BLASTX nr result
ID: Achyranthes23_contig00009538
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00009538
(2263 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY00734.1| RNA-binding family protein isoform 1 [Theobroma c... 306 3e-80
ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268... 302 5e-79
ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec... 300 1e-78
ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr... 300 2e-78
gb|EOY00741.1| RNA-binding family protein isoform 6 [Theobroma c... 300 2e-78
gb|EOY00740.1| RNA-binding family protein isoform 5, partial [Th... 300 2e-78
gb|EOY00739.1| RNA-binding family protein isoform 4 [Theobroma c... 300 2e-78
gb|EOY00736.1| RNA-binding family protein isoform 1 [Theobroma c... 300 2e-78
ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr... 297 1e-77
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec... 296 3e-77
ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309... 295 4e-77
gb|EXB82464.1| Cleavage and polyadenylation specificity factor s... 290 2e-75
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu... 288 7e-75
gb|EMJ26876.1| hypothetical protein PRUPE_ppa002814mg [Prunus pe... 278 6e-72
ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec... 276 2e-71
gb|EPS60955.1| hypothetical protein M569_13847, partial [Genlise... 253 3e-64
ref|XP_002312652.1| RNA recognition motif-containing family prot... 248 8e-63
ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Popu... 241 8e-61
ref|XP_002315647.1| RNA recognition motif-containing family prot... 241 8e-61
ref|XP_006417146.1| hypothetical protein EUTSA_v10007191mg [Eutr... 237 1e-59
>gb|EOY00734.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508708838|gb|EOY00735.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 653
Score = 306 bits (783), Expect = 3e-80
Identities = 171/339 (50%), Positives = 211/339 (62%), Gaps = 26/339 (7%)
Frame = -1
Query: 2044 MDPAAEEQIDYGDEEYGGARKVQYQSSGAIPALADEEMIGXXXXXXXXXDGVNVGEGFLQ 1865
MD AEEQID+GDEEYGGA+K+QYQ SGAIPALADEEM+G + VNVGEGFLQ
Sbjct: 1 MDAMAEEQIDFGDEEYGGAQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 1864 FHRNEAQVPPSNVGNGVVQARTFNAPQPRQXXXXXXXXXXXXXXXXXR------------ 1721
R+EA P +G+ +QA+ AP+PR +
Sbjct: 61 LQRSEAPPQPGGMGSTGLQAQKNEAPEPRGEAGGSQGLNIPGVSVQGKHLNVTARYPEQD 120
Query: 1720 -QHDASLSELGSANHISG-ALGQDKRI----HDVSLGNVSFQGPAHVAQNTATNAQDV-- 1565
Q S E+GS ++ SG ++ Q R+ D + N+ FQG + + + V
Sbjct: 121 GQPAVSRPEMGSGSYPSGTSISQKGRVMEGTQDTQVKNMGFQGLSSASHKVGIDPSGVPQ 180
Query: 1564 ------GKATNPVIGGPSASQGIVNNQMTANANMGADHMMVNDNIIRPQMDNGPTMLFVG 1403
++ N GGP + + NQM N N H M+++N +RP ++NGPTMLFVG
Sbjct: 181 KIANVPAQSLNSGTGGPQGAPHVPPNQMGLNVN----HPMISENQVRPPIENGPTMLFVG 236
Query: 1402 ELHWWTTDAELESVLSQYGKVKEIKFFDERASGKSKGYCQVEFYDAGAAATCKEGMNGHI 1223
ELHWWTTDAELESVLSQYG+VKEIKFFDERASGKSKGYCQVEFYD +AA CKEGM+G++
Sbjct: 237 ELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPASAAACKEGMDGYM 296
Query: 1222 FNGRACVVAFASPQTLKQMGAAYASKNXXXXXXXXQGRR 1106
FNGRACVVAFASPQTLKQMGA+Y +KN QGRR
Sbjct: 297 FNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRR 335
Score = 216 bits (549), Expect = 4e-53
Identities = 114/221 (51%), Positives = 131/221 (59%), Gaps = 3/221 (1%)
Frame = -1
Query: 829 FDPSFMGRGAGYGGFSGPAFPGMMSPFPAVNPMGLAGVAPHVNPAFFXXXXXXXXXXXXX 650
FDP++MGRG YGGF GP FPGM+ FPAVN +GLAGVAPHVNPAFF
Sbjct: 434 FDPTYMGRGGSYGGFPGPGFPGMLPSFPAVNTLGLAGVAPHVNPAFFGRGMAPNGMGMMG 493
Query: 649 XXXXXGHPSGMWGDAGMGGWPVEEHGQKTRESSYGGDDGASEYGYGEGNPEKSSRTNAAP 470
G GMW D MGGW +EHG++TRESSYGG+DGASEYGYG+ N EK R++ A
Sbjct: 494 GPGMDGPHVGMWTDTSMGGWGGDEHGRRTRESSYGGEDGASEYGYGDANHEK-GRSSGAS 552
Query: 469 REKERASEREWSGNS---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHRLKERDSGYED 299
REKER S+REWSGNS +HR +ERD Y+D
Sbjct: 553 REKERVSDREWSGNSDRRHRDEKERDWDRSEREHREHRYREEKDSYREHRHRERDLDYDD 612
Query: 298 DWDRGQXXXXXXXXXRAMQEDDHRSRSRDVEYGKRRRAPSE 176
D DRGQ AM E+ RSRSRDV+YGKRRR PSE
Sbjct: 613 DLDRGQSSSRSRRRSHAMPEEQRRSRSRDVDYGKRRRLPSE 653
>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
uncharacterized protein LOC100268141 isoform 2 [Vitis
vinifera]
Length = 647
Score = 302 bits (773), Expect = 5e-79
Identities = 174/338 (51%), Positives = 209/338 (61%), Gaps = 25/338 (7%)
Frame = -1
Query: 2032 AEEQIDYGDEEYGGARKVQYQSSGAIPALADEEMIGXXXXXXXXXDGVNVGEGFLQFHRN 1853
AEEQ+DY DEEYGGA+K+ +Q GAI ALAD+E++G + VNVGEGFLQ HR+
Sbjct: 2 AEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHRS 61
Query: 1852 EAQVPPSNVGNGVVQARTFNAPQPRQXXXXXXXXXXXXXXXXXRQHDASLSE-------- 1697
EA P + G QA + P + + + E
Sbjct: 62 EAPAPSGVMAGGPFQAHKTDVPPQKLEAGTSQGLIIPGVSIEGKYSNPHFHEKKEGPMAV 121
Query: 1696 ----LGSANHISG-ALGQDKRI----HDVSLGNVSFQGPAHVAQNTATNAQDV-GKATN- 1550
+GS +H+ G ++ Q R+ HD + N+ FQG + Q T DV GK N
Sbjct: 122 KGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVHGKIANE 181
Query: 1549 --PVI----GGPSASQGIVNNQMTANANMGADHMMVNDNIIRPQMDNGPTMLFVGELHWW 1388
PV+ GGP A +++NQM N N+ + MVN+N IRP +DNG TMLFVGELHWW
Sbjct: 182 STPVLNSGTGGPRAVPQMLSNQMGMNVNV--NRPMVNENQIRPAVDNGATMLFVGELHWW 239
Query: 1387 TTDAELESVLSQYGKVKEIKFFDERASGKSKGYCQVEFYDAGAAATCKEGMNGHIFNGRA 1208
TTDAELESVLSQYG+VKEIKFFDERASGKSKGYCQVEFYDA AAA CKEGMNG+IFNGRA
Sbjct: 240 TTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDASAAAACKEGMNGYIFNGRA 299
Query: 1207 CVVAFASPQTLKQMGAAYASKNXXXXXXXXQGRRNTND 1094
CVVAFASPQTLKQMGA+Y +K QGRR ND
Sbjct: 300 CVVAFASPQTLKQMGASYMNKT--QAQSQSQGRRPMND 335
Score = 238 bits (607), Expect = 8e-60
Identities = 122/218 (55%), Positives = 136/218 (62%)
Frame = -1
Query: 829 FDPSFMGRGAGYGGFSGPAFPGMMSPFPAVNPMGLAGVAPHVNPAFFXXXXXXXXXXXXX 650
FDP++MGRG YGGFSG AFPGM+ FPAVN MGLAGVAPHVNPAFF
Sbjct: 430 FDPTYMGRGGAYGGFSGSAFPGMVPSFPAVNTMGLAGVAPHVNPAFFGRGMAANGMGMMG 489
Query: 649 XXXXXGHPSGMWGDAGMGGWPVEEHGQKTRESSYGGDDGASEYGYGEGNPEKSSRTNAAP 470
GH +GMW D MGGW EEHG++TRESSYGGDDGAS+YGYGE N EK R+N A
