K     QKLIT+  K   P   SP+ KVR+
Sbjct: 1373 PKPKGRAKKPLSNKPKAPTGAAKKRGAASSKQPILNQKLITEVLK---PVGVSPEKKVRK 1429

Query: 469  MRPSPFNKKSGSVLDKLASSSATAGEDSAENVDIS 365
            MR SPFNKKSGSVL ++   S    E+S +   +S
Sbjct: 1430 MRASPFNKKSGSVLGRIERES--KAEESKDGSPLS 1462


>ref|XP_001758663.1| predicted protein [Physcomitrella patens] gi|162690273|gb|EDQ76641.1|
            predicted protein [Physcomitrella patens]
          Length = 1238

 Score =  254 bits (650), Expect = 7e-65
 Identities = 137/279 (49%), Positives = 183/279 (65%)
 Frame = -1

Query: 1923 TARKDTGVTYXXXXXXXXXXXXXXXXXXTLRITELPIRKWTQDYKEFLGSLSPSSNDKSK 1744
            +A KD G+TY                   ++I ELP+RKWTQDYKEFL +L   S DK+K
Sbjct: 886  SATKDIGLTYTITGTIEQIDETT------IKILELPVRKWTQDYKEFLDALMTPS-DKNK 938

Query: 1743 EAFIKDFHDHSTDDTACFEVILSKRNYNVAKQEGLMKKFKLTTNLSTSNMHLFDKDNKIV 1564
            E FIKDF +H+TD    FE+ LS+ N  +A  EGL+KKFKLTT +STSNMHLFD    I 
Sbjct: 939  EPFIKDFREHNTDTKVHFELTLSEENMAIALAEGLVKKFKLTTTISTSNMHLFDAKGIIK 998

Query: 1563 RYESPEEILEKFFHLRLVYYTKRKERYLEIYQSELVKLDNQVRFILGVVEGEIVVSKRKK 1384
            +Y++PE+ILE+FFH+RL  Y KRK   L+  Q ELVK+DN+VRFILGVV+GEI+V+ RK+
Sbjct: 999  KYDTPEQILEEFFHIRLDLYVKRKAVQLQNLQYELVKVDNKVRFILGVVKGEIIVNNRKR 1058

Query: 1383 AELVNELRDKGFTPIPXXXXXXXXXXXXXXXXXXXXDTNENPASNAPLLSDYDYLLSMAI 1204
             +L++EL+ KGF P P                    + +E        ++DYDYLLSM I
Sbjct: 1059 IDLLSELQHKGFAPFPKKAKSPDPPVVGADPLPEDNEQDEK--VKGVKVADYDYLLSMPI 1116

Query: 1203 GSLTYEKVKELCDNRDKVLDQIEQLKKETEQSLWARDLD 1087
            GSLTYEKV++L   RDK+ +++E+LK+ T ++LW +DLD
Sbjct: 1117 GSLTYEKVQQLRGQRDKMEEEVEELKRATPEALWIKDLD 1155


>gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984168|gb|AAN85208.1|
            DNA topoisomerase II [Nicotiana tabacum]
          Length = 1482

 Score =  254 bits (648), Expect = 1e-64
 Identities = 130/280 (46%), Positives = 188/280 (67%)
 Frame = -1

Query: 1926 KTARKDTGVTYXXXXXXXXXXXXXXXXXXTLRITELPIRKWTQDYKEFLGSLSPSSNDKS 1747
            KTA K+ G TY                   LRI+ELP+R+WT+DYK+FL S++ S NDK+
Sbjct: 880  KTATKEAGATYTVTGIIEEVNETT------LRISELPVRRWTEDYKQFLESMTVS-NDKA 932

Query: 1746 KEAFIKDFHDHSTDDTACFEVILSKRNYNVAKQEGLMKKFKLTTNLSTSNMHLFDKDNKI 1567
            K+ FIK+   +  +++ CFEVI+S+ N  +A+QEGL+KKFKL T +STSNMHLFD + KI
Sbjct: 933  KDPFIKEVRAYGDENSVCFEVIMSEENLILAQQEGLLKKFKLATTISTSNMHLFDSNGKI 992

Query: 1566 VRYESPEEILEKFFHLRLVYYTKRKERYLEIYQSELVKLDNQVRFILGVVEGEIVVSKRK 1387
             +Y++PE+ILE+F+H+RL YY KRK+  LEI + EL++++N+V+FILGVV+ EI+V+ RK
Sbjct: 993  KKYDNPEDILEEFYHVRLEYYEKRKKALLEILELELLRIENKVKFILGVVKVEIIVNNRK 1052

Query: 1386 KAELVNELRDKGFTPIPXXXXXXXXXXXXXXXXXXXXDTNENPASNAPLLSDYDYLLSMA 1207
            +A+L+ EL++KGFTP P                    + +E   +      DYDYLLSM 
Sbjct: 1053 RADLLLELKEKGFTPFP----KKKAVEAVVADTSDDAEDSEEELNRGVRAGDYDYLLSMP 1108

Query: 1206 IGSLTYEKVKELCDNRDKVLDQIEQLKKETEQSLWARDLD 1087
            IG+LT EKV+ELC  RD++  ++E ++  T + LW +DLD
Sbjct: 1109 IGTLTLEKVQELCAERDQLNGEVEDMRNATPKLLWLKDLD 1148



 Score = 96.7 bits (239), Expect = 3e-17
 Identities = 74/205 (36%), Positives = 104/205 (50%), Gaps = 26/205 (12%)
 Frame = -3

