BLASTX nr result
ID: Achyranthes23_contig00009409
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00009409
(1341 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I an... 469 e-129
gb|EOY11972.1| RNA polymerase I subunit 43 isoform 4 [Theobroma ... 462 e-127
gb|EOY11969.1| RNA polymerase I subunit 43 isoform 1 [Theobroma ... 462 e-127
ref|XP_006344900.1| PREDICTED: DNA-directed RNA polymerases I an... 457 e-126
ref|XP_004251939.1| PREDICTED: DNA-directed RNA polymerases I an... 456 e-125
gb|EOY11970.1| RNA polymerase I subunit 43 isoform 2 [Theobroma ... 452 e-124
ref|XP_006452630.1| hypothetical protein CICLE_v10008413mg [Citr... 448 e-123
ref|XP_006474843.1| PREDICTED: DNA-directed RNA polymerases I an... 447 e-123
ref|XP_004148257.1| PREDICTED: DNA-directed RNA polymerases I an... 434 e-119
gb|EPS59249.1| hypothetical protein M569_15560, partial [Genlise... 428 e-117
ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, ... 428 e-117
gb|EMJ06508.1| hypothetical protein PRUPE_ppa006811mg [Prunus pe... 426 e-117
ref|XP_004488284.1| PREDICTED: DNA-directed RNA polymerases I an... 426 e-116
ref|XP_004498147.1| PREDICTED: DNA-directed RNA polymerases I an... 424 e-116
ref|NP_001242652.1| uncharacterized protein LOC100786622 [Glycin... 424 e-116
ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I an... 422 e-115
ref|XP_002300385.1| DNA-directed RNA polymerase family protein [... 419 e-114
gb|ESW18590.1| hypothetical protein PHAVU_006G053600g [Phaseolus... 415 e-113
ref|NP_176261.1| RNA polymerase I subunit 43 [Arabidopsis thalia... 412 e-112
ref|XP_006392109.1| hypothetical protein EUTSA_v10023529mg [Eutr... 411 e-112
>ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
[Vitis vinifera] gi|296089944|emb|CBI39763.3| unnamed
protein product [Vitis vinifera]
Length = 372
Score = 469 bits (1206), Expect = e-129
Identities = 230/317 (72%), Positives = 268/317 (84%), Gaps = 2/317 (0%)
Frame = +3
Query: 3 LGVDNST-LETFFKDFKVVINRLTEDDIEFELIGIDAALANAFRRILISEVPTMAIEKVL 179
+GVDNS ++ F +F+V + RL+EDD+EF++IGID ++ANAFRRILI+E+PTMAIEKVL
Sbjct: 50 MGVDNSLRMDQFCNNFRVEVIRLSEDDMEFDMIGIDPSIANAFRRILIAELPTMAIEKVL 109
Query: 180 IANNTSVVQDEVLSHRLGLIPLKVDPRLFSYKSEKDEPNEKNTIVFGLHARCERGGPRRT 359