Sbjct: 490 ATGMDGHHAGMWTDTSMGGWGGEEHGRRTRESSYGGDDGASDYGYGEVNHEKVGRSNTAS 549
Query: 469 REKERASEREWSGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHRLKERDSGYEDDWD 290
REKER SER+WSGNS DHR +ERD EDDWD
Sbjct: 550 REKERGSERDWSGNSERRHRDEREQDWERSDKDHRYREEKDGYRDHRQRERDFNNEDDWD 609
Query: 289 RGQXXXXXXXXXRAMQEDDHRSRSRDVEYGKRRRAPSE 176
RGQ RA+ ++DHRSRSRD +YGKRRR PSE
Sbjct: 610 RGQSSSRSRSRSRAVADEDHRSRSRDGDYGKRRRLPSE 647
>ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 658
Score = 300 bits (769), Expect = 1e-78
Identities = 173/343 (50%), Positives = 212/343 (61%), Gaps = 26/343 (7%)
Frame = -1
Query: 2044 MDPAAEEQIDYGDEEYGGARKVQYQSSGAIPALADEEMIGXXXXXXXXXDGVNVGEGFLQ 1865
MD AEEQIDY +EEYGGA+K+QYQ GAIPALADEE++G + VNVG+G LQ
Sbjct: 1 MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60
Query: 1864 FHRNEAQVPPSNVGNGVVQARTFNAPQPRQXXXXXXXXXXXXXXXXXR----------QH 1715
F + EA P + VGNG +Q + + P+ + + Q+
Sbjct: 61 FQQPEAPPPSAGVGNGRLQVKKTDVPEQQVQAGVSQGSNVPGVSVEGKYTNAGTHFPAQN 120
Query: 1714 DASLS----ELGSANHISGALGQDK-----RIHDVSLGNVSFQGPAHVAQNTATNAQDV- 1565
D ++ +GS N+ GA K HD + N+ FQG T + ++
Sbjct: 121 DVQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMP 180
Query: 1564 GKATN---PVIG-GPSASQG--IVNNQMTANANMGADHMMVNDNIIRPQMDNGPTMLFVG 1403
G+ N PV+ G + QG I NQM N N+ + MVN+N IRP ++NG TMLFVG
Sbjct: 181 GRVANEPAPVLNPGAAGPQGALIPANQMGVNINV--NRAMVNENQIRPPLENGGTMLFVG 238
Query: 1402 ELHWWTTDAELESVLSQYGKVKEIKFFDERASGKSKGYCQVEFYDAGAAATCKEGMNGHI 1223
ELHWWTTDAELESVLSQYG+VKEIKFFDERASGKSKGYCQVEF+DA AAA CK+GMNGH+
Sbjct: 239 ELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHV 298
Query: 1222 FNGRACVVAFASPQTLKQMGAAYASKNXXXXXXXXQGRRNTND 1094
FNGR CVVAFASPQTLKQMGA+Y +KN QGRR ND
Sbjct: 299 FNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQTQGRRPMND 341
Score = 230 bits (587), Expect = 2e-57
Identities = 117/221 (52%), Positives = 138/221 (62%), Gaps = 3/221 (1%)
Frame = -1
Query: 829 FDPSFMGRGAGYGGFSGPAFPGMMSPFPAVNPMGLAGVAPHVNPAFFXXXXXXXXXXXXX 650
FDP++MGRG GYGGFSGP FPGM+ FPAVN MGLAGVAPHVNPAFF
Sbjct: 438 FDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNRGMAANGMGMMG 497
Query: 649 XXXXXGHPSGMWGDAGMGGWPVEEHGQKTRESSYGGDDGASEYGYGEGNPEKSSRTNAAP 470
G GMW D+ MGGW EEHG++TRESSYGGDDGAS+YGYGE N EK +R+ AA
Sbjct: 498 SSGMDGPHPGMWTDSSMGGWLGEEHGRRTRESSYGGDDGASDYGYGEANHEKGARSTAAS 557
Query: 469 REKERASEREWSGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDH---RLKERDSGYED 299
REK+R SER+WSGN+ + R ++RDS Y+D
Sbjct: 558 REKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDRRQRDRDSTYDD 617
Query: 298 DWDRGQXXXXXXXXXRAMQEDDHRSRSRDVEYGKRRRAPSE 176
+WDRG RA+ ++DHRSRSRDV+YGKRRR PSE
Sbjct: 618 NWDRGPSSSRSRSRSRAIPDEDHRSRSRDVDYGKRRRLPSE 658
>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
gi|557540375|gb|ESR51419.1| hypothetical protein
CICLE_v10030915mg [Citrus clementina]
Length = 658
Score = 300 bits (768), Expect = 2e-78
Identities = 173/343 (50%), Positives = 212/343 (61%), Gaps = 26/343 (7%)
Frame = -1
Query: 2044 MDPAAEEQIDYGDEEYGGARKVQYQSSGAIPALADEEMIGXXXXXXXXXDGVNVGEGFLQ 1865
MD AEEQIDY +EEYGGA+K+QYQ GAIPALADEE++G + VNVG+G LQ
Sbjct: 1 MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60
Query: 1864 FHRNEAQVPPSNVGNGVVQARTFNAPQPRQXXXXXXXXXXXXXXXXXR----------QH 1715
F + EA P + VGNG +Q + + P+ + + Q+
Sbjct: 61 FQQPEAPPPSAGVGNGRLQVKKTDVPEQQVQAGVSQGSNVPGVSVEGKYTNAGTHFPAQN 120
Query: 1714 DASLS----ELGSANHISGALGQDK-----RIHDVSLGNVSFQGPAHVAQNTATNAQDV- 1565
D ++ +GS N+ GA K HD + N+ FQG T + ++
Sbjct: 121 DVQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPPRTGVDPSNMP 180
Query: 1564 GKATN---PVIG-GPSASQG--IVNNQMTANANMGADHMMVNDNIIRPQMDNGPTMLFVG 1403
G+ N PV+ G + QG I NQM N N+ + MVN+N IRP ++NG TMLFVG
Sbjct: 181 GRVANEPAPVLNPGAAGPQGALIPANQMGVNINV--NRAMVNENQIRPPLENGGTMLFVG 238
Query: 1402 ELHWWTTDAELESVLSQYGKVKEIKFFDERASGKSKGYCQVEFYDAGAAATCKEGMNGHI 1223
ELHWWTTDAELESVLSQYG+VKEIKFFDERASGKSKGYCQVEF+DA AAA CK+GMNGH+
Sbjct: 239 ELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHV 298
Query: 1222 FNGRACVVAFASPQTLKQMGAAYASKNXXXXXXXXQGRRNTND 1094
FNGR CVVAFASPQTLKQMGA+Y +KN QGRR ND
Sbjct: 299 FNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQTQGRRPMND 341
Score = 231 bits (588), Expect = 1e-57
Identities = 117/221 (52%), Positives = 138/221 (62%), Gaps = 3/221 (1%)
Frame = -1
Query: 829 FDPSFMGRGAGYGGFSGPAFPGMMSPFPAVNPMGLAGVAPHVNPAFFXXXXXXXXXXXXX 650
FDP++MGRG GYGGFSGP FPGM+ FPAVN MGLAGVAPHVNPAFF
Sbjct: 438 FDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNRGMAANGMGMMG 497
Query: 649 XXXXXGHPSGMWGDAGMGGWPVEEHGQKTRESSYGGDDGASEYGYGEGNPEKSSRTNAAP 470
G GMW D+ MGGW EEHG++TRESSYGGDDGAS+YGYGE N EK +R+ AA
Sbjct: 498 SSGMDGPHPGMWTDSSMGGWVGEEHGRRTRESSYGGDDGASDYGYGEANHEKGARSTAAS 557
Query: 469 REKERASEREWSGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDH---RLKERDSGYED 299
REK+R SER+WSGN+ + R ++RDS Y+D
Sbjct: 558 REKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDRRQRDRDSTYDD 617
Query: 298 DWDRGQXXXXXXXXXRAMQEDDHRSRSRDVEYGKRRRAPSE 176
+WDRG RA+ ++DHRSRSRDV+YGKRRR PSE
Sbjct: 618 NWDRGPSSSRSRSRSRAIPDEDHRSRSRDVDYGKRRRLPSE 658
>gb|EOY00741.1| RNA-binding family protein isoform 6 [Theobroma cacao]
Length = 602
Score = 300 bits (767), Expect = 2e-78
Identities = 166/339 (48%), Positives = 207/339 (61%), Gaps = 26/339 (7%)
Frame = -1
Query: 2044 MDPAAEEQIDYGDEEYGGARKVQYQSSGAIPALADEEMIGXXXXXXXXXDGVNVGEGFLQ 1865
MD AEEQID+GDEEYGG +K+QYQ SGAIPALADEEM+G + VNVGEGFLQ
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 1864 FHRNEAQVPPSNVGNGVVQARTFNAPQPRQXXXXXXXXXXXXXXXXXRQHDASLS----- 1700
R+EA + P +G+ ++A+ AP+PR + + S
Sbjct: 61 LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYPEKE 120
Query: 1699 --------ELGSANHISGALGQDKR-----IHDVSLGNVSFQGPAHVAQNTATN------ 1577
E+ S ++ SG+ K HD + N+ FQG + +
Sbjct: 121 EQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVPQ 180
