BLASTX nr result
ID: Achyranthes23_contig00010410
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00010410
(1570 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY11664.1| Tetratricopeptide repeat (TPR)-like superfamily p... 383 e-103
gb|EOY11663.1| Tetratricopeptide repeat (TPR)-like superfamily p... 383 e-103
gb|EOY11661.1| Tetratricopeptide repeat (TPR)-like superfamily p... 383 e-103
gb|EOY11660.1| Tetratricopeptide repeat-like superfamily protein... 376 e-101
gb|EMJ06489.1| hypothetical protein PRUPE_ppa006661mg [Prunus pe... 373 e-100
ref|XP_002330255.1| predicted protein [Populus trichocarpa] 369 2e-99
ref|XP_002277910.2| PREDICTED: RNA polymerase II-associated prot... 365 3e-98
emb|CBI39598.3| unnamed protein product [Vitis vinifera] 365 3e-98
ref|XP_004302236.1| PREDICTED: RNA polymerase II-associated prot... 364 6e-98
ref|XP_006472205.1| PREDICTED: RNA polymerase II-associated prot... 363 1e-97
gb|EOY11662.1| Tetratricopeptide repeat-like superfamily protein... 358 4e-96
ref|XP_006433540.1| hypothetical protein CICLE_v10003914mg [Citr... 354 7e-95
gb|EXB53029.1| RNA polymerase II-associated protein 3 [Morus not... 351 4e-94
ref|XP_006392426.1| hypothetical protein EUTSA_v10023436mg [Eutr... 348 5e-93
ref|XP_004248819.1| PREDICTED: RNA polymerase II-associated prot... 343 9e-92
ref|XP_006339932.1| PREDICTED: RNA polymerase II-associated prot... 341 4e-91
ref|NP_176039.2| carboxylate clamp-tetratricopeptide repeat prot... 340 8e-91
ref|XP_006302207.1| hypothetical protein CARUB_v10020218mg [Caps... 339 2e-90
ref|XP_006302206.1| hypothetical protein CARUB_v10020218mg [Caps... 339 2e-90
ref|XP_006339933.1| PREDICTED: RNA polymerase II-associated prot... 338 3e-90
>gb|EOY11664.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
isoform 5 [Theobroma cacao]
Length = 389
Score = 383 bits (983), Expect = e-103
Identities = 204/391 (52%), Positives = 267/391 (68%), Gaps = 2/391 (0%)
Frame = -2
Query: 1569 GKSKVTYLSNNTSELRPSV-NYDQLSHMSSSFMPNDNIVDAASEKDQGNEYFKKKKFNEA 1393
GKS + S +S + NYD+ + +SSSF+ +N+ DAASEK+ GNEYFK+KKF EA
Sbjct: 21 GKSSLIDSSTTSSRQYDYLQNYDKFNSLSSSFVTEENMPDAASEKELGNEYFKQKKFKEA 80
Query: 1392 IDCYSRSIALSPTAVAYANRAMAYLKIRRYKEAEDDCTEALNLDDRYIKAYSRRATARKE 1213
IDCYSRSI LSPTAVA+ANRAMAYLKI++++EAEDDCTEALNLDDRYIKAYSRRATARKE
Sbjct: 81 IDCYSRSIGLSPTAVAHANRAMAYLKIKKFQEAEDDCTEALNLDDRYIKAYSRRATARKE 140
Query: 1212 LKKLRDSLEDVEFALRLEPQDEDLKKQRAEVKSLLEKAILAKATGNATIAALVVKEV-EN 1036
L KL++S+ED EFALRLEP ++++KKQ AE KSL EK IL KA+G + +EV ++
Sbjct: 141 LGKLKESIEDTEFALRLEPNNQEIKKQHAEFKSLYEKEILQKASGVLRKSMQEAQEVGKS 200
Query: 1035 KAVANGHGKHVLSSPETSKKAGVGVLSDHLKSSVIXXXXXXXXXXXXXXXXXXXXXXXXX 856
+ NG G H S+ ++++ GV + +
Sbjct: 201 ETKENGLGMH--SASNSTQRTGVATVQGYQTKK-----------------------NNRT 235
Query: 855 XKTELVATIQDLXXXXXXXXXXXXXSNIGTPNSAYEFELSWKGFSGDRSLQAHLLKVTQP 676
K EL A++Q+L NI PN+AY+FE+SW+ SGDR+LQAHLLKVT P
Sbjct: 236 RKPELKASVQELASLAATRAMAEAAKNISPPNTAYQFEVSWRALSGDRALQAHLLKVTSP 295
Query: 675 ERLPQIFKNALTAPLLIDIIKCIATFFVEETELGVNYLLHLTKIPRFDMIIMCLHSADRA 496
LPQIFKNAL+A +L+DIIKC+ATFF EE +L + YL +LTK+PRFDM+IMCL S ++A
Sbjct: 296 SALPQIFKNALSASMLVDIIKCVATFFREEVDLAIKYLENLTKVPRFDMLIMCLSSTEKA 355
Query: 495 ELCRTWDEIFLSNATPVQHAESLNKLHPRYC 403
+L + WD++F + ATP++ AE L+ L YC
Sbjct: 356 DLLKVWDDVFCNEATPIEWAEILDNLRSVYC 386
>gb|EOY11663.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
isoform 4 [Theobroma cacao]
Length = 421
Score = 383 bits (983), Expect = e-103
Identities = 204/391 (52%), Positives = 267/391 (68%), Gaps = 2/391 (0%)
Frame = -2
Query: 1569 GKSKVTYLSNNTSELRPSV-NYDQLSHMSSSFMPNDNIVDAASEKDQGNEYFKKKKFNEA 1393
GKS + S +S + NYD+ + +SSSF+ +N+ DAASEK+ GNEYFK+KKF EA
Sbjct: 53 GKSSLIDSSTTSSRQYDYLQNYDKFNSLSSSFVTEENMPDAASEKELGNEYFKQKKFKEA 112
Query: 1392 IDCYSRSIALSPTAVAYANRAMAYLKIRRYKEAEDDCTEALNLDDRYIKAYSRRATARKE 1213
IDCYSRSI LSPTAVA+ANRAMAYLKI++++EAEDDCTEALNLDDRYIKAYSRRATARKE
Sbjct: 113 IDCYSRSIGLSPTAVAHANRAMAYLKIKKFQEAEDDCTEALNLDDRYIKAYSRRATARKE 172
Query: 1212 LKKLRDSLEDVEFALRLEPQDEDLKKQRAEVKSLLEKAILAKATGNATIAALVVKEV-EN 1036
L KL++S+ED EFALRLEP ++++KKQ AE KSL EK IL KA+G + +EV ++
Sbjct: 173 LGKLKESIEDTEFALRLEPNNQEIKKQHAEFKSLYEKEILQKASGVLRKSMQEAQEVGKS 232
Query: 1035 KAVANGHGKHVLSSPETSKKAGVGVLSDHLKSSVIXXXXXXXXXXXXXXXXXXXXXXXXX 856
+ NG G H S+ ++++ GV + +