Query: 814  DEDIPDLRQRLAAYHLDSSPDKSE--METDAPKVDAKKPS---------------IAXXX 686
            D+++  L+ RLAAY+L+SSPD S   MET+APK   K P+               ++   
Sbjct: 1251 DDEVLALKDRLAAYNLNSSPDHSAEAMETEAPKAQKKAPTRKAAAKKKTLPSIADVSEGE 1310

Query: 685  XXXXXXXEGSFEPEPTKKGRGRQASRKPPNPSAAT-------KKRGPAAKKSQA-GQKLI 530
                   +   EPE    G+ ++  RKP    AA        KKRGPA K++   GQKLI
Sbjct: 1311 DEIEISDDDESEPEVAVGGK-KKGGRKPATAKAAPAAAKQPPKKRGPANKQAVGIGQKLI 1369

Query: 529  TDSFKASEPTE-TSPDMKVRRMRPSPFNKKSGSVLDKLASSSATAGEDSAENVDISSLVL 353
            T   K +E T+ +SP+ KVR+MR SPFN+KSG+VL K   S+    ED++    + SL  
Sbjct: 1370 TSILKPAENTDNSSPEKKVRKMRASPFNEKSGAVLGKNKGSTLQENEDASPVSSLGSLE- 1428

Query: 352  DSIDEEPKDIXXXXXXXXXRKQTTY 278
               DE  + +          K+TTY
Sbjct: 1429 ---DEVNEAVVAPKARVTRGKKTTY 1450


>ref|XP_002298421.2| DNA topoisomerase family protein [Populus trichocarpa]
            gi|550348289|gb|EEE83226.2| DNA topoisomerase family
            protein [Populus trichocarpa]
          Length = 1485

 Score =  251 bits (640), Expect = 1e-63
 Identities = 131/254 (51%), Positives = 174/254 (68%), Gaps = 4/254 (1%)
 Frame = -1

Query: 1836 LRITELPIRKWTQDYKEFLGSLSPSSNDKS----KEAFIKDFHDHSTDDTACFEVILSKR 1669
            LRITELPIR+WT DYK FL S++  + D++    K+ FIKDF  +  D T  FEV+LS+ 
Sbjct: 922  LRITELPIRRWTDDYKAFLNSVTEGNRDENGNLPKDPFIKDFRKYGDDATVVFEVLLSEE 981

Query: 1668 NYNVAKQEGLMKKFKLTTNLSTSNMHLFDKDNKIVRYESPEEILEKFFHLRLVYYTKRKE 1489
            N  +AKQEGL+KKFKLTT +STSNMHLFD    I +Y++PE+ILE+FFHLRL YY +RK+
Sbjct: 982  NMMIAKQEGLLKKFKLTTTISTSNMHLFDSAGVIKKYDNPEQILEEFFHLRLEYYERRKK 1041

Query: 1488 RYLEIYQSELVKLDNQVRFILGVVEGEIVVSKRKKAELVNELRDKGFTPIPXXXXXXXXX 1309
              LE  + EL+KL+N+VRFILGVV GEI+V+ RK+A+L  EL  KGFTPIP         
Sbjct: 1042 VLLENLEFELLKLENKVRFILGVVRGEIIVNNRKRADLFLELHQKGFTPIP-----KKSK 1096

Query: 1308 XXXXXXXXXXXDTNENPASNAPLLSDYDYLLSMAIGSLTYEKVKELCDNRDKVLDQIEQL 1129
                       +  ++   +    SDYDYLLSMAIG+LT EKV++LC + DK+  +++ L
Sbjct: 1097 AVVAGATDDKDEAEDSLEVSGVRASDYDYLLSMAIGTLTLEKVQQLCADHDKLNGEVDNL 1156

Query: 1128 KKETEQSLWARDLD 1087
            +K T   LW +DL+
Sbjct: 1157 RKTTPIVLWVKDLE 1170



 Score =  100 bits (248), Expect = 3e-18
 Identities = 69/173 (39%), Positives = 96/173 (55%), Gaps = 24/173 (13%)
 Frame = -3

Query: 814  DEDIPDLRQRLAAYHLDSSPDKS-EMETDAPKVDAKKPSIAXXXXXXXXXXEGSFEPEP- 641
            D++I  L+ RL AY LDSSP++S +MET+  +V A + + A              E EP 
Sbjct: 1273 DDEIESLKDRLKAYRLDSSPEQSADMETEVLRVPAGRKA-ARKKPLAAVSVISDSEDEPD 1331

Query: 640  --------------TKKGRGRQASR---KPPNPSAATKKRGPAAKKSQA-GQKLITDSFK 515
                          TKK  GR+A+    K   P AATK+RGPA+K+SQ  GQ+L+T+  K
Sbjct: 1332 LDDDFDVQVKAVPETKKKGGRKAAAANDKAAKPPAATKRRGPASKQSQGLGQQLLTEMLK 1391

Query: 514  ASEPTETSPDMKVRRMRPSPFNKKSGSVLDKLASSSATAGE----DSAENVDI 368
             +E +  SP+ KVR+MR SPFNKKSGS+L  +     T  E     ++EN D+
Sbjct: 1392 PAEESGISPEKKVRKMRASPFNKKSGSLLGGIHKGDDTGIETMPASTSENADV 1444


>gb|EMJ21781.1| hypothetical protein PRUPE_ppa000202mg [Prunus persica]
          Length = 1471

 Score =  250 bits (638), Expect = 2e-63
 Identities = 130/251 (51%), Positives = 174/251 (69%), Gaps = 1/251 (0%)
 Frame = -1