Query: 1576 --AQDVGKATNPVIGGPSASQGIVNNQMTANANMGADHMMVNDNIIRPQMDNGPTMLFVG 1403
A D ++ N GGP + NQM N N H ++N+N ++P ++NGPTMLFVG
Sbjct: 181 KIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVN----HPVMNENQVQPPIENGPTMLFVG 236
Query: 1402 ELHWWTTDAELESVLSQYGKVKEIKFFDERASGKSKGYCQVEFYDAGAAATCKEGMNGHI 1223
ELHWWTTDAELESVLSQYG++KEIKFFDE+ASGKSKGYCQVEFYD +AA CKEGMNG++
Sbjct: 237 ELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYM 296
Query: 1222 FNGRACVVAFASPQTLKQMGAAYASKNXXXXXXXXQGRR 1106
FNGRACVVAFASPQTLKQMGA+Y +KN QGRR
Sbjct: 297 FNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRR 335
Score = 177 bits (449), Expect = 2e-41
Identities = 86/135 (63%), Positives = 97/135 (71%)
Frame = -1
Query: 829 FDPSFMGRGAGYGGFSGPAFPGMMSPFPAVNPMGLAGVAPHVNPAFFXXXXXXXXXXXXX 650
FDP++M RG GYGGF GP FPGM+ FPAVN MGLAGVAPHVNPAFF
Sbjct: 433 FDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGRGMAPNGMGMMG 492
Query: 649 XXXXXGHPSGMWGDAGMGGWPVEEHGQKTRESSYGGDDGASEYGYGEGNPEKSSRTNAAP 470
G +GMW DA MGGW +EHG++TRESSYGG+DGASEYGYG+ N EK R++ A
Sbjct: 493 ASGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDANHEK-GRSSGAS 551
Query: 469 REKERASEREWSGNS 425
REKER SEREWSGNS
Sbjct: 552 REKERVSEREWSGNS 566
>gb|EOY00740.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
Length = 656
Score = 300 bits (767), Expect = 2e-78
Identities = 166/339 (48%), Positives = 207/339 (61%), Gaps = 26/339 (7%)
Frame = -1
Query: 2044 MDPAAEEQIDYGDEEYGGARKVQYQSSGAIPALADEEMIGXXXXXXXXXDGVNVGEGFLQ 1865
MD AEEQID+GDEEYGG +K+QYQ SGAIPALADEEM+G + VNVGEGFLQ
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 1864 FHRNEAQVPPSNVGNGVVQARTFNAPQPRQXXXXXXXXXXXXXXXXXRQHDASLS----- 1700
R+EA + P +G+ ++A+ AP+PR + + S
Sbjct: 61 LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYPEKE 120
Query: 1699 --------ELGSANHISGALGQDKR-----IHDVSLGNVSFQGPAHVAQNTATN------ 1577
E+ S ++ SG+ K HD + N+ FQG + +
Sbjct: 121 EQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVPQ 180
Query: 1576 --AQDVGKATNPVIGGPSASQGIVNNQMTANANMGADHMMVNDNIIRPQMDNGPTMLFVG 1403
A D ++ N GGP + NQM N N H ++N+N ++P ++NGPTMLFVG
Sbjct: 181 KIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVN----HPVMNENQVQPPIENGPTMLFVG 236
Query: 1402 ELHWWTTDAELESVLSQYGKVKEIKFFDERASGKSKGYCQVEFYDAGAAATCKEGMNGHI 1223
ELHWWTTDAELESVLSQYG++KEIKFFDE+ASGKSKGYCQVEFYD +AA CKEGMNG++
Sbjct: 237 ELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYM 296
Query: 1222 FNGRACVVAFASPQTLKQMGAAYASKNXXXXXXXXQGRR 1106
FNGRACVVAFASPQTLKQMGA+Y +KN QGRR
Sbjct: 297 FNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRR 335
Score = 211 bits (538), Expect = 8e-52
Identities = 111/216 (51%), Positives = 129/216 (59%), Gaps = 3/216 (1%)
Frame = -1
Query: 829 FDPSFMGRGAGYGGFSGPAFPGMMSPFPAVNPMGLAGVAPHVNPAFFXXXXXXXXXXXXX 650
FDP++M RG GYGGF GP FPGM+ FPAVN MGLAGVAPHVNPAFF
Sbjct: 433 FDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGRGMAPNGMGMMG 492
Query: 649 XXXXXGHPSGMWGDAGMGGWPVEEHGQKTRESSYGGDDGASEYGYGEGNPEKSSRTNAAP 470
G +GMW DA MGGW +EHG++TRESSYGG+DGASEYGYG+ N EK R++ A
Sbjct: 493 ASGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDANHEK-GRSSGAS 551
Query: 469 REKERASEREWSGNS---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHRLKERDSGYED 299
REKER SEREWSGNS +HR +ERD Y+D
Sbjct: 552 REKERVSEREWSGNSDRRHRDEKEQDWDRSEREHREHRYREEKDSYREHRHRERDLDYDD 611
Query: 298 DWDRGQXXXXXXXXXRAMQEDDHRSRSRDVEYGKRR 191
DWDRGQ AM E++HRSRSRDV Y + +
Sbjct: 612 DWDRGQSSSRSRRRSHAMPEEEHRSRSRDVGYREEK 647
>gb|EOY00739.1| RNA-binding family protein isoform 4 [Theobroma cacao]
Length = 697
Score = 300 bits (767), Expect = 2e-78
Identities = 166/339 (48%), Positives = 207/339 (61%), Gaps = 26/339 (7%)
Frame = -1
Query: 2044 MDPAAEEQIDYGDEEYGGARKVQYQSSGAIPALADEEMIGXXXXXXXXXDGVNVGEGFLQ 1865
MD AEEQID+GDEEYGG +K+QYQ SGAIPALADEEM+G + VNVGEGFLQ
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 1864 FHRNEAQVPPSNVGNGVVQARTFNAPQPRQXXXXXXXXXXXXXXXXXRQHDASLS----- 1700
R+EA + P +G+ ++A+ AP+PR + + S
Sbjct: 61 LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYPEKE 120
Query: 1699 --------ELGSANHISGALGQDKR-----IHDVSLGNVSFQGPAHVAQNTATN------ 1577
E+ S ++ SG+ K HD + N+ FQG + +
Sbjct: 121 EQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVPQ 180
Query: 1576 --AQDVGKATNPVIGGPSASQGIVNNQMTANANMGADHMMVNDNIIRPQMDNGPTMLFVG 1403
A D ++ N GGP + NQM N N H ++N+N ++P ++NGPTMLFVG
Sbjct: 181 KIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVN----HPVMNENQVQPPIENGPTMLFVG 236
Query: 1402 ELHWWTTDAELESVLSQYGKVKEIKFFDERASGKSKGYCQVEFYDAGAAATCKEGMNGHI 1223
ELHWWTTDAELESVLSQYG++KEIKFFDE+ASGKSKGYCQVEFYD +AA CKEGMNG++
Sbjct: 237 ELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYM 296
Query: 1222 FNGRACVVAFASPQTLKQMGAAYASKNXXXXXXXXQGRR 1106
FNGRACVVAFASPQTLKQMGA+Y +KN QGRR
Sbjct: 297 FNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRR 335
Score = 194 bits (492), Expect = 2e-46
Identities = 118/266 (44%), Positives = 134/266 (50%), Gaps = 48/266 (18%)
Frame = -1
Query: 829 FDPSFMGRGAGYGGFSGPAFPGMMSPFPAVNPMGLAGVAPHVNPAFFXXXXXXXXXXXXX 650
FDP++M RG GYGGF GP FPGM+ FPAVN MGLAGVAPHVNPAFF
Sbjct: 433 FDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGRGMAPNGMGMMG 492
Query: 649 XXXXXGHPSGMWGDAGMGGWPVEEHGQKTRESSYGGDDGASEYGYGEGNPEKSSRTNAAP 470
G +GMW DA MGGW +EHG++TRESSYGG+DGASEYGYG+ N EK R++ A
Sbjct: 493 ASGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDANHEK-GRSSGAS 551
Query: 469 REKERASEREWSGNS---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHRLKERD-SGYE 302
REKER SEREWSGNS +HR +ER+ SG
Sbjct: 552 REKERVSEREWSGNSDRRHRDEKEQDWDRSEREHREHRYREEKDSYREHRHREREWSGNS 611
Query: 301 D---------DWD-----------------------------------RGQXXXXXXXXX 254
D DWD RGQ
Sbjct: 612 DRRHRDEKERDWDRSEREHREHRYREEKDSYREHRHRERDLDYDDDLDRGQSSSRSRRRS 671
Query: 253 RAMQEDDHRSRSRDVEYGKRRRAPSE 176
AM E+ RSRSRDV+YGKRRR PSE