Sbjct: 233 ETKENGLGMH--SASNSTQRTGVATVQGYQTKK-----------------------NNRT 267
Query: 855 XKTELVATIQDLXXXXXXXXXXXXXSNIGTPNSAYEFELSWKGFSGDRSLQAHLLKVTQP 676
K EL A++Q+L NI PN+AY+FE+SW+ SGDR+LQAHLLKVT P
Sbjct: 268 RKPELKASVQELASLAATRAMAEAAKNISPPNTAYQFEVSWRALSGDRALQAHLLKVTSP 327
Query: 675 ERLPQIFKNALTAPLLIDIIKCIATFFVEETELGVNYLLHLTKIPRFDMIIMCLHSADRA 496
LPQIFKNAL+A +L+DIIKC+ATFF EE +L + YL +LTK+PRFDM+IMCL S ++A
Sbjct: 328 SALPQIFKNALSASMLVDIIKCVATFFREEVDLAIKYLENLTKVPRFDMLIMCLSSTEKA 387
Query: 495 ELCRTWDEIFLSNATPVQHAESLNKLHPRYC 403
+L + WD++F + ATP++ AE L+ L YC
Sbjct: 388 DLLKVWDDVFCNEATPIEWAEILDNLRSVYC 418
>gb|EOY11661.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
isoform 2 [Theobroma cacao]
Length = 422
Score = 383 bits (983), Expect = e-103
Identities = 204/391 (52%), Positives = 267/391 (68%), Gaps = 2/391 (0%)
Frame = -2
Query: 1569 GKSKVTYLSNNTSELRPSV-NYDQLSHMSSSFMPNDNIVDAASEKDQGNEYFKKKKFNEA 1393
GKS + S +S + NYD+ + +SSSF+ +N+ DAASEK+ GNEYFK+KKF EA
Sbjct: 54 GKSSLIDSSTTSSRQYDYLQNYDKFNSLSSSFVTEENMPDAASEKELGNEYFKQKKFKEA 113
Query: 1392 IDCYSRSIALSPTAVAYANRAMAYLKIRRYKEAEDDCTEALNLDDRYIKAYSRRATARKE 1213
IDCYSRSI LSPTAVA+ANRAMAYLKI++++EAEDDCTEALNLDDRYIKAYSRRATARKE
Sbjct: 114 IDCYSRSIGLSPTAVAHANRAMAYLKIKKFQEAEDDCTEALNLDDRYIKAYSRRATARKE 173
Query: 1212 LKKLRDSLEDVEFALRLEPQDEDLKKQRAEVKSLLEKAILAKATGNATIAALVVKEV-EN 1036
L KL++S+ED EFALRLEP ++++KKQ AE KSL EK IL KA+G + +EV ++
Sbjct: 174 LGKLKESIEDTEFALRLEPNNQEIKKQHAEFKSLYEKEILQKASGVLRKSMQEAQEVGKS 233
Query: 1035 KAVANGHGKHVLSSPETSKKAGVGVLSDHLKSSVIXXXXXXXXXXXXXXXXXXXXXXXXX 856
+ NG G H S+ ++++ GV + +
Sbjct: 234 ETKENGLGMH--SASNSTQRTGVATVQGYQTKK-----------------------NNRT 268
Query: 855 XKTELVATIQDLXXXXXXXXXXXXXSNIGTPNSAYEFELSWKGFSGDRSLQAHLLKVTQP 676
K EL A++Q+L NI PN+AY+FE+SW+ SGDR+LQAHLLKVT P
Sbjct: 269 RKPELKASVQELASLAATRAMAEAAKNISPPNTAYQFEVSWRALSGDRALQAHLLKVTSP 328
Query: 675 ERLPQIFKNALTAPLLIDIIKCIATFFVEETELGVNYLLHLTKIPRFDMIIMCLHSADRA 496
LPQIFKNAL+A +L+DIIKC+ATFF EE +L + YL +LTK+PRFDM+IMCL S ++A
Sbjct: 329 SALPQIFKNALSASMLVDIIKCVATFFREEVDLAIKYLENLTKVPRFDMLIMCLSSTEKA 388
Query: 495 ELCRTWDEIFLSNATPVQHAESLNKLHPRYC 403
+L + WD++F + ATP++ AE L+ L YC
Sbjct: 389 DLLKVWDDVFCNEATPIEWAEILDNLRSVYC 419
>gb|EOY11660.1| Tetratricopeptide repeat-like superfamily protein, putative isoform 1
[Theobroma cacao]
Length = 468
Score = 376 bits (966), Expect = e-101
Identities = 204/415 (49%), Positives = 271/415 (65%), Gaps = 26/415 (6%)
Frame = -2
Query: 1569 GKSKVTYLSNNTSELRPSV-NYDQLSHMSSSFMPNDNIVDAASEKDQGNEYFKKKKFNEA 1393
GKS + S +S + NYD+ + +SSSF+ +N+ DAASEK+ GNEYFK+KKF EA
Sbjct: 53 GKSSLIDSSTTSSRQYDYLQNYDKFNSLSSSFVTEENMPDAASEKELGNEYFKQKKFKEA 112
Query: 1392 IDCYSRSIALSPTAVAYANRAMAYLKIRRYKEAEDDCTEALNLDDRYIKAYSRRATARKE 1213
IDCYSRSI LSPTAVA+ANRAMAYLKI++++EAEDDCTEALNLDDRYIKAYSRRATARKE
Sbjct: 113 IDCYSRSIGLSPTAVAHANRAMAYLKIKKFQEAEDDCTEALNLDDRYIKAYSRRATARKE 172
Query: 1212 LKKLRDSLEDVEFALRLEPQDEDLKKQRAEVKSLLEKAILAKATGNATIAALVVKEV-EN 1036
L KL++S+ED EFALRLEP ++++KKQ AE KSL EK IL KA+G + +EV ++
Sbjct: 173 LGKLKESIEDTEFALRLEPNNQEIKKQHAEFKSLYEKEILQKASGVLRKSMQEAQEVGKS 232
Query: 1035 KAVANGHGKHVLSSPETSKKAGVGVLSDHL------------------------KSSVIX 928
+ NG G H S+ ++++ GV + + ++++
Sbjct: 233 ETKENGLGMH--SASNSTQRTGVATVQGYQTKVSEYDKQKKPEKGSVTSEGIGDRNTLAG 290
Query: 927 XXXXXXXXXXXXXXXXXXXXXXXXXKTELVATIQDLXXXXXXXXXXXXXSNIGTPNSAYE 748
K EL A++Q+L NI PN+AY+
Sbjct: 291 SRKDGTQLDSGIVGLESIKKNNRTRKPELKASVQELASLAATRAMAEAAKNISPPNTAYQ 350
Query: 747 FELSWKGFSGDRSLQAHLLKVTQPERLPQIFKNALTAPLLIDIIKCIATFFVEETELGVN 568
FE+SW+ SGDR+LQAHLLKVT P LPQIFKNAL+A +L+DIIKC+ATFF EE +L +
Sbjct: 351 FEVSWRALSGDRALQAHLLKVTSPSALPQIFKNALSASMLVDIIKCVATFFREEVDLAIK 410
Query: 567 YLLHLTKIPRFDMIIMCLHSADRAELCRTWDEIFLSNATPVQHAESLNKLHPRYC 403
YL +LTK+PRFDM+IMCL S ++A+L + WD++F + ATP++ AE L+ L YC
Sbjct: 411 YLENLTKVPRFDMLIMCLSSTEKADLLKVWDDVFCNEATPIEWAEILDNLRSVYC 465
>gb|EMJ06489.1| hypothetical protein PRUPE_ppa006661mg [Prunus persica]
Length = 401
Score = 373 bits (957), Expect = e-100
Identities = 196/388 (50%), Positives = 259/388 (66%)
Frame = -2
Query: 1566 KSKVTYLSNNTSELRPSVNYDQLSHMSSSFMPNDNIVDAASEKDQGNEYFKKKKFNEAID 1387
K K L ++ S N D ++ MSSSF+ D++ DAASEK+ GNEYFK+KKF EAID
Sbjct: 36 KLKTRDLGTSSGNYDYSRNLDSINTMSSSFISEDSLPDAASEKELGNEYFKQKKFREAID 95
Query: 1386 CYSRSIALSPTAVAYANRAMAYLKIRRYKEAEDDCTEALNLDDRYIKAYSRRATARKELK 1207