IANNTS+VQDEVL+HRLGLIP+ DPRLF SE D PNEKNTIVF LH RCERGGPR T
Sbjct: 110 IANNTSIVQDEVLAHRLGLIPINADPRLFDDLSENDTPNEKNTIVFNLHVRCERGGPRLT 169
Query: 360 VKSEELKWQPTGSMFALELDNKGSSSTAAPKTYTNYKSSQDKQPEFTNNPIHPKYPDITI 539
VKS ELKW P GS F L +N SSST+ PKTYT++ SQD PEF++ I PK+PDI I
Sbjct: 170 VKSNELKWLPHGSEFPLATENTTSSSTSKPKTYTSFSCSQDSLPEFSDKSIGPKHPDIII 229
Query: 540 ARIGPGQEIELEAHAIKGIGKEHAKWSPVATAWYRMLPEVVLLQDIYDEKAEKLVNKCPT 719
A++GPGQEIELEAHA+KG+GK HAKWSPVATAWYRMLPEVVLLQ+I DEKAE+LV KCP
Sbjct: 230 AKLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQEIEDEKAEELVKKCPV 289
Query: 720 NVFDIEDTPAG-KKASVSRSRACTLCRECIREEGWDEYVALRRKKDHFIFTIESTGALPP 896
NVFDIED G KKA+V+R RACTLCRECIR + WD++VA+RR K+HFIFTIESTGALPP
Sbjct: 290 NVFDIEDIAKGKKKATVARPRACTLCRECIRGDDWDKHVAIRRVKNHFIFTIESTGALPP 349
Query: 897 EVLFTEAVKILEDKCER 947
EVLF EAVK+LEDKCER
Sbjct: 350 EVLFNEAVKVLEDKCER 366
>gb|EOY11972.1| RNA polymerase I subunit 43 isoform 4 [Theobroma cacao]
Length = 323
Score = 462 bits (1190), Expect = e-127
Identities = 228/317 (71%), Positives = 265/317 (83%), Gaps = 2/317 (0%)
Frame = +3
Query: 3 LGVDNST-LETFFKDFKVVINRLTEDDIEFELIGIDAALANAFRRILISEVPTMAIEKVL 179
+GVDNS L+ F +F+V + RLTE+D+EF++IGIDAA+ANAFRRILI+E+PTMAIEKVL
Sbjct: 1 MGVDNSLRLDHFCHNFRVEVVRLTEEDMEFDMIGIDAAIANAFRRILIAELPTMAIEKVL 60
Query: 180 IANNTSVVQDEVLSHRLGLIPLKVDPRLFSYKSEKDEPNEKNTIVFGLHARCERGGPRRT 359
IANNTSVVQDEVL+HRLGLIP+ VDPRLF Y SE D+PNEKNTIVF LH C+RG PR T
Sbjct: 61 IANNTSVVQDEVLAHRLGLIPISVDPRLFEYMSENDQPNEKNTIVFKLHVHCKRGSPRIT 120
Query: 360 VKSEELKWQPTGSMFALELDNKGSSSTAAPKTYTNYKSSQDKQPEFTNNPIHPKYPDITI 539
VKS+ELKW P GS E S S + P+TYT++ SQD PEF NNPI PKYPDI I
Sbjct: 121 VKSDELKWLPNGSELIKESRKVASDSASKPETYTSFSCSQDTLPEFANNPIAPKYPDIII 180
Query: 540 ARIGPGQEIELEAHAIKGIGKEHAKWSPVATAWYRMLPEVVLLQDIYDEKAEKLVNKCPT 719
+++GPGQEIELEAHA+KG+GK HAKWSPVATAWYRMLPEVVLL+++ D+ AE L +KCP
Sbjct: 181 SKLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDDLAEGLKSKCPV 240
Query: 720 NVFDIEDTPAGKK-ASVSRSRACTLCRECIREEGWDEYVALRRKKDHFIFTIESTGALPP 896
NVFDIED GKK A+V+R RACTLCRECIR+E W++ VA+ R KDHFIFTIESTGALPP
Sbjct: 241 NVFDIEDLGKGKKRATVARPRACTLCRECIRDEEWEKRVAIHRVKDHFIFTIESTGALPP 300
Query: 897 EVLFTEAVKILEDKCER 947
EVLFTEAVKILEDKCER