Sbjct: 672 HAMPEEQRRSRSRDVDYGKRRRLPSE 697
>gb|EOY00736.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508708840|gb|EOY00737.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708841|gb|EOY00738.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 652
Score = 300 bits (767), Expect = 2e-78
Identities = 166/339 (48%), Positives = 207/339 (61%), Gaps = 26/339 (7%)
Frame = -1
Query: 2044 MDPAAEEQIDYGDEEYGGARKVQYQSSGAIPALADEEMIGXXXXXXXXXDGVNVGEGFLQ 1865
MD AEEQID+GDEEYGG +K+QYQ SGAIPALADEEM+G + VNVGEGFLQ
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 1864 FHRNEAQVPPSNVGNGVVQARTFNAPQPRQXXXXXXXXXXXXXXXXXRQHDASLS----- 1700
R+EA + P +G+ ++A+ AP+PR + + S
Sbjct: 61 LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYPEKE 120
Query: 1699 --------ELGSANHISGALGQDKR-----IHDVSLGNVSFQGPAHVAQNTATN------ 1577
E+ S ++ SG+ K HD + N+ FQG + +
Sbjct: 121 EQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVPQ 180
Query: 1576 --AQDVGKATNPVIGGPSASQGIVNNQMTANANMGADHMMVNDNIIRPQMDNGPTMLFVG 1403
A D ++ N GGP + NQM N N H ++N+N ++P ++NGPTMLFVG
Sbjct: 181 KIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVN----HPVMNENQVQPPIENGPTMLFVG 236
Query: 1402 ELHWWTTDAELESVLSQYGKVKEIKFFDERASGKSKGYCQVEFYDAGAAATCKEGMNGHI 1223
ELHWWTTDAELESVLSQYG++KEIKFFDE+ASGKSKGYCQVEFYD +AA CKEGMNG++
Sbjct: 237 ELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYM 296
Query: 1222 FNGRACVVAFASPQTLKQMGAAYASKNXXXXXXXXQGRR 1106
FNGRACVVAFASPQTLKQMGA+Y +KN QGRR
Sbjct: 297 FNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRR 335
Score = 227 bits (579), Expect = 1e-56
Identities = 118/221 (53%), Positives = 136/221 (61%), Gaps = 3/221 (1%)
Frame = -1
Query: 829 FDPSFMGRGAGYGGFSGPAFPGMMSPFPAVNPMGLAGVAPHVNPAFFXXXXXXXXXXXXX 650
FDP++M RG GYGGF GP FPGM+ FPAVN MGLAGVAPHVNPAFF
Sbjct: 433 FDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGRGMAPNGMGMMG 492
Query: 649 XXXXXGHPSGMWGDAGMGGWPVEEHGQKTRESSYGGDDGASEYGYGEGNPEKSSRTNAAP 470
G +GMW DA MGGW +EHG++TRESSYGG+DGASEYGYG+ N EK R++ A
Sbjct: 493 ASGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDANHEK-GRSSGAS 551
Query: 469 REKERASEREWSGNS---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHRLKERDSGYED 299
REKER SEREWSGNS +HR +ERD Y+D
Sbjct: 552 REKERVSEREWSGNSDRRHRDEKEQDWDRSEREHREHRYREEKDSYREHRHRERDLDYDD 611
Query: 298 DWDRGQXXXXXXXXXRAMQEDDHRSRSRDVEYGKRRRAPSE 176
DWDRGQ AM E++HRSRSRDV+YGK+RR PSE
Sbjct: 612 DWDRGQSSSRSRRRSHAMPEEEHRSRSRDVDYGKKRRLPSE 652
>ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina]
gi|567891321|ref|XP_006438181.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540376|gb|ESR51420.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540377|gb|ESR51421.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
Length = 655
Score = 297 bits (761), Expect = 1e-77
Identities = 170/339 (50%), Positives = 210/339 (61%), Gaps = 26/339 (7%)
Frame = -1
Query: 2032 AEEQIDYGDEEYGGARKVQYQSSGAIPALADEEMIGXXXXXXXXXDGVNVGEGFLQFHRN 1853
AEEQIDY ++EYGGA+K+QYQ GAIPALADEE++G + +NVG+G LQF +
Sbjct: 2 AEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDINVGDGLLQFQQP 61
Query: 1852 EAQVPPSNVGNGVVQARTFNAPQPRQ----------XXXXXXXXXXXXXXXXXRQHDASL 1703
EA P + VGNG +Q + + P+ R Q+D +
Sbjct: 62 EAPPPSAGVGNGRLQVKKTDVPEQRVQVGGSQGSNIPGVSVEGKYTNAGSDFPAQNDVQV 121
Query: 1702 S----ELGSANHISGALGQDK-----RIHDVSLGNVSFQGPAHVAQNTATNAQDV-GKAT 1553
+ +GS N+ GA K HD + N+ FQG T + ++ G+A
Sbjct: 122 AVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGRAA 181
Query: 1552 N---PVIG-GPSASQG--IVNNQMTANANMGADHMMVNDNIIRPQMDNGPTMLFVGELHW 1391
N PV+ G + QG I NQM NAN+ + +MVN+N IRP ++NG TMLFVGELHW
Sbjct: 182 NEPAPVLNPGAAGPQGALIPANQMGVNANV--NRVMVNENQIRPPLENGGTMLFVGELHW 239
Query: 1390 WTTDAELESVLSQYGKVKEIKFFDERASGKSKGYCQVEFYDAGAAATCKEGMNGHIFNGR 1211
WTTDAELESVLSQYG+ KEIKFFDERASGKSKGYCQVEF+DA AAA CK+GMNGH+FNGR
Sbjct: 240 WTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFNGR 299
Query: 1210 ACVVAFASPQTLKQMGAAYASKNXXXXXXXXQGRRNTND 1094
CVVAFASPQTLKQMGA+Y +KN QG R ND
Sbjct: 300 PCVVAFASPQTLKQMGASYMNKNQGQPQSQNQGSRPMND 338
Score = 229 bits (585), Expect = 3e-57
Identities = 115/221 (52%), Positives = 137/221 (61%), Gaps = 3/221 (1%)
Frame = -1
Query: 829 FDPSFMGRGAGYGGFSGPAFPGMMSPFPAVNPMGLAGVAPHVNPAFFXXXXXXXXXXXXX 650
FDP++MGRG GYGGFSGP FPGM+ FPAVN MGLAGVAPHVNPAFF
Sbjct: 435 FDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNRGMAANGMGMMG 494
Query: 649 XXXXXGHPSGMWGDAGMGGWPVEEHGQKTRESSYGGDDGASEYGYGEGNPEKSSRTNAAP 470
G GMW D+ MGGW EEHG++TRESSYGGDDGAS+YGYGE + EK +R+ A
Sbjct: 495 SSGMDGPHPGMWTDSSMGGWVGEEHGRRTRESSYGGDDGASDYGYGEASHEKGARSTTAS 554
Query: 469 REKERASEREWSGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDH---RLKERDSGYED 299
REK+R SER+WSGN+ + R ++RDS Y+D
Sbjct: 555 REKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDRRQRDRDSTYDD 614
Query: 298 DWDRGQXXXXXXXXXRAMQEDDHRSRSRDVEYGKRRRAPSE 176
+WDRGQ A+ ++DHRSRSRDV+YGKRRR PSE
Sbjct: 615 NWDRGQSSSRSRSRSGAIPDEDHRSRSRDVDYGKRRRLPSE 655
>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 655
Score = 296 bits (758), Expect = 3e-77
Identities = 170/339 (50%), Positives = 210/339 (61%), Gaps = 26/339 (7%)
Frame = -1
Query: 2032 AEEQIDYGDEEYGGARKVQYQSSGAIPALADEEMIGXXXXXXXXXDGVNVGEGFLQFHRN 1853
AEEQIDY ++EYGGA+K+QYQ GAIPALADEE++G + VNVG+G LQF +
Sbjct: 2 AEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQP 61
Query: 1852 EAQVPPSNVGNGVVQARTFNAPQPRQXXXXXXXXXXXXXXXXXR----------QHDASL 1703
EA P + VGNG +Q + + P+ R + Q+D +
Sbjct: 62 EAPPPSAGVGNGRLQVKKTDVPEQRVQVGGSQGSNIPGVSVEGKYTNAGSHFPAQNDVQV 121
Query: 1702 S----ELGSANHISGALGQDK-----RIHDVSLGNVSFQGPAHVAQNTATNAQDV-GKAT 1553
+ +GS N+ GA K HD + N+ FQG T + ++ G+
Sbjct: 122 AVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGRVA 181
Query: 1552 N---PVIG-GPSASQG--IVNNQMTANANMGADHMMVNDNIIRPQMDNGPTMLFVGELHW 1391
N PV+ G + QG I NQM NAN+ + +MVN+N IRP ++NG TMLFVGELHW
