BLASTX nr result

ID: Achyranthes23_contig00009728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00009728
         (306 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322017.2| cyclic nucleotide-gated channel C family pro...    64   2e-08
ref|XP_002317760.1| cyclic nucleotide-gated channel C family pro...    61   2e-07
ref|XP_002513573.1| Cyclic nucleotide-gated ion channel, putativ...    57   3e-06
gb|EMJ21428.1| hypothetical protein PRUPE_ppa002135mg [Prunus pe...    56   6e-06
ref|XP_002268992.1| PREDICTED: cyclic nucleotide-gated ion chann...    55   1e-05

>ref|XP_002322017.2| cyclic nucleotide-gated channel C family protein [Populus
           trichocarpa] gi|550321788|gb|EEF06144.2| cyclic
           nucleotide-gated channel C family protein [Populus
           trichocarpa]
          Length = 705

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
 Frame = +2

Query: 59  MNFEKEKFVRFQDWVPPKRVDGQFYIQDDVCFGNFRRSLGSFSDNLKRGWGAFPQSFKRI 238
           MN  +EKFVRFQDW   K  +G++   + +  G  R ++ S S+ ++RG  +   SF+RI
Sbjct: 1   MNQPQEKFVRFQDWKSEKTTEGRYSASNGIYPGKIRTTISSVSEKVQRGLESGSASFRRI 60

Query: 239 GKFLRAR-FLLEAWSKKKVLDPQ 304
            K L++  F  E  SK+K+LDPQ
Sbjct: 61  SKSLKSHSFNSEFASKQKILDPQ 83


>ref|XP_002317760.1| cyclic nucleotide-gated channel C family protein [Populus
           trichocarpa] gi|222858433|gb|EEE95980.1| cyclic
           nucleotide-gated channel C family protein [Populus
           trichocarpa]
          Length = 709

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
 Frame = +2

Query: 59  MNFEKEKFVRFQDWVPPKRVDGQFYIQDDVCFGNFRRSLGSFSDNLKRGWGAFPQSFKRI 238
           MN  +EKFVRFQDW   K  +G +   + +  G  R ++ S S+  +RG  +   SF +I
Sbjct: 1   MNHPQEKFVRFQDWKSEKSTEGNYSASNVMYPGKIRTTISSVSEKFQRGLESGSSSFNKI 60

Query: 239 GKFLRA-RFLLEAWSKKKVLDPQ 304
            K L++  F  E  S+KK+LDPQ
Sbjct: 61  RKSLKSYSFNSEVASRKKILDPQ 83


>ref|XP_002513573.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223547481|gb|EEF48976.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 838

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
 Frame = +2

Query: 59  MNFEKEKFVRFQDWVPPKRVDGQFYIQDDVCFGNFRRSLGSFSDNLKRGWGAFPQSFKRI 238
           MN+ +EKFVRFQDW   K ++ Q+ + D +     R S+ S S+  +RG  +  +  KRI
Sbjct: 1   MNYSQEKFVRFQDWRSEKSMETQYSVSDGIHSRKIRMSITSVSEKFQRGLESGSERIKRI 60

Query: 239 GKFLRARFLLEAWSK-----KKVLDPQ 304
            K L++     A +K      K+LDPQ
Sbjct: 61  RKSLKSYSFGSAVTKGLNSGNKILDPQ 87


>gb|EMJ21428.1| hypothetical protein PRUPE_ppa002135mg [Prunus persica]
          Length = 711

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/82 (35%), Positives = 45/82 (54%)
 Frame = +2

Query: 59  MNFEKEKFVRFQDWVPPKRVDGQFYIQDDVCFGNFRRSLGSFSDNLKRGWGAFPQSFKRI 238
           MNF +EKFVRFQDW   K+V+  +   D++  G FRR++ S S   +RG  +  +  K+ 
Sbjct: 1   MNFHQEKFVRFQDWTSEKKVEPLYSPDDEIHAGKFRRTIHSVSMKFQRGLESGSERIKKS 60

Query: 239 GKFLRARFLLEAWSKKKVLDPQ 304
            K      ++      ++LDPQ
Sbjct: 61  WKSYSFDGVIAKSFGSRILDPQ 82


>ref|XP_002268992.1| PREDICTED: cyclic nucleotide-gated ion channel 1 [Vitis vinifera]
           gi|302143681|emb|CBI22542.3| unnamed protein product
           [Vitis vinifera]
          Length = 709

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
 Frame = +2

Query: 59  MNFEKEKFVRFQDWVPPKRVDGQFYIQDDVCFGNFRRSLGSFSDNLKRGWGAFPQSFKRI 238
           MN+ +EKFVRFQDW   +  +G+  I + V  G  R ++ S S   +RG     +    I
Sbjct: 1   MNYRQEKFVRFQDWSSERSSEGKIPINNGVRSGKIRLAINSVSGKFQRGLECGSERINSI 60

Query: 239 GKFLRA---RFLLEAWSKKKVLDPQ 304
            + L++   R  LE  S KK+LDPQ
Sbjct: 61  RRSLKSFSFRRNLEKGSGKKILDPQ 85


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