Query: 1836 LRITELPIRKWTQDYKEFLGSLSPSSNDKSKEAFIKDFHDHSTDDTACFEVILSKRNYNV 1657
            +RI+ELPIR+WTQDYKEFL S+S   NDK+K+ FI+ F  HS   T    V L + N   
Sbjct: 910  VRISELPIRRWTQDYKEFLESIS-QGNDKAKDPFIEGFTQHSDHSTVDIIVHLPEENLMA 968

Query: 1656 AKQEGLMKKFKLTTNLSTSNMHLFDKDNKIVRYESPEEILEKFFHLRLVYYTKRKERYLE 1477
            A+QEGL+KKFKLTT++STSNMHLFD    I +Y++PE+ILE+FFHLRL +Y KRK+  L+
Sbjct: 969  ARQEGLLKKFKLTTSISTSNMHLFDPKGVIKKYDTPEQILEEFFHLRLEFYEKRKKVLLD 1028

Query: 1476 IYQSELVKLDNQVRFILGVVEGEIVVSKRKKAELVNELRDKGFTPIPXXXXXXXXXXXXX 1297
              + EL+KL+N+VRFIL VV GEI+VS R++A+L  EL+ KGFTP P             
Sbjct: 1029 NLEMELLKLENKVRFILAVVNGEIIVSNRRRADLFLELQQKGFTPFPKKTKAQEPEVAGA 1088

Query: 1296 XXXXXXXDTNENPAS-NAPLLSDYDYLLSMAIGSLTYEKVKELCDNRDKVLDQIEQLKKE 1120
                   + N   AS N   +SDY+YL+SMAIG+LT E+V+ LC +RDKV +++ +L+  
Sbjct: 1089 IEDTEETEENSESASGNGARISDYEYLISMAIGTLTIERVQALCADRDKVNNEVAELRNS 1148

Query: 1119 TEQSLWARDLD 1087
            T +SLW +DLD
Sbjct: 1149 TPRSLWLKDLD 1159



 Score = 97.4 bits (241), Expect = 2e-17
 Identities = 68/162 (41%), Positives = 88/162 (54%), Gaps = 11/162 (6%)
 Frame = -3

Query: 814  DEDIPDLRQRLAAYHLDSSPDKSE-METDAPK--VDAKKPSIAXXXXXXXXXXEGSFEPE 644
            D+++ +L+ RLAAY+LDSSP+ S   ET+ P+  V  K+PS            E      
Sbjct: 1264 DDEVLELKDRLAAYNLDSSPENSAGKETEVPQEPVQRKEPSKRAMQIDDDEDFEVEIAAA 1323

Query: 643  PT---KKGRGRQASRKPPNPSAATKKRGPAAKK-----SQAGQKLITDSFKASEPTETSP 488
            P    K GR    + K   P AA KKRG AA K     S +GQKL+TD  K  E +  SP
Sbjct: 1324 PAAGKKGGRKAAGTTKASKPPAAAKKRGAAANKQSQASSSSGQKLLTDMLKPVETSGVSP 1383

Query: 487  DMKVRRMRPSPFNKKSGSVLDKLASSSATAGEDSAENVDISS 362
            + KVR+MR SPFNKKS SV+ K++     A  +S E VD  S
Sbjct: 1384 EPKVRKMRASPFNKKSSSVMGKVSLEVEMA--ESEEKVDTPS 1423


>ref|XP_004953539.1| PREDICTED: DNA topoisomerase 2-like [Setaria italica]
          Length = 1480

 Score =  249 bits (635), Expect = 4e-63
 Identities = 129/250 (51%), Positives = 174/250 (69%)
 Frame = -1

Query: 1836 LRITELPIRKWTQDYKEFLGSLSPSSNDKSKEAFIKDFHDHSTDDTACFEVILSKRNYNV 1657
            LRITELP+R+WTQDYK+F+ SL P   +K KEAFI+D      +D   FE+ LS++N N+
Sbjct: 903  LRITELPVRRWTQDYKDFIDSLRPDEKNKDKEAFIEDCTAQGDNDDVYFELKLSEKNMNI 962

Query: 1656 AKQEGLMKKFKLTTNLSTSNMHLFDKDNKIVRYESPEEILEKFFHLRLVYYTKRKERYLE 1477
            AK+EGL+KKFKLTT + T+NMHLFD D KI +Y++PE+ILE+FF LRL +Y KRKE  L+
Sbjct: 963  AKEEGLLKKFKLTTTIGTTNMHLFDSDGKIRKYDTPEQILEEFFKLRLQFYFKRKEVLLQ 1022

Query: 1476 IYQSELVKLDNQVRFILGVVEGEIVVSKRKKAELVNELRDKGFTPIPXXXXXXXXXXXXX 1297
              + +L KL+N+ RFI  VV  EIVV+ RK+A+L  ELR K F P P             
Sbjct: 1023 NMKLDLKKLENKARFIRCVVNNEIVVNNRKRADLFLELRQKNFDPFPKKKKRAEPAAVGA 1082

Query: 1296 XXXXXXXDTNENPASNAPLLSDYDYLLSMAIGSLTYEKVKELCDNRDKVLDQIEQLKKET 1117
                   ++ E  A+N    SDY+YLLSMAIG+LT EK++EL   ++KV++++E+L+K T
Sbjct: 1083 TEEEENEESPE--AANGVDPSDYEYLLSMAIGTLTLEKIQELNAEKEKVVNEVEELEKTT 1140