Sbjct: 182 NEPAPVLNPGAAGPQGALIPANQMGVNANV--NRVMVNENQIRPPLENGGTMLFVGELHW 239
Query: 1390 WTTDAELESVLSQYGKVKEIKFFDERASGKSKGYCQVEFYDAGAAATCKEGMNGHIFNGR 1211
WTTDAELESVLSQYG+ KEIKFFDERASGKSKGYCQVEF+DA AAA CK+GMNGH+FNGR
Sbjct: 240 WTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFNGR 299
Query: 1210 ACVVAFASPQTLKQMGAAYASKNXXXXXXXXQGRRNTND 1094
CVVAFASPQTLKQMGA+Y +KN QG R ND
Sbjct: 300 PCVVAFASPQTLKQMGASYMNKNQGQPQSQNQGSRPMND 338
Score = 233 bits (593), Expect = 4e-58
Identities = 117/221 (52%), Positives = 138/221 (62%), Gaps = 3/221 (1%)
Frame = -1
Query: 829 FDPSFMGRGAGYGGFSGPAFPGMMSPFPAVNPMGLAGVAPHVNPAFFXXXXXXXXXXXXX 650
FDP++MGRG GYGGFSGP FPGM+ FPAVN MGLAGVAPHVNPAFF
Sbjct: 435 FDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNRGMAANGMGMMG 494
Query: 649 XXXXXGHPSGMWGDAGMGGWPVEEHGQKTRESSYGGDDGASEYGYGEGNPEKSSRTNAAP 470
G GMW D+ MGGW EEHG++TRESSYGGDDGAS+YGYGE N EK +R+ AA
Sbjct: 495 SSGMDGPHPGMWTDSSMGGWLGEEHGRRTRESSYGGDDGASDYGYGEANHEKGARSTAAS 554
Query: 469 REKERASEREWSGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDH---RLKERDSGYED 299
REK+R SER+WSGN+ + R ++RDS Y+D
Sbjct: 555 REKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDRRQRDRDSTYDD 614
Query: 298 DWDRGQXXXXXXXXXRAMQEDDHRSRSRDVEYGKRRRAPSE 176
+WDRGQ A+ ++DHRSRSRDV+YGKRRR PSE
Sbjct: 615 NWDRGQSSSRSRSRSGAIPDEDHRSRSRDVDYGKRRRLPSE 655
>ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309507 [Fragaria vesca
subsp. vesca]
Length = 646
Score = 295 bits (756), Expect = 4e-77
Identities = 165/330 (50%), Positives = 202/330 (61%), Gaps = 13/330 (3%)
Frame = -1
Query: 2044 MDPAAEEQIDYGDEEYGGARKVQYQSSGAIPALADEEMIGXXXXXXXXXDGVNVGEGFLQ 1865
MDP EEQIDY +EEYGGA+K+QYQ SGAIPALADEE + + VNVGEGFLQ
Sbjct: 1 MDPMGEEQIDYEEEEYGGAQKLQYQESGAIPALADEEPMVEDDEYDDLYNDVNVGEGFLQ 60
Query: 1864 FHRNEAQVPPSNVGNGVVQARTFNAPQPR-QXXXXXXXXXXXXXXXXXRQHDASLSELGS 1688
HR E +PP+ VGNG +QA+ N P+ R Q +
Sbjct: 61 MHRPEPPLPPAGVGNGGLQAQKNNVPEQRVQGGASQEVKNPGFSVEGKYSSVPEQKDQPP 120
Query: 1687 ANHISGALGQDKRI----HDVSLGNVSFQGPAHVAQNTATNAQDV-GKATNPVI------ 1541
+ + Q R+ HD + N+ FQG A + N ++ D+ GK N I
Sbjct: 121 VSVVPEMASQKGRVMEMTHDAQVRNMGFQGAATMQSNVVADSSDLTGKIANGPIPSMNSG 180
Query: 1540 -GGPSASQGIVNNQMTANANMGADHMMVNDNIIRPQMDNGPTMLFVGELHWWTTDAELES 1364
GP A Q + NQM N + + MVN+N IRP ++NG LFVGELHWWTTDAELE
Sbjct: 181 SNGPPAVQQMPANQM--NMKINVNRPMVNENQIRPPVENGSATLFVGELHWWTTDAELEG 238
Query: 1363 VLSQYGKVKEIKFFDERASGKSKGYCQVEFYDAGAAATCKEGMNGHIFNGRACVVAFASP 1184
VLSQ+G++KEIKFFDERASGKSKGYCQV+FYD AA+ CKEGM+G++FNGRACVVAFAS
Sbjct: 239 VLSQFGRIKEIKFFDERASGKSKGYCQVDFYDPAAASACKEGMDGYVFNGRACVVAFASS 298
Query: 1183 QTLKQMGAAYASKNXXXXXXXXQGRRNTND 1094
QTLKQMG +Y +K+ QGRR ND
Sbjct: 299 QTLKQMGDSYVNKSQGQVQTQPQGRRPMND 328
Score = 221 bits (562), Expect = 1e-54
Identities = 118/222 (53%), Positives = 131/222 (59%), Gaps = 4/222 (1%)
Frame = -1
Query: 829 FDPSFMGRGAGYGGFSGPAFPGMMSPFPAVNPMGLAGVAPHVNPAFFXXXXXXXXXXXXX 650
FDP++MGRG GYGGF GP FPGM+ FP VN MGLAGVAPHVNPAFF
Sbjct: 425 FDPTYMGRGGGYGGFPGPGFPGMLPQFPGVNAMGLAGVAPHVNPAFFGRGMATNGMGMMG 484
Query: 649 XXXXXGHPSGMWGDAGMGGWPVEEHGQKTRESSYGGDDGASEYG-YGEGNPEKSSRTNAA 473
GH + MW D M GW EE ++TRESSYGGDDG SEYG YGE N EK R++AA
Sbjct: 485 SSGMEGHHAPMWNDPSMAGWTGEEQDRRTRESSYGGDDGGSEYGNYGEANHEKPVRSSAA 544
Query: 472 PREKERASEREWSGNS---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHRLKERDSGYE 302
PRE+ER SEREW+G S DHR +ERD YE
Sbjct: 545 PRERERESEREWTGTSERRHRDEREQDWDRSEREHREPRYKEEKDSYRDHRRRERDVAYE 604
Query: 301 DDWDRGQXXXXXXXXXRAMQEDDHRSRSRDVEYGKRRRAPSE 176
DD DRG +AM EDDHRSRSRDV+YGKRRR PSE
Sbjct: 605 DDRDRGHSSSRPRSRSKAMPEDDHRSRSRDVDYGKRRRLPSE 646
>gb|EXB82464.1| Cleavage and polyadenylation specificity factor subunit [Morus
notabilis]
Length = 636
Score = 290 bits (741), Expect = 2e-75
Identities = 177/340 (52%), Positives = 209/340 (61%), Gaps = 27/340 (7%)
Frame = -1
Query: 2032 AEEQIDYGDEEYGGARKVQYQSSG-AIPALADEEMIGXXXXXXXXXDGVNVGEGFLQFHR 1856
AE+ ID+ DEEYGGA+K QYQ SG AI ALADEE++G + VNVGEGFLQ R
Sbjct: 2 AEDHIDFEDEEYGGAQKHQYQGSGGAISALADEELMGDDDEYDDLYNDVNVGEGFLQLQR 61
Query: 1855 NEAQVPPS--NVGNGVVQARTFNAPQPRQXXXXXXXXXXXXXXXXXRQHDASL------- 1703
+EA P+ VGNG+ QA+ N P+PR+ R A
Sbjct: 62 SEAPSLPAAAGVGNGL-QAQKRNFPEPREEIGGSQQPNIPGVSAEGRFSSAGSQFPGQQD 120
Query: 1702 -------SELGSANHISGALGQDKRIHDVSLGNV--SFQGPAHVAQNTATNAQDV-GKAT 1553
SE GS + GA G K G + FQG + + ++ D+ GK
Sbjct: 121 GLKVDKKSEAGSMVYPDGASGSQK-------GRIVAGFQGSKPMLHSVGVDSSDIPGKMV 173
Query: 1552 NPVIGGPSAS----QGIV---NNQMTANANMGADHMMVNDNIIRPQMDNGPTMLFVGELH 1394
N I P++ +GI+ NQ T NAN+ H +VN+N IRP ++NG TMLFVGELH
Sbjct: 174 NEPIQAPNSGGAGPRGILPMQGNQTTVNANVS--HPIVNENQIRPSIENGSTMLFVGELH 231
Query: 1393 WWTTDAELESVLSQYGKVKEIKFFDERASGKSKGYCQVEFYDAGAAATCKEGMNGHIFNG 1214
WWTTDAELESVLSQYG+VKEIKFFDERASGKSKGYCQVE+YDA AA CKEGM+GH+FNG
Sbjct: 232 WWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEYYDAAAAVACKEGMHGHVFNG 291
Query: 1213 RACVVAFASPQTLKQMGAAYASKNXXXXXXXXQGRRNTND 1094
RACVVAFASPQTLKQMGAAY SKN QGRR ND
Sbjct: 292 RACVVAFASPQTLKQMGAAYMSKNQVQNQSQPQGRRPIND 331
Score = 220 bits (560), Expect = 2e-54
Identities = 117/221 (52%), Positives = 130/221 (58%), Gaps = 3/221 (1%)
Frame = -1
Query: 829 FDPSFMGRGAGYGGFSGPAFPGMMSPFPAVNPMGLAGVAPHVNPAFFXXXXXXXXXXXXX 650
FDP++MGRG GYGGF+GPAFPGM+ FPAVN MG A VAPHVNPAFF
Sbjct: 424 FDPTYMGRGVGYGGFAGPAFPGMLPSFPAVNTMGFAAVAPHVNPAFFGRGMTNNGMGMVG 483
Query: 649 XXXXXGHPSGMWGDAGMGGWPVEEHGQKTRESSYGGDDGASEYGYGEGNPEKSSRTNAAP 470
GH GMW D +GGW EEHG++TRESSYGGDDGASEYGYG+ N EK R
Sbjct: 484 SSLMDGHQGGMWNDPSIGGWGGEEHGRRTRESSYGGDDGASEYGYGDTNHEKGGR----- 538
Query: 469 REKERASEREWSGNS---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHRLKERDSGYED 299
ER SER+WSGNS D+R KER+ YED
Sbjct: 539 ---ERGSERDWSGNSERRNHEERDQDWDRSQKEQKEHRYREGKDGSRDYRPKERELDYED 595
Query: 298 DWDRGQXXXXXXXXXRAMQEDDHRSRSRDVEYGKRRRAPSE 176
DWDRGQ R +QED HRSRSRDV+YGKRRR PSE
Sbjct: 596 DWDRGQSSSRLRSRSRVVQEDHHRSRSRDVDYGKRRRLPSE 636