CYSRSIALSP+AVAYANRAMAY+KI+ ++EAEDDCTEALNLDDRYIKAYSRRATARKEL
Sbjct: 96 CYSRSIALSPSAVAYANRAMAYIKIKSFQEAEDDCTEALNLDDRYIKAYSRRATARKELG 155
Query: 1206 KLRDSLEDVEFALRLEPQDEDLKKQRAEVKSLLEKAILAKATGNATIAALVVKEVENKAV 1027
KL++S+ED EFALRLEPQ++++KKQ E KSL +K IL KA+G + +++V K
Sbjct: 156 KLKESIEDAEFALRLEPQNQEIKKQYTEAKSLYDKTILQKASGAQKNSVQEMRKV-GKLD 214
Query: 1026 ANGHGKHVLSSPETSKKAGVGVLSDHLKSSVIXXXXXXXXXXXXXXXXXXXXXXXXXXKT 847
+G+ + + +++ + + DH K +
Sbjct: 215 TKVNGQSIQPASSSAQITEMTAVQDHTKRN------------------------NTTRNP 250
Query: 846 ELVATIQDLXXXXXXXXXXXXXSNIGTPNSAYEFELSWKGFSGDRSLQAHLLKVTQPERL 667
E+ A++Q+L I PNSAY+FE+SW+GFSGD + Q LLK P L
Sbjct: 251 EVKASVQELASRAASRVKAVAAEKIKPPNSAYQFEVSWRGFSGDNARQTSLLKAISPSAL 310
Query: 666 PQIFKNALTAPLLIDIIKCIATFFVEETELGVNYLLHLTKIPRFDMIIMCLHSADRAELC 487
PQIFKNALT P+L+DIIKC+ATFFVEE +L VNYL +LT++PRFD +IM L S+D A+L
Sbjct: 311 PQIFKNALTVPILLDIIKCVATFFVEEMDLAVNYLENLTRVPRFDTLIMFLSSSDNADLV 370
Query: 486 RTWDEIFLSNATPVQHAESLNKLHPRYC 403
+ WDE+F + ATP+++AE L+ L +YC
Sbjct: 371 KIWDEVFDNEATPIEYAEKLDNLRTKYC 398
>ref|XP_002330255.1| predicted protein [Populus trichocarpa]
Length = 434
Score = 369 bits (948), Expect = 2e-99
Identities = 201/386 (52%), Positives = 262/386 (67%), Gaps = 13/386 (3%)
Frame = -2
Query: 1518 SVNYDQLSHMSSSFMPNDNIVDAASEKDQGNEYFKKKKFNEAIDCYSRSIALSPTAVAYA 1339
S N+ ++ +SSSF ++ VDA +EK+ GNEYFK+KKFNEAI+CYSRSIALSPTAVAYA
Sbjct: 73 SRNFGAINRLSSSFTTDEITVDATTEKELGNEYFKQKKFNEAIECYSRSIALSPTAVAYA 132
Query: 1338 NRAMAYLKIRR----YKEAEDDCTEALNLDDRYIKAYSRRATARKELKKLRDSLEDVEFA 1171
NRAMAYLKI+R ++EAEDDCTEALNLDDRYIKAYSRRATARKEL KL++S+ED EFA
Sbjct: 133 NRAMAYLKIKRQFFLFREAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFA 192
Query: 1170 LRLEPQDEDLKKQRAEVKSLLEKA-------ILAKATGNATIAALVVKE-VENKAVANGH 1015
L+LEP ++++KKQ AEVKSL EKA IL KA+G + ++ ++A NGH
Sbjct: 193 LKLEPNNQEIKKQYAEVKSLYEKASDYLMLEILQKASGTLRSSLQGTQQGGRSEASVNGH 252
Query: 1014 GKHVLSSPETSKKAGVGV-LSDHLKSSVIXXXXXXXXXXXXXXXXXXXXXXXXXXKTELV 838
H +S ++K GV D+ K + + EL
Sbjct: 253 AVHPVSI--ATQKTGVSASKKDNTKKN------------------------NRTRRQELK 286
Query: 837 ATIQDLXXXXXXXXXXXXXSNIGTPNSAYEFELSWKGFSGDRSLQAHLLKVTQPERLPQI 658
++ +L NI PNSAY+FE+SW+GFSGDR+LQAHLLKVT P LPQI
Sbjct: 287 TSVIELASQAASRAMAEAAKNITPPNSAYQFEVSWQGFSGDRALQAHLLKVTSPSALPQI 346
Query: 657 FKNALTAPLLIDIIKCIATFFVEETELGVNYLLHLTKIPRFDMIIMCLHSADRAELCRTW 478
FKNAL+ P+LIDIIKC+A+FF+++ + V YL +LTK+PRFDM+IMCL S D ++L + W
Sbjct: 347 FKNALSVPILIDIIKCVASFFIDDMDFAVKYLENLTKVPRFDMLIMCLSSTDTSDLLKMW 406
Query: 477 DEIFLSNATPVQHAESLNKLHPRYCP 400
D +F S +TP+++AE L+ L +YCP
Sbjct: 407 DGVFCSASTPIEYAEILDNLRSKYCP 432
>ref|XP_002277910.2| PREDICTED: RNA polymerase II-associated protein 3-like [Vitis
vinifera]
Length = 474
Score = 365 bits (937), Expect = 3e-98
Identities = 199/397 (50%), Positives = 255/397 (64%), Gaps = 17/397 (4%)
Frame = -2
Query: 1542 NNTSELRPSVNYDQLSHMSSSFMPNDNIVDAASEKDQGNEYFKKKKFNEAIDCYSRSIAL 1363
++T + S N+D +S +SSSFM +++ DAASEK+ GNEYFK++KF EAIDCYSRSIAL
Sbjct: 75 SDTRQHEYSRNHDAISRISSSFMTEESLPDAASEKELGNEYFKQRKFKEAIDCYSRSIAL 134
Query: 1362 SPTAVAYANRAMAYLKIRRYKEAEDDCTEALNLDDRYIKAYSRRATARKELKKLRDSLED 1183
PTAVAYANRAMAY+KI+R++EAEDDC EALNLDDRYIKAYSRRATARKEL K +++ ED
Sbjct: 135 LPTAVAYANRAMAYIKIKRFREAEDDCMEALNLDDRYIKAYSRRATARKELGKFKEATED 194
Query: 1182 VEFALRLEPQDEDLKKQRAEVKSLLEKAILAKATGNATIAALVVKEVENKAV-ANGHGKH 1006
EFALRLEPQ++++KKQ AE KSL EK IL KA+G + +++V V N +
Sbjct: 195 AEFALRLEPQNQEIKKQYAEAKSLYEKEILQKASGALKSSVQGLQKVGKSVVEVNADTQG 254
Query: 1005 VLSSPETSKKAGVGVLSDHLK----------------SSVIXXXXXXXXXXXXXXXXXXX 874
V S +S+ AG + D +
Sbjct: 255 VRSISSSSQGAGEAAIQDRFMVPANTSTSMEETENKGTGNRSKENGYLENAVQNSGLEDV 314
Query: 873 XXXXXXXKTELVATIQDLXXXXXXXXXXXXXSNIGTPNSAYEFELSWKGFSGDRSLQAHL 694
+ E+ +++Q+L NI PNSAY+FE+SW+G GD +LQA
Sbjct: 315 MSNHKTGQREMKSSLQELASRAASRAMVEAAKNITAPNSAYQFEVSWRGLLGDHALQASY 374
Query: 693 LKVTQPERLPQIFKNALTAPLLIDIIKCIATFFVEETELGVNYLLHLTKIPRFDMIIMCL 514
LK P LPQIFKNAL+AP+LIDIIKCIATFFV E +L V +L +LTKI RFDMIIMCL
Sbjct: 375 LKAISPNALPQIFKNALSAPILIDIIKCIATFFVTEMDLAVKFLDNLTKISRFDMIIMCL 434
Query: 513 HSADRAELCRTWDEIFLSNATPVQHAESLNKLHPRYC 403
S D+ +L + WDE+F + ATP +A++L KL PRYC
Sbjct: 435 SSTDKTDLLKIWDEVFCNKATPSGYADTLGKLRPRYC 471
>emb|CBI39598.3| unnamed protein product [Vitis vinifera]
Length = 1097