Query: 1116 EQSLWARDLD 1087
            E+SLW RDLD
Sbjct: 1141 EKSLWLRDLD 1150



 Score = 82.8 bits (203), Expect = 5e-13
 Identities = 60/166 (36%), Positives = 90/166 (54%), Gaps = 21/166 (12%)
 Frame = -3

Query: 814  DEDIPDLRQRLAAYHL-DSSPDKSEMETDAPKVD--------------AKKPS--IAXXX 686
            ++D+P L++RLAA++L DSSPD S MET+  +                 KK S  +A   
Sbjct: 1264 EDDLPTLKERLAAFNLNDSSPDNSAMETETTEEQIGGKGKKGVSKRGGGKKASSSLAVIH 1323

Query: 685  XXXXXXXEGSFE-PEPT---KKGRGRQASRKPPNPSAATKKRGPAAKKSQAGQKLITDSF 518
                   + S E PE     KKGRGR+ +      + AT+KR PA      G+ ++    
Sbjct: 1324 DDEDEDVDVSLEVPEEVQGPKKGRGRKPAAPVKPKATATRKRAPAQ-----GKAMMLKPT 1378

Query: 517  KASEPTETSPDMKVRRMRPSPFNKKSGSVLDKLASSSATAGEDSAE 380
            + S  +  SP+ KVR+MR SPFNKKSGS+L + + +++T+ E +AE
Sbjct: 1379 EDSNTSAPSPEKKVRKMRESPFNKKSGSILQRGSIAASTSSESTAE 1424


>gb|EXB68160.1| DNA topoisomerase 2 [Morus notabilis]
          Length = 1451

 Score =  248 bits (634), Expect = 5e-63
 Identities = 131/252 (51%), Positives = 173/252 (68%), Gaps = 2/252 (0%)
 Frame = -1

Query: 1836 LRITELPIRKWTQDYKEFLGSLSPSSNDKSKEAFIKDFHDHSTDDTACFEVILSKRNYNV 1657
            +RITELPIR+WTQDYKEFL S+    NDK+K+ FI+DF  HS   T    V L++     
Sbjct: 870  VRITELPIRRWTQDYKEFLDSIC-YGNDKAKDPFIEDFTQHSDHSTVDILVHLAEETLIA 928

Query: 1656 AKQEGLMKKFKLTTNLSTSNMHLFDKDNKIVRYESPEEILEKFFHLRLVYYTKRKERYLE 1477
             KQEGL+KK KLTT++ST+NMHLFD +  I +Y++PE+ILE+F+HLRL +Y KRK+  L+
Sbjct: 929  VKQEGLLKKLKLTTSISTANMHLFDANGVIKKYDTPEQILEEFYHLRLEFYEKRKKALLD 988

Query: 1476 IYQSELVKLDNQVRFILGVVEGEIVVSKRKKAELVNELRDKGFTPIPXXXXXXXXXXXXX 1297
              + EL+KL N+VRFILGVV GEIVVS RK+A+L  EL+ KGFTP P             
Sbjct: 989  NLELELLKLANKVRFILGVVTGEIVVSNRKRADLFVELQRKGFTPFPKKTKAVEPEVAGV 1048

Query: 1296 XXXXXXXDTNEN--PASNAPLLSDYDYLLSMAIGSLTYEKVKELCDNRDKVLDQIEQLKK 1123
                   + N N    S    +SDY+YLLSMAIG+LT EKV+ LC  +DK+ +++E+L+K
Sbjct: 1049 TEDAEDTEENSNAEAISTEARISDYEYLLSMAIGTLTLEKVQALCGEKDKLNNEVEELRK 1108

Query: 1122 ETEQSLWARDLD 1087
             T +SLW +DLD
Sbjct: 1109 ATPKSLWVKDLD 1120



 Score = 95.1 bits (235), Expect = 9e-17
 Identities = 74/195 (37%), Positives = 102/195 (52%), Gaps = 34/195 (17%)
 Frame = -3

Query: 814  DEDIPDLRQRLAAYHLDSSPDKS-EMETDAPKVD-----------AKKPSIAXXXXXXXX 671
            D+++  L+ RLAAY+LDSSPDKS EM+T+AP+V            A+K ++A        
Sbjct: 1220 DDEVLALKDRLAAYNLDSSPDKSSEMDTEAPQVPVPKKAPTKRAAAQKKTLATVSETVNL 1279

Query: 670  XXEGS--------FEPEPTK--KGRGRQASRKPP---------NPSAATKKRGPAAKKSQ 548
              +          FE E T   K   ++  +KP            +AATK+RG A K+ Q
Sbjct: 1280 DDDDDDEIDGDEDFELESTAPAKAAAKKGGKKPAVSTKAVSKAPAAAATKRRGAANKEPQ 1339

Query: 547  A-GQKLITDSFKASEPTETSPDMKVRRMRPSPFNKKSGSVLDKLAS--SSATAGEDSAEN 377
              GQKL+TD  K +E +  SP+ KVR+MR SPFNKKSGSVL +  +      A   S EN
Sbjct: 1340 VLGQKLLTDMLKPAENSGLSPEKKVRKMRASPFNKKSGSVLGRAVNIDDDDEATTASQEN 1399

Query: 376  VDISSLVLDSIDEEP 332
               +S  +D + E P
Sbjct: 1400 SPSTSESVDDVVEVP 1414


>emb|CAJ44361.1| putative DNA topoisomerase II [Malus domestica]
          Length = 1467