Sbjct: 301 EVLFTEAVKILEDKCER 317
>gb|EOY11969.1| RNA polymerase I subunit 43 isoform 1 [Theobroma cacao]
Length = 383
Score = 462 bits (1190), Expect = e-127
Identities = 228/317 (71%), Positives = 265/317 (83%), Gaps = 2/317 (0%)
Frame = +3
Query: 3 LGVDNST-LETFFKDFKVVINRLTEDDIEFELIGIDAALANAFRRILISEVPTMAIEKVL 179
+GVDNS L+ F +F+V + RLTE+D+EF++IGIDAA+ANAFRRILI+E+PTMAIEKVL
Sbjct: 61 MGVDNSLRLDHFCHNFRVEVVRLTEEDMEFDMIGIDAAIANAFRRILIAELPTMAIEKVL 120
Query: 180 IANNTSVVQDEVLSHRLGLIPLKVDPRLFSYKSEKDEPNEKNTIVFGLHARCERGGPRRT 359
IANNTSVVQDEVL+HRLGLIP+ VDPRLF Y SE D+PNEKNTIVF LH C+RG PR T
Sbjct: 121 IANNTSVVQDEVLAHRLGLIPISVDPRLFEYMSENDQPNEKNTIVFKLHVHCKRGSPRIT 180
Query: 360 VKSEELKWQPTGSMFALELDNKGSSSTAAPKTYTNYKSSQDKQPEFTNNPIHPKYPDITI 539
VKS+ELKW P GS E S S + P+TYT++ SQD PEF NNPI PKYPDI I
Sbjct: 181 VKSDELKWLPNGSELIKESRKVASDSASKPETYTSFSCSQDTLPEFANNPIAPKYPDIII 240
Query: 540 ARIGPGQEIELEAHAIKGIGKEHAKWSPVATAWYRMLPEVVLLQDIYDEKAEKLVNKCPT 719
+++GPGQEIELEAHA+KG+GK HAKWSPVATAWYRMLPEVVLL+++ D+ AE L +KCP
Sbjct: 241 SKLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDDLAEGLKSKCPV 300
Query: 720 NVFDIEDTPAGKK-ASVSRSRACTLCRECIREEGWDEYVALRRKKDHFIFTIESTGALPP 896
NVFDIED GKK A+V+R RACTLCRECIR+E W++ VA+ R KDHFIFTIESTGALPP
Sbjct: 301 NVFDIEDLGKGKKRATVARPRACTLCRECIRDEEWEKRVAIHRVKDHFIFTIESTGALPP 360
Query: 897 EVLFTEAVKILEDKCER 947
EVLFTEAVKILEDKCER
Sbjct: 361 EVLFTEAVKILEDKCER 377
>ref|XP_006344900.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Solanum tuberosum]
Length = 393
Score = 457 bits (1175), Expect = e-126
Identities = 228/317 (71%), Positives = 262/317 (82%), Gaps = 2/317 (0%)
Frame = +3
Query: 3 LGVDNST-LETFFKDFKVVINRLTEDDIEFELIGIDAALANAFRRILISEVPTMAIEKVL 179
+GVDNS E F +FKV I RL ED++EF++IGID +LANAFRRILI+E+PTMAIEKVL
Sbjct: 71 MGVDNSVRFEQFRNNFKVEIVRLEEDELEFDMIGIDPSLANAFRRILIAELPTMAIEKVL 130
Query: 180 IANNTSVVQDEVLSHRLGLIPLKVDPRLFSYKSEKDEPNEKNTIVFGLHARCERGGPRRT 359
IANNTS++QDEVL+HRLGLIP++VDPRLF Y SE D PNEKNTIVF LHARC +G R
Sbjct: 131 IANNTSIIQDEVLAHRLGLIPIEVDPRLFEYMSENDVPNEKNTIVFKLHARCTKGSDRLR 190
Query: 360 VKSEELKWQPTGSMFALELDNKGSSSTAAPKTYTNYKSSQDKQPEFTNNPIHPKYPDITI 539
V S ELKW P GS L ++ SSS+A PKTYT++ SQD PEF+N+PI PK DI +
Sbjct: 191 VLSSELKWLPNGSELILGTEHSASSSSAKPKTYTSFSCSQDTLPEFSNDPIAPKDADIIV 250