Score = 365 bits (937), Expect = 3e-98
Identities = 199/397 (50%), Positives = 255/397 (64%), Gaps = 17/397 (4%)
Frame = -2
Query: 1542 NNTSELRPSVNYDQLSHMSSSFMPNDNIVDAASEKDQGNEYFKKKKFNEAIDCYSRSIAL 1363
++T + S N+D +S +SSSFM +++ DAASEK+ GNEYFK++KF EAIDCYSRSIAL
Sbjct: 698 SDTRQHEYSRNHDAISRISSSFMTEESLPDAASEKELGNEYFKQRKFKEAIDCYSRSIAL 757
Query: 1362 SPTAVAYANRAMAYLKIRRYKEAEDDCTEALNLDDRYIKAYSRRATARKELKKLRDSLED 1183
PTAVAYANRAMAY+KI+R++EAEDDC EALNLDDRYIKAYSRRATARKEL K +++ ED
Sbjct: 758 LPTAVAYANRAMAYIKIKRFREAEDDCMEALNLDDRYIKAYSRRATARKELGKFKEATED 817
Query: 1182 VEFALRLEPQDEDLKKQRAEVKSLLEKAILAKATGNATIAALVVKEVENKAV-ANGHGKH 1006
EFALRLEPQ++++KKQ AE KSL EK IL KA+G + +++V V N +
Sbjct: 818 AEFALRLEPQNQEIKKQYAEAKSLYEKEILQKASGALKSSVQGLQKVGKSVVEVNADTQG 877
Query: 1005 VLSSPETSKKAGVGVLSDHLK----------------SSVIXXXXXXXXXXXXXXXXXXX 874
V S +S+ AG + D +
Sbjct: 878 VRSISSSSQGAGEAAIQDRFMVPANTSTSMEETENKGTGNRSKENGYLENAVQNSGLEDV 937
Query: 873 XXXXXXXKTELVATIQDLXXXXXXXXXXXXXSNIGTPNSAYEFELSWKGFSGDRSLQAHL 694
+ E+ +++Q+L NI PNSAY+FE+SW+G GD +LQA
Sbjct: 938 MSNHKTGQREMKSSLQELASRAASRAMVEAAKNITAPNSAYQFEVSWRGLLGDHALQASY 997
Query: 693 LKVTQPERLPQIFKNALTAPLLIDIIKCIATFFVEETELGVNYLLHLTKIPRFDMIIMCL 514
LK P LPQIFKNAL+AP+LIDIIKCIATFFV E +L V +L +LTKI RFDMIIMCL
Sbjct: 998 LKAISPNALPQIFKNALSAPILIDIIKCIATFFVTEMDLAVKFLDNLTKISRFDMIIMCL 1057
Query: 513 HSADRAELCRTWDEIFLSNATPVQHAESLNKLHPRYC 403
S D+ +L + WDE+F + ATP +A++L KL PRYC
Sbjct: 1058 SSTDKTDLLKIWDEVFCNKATPSGYADTLGKLRPRYC 1094
>ref|XP_004302236.1| PREDICTED: RNA polymerase II-associated protein 3-like [Fragaria
vesca subsp. vesca]
Length = 407
Score = 364 bits (934), Expect = 6e-98
Identities = 192/373 (51%), Positives = 249/373 (66%), Gaps = 1/373 (0%)
Frame = -2
Query: 1518 SVNYDQLSHMSSSFMPNDNIVDAASEKDQGNEYFKKKKFNEAIDCYSRSIALSPTAVAYA 1339
S NY+ ++ +SSSF D + DAASEKD GNEYFK+KKF EAIDCYSRSIAL+PTAVA+A
Sbjct: 58 STNYEPMNTVSSSFTSEDGLPDAASEKDLGNEYFKQKKFKEAIDCYSRSIALTPTAVAFA 117
Query: 1338 NRAMAYLKIRRYKEAEDDCTEALNLDDRYIKAYSRRATARKELKKLRDSLEDVEFALRLE 1159
NRAM+Y+KI+R++EAE+DCTEALNLDDRYIKAYSRRATARKEL KL++S+ED EFALRLE
Sbjct: 118 NRAMSYIKIKRFQEAENDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDAEFALRLE 177
Query: 1158 PQDEDLKKQRAEVKSLLEKAILAKATGNATIAALVVKEVENK-AVANGHGKHVLSSPETS 982
P ++++KKQ AE KSL EK IL K +G I+ ++VE NGH +SS T+
Sbjct: 178 PHNQEIKKQYAEAKSLYEKGILQKVSGAIKISEQDKQKVEKSGTTVNGHSIQPVSS--TT 235
Query: 981 KKAGVGVLSDHLKSSVIXXXXXXXXXXXXXXXXXXXXXXXXXXKTELVATIQDLXXXXXX 802
++ + DH K K ++Q+L
Sbjct: 236 QRTETTAVGDHTKK------------------------INTNGKQASKLSVQELASRAAS 271
Query: 801 XXXXXXXSNIGTPNSAYEFELSWKGFSGDRSLQAHLLKVTQPERLPQIFKNALTAPLLID 622
NI P+SAY+FE SW+G SGDR+LQA LLK P LPQIFKNALT +L+D
Sbjct: 272 RAKALAAENITPPSSAYQFEASWRGLSGDRALQAKLLKAISPSALPQIFKNALTVHILVD 331
Query: 621 IIKCIATFFVEETELGVNYLLHLTKIPRFDMIIMCLHSADRAELCRTWDEIFLSNATPVQ 442
I+KC+ TFF++E +L V+ L +LTK+PRFD +IM L S D+A+L + WDE+F + ATP++
Sbjct: 332 ILKCVTTFFIDEMDLAVSVLENLTKVPRFDTLIMFLSSNDKADLAKIWDEVFYNEATPIE 391
Query: 441 HAESLNKLHPRYC 403
AE L+ L +YC
Sbjct: 392 FAEKLDNLRAKYC 404
>ref|XP_006472205.1| PREDICTED: RNA polymerase II-associated protein 3-like [Citrus
sinensis]
Length = 438
Score = 363 bits (931), Expect = 1e-97
Identities = 196/382 (51%), Positives = 249/382 (65%), Gaps = 10/382 (2%)
Frame = -2
Query: 1518 SVNYDQLSHMSSSFMPNDNIVDAASEKDQGNEYFKKKKFNEAIDCYSRSIALSPTAVAYA 1339
S NYD +SH+SSS M ++ DA SEK+ GNE FK+KKF EAIDCYSRSIALSPTAVAYA
Sbjct: 62 SRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYA 121
Query: 1338 NRAMAYLKIRRYKEAEDDCTEALNLDDRYIKAYSRRATARKELKKLRDSLEDVEFALRLE 1159
NRAMAYLK+RR++EAEDDCTEALNLDDRYIKAYSRRATARKEL KL++S+ED EFALRLE
Sbjct: 122 NRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLE 181
Query: 1158 PQDEDLKKQRAEVKSLLEKAILAKATGNATIAALVVKEVENKAVANGHGKHVLSSPETSK 979
PQ++++KKQ AEVKSL EK + KA+ E K+ +G V + T++
Sbjct: 182 PQNQEIKKQLAEVKSLYEKEVFQKASKTL--------EKYGKSGMKVNGHEVRAVRNTTQ 233
Query: 978 KAGVGVLSD----------HLKSSVIXXXXXXXXXXXXXXXXXXXXXXXXXXKTELVATI 829
K GV + D +L+ K L A++
Sbjct: 234 KTGVAEIQDLTISKKTENKNLRDESKTEGQRDGSGANATHISGLDKRNHRTKKAVLDASV 293
Query: 828 QDLXXXXXXXXXXXXXSNIGTPNSAYEFELSWKGFSGDRSLQAHLLKVTQPERLPQIFKN 649
Q+L NI P SAYEFE+SW+GF+GD +LQA LLK P LPQIFKN
Sbjct: 294 QELATRATSRAVAEAAKNITPPKSAYEFEVSWRGFAGDHALQARLLKAISPNALPQIFKN 353