>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
gi|223546091|gb|EEF47594.1| RNA binding protein, putative
[Ricinus communis]
Length = 644
Score = 288 bits (737), Expect = 7e-75
Identities = 167/328 (50%), Positives = 199/328 (60%), Gaps = 15/328 (4%)
Frame = -1
Query: 2032 AEEQIDYGDEEYGGARKVQYQSSGAIPALADEEMIGXXXXXXXXXDGVNVGEGFLQFHRN 1853
A+EQIDY DEEYGGA+K+QYQ SGAIPALA+EEM G + VN+GE FLQ HR+
Sbjct: 2 ADEQIDYEDEEYGGAQKLQYQGSGAIPALAEEEM-GEDDEYDDLYNDVNIGENFLQMHRS 60
Query: 1852 EAQVPPSNVGNGVVQARTFNAPQPRQXXXXXXXXXXXXXXXXXR------QHDASLSELG 1691
EA P +VGNG Q R N + + + E+G
Sbjct: 61 EAPPAPPSVGNGGFQPRNSNDLRVESGGSQGLNIPGVAVESKYSTGTHFPEQNVKGPEIG 120
Query: 1690 SANHISGA-LGQDKRI----HDVSLGNVSFQGPAHVAQNTATNAQDVG-KATNPVIGGPS 1529
S + G+ + Q R+ +D N+ FQG N + D+ K +N P+
Sbjct: 121 SVGYPDGSSIAQKTRVMEMTNDSQARNMGFQGSTSGPSNIGVDPSDMNNKISNDPTPVPN 180
Query: 1528 ASQGIVNNQMTA---NANMGADHMMVNDNIIRPQMDNGPTMLFVGELHWWTTDAELESVL 1358
A V Q+ A N NM + N+N IRP ++NG TML+VGELHWWTTDAELE+VL
Sbjct: 181 AGVPRVIPQLPASQMNMNMDTNRSATNENQIRPPLENGSTMLYVGELHWWTTDAELENVL 240
Query: 1357 SQYGKVKEIKFFDERASGKSKGYCQVEFYDAGAAATCKEGMNGHIFNGRACVVAFASPQT 1178
SQYG VKEIKFFDERASGKSKGYCQVEFYDA AAA CKEGMNGH+FNGRACVVAFAS QT
Sbjct: 241 SQYGMVKEIKFFDERASGKSKGYCQVEFYDAAAAAACKEGMNGHLFNGRACVVAFASQQT 300
Query: 1177 LKQMGAAYASKNXXXXXXXXQGRRNTND 1094
LKQMGA+Y +KN QGRR ND
Sbjct: 301 LKQMGASYMNKNQGQPQSQNQGRRPMND 328
Score = 238 bits (608), Expect = 6e-60
Identities = 126/221 (57%), Positives = 142/221 (64%), Gaps = 3/221 (1%)
Frame = -1
Query: 829 FDPSFMGRGAGYGGFSGPAFPGMMSPFPAVNPMGLAGVAPHVNPAFFXXXXXXXXXXXXX 650
FDP++MGRGAGYGGF+GP FPGM+ FPAVN MGLAGVAPHVNPAFF
Sbjct: 425 FDPTYMGRGAGYGGFAGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFGRGMAPNGMGMMG 484
Query: 649 XXXXXGHPSGMWGDAGMGGWPVEEHGQKTRESSYGGDDGASEYGYGEGNPEKSSRTNAAP 470
G +GMW D MGGW EE G++TRESSYGGDDGASEYGYGE N EK +R++AA
Sbjct: 485 PSGMDGPNAGMWSDTSMGGWG-EEPGRRTRESSYGGDDGASEYGYGEVNHEKGARSSAAS 543
Query: 469 REKERASEREWSGNS---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHRLKERDSGYED 299
REKERASER+WSGNS DHR +ERDSGYED
Sbjct: 544 REKERASERDWSGNSDRRHRDDREHDWDRSEREHKEHRYREEKESYRDHRQRERDSGYED 603
Query: 298 DWDRGQXXXXXXXXXRAMQEDDHRSRSRDVEYGKRRRAPSE 176
DWDRGQ RA+ E+D+RSRSRD +YGKRRR PSE
Sbjct: 604 DWDRGQSSSRSRSRSRAVPEEDYRSRSRDADYGKRRRLPSE 644
>gb|EMJ26876.1| hypothetical protein PRUPE_ppa002814mg [Prunus persica]
Length = 630
Score = 278 bits (712), Expect = 6e-72
Identities = 159/328 (48%), Positives = 197/328 (60%), Gaps = 15/328 (4%)
Frame = -1
Query: 2032 AEEQIDYGDEEYGGARKVQYQSSGAIPALADEEMIGXXXXXXXXXDGVNVGEGFLQFHRN 1853
AEEQIDY DEEYGGA+K+QYQ SGAI ALADEE + + VNV EGFLQ HR+
Sbjct: 2 AEEQIDYEDEEYGGAQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVREGFLQMHRS 61
Query: 1852 EAQVPPSNVGNGVVQARTFNAPQPRQXXXXXXXXXXXXXXXXXRQHDASLSELGSANHIS 1673
EA +PP VGNG +QA+ + + R ++ + + S
Sbjct: 62 EAPLPPGGVGNGGLQAQKTDVTETR--------------VQAGVSQESKIPGVSVQGKYS 107
Query: 1672 GAL-------GQDKRIHDVSLGNVSFQGPAHVAQNTATNAQDVGKAT--------NPVIG 1538
A+ GQ + LG+ + G + N ++ D+ T N
Sbjct: 108 SAVAQFPEQQGQPPVAKEPELGSTGY-GSTTMPPNVGGDSSDITGKTALESVPSMNSGTA 166
Query: 1537 GPSASQGIVNNQMTANANMGADHMMVNDNIIRPQMDNGPTMLFVGELHWWTTDAELESVL 1358
GP+ + NQ++ N A+ M N+N IRP ++NG TMLFVGELHWWTTDAELESVL
Sbjct: 167 GPTGVTQMPTNQISIKVN--ANRPMFNENQIRPPVENGSTMLFVGELHWWTTDAELESVL 224
Query: 1357 SQYGKVKEIKFFDERASGKSKGYCQVEFYDAGAAATCKEGMNGHIFNGRACVVAFASPQT 1178
SQYG+VKEIKFFDERASGKSKGYCQVEF+D AA CKEGM+G++FNGRACVVAFASPQT
Sbjct: 225 SQYGRVKEIKFFDERASGKSKGYCQVEFHDPAAATACKEGMDGYLFNGRACVVAFASPQT 284
Query: 1177 LKQMGAAYASKNXXXXXXXXQGRRNTND 1094
LKQMGA+Y SK+ GRR N+
Sbjct: 285 LKQMGASYLSKSQGQTQSQQPGRRPMNE 312
Score = 251 bits (642), Expect = 7e-64
Identities = 128/222 (57%), Positives = 141/222 (63%), Gaps = 4/222 (1%)
Frame = -1
Query: 829 FDPSFMGRGAGYGGFSGPAFPGMMSPFPAVNPMGLAGVAPHVNPAFFXXXXXXXXXXXXX 650
FDP++MGRG GYGGF GPAFPGM+S FPAVN MGLAGVAPHVNPAFF
Sbjct: 409 FDPTYMGRGGGYGGFPGPAFPGMLSSFPAVNTMGLAGVAPHVNPAFFGRGMATNGMGMMG 468
Query: 649 XXXXXGHPSGMWGDAGMGGWPVEEHGQKTRESSYGGDDGASEYGYGEGNPEKSSRTNAAP 470
GH +GMW D MGGW +EHG++TRESSYGGDDGASEYGYGE N EK R+NA
Sbjct: 469 SSGMDGHHAGMWNDPSMGGWGGDEHGRRTRESSYGGDDGASEYGYGEANHEKGGRSNAPS 528
Query: 469 REKERASEREWSGNS----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHRLKERDSGYE 302
RE+ER SER+WSGNS DHR +ERD GYE
Sbjct: 529 RERERGSERDWSGNSERRHRDEREQDWDRSERGEHREHRYKEEKDSYRDHRQRERDVGYE 588
Query: 301 DDWDRGQXXXXXXXXXRAMQEDDHRSRSRDVEYGKRRRAPSE 176
DDWDRGQ +AM EDDHRSRSRDV+YGKRRR PSE
Sbjct: 589 DDWDRGQSSSRPRSRSKAMPEDDHRSRSRDVDYGKRRRLPSE 630
>ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Solanum tuberosum]
gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185-like
isoform X2 [Solanum tuberosum]
Length = 648
Score = 276 bits (707), Expect = 2e-71
Identities = 153/341 (44%), Positives = 199/341 (58%), Gaps = 24/341 (7%)
Frame = -1
Query: 2044 MDPAAEEQIDYGDEEYGGARKVQYQSSGAIPALADEEMIGXXXXXXXXXDGVNVGEGFLQ 1865
MDP A+EQ+DYGDEEYGG+ K+QY SG IPALA++EM+G + VN+GEGFLQ
Sbjct: 1 MDPTADEQLDYGDEEYGGSHKMQYHGSGTIPALAEDEMMGEDDEYDDLYNDVNIGEGFLQ 60
Query: 1864 FHRNEAQVPPSNVGNGVVQARTFNAPQPRQXXXXXXXXXXXXXXXXXR----------QH 1715
R+E VP + GNG QA+ + P R + Q
Sbjct: 61 LQRSEVPVPSVDAGNGNFQAQKDSFPASRAGGLGSEEAKIPGIATEGKYAGTEVQFPQQK 120
Query: 1714 DASLSELGSANHISGALGQDKRIHDVSL------GNVSFQGPAHVAQNTAT--------N 1577
+ E + A Q R +++ GN +QG + Q N
Sbjct: 121 GEPVVERETERPADAA--QKARPSAITMTLNSQAGNSGYQGSMPMPQKIGADPMAMPEKN 178
Query: 1576 AQDVGKATNPVIGGPSASQGIVNNQMTANANMGADHMMVNDNIIRPQMDNGPTMLFVGEL 1397
A + N V+ GP + NQ+ ++ N+ ++ ++++ RP ++NG TMLFVGEL
Sbjct: 179 ASEATPLMNSVVPGPRVVPHMPTNQLNSSGNVNMNNPVISETPFRPSLENGNTMLFVGEL 238
Query: 1396 HWWTTDAELESVLSQYGKVKEIKFFDERASGKSKGYCQVEFYDAGAAATCKEGMNGHIFN 1217
HWWTTDAELESVL+QYG VKEIKFFDERASGKSKGYCQVEF+D +AA CKEGMNG+ FN
Sbjct: 239 HWWTTDAELESVLTQYGNVKEIKFFDERASGKSKGYCQVEFFDPASAAACKEGMNGYNFN 298