Query: 540 ARIGPGQEIELEAHAIKGIGKEHAKWSPVATAWYRMLPEVVLLQDIYDEKAEKLVNKCPT 719
A++GPGQEIELEAHA+KG+GK HAKWSPVATAWYRMLPEVVLL+DI D++AE LV KCP
Sbjct: 251 AKLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLRDIEDDEAEALVKKCPV 310
Query: 720 NVFDIEDTPAGKK-ASVSRSRACTLCRECIREEGWDEYVALRRKKDHFIFTIESTGALPP 896
VFDIED GKK A+V+R R CTLCRECIREEGWD+ VALRR DHFIFTIESTGALPP
Sbjct: 311 KVFDIEDIGKGKKRATVARPRICTLCRECIREEGWDKNVALRRVNDHFIFTIESTGALPP 370
Query: 897 EVLFTEAVKILEDKCER 947
EVLFTEAVKILE+KCER
Sbjct: 371 EVLFTEAVKILEEKCER 387
>ref|XP_004251939.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Solanum lycopersicum]
Length = 393
Score = 456 bits (1172), Expect = e-125
Identities = 227/317 (71%), Positives = 262/317 (82%), Gaps = 2/317 (0%)
Frame = +3
Query: 3 LGVDNST-LETFFKDFKVVINRLTEDDIEFELIGIDAALANAFRRILISEVPTMAIEKVL 179
+GVDNS E F +FKV I RL ED++EF++IGID +LANAFRRILI+E+PTMAIEKVL
Sbjct: 71 MGVDNSVRFEQFRDNFKVEIVRLEEDELEFDMIGIDPSLANAFRRILIAELPTMAIEKVL 130
Query: 180 IANNTSVVQDEVLSHRLGLIPLKVDPRLFSYKSEKDEPNEKNTIVFGLHARCERGGPRRT 359
IANNTS++QDEVL+HRLGLIP+KVDPRLF Y SE D PNEKNTIVF LH RC +G R
Sbjct: 131 IANNTSIIQDEVLAHRLGLIPIKVDPRLFEYMSENDVPNEKNTIVFKLHVRCTKGSDRLR 190
Query: 360 VKSEELKWQPTGSMFALELDNKGSSSTAAPKTYTNYKSSQDKQPEFTNNPIHPKYPDITI 539
V S ELKW P GS L ++ SSS+A PKTYT++ SQD +PEF++ PI PK DI +
Sbjct: 191 VLSSELKWLPNGSELILGTEHSASSSSAKPKTYTSFSCSQDTRPEFSDEPIAPKDADIIV 250
Query: 540 ARIGPGQEIELEAHAIKGIGKEHAKWSPVATAWYRMLPEVVLLQDIYDEKAEKLVNKCPT 719
A++GPGQEIELEAHA+KG+GK HAKWSPVATAWYRMLPEV+LL+DI D++AE LV KCP
Sbjct: 251 AKLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLRDIEDDEAEALVKKCPL 310
Query: 720 NVFDIEDTPAGKK-ASVSRSRACTLCRECIREEGWDEYVALRRKKDHFIFTIESTGALPP 896
VFDIED GKK A+V+R RACTLCRECIREEGWD+ VALRR DHFIFTIESTGALPP
Sbjct: 311 KVFDIEDIGKGKKRATVARPRACTLCRECIREEGWDKNVALRRVNDHFIFTIESTGALPP 370
Query: 897 EVLFTEAVKILEDKCER 947
EVLFTEAVKILE+KCER
Sbjct: 371 EVLFTEAVKILEEKCER 387
>gb|EOY11970.1| RNA polymerase I subunit 43 isoform 2 [Theobroma cacao]
Length = 311
Score = 452 bits (1162), Expect = e-124
Identities = 221/302 (73%), Positives = 254/302 (84%), Gaps = 1/302 (0%)
Frame = +3
Query: 45 FKVVINRLTEDDIEFELIGIDAALANAFRRILISEVPTMAIEKVLIANNTSVVQDEVLSH 224