 Score =  247 bits (631), Expect = 1e-62
 Identities = 131/251 (52%), Positives = 171/251 (68%), Gaps = 1/251 (0%)
 Frame = -1

Query: 1836 LRITELPIRKWTQDYKEFLGSLSPSSNDKSKEAFIKDFHDHSTDDTACFEVILSKRNYNV 1657
            LRI+ELPIR+WTQDYKEFL S+S   NDK+K+ FI+ F  HS   T    V L +     
Sbjct: 874  LRISELPIRRWTQDYKEFLESIS-EGNDKAKDPFIEGFTQHSDHSTVDIIVHLREEKLMA 932

Query: 1656 AKQEGLMKKFKLTTNLSTSNMHLFDKDNKIVRYESPEEILEKFFHLRLVYYTKRKERYLE 1477
            AKQEGL+KKFKLTT++STSNMHLFD+   I +Y++PE+ILE FFHLRL +Y KRK+  LE
Sbjct: 933  AKQEGLLKKFKLTTSISTSNMHLFDRKGVIKKYDTPEQILEDFFHLRLEFYEKRKKVLLE 992

Query: 1476 IYQSELVKLDNQVRFILGVVEGEIVVSKRKKAELVNELRDKGFTPIPXXXXXXXXXXXXX 1297
              + EL+KL+N+VRFILGVV GEI+VS RK+A+L  EL+ KGFTP P             
Sbjct: 993  DLELELLKLENKVRFILGVVNGEIIVSNRKRADLFLELQQKGFTPFPKKTKALEPEVAGA 1052

Query: 1296 XXXXXXXDTNENPA-SNAPLLSDYDYLLSMAIGSLTYEKVKELCDNRDKVLDQIEQLKKE 1120
                   + N   A      +SDY+YL+SMAIG+LT E+V+ L  +RDK   ++++L+K 
Sbjct: 1053 TENTEDAEENSEAAIEKGARISDYEYLISMAIGTLTIERVQALLADRDKANAEVDELRKS 1112

Query: 1119 TEQSLWARDLD 1087
            T +SLW +DLD
Sbjct: 1113 TPRSLWLKDLD 1123



 Score = 94.7 bits (234), Expect = 1e-16
 Identities = 61/155 (39%), Positives = 91/155 (58%), Gaps = 9/155 (5%)
 Frame = -3

Query: 814  DEDIPDLRQRLAAYHLDSSPDKSE-METDAPKVDAKKPSIAXXXXXXXXXXEGSFEPEPT 638
            D+++ +L++RLAAY+LDSSP+ S   +    K +A K  +           E +  P+  
Sbjct: 1264 DDEVLELKERLAAYNLDSSPENSAGNDKVVQKKEANKKVVMQMDSDDDFEEEIAAAPKGG 1323

Query: 637  KK---GRGRQASRKPPNPSAATKKRGPAAKKSQ----AGQKLITDSFKASEPTETSPDMK 479
            +K   G+ + A+ KPP   AA KKRG AA K Q    +GQKL+TD  K +E +  SP+ K
Sbjct: 1324 RKKAAGKPKVAASKPP---AAAKKRGTAANKKQPQTSSGQKLLTDMLKPAESSRASPEPK 1380

Query: 478  VRRMRPSPFNKKSGSVLDKLA-SSSATAGEDSAEN 377
            VR+MR SPFNKKSGSV+ ++  +   T  +D  ++
Sbjct: 1381 VRKMRASPFNKKSGSVMGRVGLADEMTESDDKVDS 1415


>ref|XP_006482851.1| PREDICTED: DNA topoisomerase 2-like [Citrus sinensis]
          Length = 1456

 Score =  246 bits (628), Expect = 3e-62
 Identities = 138/281 (49%), Positives = 180/281 (64%), Gaps = 1/281 (0%)
 Frame = -1

Query: 1926 KTARKDTGVTYXXXXXXXXXXXXXXXXXXTLRITELPIRKWTQDYKEFLGSLSPSSNDKS 1747
            KTA K+ GVTY                   LRI ELPIR+WTQDY+EFL S+   +    
Sbjct: 880  KTASKEAGVTYTVTGIIEEVNETT------LRIKELPIRRWTQDYREFLESIIDQN---- 929

Query: 1746 KEAFIKDFHDHSTDDTACFEVILSKRNYNVAKQEGLMKKFKLTTNLSTSNMHLFDKDNKI 1567
             ++FI+ F  +S D T  FEV LS+ +    KQEGL+KKFKLTT +STSNMHLFD    I
Sbjct: 930  -DSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 988

Query: 1566 VRYESPEEILEKFFHLRLVYYTKRKERYLEIYQSELVKLDNQVRFILGVVEGEIVVSKRK 1387
             +Y++PE+ILE+FFH+RL +Y KRK+  LE  + EL+KL+N+VRFILGVV GEIVV+ RK
Sbjct: 989  KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1048

Query: 1386 KAELVNELRDKGFTPIPXXXXXXXXXXXXXXXXXXXXDTNENP-ASNAPLLSDYDYLLSM 1210
            + +L+ ELR KGFTP P                    ++ ENP   N     DYDYLLSM
Sbjct: 1049 RTDLLLELRQKGFTPFP--KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSM 1106

Query: 1209 AIGSLTYEKVKELCDNRDKVLDQIEQLKKETEQSLWARDLD 1087
            AIG+LT EKV+ L  +RDK+ ++++ L+K T +SLW +DLD
Sbjct: 1107 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLD 1147