Query: 1216 GRACVVAFASPQTLKQMGAAYASKNXXXXXXXXQGRRNTND 1094
GRACVVAFA+PQT+KQMG++YA+K QGRR N+
Sbjct: 299 GRACVVAFATPQTIKQMGSSYANKTQNQVQSQPQGRRPMNE 339
Score = 238 bits (607), Expect = 8e-60
Identities = 124/218 (56%), Positives = 138/218 (63%)
Frame = -1
Query: 829 FDPSFMGRGAGYGGFSGPAFPGMMSPFPAVNPMGLAGVAPHVNPAFFXXXXXXXXXXXXX 650
FDPSFMGRGAGYGGFSGPAFPGMM PF AVNPMGL GVAPHVNPAFF
Sbjct: 431 FDPSFMGRGAGYGGFSGPAFPGMMPPFQAVNPMGLPGVAPHVNPAFFGRGMAANGMGMMS 490
Query: 649 XXXXXGHPSGMWGDAGMGGWPVEEHGQKTRESSYGGDDGASEYGYGEGNPEKSSRTNAAP 470
G GMW D GGW EEHG++TRESSYGG+D ASEYGYGE + +K +R++A
Sbjct: 491 AAGMDGPHPGMWTDTSGGGWGGEEHGRRTRESSYGGEDNASEYGYGEVSHDKGARSSAVS 550
Query: 469 REKERASEREWSGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHRLKERDSGYEDDWD 290
REKER SER+WSGNS D+R KER+S YE+D+D
Sbjct: 551 REKERGSERDWSGNSDKRHRDEREHDRDRHDKEHRYREERDGYRDYRQKERESEYEEDYD 610
Query: 289 RGQXXXXXXXXXRAMQEDDHRSRSRDVEYGKRRRAPSE 176
RGQ RA QE+DHRSRSRD YGKRRRAPSE
Sbjct: 611 RGQSSSRSRSKSRAAQEEDHRSRSRDTNYGKRRRAPSE 648
>gb|EPS60955.1| hypothetical protein M569_13847, partial [Genlisea aurea]
Length = 508
Score = 253 bits (646), Expect = 3e-64
Identities = 145/322 (45%), Positives = 180/322 (55%), Gaps = 10/322 (3%)
Frame = -1
Query: 2044 MDPAAEEQIDYGDEEYGGARKVQYQSSGAIPALADEEMIGXXXXXXXXXDG-VNVGEGFL 1868
M+P EQ D+G+EEYGG +K+QY GAIPALADEEMIG VNVGE F+
Sbjct: 1 MEPMNGEQFDFGEEEYGGGQKMQYNQGGAIPALADEEMIGEEDDEYDDLYNDVNVGESFM 60
Query: 1867 QFHRNEAQVPPSNVGNGVVQARTFNAPQPRQXXXXXXXXXXXXXXXXXRQHDASLSELGS 1688
Q R ++Q+PP N V + T + P + Q + L +
Sbjct: 61 QVQRPDSQIPPFKAENRVNPSGTGDESIPSEEANASKYAGNRAFGPGALQFPEQKAGLNT 120
Query: 1687 ANHISGALGQDKRIHDVSLGNVSFQGPAHVAQNTATNAQDVGKATNPVIGGPSASQGIVN 1508
S + + + + + +QG VA N T +D K + +G PS+ V
Sbjct: 121 TEETSVTVDRSQTVRNSQTDQSGYQGS--VAPNNKT--EDQVKNMDKTVGDPSSINPNVG 176
Query: 1507 NQMTANANMGADHMMVNDNIIRPQMD---------NGPTMLFVGELHWWTTDAELESVLS 1355
+M N N IRP D NG TML+VGELHWWTTDAE+ESVL
Sbjct: 177 VGSKGAVPFNFMNMAANANAIRPVDDEYSNLGSSENGNTMLYVGELHWWTTDAEIESVLI 236
Query: 1354 QYGKVKEIKFFDERASGKSKGYCQVEFYDAGAAATCKEGMNGHIFNGRACVVAFASPQTL 1175
QYGKVKEIKFFDERASGKSKGYCQVEF+D AA CKEGMNG++FNGRACVVAFA+PQT+
Sbjct: 237 QYGKVKEIKFFDERASGKSKGYCQVEFFDPAAAHACKEGMNGYVFNGRACVVAFATPQTI 296
Query: 1174 KQMGAAYASKNXXXXXXXXQGR 1109
KQMGA+Y ++N GR
Sbjct: 297 KQMGASYMNRNQGQPQAQFPGR 318
Score = 104 bits (260), Expect = 1e-19
Identities = 57/98 (58%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Frame = -1
Query: 829 FDPSFMGRGAGYGG-FSGPAFPGMMSPFPAVNPMGLAGVAPHVNPAFFXXXXXXXXXXXX 653
FD +FMGRGAGYGG F+GPAFPGM+ PFPAVN +GL GVAPHVNPAFF
Sbjct: 412 FDLAFMGRGAGYGGGFTGPAFPGMLPPFPAVNTLGLPGVAPHVNPAFFGRGMAPNGMGMM 471
Query: 652 XXXXXXGHPSGMWGDAGM-GGWPVEEHGQKTRESSYGG 542
G SG+W DA + GGW EE G + ESSYGG
Sbjct: 472 GPSGMGGPYSGLWNDASVGGGWGGEEQG-RGPESSYGG 508
>ref|XP_002312652.1| RNA recognition motif-containing family protein [Populus trichocarpa]
gi|222852472|gb|EEE90019.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 619
Score = 248 bits (633), Expect = 8e-63
Identities = 149/333 (44%), Positives = 189/333 (56%), Gaps = 24/333 (7%)
Frame = -1
Query: 2020 IDYGDEEYGGARKVQYQSSGAIPALADEEMIGXXXXXXXXXDGVNVGEGFLQFHRNEAQV 1841
+DY +EE K+QYQ SGAIPALA+EEM G + VNVGE FLQ H +EA
Sbjct: 1 MDYEEEE-----KMQYQGSGAIPALAEEEM-GEDDEYDDLYNDVNVGENFLQMHGSEAPA 54
Query: 1840 PPSNVGNGVVQARTFNAPQPRQXXXXXXXXXXXXXXXXXRQHDASLS-----------EL 1694
PP+ VGNG Q R + + +A E
Sbjct: 55 PPATVGNGGFQTRNAHESRIETGGSQALAITGGGPAVEGIYSNAKAHFPEQKQVAVAVEA 114
Query: 1693 GSANHISGA-LGQDKRI----HDVSLGNVSFQGPAHVAQNTATNAQDVGKATN------P 1547
+ G+ + Q R+ HDV + N+ FQ V + D+ + P
Sbjct: 115 QDVGPVDGSSVAQKGRVIEMSHDVQVRNMGFQKSTPVPPGIGVDPSDMSRKNAIEPEPLP 174
Query: 1546 VIG--GPSASQGIVNNQMTANANMGADHMMVNDNIIRPQMDNGPTMLFVGELHWWTTDAE 1373
+ G GP + + NQM +A++ + +VN+N +RP ++NG T L+VGELHWWTTDAE
Sbjct: 175 ITGSAGPRGAPQMQVNQMHMSADV--NRPVVNENQVRPPIENGSTTLYVGELHWWTTDAE 232
Query: 1372 LESVLSQYGKVKEIKFFDERASGKSKGYCQVEFYDAGAAATCKEGMNGHIFNGRACVVAF 1193
LES SQ+G+VKEIKFFDERASGKSKGYCQV+FY+A AAA CKEGMNGH+FNGR CVVAF
Sbjct: 233 LESFASQFGRVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNGHVFNGRPCVVAF 292
Query: 1192 ASPQTLKQMGAAYASKNXXXXXXXXQGRRNTND 1094
ASPQTLKQMGA+Y +K QGR + ND
Sbjct: 293 ASPQTLKQMGASYMNKTQGQPQTQSQGRGSMND 325
Score = 199 bits (507), Expect = 3e-48
Identities = 109/218 (50%), Positives = 122/218 (55%)
Frame = -1
Query: 829 FDPSFMGRGAGYGGFSGPAFPGMMSPFPAVNPMGLAGVAPHVNPAFFXXXXXXXXXXXXX 650
FDP +MGRG GYGGF+GP FPGM+ FPAVN MGLAGVAPHVNPAFF
Sbjct: 420 FDPLYMGRGGGYGGFAGPGFPGMLPSFPAVNSMGLAGVAPHVNPAFFARGMAPNGMGMMV 479
Query: 649 XXXXXGHPSGMWGDAGMGGWPVEEHGQKTRESSYGGDDGASEYGYGEGNPEKSSRTNAAP 470
G GMW ESSY GD+GASEYGYGEGN EK +R++ A
Sbjct: 480 SSGMDGPNPGMW------------------ESSYDGDEGASEYGYGEGNHEKGARSSGAS 521
Query: 469 REKERASEREWSGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHRLKERDSGYEDDWD 290
REKER SER+WSGNS HR +ERDSGYEDD D
Sbjct: 522 REKERGSERDWSGNSDRRHRDEREQDWDRPEREHRYKEEKDSYRGHRQRERDSGYEDDRD 581
Query: 289 RGQXXXXXXXXXRAMQEDDHRSRSRDVEYGKRRRAPSE 176
RG RA E+D+RSR+RDV+YGKRRR PSE
Sbjct: 582 RGHSSSRARSRSRAAPEEDYRSRTRDVDYGKRRRLPSE 619
>ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Populus trichocarpa]
gi|550329195|gb|ERP56065.1| hypothetical protein
POPTR_0010s06150g [Populus trichocarpa]
Length = 591
Score = 241 bits (616), Expect = 8e-61
Identities = 146/309 (47%), Positives = 180/309 (58%)
Frame = -1
Query: 2020 IDYGDEEYGGARKVQYQSSGAIPALADEEMIGXXXXXXXXXDGVNVGEGFLQFHRNEAQV 1841
+D+ +EE K+QYQ SGAIPALA+EE+ G + VNVGE FLQ H +EA
Sbjct: 1 MDFEEEE-----KMQYQGSGAIPALAEEEL-GEDDEYDDLYNDVNVGENFLQMHGSEAPA 54
Query: 1840 PPSNVGNGVVQARTFNAPQPRQXXXXXXXXXXXXXXXXXRQHDASLSELGSANHISGALG 1661
PP+ GNG Q R NA + R + S G+ G
Sbjct: 55 PPATAGNGGFQTR--NAHESRVETGGSQVLATSGAGVAV---EGKYSNAGAHFPEQKQAG 109
Query: 1660 QDKRIHDVSLGNVSFQGPAHVAQNTATNAQDVGKATNPVIGGPSASQGIVNNQMTANANM 1481