F V + RLTE+D+EF++IGIDAA+ANAFRRILI+E+PTMAIEKVLIANNTSVVQDEVL+H
Sbjct: 4 FIVEVVRLTEEDMEFDMIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVVQDEVLAH 63
Query: 225 RLGLIPLKVDPRLFSYKSEKDEPNEKNTIVFGLHARCERGGPRRTVKSEELKWQPTGSMF 404
RLGLIP+ VDPRLF Y SE D+PNEKNTIVF LH C+RG PR TVKS+ELKW P GS
Sbjct: 64 RLGLIPISVDPRLFEYMSENDQPNEKNTIVFKLHVHCKRGSPRITVKSDELKWLPNGSEL 123
Query: 405 ALELDNKGSSSTAAPKTYTNYKSSQDKQPEFTNNPIHPKYPDITIARIGPGQEIELEAHA 584
E S S + P+TYT++ SQD PEF NNPI PKYPDI I+++GPGQEIELEAHA
Sbjct: 124 IKESRKVASDSASKPETYTSFSCSQDTLPEFANNPIAPKYPDIIISKLGPGQEIELEAHA 183
Query: 585 IKGIGKEHAKWSPVATAWYRMLPEVVLLQDIYDEKAEKLVNKCPTNVFDIEDTPAGKK-A 761
+KG+GK HAKWSPVATAWYRMLPEVVLL+++ D+ AE L +KCP NVFDIED GKK A
Sbjct: 184 VKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDDLAEGLKSKCPVNVFDIEDLGKGKKRA 243
Query: 762 SVSRSRACTLCRECIREEGWDEYVALRRKKDHFIFTIESTGALPPEVLFTEAVKILEDKC 941
+V+R RACTLCRECIR+E W++ VA+ R KDHFIFTIESTGALPPEVLFTEAVKILEDKC
Sbjct: 244 TVARPRACTLCRECIRDEEWEKRVAIHRVKDHFIFTIESTGALPPEVLFTEAVKILEDKC 303
Query: 942 ER 947
ER
Sbjct: 304 ER 305
>ref|XP_006452630.1| hypothetical protein CICLE_v10008413mg [Citrus clementina]
gi|557555856|gb|ESR65870.1| hypothetical protein
CICLE_v10008413mg [Citrus clementina]
Length = 421
Score = 448 bits (1153), Expect = e-123
Identities = 229/318 (72%), Positives = 264/318 (83%), Gaps = 3/318 (0%)
Frame = +3
Query: 3 LGVDNST-LETFFKDFKVVINRLTEDDIEFELIGIDAALANAFRRILISEVPTMAIEKVL 179
+GVDNS L+ F +F+V + RLT+DD+EF+LIGIDAA+ANAFRRILI+E+PTMAIEKVL
Sbjct: 100 MGVDNSLQLDHFCNNFRVEVIRLTKDDMEFDLIGIDAAIANAFRRILIAELPTMAIEKVL 159
Query: 180 IANNTSVVQDEVLSHRLGLIPLKVDPRLFSYKSEKDEPNEKNTIVFGLHARCERGGPRRT 359
IANNTSV+QDEVL+HRLGLIP+ VDPRLF Y SE D NEKNTIVF LH CERGGPR T
Sbjct: 160 IANNTSVIQDEVLAHRLGLIPIIVDPRLFEYMSENDTSNEKNTIVFKLHVLCERGGPRLT 219
Query: 360 VKSEELKWQPTGSMFALELDNKGSSSTAAPKTYTNYKSSQDKQPEFTNNPIHPKYPDITI 539
VK+ ELKW P GS LE S+ ++ P+TYT++ SSQD PEF+NNPI P DITI
Sbjct: 220 VKTNELKWLPNGSELPLE-TKPDSNPSSKPRTYTSFSSSQDLLPEFSNNPIRPML-DITI 277
Query: 540 ARIGPGQEIELEAHAIKGIGKEHAKWSPVATAWYRMLPEVVLLQDIYDEKAEKLVNKCPT 719
AR+GPGQEIELEAHA+KGIGK HAKWSPVATAWYRMLPE+VLL+D+ DE AEKLV CP
Sbjct: 278 ARLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEIVLLEDVEDEDAEKLVKTCPV 337