 Score = 90.1 bits (222), Expect = 3e-15
 Identities = 68/184 (36%), Positives = 103/184 (55%), Gaps = 31/184 (16%)
 Frame = -3

Query: 814  DEDIPDLRQRLAAYH-------LDSSPDKSE-METDAPKVDAKK--PS------------ 701
            ++++PDL+QRLA  +       L+ SPD+S  MET+  +V AKK  PS            
Sbjct: 1238 EDEVPDLKQRLAKLNEQLASTKLEPSPDQSGVMETEKVQVPAKKKEPSKRTAAQKKAVTV 1297

Query: 700  -IAXXXXXXXXXXEGSFE---PEPTKKGRGRQAS--RKPPNPSAATKKRGPAAKK---SQ 548
              +          + +FE   PE  KKG GR+A+   K   P+A TKKRGPA K+   + 
Sbjct: 1298 ETSDSEDEIIIDDDEAFEIAAPEAGKKG-GRKAAGNTKAAKPAAETKKRGPAKKQQPEAS 1356

Query: 547  AGQKLITDSFKASEPTETSPDMKVRRMRPSPFNKKSGSVLDKLASSSATAGEDSAENVDI 368
             GQ+L+T+  K   PTE+SP+ KVR+MR SPFNKKSGS+L +  +    +G   + + ++
Sbjct: 1357 LGQRLLTEMLK---PTESSPEKKVRKMRASPFNKKSGSMLGRAGTIEEPSGSSPSTSEEV 1413

Query: 367  SSLV 356
            + ++
Sbjct: 1414 AEVL 1417


>ref|XP_006439079.1| hypothetical protein CICLE_v10030505mg [Citrus clementina]
            gi|557541275|gb|ESR52319.1| hypothetical protein
            CICLE_v10030505mg [Citrus clementina]
          Length = 1456

 Score =  246 bits (628), Expect = 3e-62
 Identities = 138/281 (49%), Positives = 180/281 (64%), Gaps = 1/281 (0%)
 Frame = -1

Query: 1926 KTARKDTGVTYXXXXXXXXXXXXXXXXXXTLRITELPIRKWTQDYKEFLGSLSPSSNDKS 1747
            KTA K+ GVTY                   LRI ELPIR+WTQDY+EFL S+   +    
Sbjct: 880  KTASKEAGVTYTVTGIIEEVNETT------LRIKELPIRRWTQDYREFLESIIDQN---- 929

Query: 1746 KEAFIKDFHDHSTDDTACFEVILSKRNYNVAKQEGLMKKFKLTTNLSTSNMHLFDKDNKI 1567
             ++FI+ F  +S D T  FEV LS+ +    KQEGL+KKFKLTT +STSNMHLFD    I
Sbjct: 930  -DSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 988

Query: 1566 VRYESPEEILEKFFHLRLVYYTKRKERYLEIYQSELVKLDNQVRFILGVVEGEIVVSKRK 1387
             +Y++PE+ILE+FFH+RL +Y KRK+  LE  + EL+KL+N+VRFILGVV GEIVV+ RK
Sbjct: 989  KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1048

Query: 1386 KAELVNELRDKGFTPIPXXXXXXXXXXXXXXXXXXXXDTNENP-ASNAPLLSDYDYLLSM 1210
            + +L+ ELR KGFTP P                    ++ ENP   N     DYDYLLSM
Sbjct: 1049 RTDLLLELRQKGFTPFP--KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSM 1106

Query: 1209 AIGSLTYEKVKELCDNRDKVLDQIEQLKKETEQSLWARDLD 1087
            AIG+LT EKV+ L  +RDK+ ++++ L+K T +SLW +DLD
Sbjct: 1107 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLD 1147



 Score = 88.6 bits (218), Expect = 9e-15
 Identities = 67/184 (36%), Positives = 102/184 (55%), Gaps = 31/184 (16%)
 Frame = -3

Query: 814  DEDIPDLRQRLAAYH-------LDSSPDKSE-METDAPKVDAKK--PS------------ 701
            ++++PDL+QRLA  +       L+ SPD+S  MET+  +V AKK  PS            
Sbjct: 1238 EDEVPDLKQRLAKLNEQLASTKLEPSPDQSGVMETEKVQVPAKKKEPSKRTAAQKKAVTV 1297

Query: 700  -IAXXXXXXXXXXEGSFE---PEPTKKGRGRQAS--RKPPNPSAATKKRGPAAKK---SQ 548
              +          + +FE   PE  KKG GR+A+   K   P+  TKKRGPA K+   + 
Sbjct: 1298 ETSDSEDEIIIDDDEAFEIAAPEAGKKG-GRKAAGNTKAAKPAVETKKRGPAKKQQPEAS 1356

Query: 547  AGQKLITDSFKASEPTETSPDMKVRRMRPSPFNKKSGSVLDKLASSSATAGEDSAENVDI 368
             GQ+L+T+  K   PTE+SP+ KVR+MR SPFNKKSGS+L +  +    +G   + + ++
Sbjct: 1357 LGQRLLTEMLK---PTESSPEKKVRKMRASPFNKKSGSMLGRAGTIEEPSGSSPSTSEEV 1413

Query: 367  SSLV 356
            + ++
Sbjct: 1414 AEVL 1417


>ref|XP_006439078.1| hypothetical protein CICLE_v10030505mg [Citrus clementina]
            gi|557541274|gb|ESR52318.1| hypothetical protein
            CICLE_v10030505mg [Citrus clementina]
          Length = 1455