Query: 648 ALTAPLLIDIIKCIATFFVEETELGVNYLLHLTKIPRFDMIIMCLHSADRAELCRTWDEI 469
AL+A +LIDI+K +ATFF E +L + YL +LT +PRFD++IMCL AD+A+L + WDE
Sbjct: 354 ALSASILIDIVKVVATFFTGEVDLAIKYLEYLTMVPRFDLVIMCLSLADKADLRKVWDET 413
Query: 468 FLSNATPVQHAESLNKLHPRYC 403
F + +TP+++AE L+ L +YC
Sbjct: 414 FCNESTPIEYAEILDNLRSKYC 435
>gb|EOY11662.1| Tetratricopeptide repeat-like superfamily protein, putative isoform
3, partial [Theobroma cacao]
Length = 412
Score = 358 bits (919), Expect = 4e-96
Identities = 195/394 (49%), Positives = 258/394 (65%), Gaps = 26/394 (6%)
Frame = -2
Query: 1569 GKSKVTYLSNNTSELRPSV-NYDQLSHMSSSFMPNDNIVDAASEKDQGNEYFKKKKFNEA 1393
GKS + S +S + NYD+ + +SSSF+ +N+ DAASEK+ GNEYFK+KKF EA
Sbjct: 21 GKSSLIDSSTTSSRQYDYLQNYDKFNSLSSSFVTEENMPDAASEKELGNEYFKQKKFKEA 80
Query: 1392 IDCYSRSIALSPTAVAYANRAMAYLKIRRYKEAEDDCTEALNLDDRYIKAYSRRATARKE 1213
IDCYSRSI LSPTAVA+ANRAMAYLKI++++EAEDDCTEALNLDDRYIKAYSRRATARKE
Sbjct: 81 IDCYSRSIGLSPTAVAHANRAMAYLKIKKFQEAEDDCTEALNLDDRYIKAYSRRATARKE 140
Query: 1212 LKKLRDSLEDVEFALRLEPQDEDLKKQRAEVKSLLEKAILAKATGNATIAALVVKEV-EN 1036
L KL++S+ED EFALRLEP ++++KKQ AE KSL EK IL KA+G + +EV ++
Sbjct: 141 LGKLKESIEDTEFALRLEPNNQEIKKQHAEFKSLYEKEILQKASGVLRKSMQEAQEVGKS 200
Query: 1035 KAVANGHGKHVLSSPETSKKAGVGVLSDHL------------------------KSSVIX 928
+ NG G H S+ ++++ GV + + ++++
Sbjct: 201 ETKENGLGMH--SASNSTQRTGVATVQGYQTKVSEYDKQKKPEKGSVTSEGIGDRNTLAG 258
Query: 927 XXXXXXXXXXXXXXXXXXXXXXXXXKTELVATIQDLXXXXXXXXXXXXXSNIGTPNSAYE 748
K EL A++Q+L NI PN+AY+
Sbjct: 259 SRKDGTQLDSGIVGLESIKKNNRTRKPELKASVQELASLAATRAMAEAAKNISPPNTAYQ 318
Query: 747 FELSWKGFSGDRSLQAHLLKVTQPERLPQIFKNALTAPLLIDIIKCIATFFVEETELGVN 568
FE+SW+ SGDR+LQAHLLKVT P LPQIFKNAL+A +L+DIIKC+ATFF EE +L +
Sbjct: 319 FEVSWRALSGDRALQAHLLKVTSPSALPQIFKNALSASMLVDIIKCVATFFREEVDLAIK 378
Query: 567 YLLHLTKIPRFDMIIMCLHSADRAELCRTWDEIF 466
YL +LTK+PRFDM+IMCL S ++A+L + WD++F
Sbjct: 379 YLENLTKVPRFDMLIMCLSSTEKADLLKVWDDVF 412
>ref|XP_006433540.1| hypothetical protein CICLE_v10003914mg [Citrus clementina]
gi|557535662|gb|ESR46780.1| hypothetical protein
CICLE_v10003914mg [Citrus clementina]
Length = 977
Score = 354 bits (908), Expect = 7e-95
Identities = 194/382 (50%), Positives = 244/382 (63%), Gaps = 10/382 (2%)
Frame = -2
Query: 1518 SVNYDQLSHMSSSFMPNDNIVDAASEKDQGNEYFKKKKFNEAIDCYSRSIALSPTAVAYA 1339
S NYD +S +SSS M ++ DA SEK+ GNE FK+KKF EAIDCYSRSIALSPTAVAYA
Sbjct: 601 SRNYDPVSRISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYA 660
Query: 1338 NRAMAYLKIRRYKEAEDDCTEALNLDDRYIKAYSRRATARKELKKLRDSLEDVEFALRLE 1159
NRAMAYLK+RR++EAEDDCTEALNLDDRYIKAYSRRATARKEL KL++S+ED EFALRLE
Sbjct: 661 NRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLE 720
Query: 1158 PQDEDLKKQRAEVKSLLEKAILAKATGNATIAALVVKEVENKAVANGHGKHVLSSPETSK 979
PQ++++KKQ AEVKSL EK + KA+ E K+ +G V + T +
Sbjct: 721 PQNQEIKKQLAEVKSLYEKEVFQKASKTL--------EKYGKSGMKVNGHEVRAVRNTIQ 772
Query: 978 KAGVGVLSD----------HLKSSVIXXXXXXXXXXXXXXXXXXXXXXXXXXKTELVATI 829
K GV + D +L+ K L A++
Sbjct: 773 KTGVAEIQDLTISKKTENKNLRDESKTEGQRDGSGANATHISGLDKRNHRTKKAVLDASV 832
Query: 828 QDLXXXXXXXXXXXXXSNIGTPNSAYEFELSWKGFSGDRSLQAHLLKVTQPERLPQIFKN 649
Q+L NI P SAYEFE+SW+GF+GD +LQA LLK P LPQIFKN
Sbjct: 833 QELATRATSRAVAEAAKNITPPKSAYEFEVSWRGFAGDHALQARLLKAISPNALPQIFKN 892
Query: 648 ALTAPLLIDIIKCIATFFVEETELGVNYLLHLTKIPRFDMIIMCLHSADRAELCRTWDEI 469
AL+A +LIDI+K +A FF E +L + YL +LT +PRFD +IMCL AD+A+L + WDE
Sbjct: 893 ALSASILIDIVKVVAMFFPGEVDLAIKYLEYLTMVPRFDFVIMCLSLADKADLRKVWDET 952
Query: 468 FLSNATPVQHAESLNKLHPRYC 403
F + TP+++AE L+ L +YC
Sbjct: 953 FCNELTPIEYAEILDNLRSKYC 974
>gb|EXB53029.1| RNA polymerase II-associated protein 3 [Morus notabilis]
Length = 450
Score = 351 bits (901), Expect = 4e-94
Identities = 195/408 (47%), Positives = 258/408 (63%), Gaps = 19/408 (4%)
Frame = -2
Query: 1569 GKSKVTYLSNNTSELRPSVNYDQLSHMSSSFMPNDNIVDAASEKDQGNEYFKKKKFNEAI 1390
GKS +++ S YD ++ +SSS + D+ DAASEK+ GNEYFK+KKF EAI
Sbjct: 67 GKSSTFEYLSSSMPYDYSRKYDAINQVSSSSISEDSYTDAASEKELGNEYFKQKKFKEAI 126
Query: 1389 DCYSRSIALSPTAVAYANRAMAYLKIRR-----------------YKEAEDDCTEALNLD 1261
DCYSRSIALS TAVAYANRAMAYLK++R ++EAE DCTEALN+D
Sbjct: 127 DCYSRSIALSSTAVAYANRAMAYLKLKRQLLPYLIFFCKSIFLIRFQEAEGDCTEALNMD 186
Query: 1260 DRYIKAYSRRATARKELKKLRDSLEDVEFALRLEPQDEDLKKQRAEVKSLLEKAILAKAT 1081
DRYIKAYSRRATARKEL KL++ +ED EFALRLEP ++++KKQ +E KSL EK IL KA+