Query: 720 NVFDIEDTPAGKK-ASVSRSRACTLCRECIR-EEGWDEYVALRRKKDHFIFTIESTGALP 893
NVFDIED +GKK A+V+R RACTLCREC+R E W++ V++RR KDHFIFTIESTGAL
Sbjct: 338 NVFDIEDIGSGKKRATVARPRACTLCRECLRCGEEWEKRVSIRRVKDHFIFTIESTGALS 397
Query: 894 PEVLFTEAVKILEDKCER 947
PE LFTEAVKILEDKCER
Sbjct: 398 PETLFTEAVKILEDKCER 415
>ref|XP_006474843.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Citrus sinensis]
Length = 382
Score = 447 bits (1149), Expect = e-123
Identities = 228/318 (71%), Positives = 263/318 (82%), Gaps = 3/318 (0%)
Frame = +3
Query: 3 LGVDNST-LETFFKDFKVVINRLTEDDIEFELIGIDAALANAFRRILISEVPTMAIEKVL 179
+GVDNS L+ F +F+V + RLT+DD+EF+LIGIDAA+ANAFRRILI+E+PTMAIEKVL
Sbjct: 61 MGVDNSLQLDHFCNNFRVEVIRLTKDDMEFDLIGIDAAIANAFRRILIAELPTMAIEKVL 120
Query: 180 IANNTSVVQDEVLSHRLGLIPLKVDPRLFSYKSEKDEPNEKNTIVFGLHARCERGGPRRT 359
IANNTSV+QDEVL+HRLGLIP+ VDPRLF Y SE D NEKNTIVF LH CERGGPR T
Sbjct: 121 IANNTSVIQDEVLAHRLGLIPIIVDPRLFEYMSENDTSNEKNTIVFKLHVLCERGGPRLT 180
Query: 360 VKSEELKWQPTGSMFALELDNKGSSSTAAPKTYTNYKSSQDKQPEFTNNPIHPKYPDITI 539
VK+ ELKW P GS LE S+ + P+TYT++ SSQD PEF+NNPI P DITI
Sbjct: 181 VKTNELKWLPNGSELPLE-TKPDSNPLSKPRTYTSFSSSQDSLPEFSNNPIRPML-DITI 238
Query: 540 ARIGPGQEIELEAHAIKGIGKEHAKWSPVATAWYRMLPEVVLLQDIYDEKAEKLVNKCPT 719
AR+GPGQEIELEAHA+KGIGK HAKWSPVATAWYRMLPE+VLL+D+ DE AEKLV CP
Sbjct: 239 ARLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEIVLLEDVEDEDAEKLVKTCPV 298
Query: 720 NVFDIEDTPAGKK-ASVSRSRACTLCRECIR-EEGWDEYVALRRKKDHFIFTIESTGALP 893
NVFDIED +GKK A+V++ RACTLCREC+R E W++ V++RR KDHFIFTIESTGAL
Sbjct: 299 NVFDIEDIGSGKKRATVAQPRACTLCRECLRCGEEWEKRVSIRRVKDHFIFTIESTGALS 358
Query: 894 PEVLFTEAVKILEDKCER 947
PE LFTEAVKILEDKCER
Sbjct: 359 PETLFTEAVKILEDKCER 376
>ref|XP_004148257.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Cucumis sativus] gi|449522768|ref|XP_004168398.1|
PREDICTED: DNA-directed RNA polymerases I and III subunit
RPAC1-like [Cucumis sativus]
Length = 391
Score = 434 bits (1115), Expect = e-119
Identities = 222/317 (70%), Positives = 255/317 (80%), Gaps = 2/317 (0%)
Frame = +3
Query: 3 LGVDNST-LETFFKDFKVVINRLTEDDIEFELIGIDAALANAFRRILISEVPTMAIEKVL 179
+G DNS L+ F +FK+ + L EDDIEF++IGID ALANAFRRILISEVPTMAIEKVL
Sbjct: 72 MGFDNSLRLDNFRNNFKIEVIDLKEDDIEFDMIGIDPALANAFRRILISEVPTMAIEKVL 131