 Score =  246 bits (628), Expect = 3e-62
 Identities = 138/281 (49%), Positives = 180/281 (64%), Gaps = 1/281 (0%)
 Frame = -1

Query: 1926 KTARKDTGVTYXXXXXXXXXXXXXXXXXXTLRITELPIRKWTQDYKEFLGSLSPSSNDKS 1747
            KTA K+ GVTY                   LRI ELPIR+WTQDY+EFL S+   +    
Sbjct: 880  KTASKEAGVTYTVTGIIEEVNETT------LRIKELPIRRWTQDYREFLESIIDQN---- 929

Query: 1746 KEAFIKDFHDHSTDDTACFEVILSKRNYNVAKQEGLMKKFKLTTNLSTSNMHLFDKDNKI 1567
             ++FI+ F  +S D T  FEV LS+ +    KQEGL+KKFKLTT +STSNMHLFD    I
Sbjct: 930  -DSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 988

Query: 1566 VRYESPEEILEKFFHLRLVYYTKRKERYLEIYQSELVKLDNQVRFILGVVEGEIVVSKRK 1387
             +Y++PE+ILE+FFH+RL +Y KRK+  LE  + EL+KL+N+VRFILGVV GEIVV+ RK
Sbjct: 989  KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1048

Query: 1386 KAELVNELRDKGFTPIPXXXXXXXXXXXXXXXXXXXXDTNENP-ASNAPLLSDYDYLLSM 1210
            + +L+ ELR KGFTP P                    ++ ENP   N     DYDYLLSM
Sbjct: 1049 RTDLLLELRQKGFTPFP--KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSM 1106

Query: 1209 AIGSLTYEKVKELCDNRDKVLDQIEQLKKETEQSLWARDLD 1087
            AIG+LT EKV+ L  +RDK+ ++++ L+K T +SLW +DLD
Sbjct: 1107 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLD 1147



 Score = 88.6 bits (218), Expect = 9e-15
 Identities = 67/184 (36%), Positives = 102/184 (55%), Gaps = 31/184 (16%)
 Frame = -3

Query: 814  DEDIPDLRQRLAAYH-------LDSSPDKSE-METDAPKVDAKK--PS------------ 701
            ++++PDL+QRLA  +       L+ SPD+S  MET+  +V AKK  PS            
Sbjct: 1237 EDEVPDLKQRLAKLNEQLASTKLEPSPDQSGVMETEKVQVPAKKKEPSKRTAAQKKAVTV 1296

Query: 700  -IAXXXXXXXXXXEGSFE---PEPTKKGRGRQAS--RKPPNPSAATKKRGPAAKK---SQ 548
              +          + +FE   PE  KKG GR+A+   K   P+  TKKRGPA K+   + 
Sbjct: 1297 ETSDSEDEIIIDDDEAFEIAAPEAGKKG-GRKAAGNTKAAKPAVETKKRGPAKKQQPEAS 1355

Query: 547  AGQKLITDSFKASEPTETSPDMKVRRMRPSPFNKKSGSVLDKLASSSATAGEDSAENVDI 368
             GQ+L+T+  K   PTE+SP+ KVR+MR SPFNKKSGS+L +  +    +G   + + ++
Sbjct: 1356 LGQRLLTEMLK---PTESSPEKKVRKMRASPFNKKSGSMLGRAGTIEEPSGSSPSTSEEV 1412

Query: 367  SSLV 356
            + ++
Sbjct: 1413 AEVL 1416


>ref|XP_002972906.1| hypothetical protein SELMODRAFT_98330 [Selaginella moellendorffii]
            gi|300159507|gb|EFJ26127.1| hypothetical protein
            SELMODRAFT_98330 [Selaginella moellendorffii]
          Length = 1151

 Score =  246 bits (628), Expect = 3e-62
 Identities = 136/280 (48%), Positives = 178/280 (63%)
 Frame = -1

Query: 1926 KTARKDTGVTYXXXXXXXXXXXXXXXXXXTLRITELPIRKWTQDYKEFLGSLSPSSNDKS 1747
            K+A K++GV+Y                   +R+ ELPIRKWTQDYKEFL +L     +K 
Sbjct: 872  KSASKESGVSYTVTGIVEQVNETT------IRVLELPIRKWTQDYKEFLEALL-CGTEKI 924

Query: 1746 KEAFIKDFHDHSTDDTACFEVILSKRNYNVAKQEGLMKKFKLTTNLSTSNMHLFDKDNKI 1567
            KE  IKD+ +H+TD    FE+ LS+     A  EGL KKFKL+T +STSNM+LFDKD  I
Sbjct: 925  KEPSIKDYREHNTDTRVHFEISLSEEKMAEALAEGLTKKFKLSTTISTSNMNLFDKDGHI 984

Query: 1566 VRYESPEEILEKFFHLRLVYYTKRKERYLEIYQSELVKLDNQVRFILGVVEGEIVVSKRK 1387
             +Y++PE+ILE F+H+RL  Y KRKE  +E  Q EL+KLDN+VRFILGVV+GEIVV+ RK
Sbjct: 985  RKYDTPEQILEDFYHIRLELYVKRKEVQVENLQYELLKLDNKVRFILGVVKGEIVVNNRK 1044

Query: 1386 KAELVNELRDKGFTPIPXXXXXXXXXXXXXXXXXXXXDTNENPASNAPLLSDYDYLLSMA 1207
            +AEL+ EL+ KGFTP P                      +E   +      DY+YLLSM 
Sbjct: 1045 RAELLVELKTKGFTPFP-KKAKASDLPVVGGDGSDVEADDEEKLNKGVRAGDYEYLLSMP 1103