Sbjct: 187 DRYIKAYSRRATARKELGKLKECIEDAEFALRLEPNNQEIKKQYSEAKSLCEKVILQKAS 246
Query: 1080 G--NATIAALVVKEVENKAVANGHGKHVLSSPETSKKAGVGVLSDHLKSSVIXXXXXXXX 907
T+ + E ++ V N + V S+ ++K V D+ K +
Sbjct: 247 VALENTVQKMQKAEKKDTKVQNNGIQPVESA---TQKTEAAVAEDYTKIN---------- 293
Query: 906 XXXXXXXXXXXXXXXXXXKTELVATIQDLXXXXXXXXXXXXXSNIGTPNSAYEFELSWKG 727
K E A++Q+L NI +P SAY+FE+SW+G
Sbjct: 294 --------------QTAKKQEPKASVQELASRAASRAMNGTAKNIRSPTSAYQFEVSWRG 339
Query: 726 FSGDRSLQAHLLKVTQPERLPQIFKNALTAPLLIDIIKCIATFFVEETELGVNYLLHLTK 547
SGDR+LQA LLK P LPQIFKN+LT P+L+DI+KCIATFF+EE ++ V +L +LTK
Sbjct: 340 LSGDRALQASLLKTVSPGALPQIFKNSLTVPILVDIVKCIATFFIEEMDVTVTFLENLTK 399
Query: 546 IPRFDMIIMCLHSADRAELCRTWDEIFLSNATPVQHAESLNKLHPRYC 403
+PRFD+++MCL S DRA+L + W+E+F ATP++HAE L+ L +YC
Sbjct: 400 VPRFDILVMCLTSKDRADLVKIWNEVFCKEATPIEHAEKLDNLRSKYC 447
>ref|XP_006392426.1| hypothetical protein EUTSA_v10023436mg [Eutrema salsugineum]
gi|557088932|gb|ESQ29712.1| hypothetical protein
EUTSA_v10023436mg [Eutrema salsugineum]
Length = 473
Score = 348 bits (892), Expect = 5e-93
Identities = 201/430 (46%), Positives = 268/430 (62%), Gaps = 48/430 (11%)
Frame = -2
Query: 1548 LSNNTSE-LRPSVN--------YDQLSHMSSSFMPNDNIVDAASEKDQGNEYFKKKKFNE 1396
LSN TSE RPS + Y +S +SSSF +++ +DA SEK+QGNEYFK+KKFNE
Sbjct: 41 LSNPTSEKFRPSGSGQYDFVKKYGPMSGLSSSFADDESPLDANSEKEQGNEYFKQKKFNE 100
Query: 1395 AIDCYSRSIALSPTAVAYANRAMAYLKIRRYKEAEDDCTEALNLDDRYIKAYSRRATARK 1216
AIDCYSRSIALSP AVA+ANRAMAYLKI+RY+EAE DCTEALNLDDRY KAYSRRATARK
Sbjct: 101 AIDCYSRSIALSPNAVAFANRAMAYLKIKRYREAEIDCTEALNLDDRYTKAYSRRATARK 160
Query: 1215 ELKKLRDSLEDVEFALRLEPQDEDLKKQRAEVKSLLEKAILAKATG--NATIAALV---- 1054
L +++++ED EFALRLEPQ ++L+KQ A++KSLLEK I+ KA+G +T L+
Sbjct: 161 ALGMVKEAMEDAEFALRLEPQSQELQKQYADIKSLLEKEIIEKASGAMQSTAQELLKTAG 220
Query: 1053 ------------VKEVENKAVANG------------HGKHVLSS--PETSKKAG---VGV 961
K V A NG GK ++ S PE K G +
Sbjct: 221 LDKKAKIPNTDTKKPVTLVAKTNGDMVRPVSRSNESSGKKLIESVDPEEKHKEGSKKISA 280
Query: 960 LSDHLKSSVIXXXXXXXXXXXXXXXXXXXXXXXXXXKT----ELVATIQDLXXXXXXXXX 793
+++++ + + + EL ++Q+L
Sbjct: 281 ITENVDNKKVTPISQSYEKEAKSSGGNVTQPSEQVNQVSTKLELKPSVQELATRAASLAM 340
Query: 792 XXXXSNIGTPNSAYEFELSWKGFSGDRSLQAHLLKVTQPERLPQIFKNALTAPLLIDIIK 613
NI P SAYEFE +W+ FSGDR+LQ LLKV P LPQIFKNALT+P+L+DIIK
Sbjct: 341 SEVTKNIKAPKSAYEFENTWRSFSGDRALQKQLLKVMTPSSLPQIFKNALTSPVLVDIIK 400
Query: 612 CIATFFVEETELGVNYLLHLTKIPRFDMIIMCLHSADRAELCRTWDEIFLSNATPVQHAE 433
C+A+ F E+ +L V Y+ +LTK+PRF+M++MCL S ++ EL + W+++F S ATP+++AE
Sbjct: 401 CVASIFTEDMDLAVKYIENLTKVPRFNMLVMCLTSTEKNELLKIWEDVFCSKATPMEYAE 460
Query: 432 SLNKLHPRYC 403
L+KL +YC
Sbjct: 461 VLDKLRLKYC 470
>ref|XP_004248819.1| PREDICTED: RNA polymerase II-associated protein 3-like [Solanum
lycopersicum]
Length = 470
Score = 343 bits (881), Expect = 9e-92
Identities = 187/398 (46%), Positives = 249/398 (62%), Gaps = 13/398 (3%)
Frame = -2
Query: 1560 KVTYLSNNTSELRPSVNYDQLSHMSSSFMPNDNIVDAASEKDQGNEYFKKKKFNEAIDCY 1381
K T + N S NY+ +SH+SS + ++ ++A SEK+ GNE FK+KKFNEAIDCY
Sbjct: 71 KSTSIRNAAGPYSYSKNYNPISHLSSELISEESNINANSEKELGNECFKQKKFNEAIDCY 130
Query: 1380 SRSIALSPTAVAYANRAMAYLKIRRYKEAEDDCTEALNLDDRYIKAYSRRATARKELKKL 1201
SRSIALSPTAV+YANRAMAYLKI+R++EAE+DCTEALNLDDRYIKAYSRR+T+RKEL KL
Sbjct: 131 SRSIALSPTAVSYANRAMAYLKIKRFQEAENDCTEALNLDDRYIKAYSRRSTSRKELGKL 190
Query: 1200 RDSLEDVEFALRLEPQDEDLKKQRAEVKSLLEKAILAKATGNATIAAL------------ 1057
++S+ED EFAL LEP++ ++KKQ EVK+L EK IL + +G ++A
Sbjct: 191 KESIEDAEFALWLEPRNPEIKKQYGEVKALYEKEILKRVSGATDVSAQGPQKSGKTIKIG 250
Query: 1056 -VVKEVENKAVANGHGKHVLSSPETSKKAGVGVLSDHLKSSVIXXXXXXXXXXXXXXXXX 880
V++ V + + + + + G + D
Sbjct: 251 PVIQSVSSSSQKVAEVRTIPAKENNRDVLGTAKVEDTHMQISNKDSDASPTVPTLNLAFG 310
Query: 879 XXXXXXXXXKTELVATIQDLXXXXXXXXXXXXXSNIGTPNSAYEFELSWKGFSGDRSLQA 700
K EL ++Q+L NI PNSAY+FE+SW+G SGDR+LQ
Sbjct: 311 TAKKTHKISKQELEESVQELAARAAGLAKTEAAKNIAAPNSAYQFEVSWRGLSGDRNLQT 370
Query: 699 HLLKVTQPERLPQIFKNALTAPLLIDIIKCIATFFVEETELGVNYLLHLTKIPRFDMIIM 520
LLKVT P LP+IFKNAL+AP+L+DI++CIATFF+E+ L + YL LTK+PRFDMIIM
Sbjct: 371 QLLKVTSPAMLPRIFKNALSAPMLMDIVRCIATFFIEDMNLAIRYLEDLTKVPRFDMIIM 430
Query: 519 CLHSADRAELCRTWDEIFLSNATPVQHAESLNKLHPRY 406
CL SAD++EL + W+EIF A +H+ +L L Y
Sbjct: 431 CLSSADKSELLKIWEEIFCKVAE--EHSATLGALRVSY 466
>ref|XP_006339932.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X1
[Solanum tuberosum]
Length = 468