Query: 180 IANNTSVVQDEVLSHRLGLIPLKVDPRLFSYKSEKDEPNEKNTIVFGLHARCERGGPRRT 359
ANNTS+VQDEVL+HRLGL+P++VDPRLF Y S+KD PNE NTIVF LHA CERG PR T
Sbjct: 132 FANNTSIVQDEVLAHRLGLVPIRVDPRLFKY-SDKDAPNENNTIVFRLHACCERGKPRLT 190
Query: 360 VKSEELKWQPTGSMFALELDNKGSSSTAAPKTYTNYKSSQDK-QPEFTNNPIHPKYPDIT 536
V S+ L W P GS F L D S S + PKTYT++ SQ+ EF+NNPI PK DI
Sbjct: 191 VTSKALTWLPNGSEFPLVSDK--SVSNSKPKTYTSFSCSQNTLSKEFSNNPIGPKDSDII 248
Query: 537 IARIGPGQEIELEAHAIKGIGKEHAKWSPVATAWYRMLPEVVLLQDIYDEKAEKLVNKCP 716
+AR+GPGQEIELEAHA+KG+GK HAKWSPVATAWYRMLPEVVL+++I DE AE+L KCP
Sbjct: 249 LARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLMEEIEDELAEELEKKCP 308
Query: 717 TNVFDIEDTPAGKKASVSRSRACTLCRECIREEGWDEYVALRRKKDHFIFTIESTGALPP 896
NVFDIED K+A+V+R R CTLCRECIR + W++ VALRR KDHFIF IESTGALPP
Sbjct: 309 VNVFDIEDIAGKKRATVARPRDCTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPP 368
Query: 897 EVLFTEAVKILEDKCER 947
EVLFTEAVKILEDKCER
Sbjct: 369 EVLFTEAVKILEDKCER 385
>gb|EPS59249.1| hypothetical protein M569_15560, partial [Genlisea aurea]
Length = 364
Score = 428 bits (1100), Expect = e-117
Identities = 211/316 (66%), Positives = 258/316 (81%), Gaps = 2/316 (0%)
Frame = +3
Query: 3 LGVDNST-LETFFKDFKVVINRLTEDDIEFELIGIDAALANAFRRILISEVPTMAIEKVL 179
+GVDNS ++F ++F+V I + E DIEF+LIGIDAA+ANAFRRILI+E+PTMAIEKVL
Sbjct: 45 MGVDNSLPFDSFRENFRVEIVSMDEHDIEFDLIGIDAAIANAFRRILIAELPTMAIEKVL 104
Query: 180 IANNTSVVQDEVLSHRLGLIPLKVDPRLFSYKSEKDEPNEKNTIVFGLHARCERGGPRRT 359
IANNTSV+ DEVLSHRLGLIPLKVDPR FS+ SE DEPNEKNT+VF LH CER G R+T
Sbjct: 105 IANNTSVIPDEVLSHRLGLIPLKVDPRPFSFMSEHDEPNEKNTVVFKLHVSCERKGSRKT 164
Query: 360 VKSEELKWQPTGSMFALELDNKGSSSTAAPKTYTNYKSSQDKQPEFTNNPIHPKYPDITI 539
VK++ELKW P GS LE + +ST+ +TYT++ SQD PEF+ + + P +ITI
Sbjct: 165 VKTDELKWLPNGSELRLETERPNINSTSKIQTYTSFNCSQDSMPEFSGSTLRPTSDEITI 224
Query: 540 ARIGPGQEIELEAHAIKGIGKEHAKWSPVATAWYRMLPEVVLLQDIYDEKAEKLVNKCPT 719
AR+GPGQEIELEAHA+KG+GK HAKWSPVATAWYR+LPE+ LL +I ++KA++LV KCP
Sbjct: 225 ARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRLLPEIALLDEIKNKKAKELVKKCPQ 284
Query: 720 NVFDIEDTPA-GKKASVSRSRACTLCRECIREEGWDEYVALRRKKDHFIFTIESTGALPP 896
VFDIED G +A+V+R R C+LCRECIR+E W++ V++RR KDHFIF IESTGALPP