Query: 1206 IGSLTYEKVKELCDNRDKVLDQIEQLKKETEQSLWARDLD 1087
            IG+LT EKV++LC+ RDK+   +E+LKK T + LW +DLD
Sbjct: 1104 IGTLTLEKVQQLCNERDKLEGDVEELKKCTPKDLWEKDLD 1143


>ref|XP_002988023.1| hypothetical protein SELMODRAFT_127267 [Selaginella moellendorffii]
            gi|300144129|gb|EFJ10815.1| hypothetical protein
            SELMODRAFT_127267 [Selaginella moellendorffii]
          Length = 1151

 Score =  246 bits (628), Expect = 3e-62
 Identities = 136/280 (48%), Positives = 178/280 (63%)
 Frame = -1

Query: 1926 KTARKDTGVTYXXXXXXXXXXXXXXXXXXTLRITELPIRKWTQDYKEFLGSLSPSSNDKS 1747
            K+A K++GV+Y                   +R+ ELPIRKWTQDYKEFL +L     +K 
Sbjct: 872  KSATKESGVSYTVTGIVEQVNETT------IRVLELPIRKWTQDYKEFLEALL-CGTEKI 924

Query: 1746 KEAFIKDFHDHSTDDTACFEVILSKRNYNVAKQEGLMKKFKLTTNLSTSNMHLFDKDNKI 1567
            KE  IKD+ +H+TD    FE+ LS+     A  EGL KKFKL+T +STSNM+LFDKD  I
Sbjct: 925  KEPSIKDYREHNTDTRVHFEISLSEEKMAEALAEGLTKKFKLSTTISTSNMNLFDKDGHI 984

Query: 1566 VRYESPEEILEKFFHLRLVYYTKRKERYLEIYQSELVKLDNQVRFILGVVEGEIVVSKRK 1387
             +Y++PE+ILE F+H+RL  Y KRKE  +E  Q EL+KLDN+VRFILGVV+GEIVV+ RK
Sbjct: 985  RKYDTPEQILEDFYHIRLELYVKRKEVQVENLQYELLKLDNKVRFILGVVKGEIVVNNRK 1044

Query: 1386 KAELVNELRDKGFTPIPXXXXXXXXXXXXXXXXXXXXDTNENPASNAPLLSDYDYLLSMA 1207
            +AEL+ EL+ KGFTP P                      +E   +      DY+YLLSM 
Sbjct: 1045 RAELLVELKTKGFTPFP-KKAKASDLPVVGGDGSDVEADDEEKLNKGVRAGDYEYLLSMP 1103

Query: 1206 IGSLTYEKVKELCDNRDKVLDQIEQLKKETEQSLWARDLD 1087
            IG+LT EKV++LC+ RDK+   +E+LKK T + LW +DLD
Sbjct: 1104 IGTLTLEKVQQLCNERDKLEGDVEELKKCTPKDLWEKDLD 1143


>ref|XP_002994651.1| hypothetical protein SELMODRAFT_138946 [Selaginella moellendorffii]
            gi|300137231|gb|EFJ04283.1| hypothetical protein
            SELMODRAFT_138946 [Selaginella moellendorffii]
          Length = 980

 Score =  246 bits (628), Expect = 3e-62
 Identities = 136/280 (48%), Positives = 178/280 (63%)
 Frame = -1

Query: 1926 KTARKDTGVTYXXXXXXXXXXXXXXXXXXTLRITELPIRKWTQDYKEFLGSLSPSSNDKS 1747
            K+A K++GV+Y                   +R+ ELPIRKWTQDYKEFL +L     +K 
Sbjct: 701  KSASKESGVSYTVTGIVEQVNETT------IRVLELPIRKWTQDYKEFLEALL-CGTEKI 753

Query: 1746 KEAFIKDFHDHSTDDTACFEVILSKRNYNVAKQEGLMKKFKLTTNLSTSNMHLFDKDNKI 1567
            KE  IKD+ +H+TD    FE+ LS+     A  EGL KKFKL+T +STSNM+LFDKD  I
Sbjct: 754  KEPSIKDYREHNTDTRVHFEISLSEEKMAEALAEGLTKKFKLSTTISTSNMNLFDKDGHI 813

Query: 1566 VRYESPEEILEKFFHLRLVYYTKRKERYLEIYQSELVKLDNQVRFILGVVEGEIVVSKRK 1387
             +Y++PE+ILE F+H+RL  Y KRKE  +E  Q EL+KLDN+VRFILGVV+GEIVV+ RK
Sbjct: 814  RKYDTPEQILEDFYHIRLELYVKRKEVQVENLQYELLKLDNKVRFILGVVKGEIVVNNRK 873

Query: 1386 KAELVNELRDKGFTPIPXXXXXXXXXXXXXXXXXXXXDTNENPASNAPLLSDYDYLLSMA 1207
            +AEL+ EL+ KGFTP P                      +E   +      DY+YLLSM 
Sbjct: 874  RAELLVELKTKGFTPFP-KKAKASDLPVVGGDGSDVEADDEEKLNKGVRAGDYEYLLSMP 932

Query: 1206 IGSLTYEKVKELCDNRDKVLDQIEQLKKETEQSLWARDLD 1087
            IG+LT EKV++LC+ RDK+   +E+LKK T + LW +DLD
Sbjct: 933  IGTLTLEKVQQLCNERDKLEGDVEELKKCTPKDLWEKDLD 972