Score = 341 bits (875), Expect = 4e-91
Identities = 185/398 (46%), Positives = 247/398 (62%), Gaps = 13/398 (3%)
Frame = -2
Query: 1560 KVTYLSNNTSELRPSVNYDQLSHMSSSFMPNDNIVDAASEKDQGNEYFKKKKFNEAIDCY 1381
K T + + S NY+ +SH+SS + ++ ++A SEK+ GNE FK+KKFNEAIDCY
Sbjct: 70 KSTSIRSAAGPYNYSKNYNPISHLSSELISEESNINANSEKELGNECFKQKKFNEAIDCY 129
Query: 1380 SRSIALSPTAVAYANRAMAYLKIRRYKEAEDDCTEALNLDDRYIKAYSRRATARKELKKL 1201
SRSIALSPTAV+YANRAMAYLKI+R++EAE+DCTEALNLDDRYIKAYSRR+T+RKEL KL
Sbjct: 130 SRSIALSPTAVSYANRAMAYLKIKRFQEAENDCTEALNLDDRYIKAYSRRSTSRKELGKL 189
Query: 1200 RDSLEDVEFALRLEPQDEDLKKQRAEVKSLLEKAILAKATGNATIAAL------------ 1057
++S+ED EFALRLEPQ+ ++KKQ EVK+L EK I + +G ++A
Sbjct: 190 KESIEDAEFALRLEPQNPEIKKQYGEVKALYEKEIRKRVSGATDVSAQRAQKSGKTIKSG 249
Query: 1056 -VVKEVENKAVANGHGKHVLSSPETSKKAGVGVLSDHLKSSVIXXXXXXXXXXXXXXXXX 880
V++ V + + + + G + D
Sbjct: 250 PVIQSVSSSSQKMAEVWTIPAKENNRDVPGTAKVEDTHMQINNKDSDASPTVPTLNPAFG 309
Query: 879 XXXXXXXXXKTELVATIQDLXXXXXXXXXXXXXSNIGTPNSAYEFELSWKGFSGDRSLQA 700
K EL ++Q+L NI PNSAY+FE+SW+G SGDR+LQ
Sbjct: 310 TAKKTHKISKQELEESVQELAARAAGLAKTEAAKNIAAPNSAYQFEVSWRGLSGDRNLQT 369
Query: 699 HLLKVTQPERLPQIFKNALTAPLLIDIIKCIATFFVEETELGVNYLLHLTKIPRFDMIIM 520
LLKVT P LP+IFKNAL+AP+L+DI++C+ATFF+E+ L + YL LTK+PRFDMIIM
Sbjct: 370 QLLKVTSPAMLPRIFKNALSAPMLMDIVRCVATFFIEDMNLAIRYLEDLTKVPRFDMIIM 429
Query: 519 CLHSADRAELCRTWDEIFLSNATPVQHAESLNKLHPRY 406
CL S D++EL + W+EIF A +H+ +L L Y
Sbjct: 430 CLSSTDKSELLKIWEEIFCKEAE--EHSATLGALRVPY 465
>ref|NP_176039.2| carboxylate clamp-tetratricopeptide repeat protein [Arabidopsis
thaliana] gi|53828529|gb|AAU94374.1| At1g56440
[Arabidopsis thaliana] gi|59958350|gb|AAX12885.1|
At1g56440 [Arabidopsis thaliana]
gi|110743110|dbj|BAE99447.1| hypothetical protein
[Arabidopsis thaliana] gi|332195274|gb|AEE33395.1|
carboxylate clamp-tetratricopeptide repeat [Arabidopsis
thaliana]
Length = 476
Score = 340 bits (873), Expect = 8e-91
Identities = 190/427 (44%), Positives = 265/427 (62%), Gaps = 40/427 (9%)
Frame = -2
Query: 1563 SKVTYLSNNTSELRPSVNYDQLSHMSSSFMPNDNIVDAASEKDQGNEYFKKKKFNEAIDC 1384
S T+ + + + + Y + +SSS + ++++D++SEK+QGNE+FK+KKFNEAIDC
Sbjct: 48 SSETFRPSGSGKYDFAKKYRSIRDLSSSLI-GESLLDSSSEKEQGNEFFKQKKFNEAIDC 106
Query: 1383 YSRSIALSPTAVAYANRAMAYLKIRRYKEAEDDCTEALNLDDRYIKAYSRRATARKELKK 1204
YSRSIALSP AV YANRAMAYLKI+RY+EAE DCTEALNLDDRYIKAYSRRATARKEL
Sbjct: 107 YSRSIALSPNAVTYANRAMAYLKIKRYREAEVDCTEALNLDDRYIKAYSRRATARKELGM 166
Query: 1203 LRDSLEDVEFALRLEPQDEDLKKQRAEVKSLLEKAI--------------LAKATG---- 1078
++++ ED EFALRLEP+ ++LKKQ A++KSLLEK I L K +G
Sbjct: 167 IKEAKEDAEFALRLEPESQELKKQYADIKSLLEKEIIEKATGAMQSTAQELLKTSGLDKK 226
Query: 1077 -----------NATIAALVVKEVENKAVANGH--GKHVLSS--PETSKKAG---VGVLSD 952
T+ A +++ + + GK ++ + PE K G + +++
Sbjct: 227 IQKPKTEMTSKPVTLVAKTNRDIVQPVLGSNESSGKKLIENIQPEEKSKEGSMKIPAITE 286
Query: 951 HLKSSVIXXXXXXXXXXXXXXXXXXXXXXXXXXKT----ELVATIQDLXXXXXXXXXXXX 784
L S + + EL ++Q+L
Sbjct: 287 ILDSKKVTPGSQSYEKEAKPSDRNGTQPSGPENQVSKQLELKPSVQELAAHAASLAMTEA 346
Query: 783 XSNIGTPNSAYEFELSWKGFSGDRSLQAHLLKVTQPERLPQIFKNALTAPLLIDIIKCIA 604
NI TP SAYEFE SW+ FSGD +L++ LLKVT P LPQIFKNALT+P+L+DIIKC+A
Sbjct: 347 SKNIKTPKSAYEFENSWRSFSGDSALRSQLLKVTTPSSLPQIFKNALTSPVLVDIIKCVA 406
Query: 603 TFFVEETELGVNYLLHLTKIPRFDMIIMCLHSADRAELCRTWDEIFLSNATPVQHAESLN 424
+FF E+ +L V Y+ +LTK+PRF+M++MCL S ++ EL + W+++F + ATP+++AE L+
Sbjct: 407 SFFTEDMDLAVKYIENLTKVPRFNMLVMCLTSTEKNELLKIWEDVFCNKATPMEYAEVLD 466
Query: 423 KLHPRYC 403
KL RYC
Sbjct: 467 KLRSRYC 473
>ref|XP_006302207.1| hypothetical protein CARUB_v10020218mg [Capsella rubella]
gi|482570917|gb|EOA35105.1| hypothetical protein
CARUB_v10020218mg [Capsella rubella]
Length = 478
Score = 339 bits (869), Expect = 2e-90
Identities = 199/439 (45%), Positives = 259/439 (58%), Gaps = 51/439 (11%)
Frame = -2
Query: 1566 KSKVTYLSN-NTSELRPS--------VNYDQLSHMSSSFMPNDNIVDAASEKDQGNEYFK 1414
K K + SN N+ + +PS NY +S +SSS + ++++D++SEK+QGNE+FK
Sbjct: 38 KQKPSNSSNLNSEKFKPSGSGQYDFVKNYSSISDLSSSLI-GESLLDSSSEKEQGNEFFK 96
Query: 1413 KKKFNEAIDCYSRSIALSPTAVAYANRAMAYLKIRRYKEAEDDCTEALNLDDRYIKAYSR 1234
+KKFNEAIDCYSRS+ALS AVAYANRAMAYLKI+RY+EAE DCTEALNLDDRYIKAYSR
Sbjct: 97 QKKFNEAIDCYSRSLALSANAVAYANRAMAYLKIKRYREAEVDCTEALNLDDRYIKAYSR 156
Query: 1233 RATARKELKKLRDSLEDVEFALRLEPQDEDLKKQRAEVKSLLE----------------- 1105
RATARKEL ++++ ED EFALRLEP E+LKKQ A +KSLLE