+DV G++ + + VAQ + GP + NQM NA++
Sbjct: 110 IGVEANDV--GSIGYGDGSSVAQKGSA--------------GPRGVPQMQVNQMNMNADV 153
Query: 1480 GADHMMVNDNIIRPQMDNGPTMLFVGELHWWTTDAELESVLSQYGKVKEIKFFDERASGK 1301
+ +VN+N +RP ++NGPT L+VGELHWWTTDAELESV SQYG+VKEIKFFDERASGK
Sbjct: 154 --NRPVVNENQVRPPIENGPTTLYVGELHWWTTDAELESVASQYGRVKEIKFFDERASGK 211
Query: 1300 SKGYCQVEFYDAGAAATCKEGMNGHIFNGRACVVAFASPQTLKQMGAAYASKNXXXXXXX 1121
SKGYCQV+FY+A AAA CKEGMN H+FNGR CVVAFAS QTLKQMGA+Y SK
Sbjct: 212 SKGYCQVDFYEAAAAAACKEGMNEHVFNGRPCVVAFASAQTLKQMGASYMSKTQGQPQPQ 271
Query: 1120 XQGRRNTND 1094
QGR + ND
Sbjct: 272 SQGRGSMND 280
Score = 223 bits (567), Expect = 4e-55
Identities = 118/218 (54%), Positives = 131/218 (60%)
Frame = -1
Query: 829 FDPSFMGRGAGYGGFSGPAFPGMMSPFPAVNPMGLAGVAPHVNPAFFXXXXXXXXXXXXX 650
FDP +MGRG GYGGF G FPGM+ FPAVN MGLAGVAPHVNPAFF
Sbjct: 375 FDPLYMGRGGGYGGFPGHGFPGMLPSFPAVNSMGLAGVAPHVNPAFFARGMAPNGMGMMA 434
Query: 649 XXXXXGHPSGMWGDAGMGGWPVEEHGQKTRESSYGGDDGASEYGYGEGNPEKSSRTNAAP 470
G G W D MGGW EE G++TRESSY GD+GASEYGYGEGN EK +R++ A
Sbjct: 435 SSGMEGPNPGKWPDTSMGGWG-EEPGRRTRESSYDGDEGASEYGYGEGNHEKGARSSGAS 493
Query: 469 REKERASEREWSGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHRLKERDSGYEDDWD 290
REKER SER+WSGNS HR +ERDSGYEDD D
Sbjct: 494 REKERVSERDWSGNSDRRHRDEREQDWDRSEREPKYREEKDTYRGHRQRERDSGYEDDRD 553
Query: 289 RGQXXXXXXXXXRAMQEDDHRSRSRDVEYGKRRRAPSE 176
RG RA E+D+RSRSRDV+YGKRRR PSE
Sbjct: 554 RGHSSSRARSRSRAAPEEDYRSRSRDVDYGKRRRPPSE 591
>ref|XP_002315647.1| RNA recognition motif-containing family protein [Populus trichocarpa]
gi|222864687|gb|EEF01818.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 573
Score = 241 bits (616), Expect = 8e-61
Identities = 146/309 (47%), Positives = 180/309 (58%)
Frame = -1
Query: 2020 IDYGDEEYGGARKVQYQSSGAIPALADEEMIGXXXXXXXXXDGVNVGEGFLQFHRNEAQV 1841
+D+ +EE K+QYQ SGAIPALA+EE+ G + VNVGE FLQ H +EA
Sbjct: 1 MDFEEEE-----KMQYQGSGAIPALAEEEL-GEDDEYDDLYNDVNVGENFLQMHGSEAPA 54
Query: 1840 PPSNVGNGVVQARTFNAPQPRQXXXXXXXXXXXXXXXXXRQHDASLSELGSANHISGALG 1661
PP+ GNG Q R NA + R + S G+ G
Sbjct: 55 PPATAGNGGFQTR--NAHESRVETGGSQVLATSGAGVAV---EGKYSNAGAHFPEQKQAG 109
Query: 1660 QDKRIHDVSLGNVSFQGPAHVAQNTATNAQDVGKATNPVIGGPSASQGIVNNQMTANANM 1481
+DV G++ + + VAQ + GP + NQM NA++
Sbjct: 110 IGVEANDV--GSIGYGDGSSVAQKGSA--------------GPRGVPQMQVNQMNMNADV 153
Query: 1480 GADHMMVNDNIIRPQMDNGPTMLFVGELHWWTTDAELESVLSQYGKVKEIKFFDERASGK 1301
+ +VN+N +RP ++NGPT L+VGELHWWTTDAELESV SQYG+VKEIKFFDERASGK
Sbjct: 154 --NRPVVNENQVRPPIENGPTTLYVGELHWWTTDAELESVASQYGRVKEIKFFDERASGK 211
Query: 1300 SKGYCQVEFYDAGAAATCKEGMNGHIFNGRACVVAFASPQTLKQMGAAYASKNXXXXXXX 1121
SKGYCQV+FY+A AAA CKEGMN H+FNGR CVVAFAS QTLKQMGA+Y SK
Sbjct: 212 SKGYCQVDFYEAAAAAACKEGMNEHVFNGRPCVVAFASAQTLKQMGASYMSKTQGQPQPQ 271
Query: 1120 XQGRRNTND 1094
QGR + ND
Sbjct: 272 SQGRGSMND 280
Score = 198 bits (504), Expect = 7e-48
Identities = 110/218 (50%), Positives = 124/218 (56%)
Frame = -1
Query: 829 FDPSFMGRGAGYGGFSGPAFPGMMSPFPAVNPMGLAGVAPHVNPAFFXXXXXXXXXXXXX 650
FDP +MGRG GYGGF G FPGM+ FPAVN MGLAGVAPHVNPAFF
Sbjct: 375 FDPLYMGRGGGYGGFPGHGFPGMLPSFPAVNSMGLAGVAPHVNPAFF------------- 421
Query: 649 XXXXXGHPSGMWGDAGMGGWPVEEHGQKTRESSYGGDDGASEYGYGEGNPEKSSRTNAAP 470
+ GM +GM G +ESSY GD+GASEYGYGEGN EK +R++ A
Sbjct: 422 ARGMAPNGMGMMASSGMEG------PNPGKESSYDGDEGASEYGYGEGNHEKGARSSGAS 475
Query: 469 REKERASEREWSGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHRLKERDSGYEDDWD 290
REKER SER+WSGNS HR +ERDSGYEDD D
Sbjct: 476 REKERVSERDWSGNSDRRHRDEREQDWDRSEREPKYREEKDTYRGHRQRERDSGYEDDRD 535
Query: 289 RGQXXXXXXXXXRAMQEDDHRSRSRDVEYGKRRRAPSE 176
RG RA E+D+RSRSRDV+YGKRRR PSE
Sbjct: 536 RGHSSSRARSRSRAAPEEDYRSRSRDVDYGKRRRPPSE 573
>ref|XP_006417146.1| hypothetical protein EUTSA_v10007191mg [Eutrema salsugineum]
gi|557094917|gb|ESQ35499.1| hypothetical protein
EUTSA_v10007191mg [Eutrema salsugineum]
Length = 578
Score = 237 bits (605), Expect = 1e-59
Identities = 143/309 (46%), Positives = 176/309 (56%), Gaps = 8/309 (2%)
Frame = -1
Query: 2044 MDPAAEEQIDYGDEEYGGARKVQYQSSGAIPALADEEMIGXXXXXXXXXDGVNVGEGFLQ 1865
M+P +EE + YG G +K+ +Q SG IPALADEE++G VNVGE F Q
Sbjct: 1 MNPMSEENVSYG-----GNQKLLHQGSGTIPALADEELMGEDDDYDDLYSDVNVGESFFQ 55
Query: 1864 FHRNEAQVPPS--NVGNGVVQARTFNAPQPRQXXXXXXXXXXXXXXXXXRQHDASLSELG 1691
H ++ Q P G+G +QA+ N +PR +
Sbjct: 56 AH-HQPQTPAQVGGTGSGNIQAQNSNVAEPRMANVSGVTVEGKYRNDGGHNGISGPETRS 114
Query: 1690 SANHISGALGQDKRIHDVSLGNVSFQGPAHVAQNT---ATNAQDVGKAT--NPVIGGPSA 1526
+ G DV V QG + NT + NA +V + NP P
Sbjct: 115 DVYPQASPFGAKGSNIDVQSNKVIPQGSTSIVLNTHGFSGNAVNVPEPPVHNPYGAVPQG 174
Query: 1525 SQGIVNNQMTANANMGADHMMVNDNIIRP-QMDNGPTMLFVGELHWWTTDAELESVLSQY 1349
+Q I +QM AN N MVN + +P +DNG TMLFVGELHWWTTDAE+ESVLSQY
Sbjct: 175 AQQIPVSQMNANPNA-----MVNRSPTQPFVVDNGNTMLFVGELHWWTTDAEIESVLSQY 229
Query: 1348 GKVKEIKFFDERASGKSKGYCQVEFYDAGAAATCKEGMNGHIFNGRACVVAFASPQTLKQ 1169
G+VKEIKFFDER SGKSKGYCQVEFYD+ AAA CKEGMNG +FNG+ACVVAFASP+TLKQ
Sbjct: 230 GRVKEIKFFDERVSGKSKGYCQVEFYDSAAAAACKEGMNGFVFNGKACVVAFASPETLKQ 289
Query: 1168 MGAAYASKN 1142
MGA + +N
Sbjct: 290 MGANFTGRN 298
Score = 134 bits (336), Expect = 2e-28
Identities = 87/216 (40%), Positives = 108/216 (50%), Gaps = 2/216 (0%)
Frame = -1
Query: 829 FDPSFMGRGAGYGGFSGPAFPGMMSPFPAVNPMGLAGVAPHVNPAFFXXXXXXXXXXXXX 650
FDP+FMGRG GYGGFSG A+PGM +P VN MG+ G+APHVNPAFF
Sbjct: 399 FDPTFMGRGGGYGGFSGLAYPGMPHSYPGVNAMGMVGIAPHVNPAFF----GTGMGTMGS 454
Query: 649 XXXXXGHPSGMWGDAGMGGWPVEEHGQKTRESSYGGDDGASEY-GYGEGNPEKSSRTNAA 473
H + MW +A GG GG++G SEY GY + N EK + +
Sbjct: 455 SGMNGAHAAAMWNEANGGG---------------GGEEGGSEYGGYEDENQEKEDKPS-- 497
Query: 472 PREKERA-SEREWSGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHRLKERDSGYEDD 296
R+KERA +EREWS +S + ++RDS D+
Sbjct: 498 -RDKERATTEREWSESS------------GDRRHKSHREEKDSHREYKQQRDRDS---DE 541
Query: 295 WDRGQXXXXXXXXXRAMQEDDHRSRSRDVEYGKRRR 188
+DRGQ M EDDHRSRSRD +YGKRRR
Sbjct: 542 YDRGQ-SSMKSRSRSRMAEDDHRSRSRDADYGKRRR 576