Sbjct: 157 RATARKELGMIKEAKEDAEFALRLEPASEELKKQYANIKSLLEKEIVEKATGAMQSTAQE 216
Query: 1104 ---------KAILAKATGNATIAALVVKEVENKAVANGHGKHVLSS-------PETSKKA 973
K L K N L VK +KA + K L PE +K
Sbjct: 217 LLKTAGLDKKTKLPKTQVNLKPVTLGVKTNSDKARPDSVRKESLGKKLIENVQPEPQEKC 276
Query: 972 GVG-----VLSDHLKSSVIXXXXXXXXXXXXXXXXXXXXXXXXXXKT----ELVATIQDL 820
G ++++ S+ + EL ++Q+L
Sbjct: 277 KEGSKKTSAITENPDSNQVMPRSQCYGKEEKSSNRNGAQSSGQGNPVSKKLELKPSVQEL 336
Query: 819 XXXXXXXXXXXXXSNIGTPNSAYEFELSWKGFSGDRSLQAHLLKVTQPERLPQIFKNALT 640
NI P SAYEFE SW+ FSGDR+LQ LLKV P LPQIFKNALT
Sbjct: 337 AAHAASLAMVEVSKNIKAPKSAYEFENSWRSFSGDRALQTQLLKVMSPNSLPQIFKNALT 396
Query: 639 APLLIDIIKCIATFFVEETELGVNYLLHLTKIPRFDMIIMCLHSADRAELCRTWDEIFLS 460
+P+L+DIIKC+A FF E+ +L V Y+ +LTK+PRF+M++MCL S ++ EL + WD++F
Sbjct: 397 SPVLVDIIKCVAVFFTEDMDLAVKYIENLTKVPRFNMLVMCLTSTEKNELMKIWDDVFCD 456
Query: 459 NATPVQHAESLNKLHPRYC 403
ATP+++AE L+KL RYC
Sbjct: 457 KATPMEYAEVLDKLKSRYC 475
>ref|XP_006302206.1| hypothetical protein CARUB_v10020218mg [Capsella rubella]
gi|482570916|gb|EOA35104.1| hypothetical protein
CARUB_v10020218mg [Capsella rubella]
Length = 468
Score = 339 bits (869), Expect = 2e-90
Identities = 199/439 (45%), Positives = 259/439 (58%), Gaps = 51/439 (11%)
Frame = -2
Query: 1566 KSKVTYLSN-NTSELRPS--------VNYDQLSHMSSSFMPNDNIVDAASEKDQGNEYFK 1414
K K + SN N+ + +PS NY +S +SSS + ++++D++SEK+QGNE+FK
Sbjct: 28 KQKPSNSSNLNSEKFKPSGSGQYDFVKNYSSISDLSSSLI-GESLLDSSSEKEQGNEFFK 86
Query: 1413 KKKFNEAIDCYSRSIALSPTAVAYANRAMAYLKIRRYKEAEDDCTEALNLDDRYIKAYSR 1234
+KKFNEAIDCYSRS+ALS AVAYANRAMAYLKI+RY+EAE DCTEALNLDDRYIKAYSR
Sbjct: 87 QKKFNEAIDCYSRSLALSANAVAYANRAMAYLKIKRYREAEVDCTEALNLDDRYIKAYSR 146
Query: 1233 RATARKELKKLRDSLEDVEFALRLEPQDEDLKKQRAEVKSLLE----------------- 1105
RATARKEL ++++ ED EFALRLEP E+LKKQ A +KSLLE
Sbjct: 147 RATARKELGMIKEAKEDAEFALRLEPASEELKKQYANIKSLLEKEIVEKATGAMQSTAQE 206
Query: 1104 ---------KAILAKATGNATIAALVVKEVENKAVANGHGKHVLSS-------PETSKKA 973
K L K N L VK +KA + K L PE +K
Sbjct: 207 LLKTAGLDKKTKLPKTQVNLKPVTLGVKTNSDKARPDSVRKESLGKKLIENVQPEPQEKC 266
Query: 972 GVG-----VLSDHLKSSVIXXXXXXXXXXXXXXXXXXXXXXXXXXKT----ELVATIQDL 820
G ++++ S+ + EL ++Q+L
Sbjct: 267 KEGSKKTSAITENPDSNQVMPRSQCYGKEEKSSNRNGAQSSGQGNPVSKKLELKPSVQEL 326
Query: 819 XXXXXXXXXXXXXSNIGTPNSAYEFELSWKGFSGDRSLQAHLLKVTQPERLPQIFKNALT 640
NI P SAYEFE SW+ FSGDR+LQ LLKV P LPQIFKNALT
Sbjct: 327 AAHAASLAMVEVSKNIKAPKSAYEFENSWRSFSGDRALQTQLLKVMSPNSLPQIFKNALT 386
Query: 639 APLLIDIIKCIATFFVEETELGVNYLLHLTKIPRFDMIIMCLHSADRAELCRTWDEIFLS 460
+P+L+DIIKC+A FF E+ +L V Y+ +LTK+PRF+M++MCL S ++ EL + WD++F
Sbjct: 387 SPVLVDIIKCVAVFFTEDMDLAVKYIENLTKVPRFNMLVMCLTSTEKNELMKIWDDVFCD 446
Query: 459 NATPVQHAESLNKLHPRYC 403
ATP+++AE L+KL RYC
Sbjct: 447 KATPMEYAEVLDKLKSRYC 465
>ref|XP_006339933.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X2
[Solanum tuberosum]
Length = 467
Score = 338 bits (868), Expect = 3e-90
Identities = 185/397 (46%), Positives = 246/397 (61%), Gaps = 12/397 (3%)
Frame = -2
Query: 1560 KVTYLSNNTSELRPSVNYDQLSHMSSSFMPNDNIVDAASEKDQGNEYFKKKKFNEAIDCY 1381
K T + + S NY+ +SH+SS + ++ ++A SEK+ GNE FK+KKFNEAIDCY
Sbjct: 70 KSTSIRSAAGPYNYSKNYNPISHLSSELISEESNINANSEKELGNECFKQKKFNEAIDCY 129
Query: 1380 SRSIALSPTAVAYANRAMAYLKIRRYKEAEDDCTEALNLDDRYIKAYSRRATARKELKKL 1201
SRSIALSPTAV+YANRAMAYLKI+R++EAE+DCTEALNLDDRYIKAYSRR+T+RKEL KL
Sbjct: 130 SRSIALSPTAVSYANRAMAYLKIKRFQEAENDCTEALNLDDRYIKAYSRRSTSRKELGKL 189
Query: 1200 RDSLEDVEFALRLEPQDEDLKKQRAEVKSLLEK------------AILAKATGNATIAAL 1057
++S+ED EFALRLEPQ+ ++KKQ EVK+L EK A A+ +G +
Sbjct: 190 KESIEDAEFALRLEPQNPEIKKQYGEVKALYEKIRKRVSGATDVSAQRAQKSGKTIKSGP 249
Query: 1056 VVKEVENKAVANGHGKHVLSSPETSKKAGVGVLSDHLKSSVIXXXXXXXXXXXXXXXXXX 877
V++ V + + + + G + D
Sbjct: 250 VIQSVSSSSQKMAEVWTIPAKENNRDVPGTAKVEDTHMQINNKDSDASPTVPTLNPAFGT 309
Query: 876 XXXXXXXXKTELVATIQDLXXXXXXXXXXXXXSNIGTPNSAYEFELSWKGFSGDRSLQAH 697
K EL ++Q+L NI PNSAY+FE+SW+G SGDR+LQ
Sbjct: 310 AKKTHKISKQELEESVQELAARAAGLAKTEAAKNIAAPNSAYQFEVSWRGLSGDRNLQTQ 369
Query: 696 LLKVTQPERLPQIFKNALTAPLLIDIIKCIATFFVEETELGVNYLLHLTKIPRFDMIIMC 517
LLKVT P LP+IFKNAL+AP+L+DI++C+ATFF+E+ L + YL LTK+PRFDMIIMC
Sbjct: 370 LLKVTSPAMLPRIFKNALSAPMLMDIVRCVATFFIEDMNLAIRYLEDLTKVPRFDMIIMC 429
Query: 516 LHSADRAELCRTWDEIFLSNATPVQHAESLNKLHPRY 406
L S D++EL + W+EIF A +H+ +L L Y
Sbjct: 430 LSSTDKSELLKIWEEIFCKEAE--EHSATLGALRVPY 464