Sbjct: 285 KVFDIEDAGGDGIRATVARPRNCSLCRECIRDEEWEKLVSVRRVKDHFIFKIESTGALPP 344
Query: 897 EVLFTEAVKILEDKCE 944
EVLFTEAVKILE+KCE
Sbjct: 345 EVLFTEAVKILEEKCE 360
>ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, putative [Ricinus
communis] gi|223538024|gb|EEF39637.1| DNA-directed RNA
polymerase I/III subunits, putative [Ricinus communis]
Length = 374
Score = 428 bits (1100), Expect = e-117
Identities = 219/317 (69%), Positives = 251/317 (79%), Gaps = 2/317 (0%)
Frame = +3
Query: 3 LGVDNST-LETFFKDFKVVINRLTEDDIEFELIGIDAALANAFRRILISEVPTMAIEKVL 179
+GVDNS L+ F +FKV + +LT+DD+EF++IGIDAA+ANAFRRILISE+PTMAIEKVL
Sbjct: 60 IGVDNSLQLDCFRDNFKVEVIQLTKDDMEFDMIGIDAAIANAFRRILISELPTMAIEKVL 119
Query: 180 IANNTSVVQDEVLSHRLGLIPLKVDPRLFSYKSEKDEPNEKNTIVFGLHARCERGGPRRT 359
IANNTS++QDEVL+HRLGLIP+ DPRLF Y S D PNEKNTIVF LHA C+RG PRRT
Sbjct: 120 IANNTSLIQDEVLAHRLGLIPINADPRLFEYLSANDTPNEKNTIVFKLHASCKRGEPRRT 179
Query: 360 VKSEELKWQPTGSMFALELDNKGSSSTAAPKTYTNYKSSQDKQPEFTNNPIHPKYPDITI 539
V SEELKW P GS E + S P TYT++ QD F P+ P I +
Sbjct: 180 VYSEELKWLPGGSQLLKESEKADSK----PSTYTSFTDKQD----FIPKPVSPSEDKIIV 231
Query: 540 ARIGPGQEIELEAHAIKGIGKEHAKWSPVATAWYRMLPEVVLLQDIYDEKAEKLVNKCPT 719
A++GPGQEIELEAHA+KG+GK HAKWSPVATAWYRMLPEVVLL+DI DE AE+L KCP
Sbjct: 232 AKLGPGQEIELEAHAVKGLGKTHAKWSPVATAWYRMLPEVVLLEDIEDEIAEELTKKCPV 291
Query: 720 NVFDIEDTPAGKK-ASVSRSRACTLCRECIREEGWDEYVALRRKKDHFIFTIESTGALPP 896
NVFDIED GKK A+V+R RACTLCRECIR WD+ V+LRR KDHFIFTIESTGALPP
Sbjct: 292 NVFDIEDIGNGKKRATVARPRACTLCRECIRGGEWDKRVSLRRVKDHFIFTIESTGALPP 351
Query: 897 EVLFTEAVKILEDKCER 947
EVLFTEAVK+LEDKCER
Sbjct: 352 EVLFTEAVKVLEDKCER 368
>gb|EMJ06508.1| hypothetical protein PRUPE_ppa006811mg [Prunus persica]
Length = 394
Score = 426 bits (1096), Expect = e-117
Identities = 213/315 (67%), Positives = 256/315 (81%), Gaps = 2/315 (0%)
Frame = +3
Query: 9 VDNSTLETFFKDFKVVINRLTEDDIEFELIGIDAALANAFRRILISEVPTMAIEKVLIAN 188
V+NS L+ F +F+V + RLTED++EF++IGID ALANAFRRILISEVPTMAIEKVLIAN
Sbjct: 75 VENSFLDNFCDNFRVEVIRLTEDEMEFDMIGIDPALANAFRRILISEVPTMAIEKVLIAN 134
Query: 189 NTSVVQDEVLSHRLGLIPLKVDPRLFSYKSEKDEPNEKNTIVFGLHARCERGGPRRTVKS 368
NTSV+QDEVL+HRLGLIP+K DPRLF Y +E + +EKNTIVF LH CER G R +VKS
Sbjct: 135 NTSVIQDEVLAHRLGLIPIKADPRLFEY-AENNTASEKNTIVFKLHVCCERSGQRLSVKS 193
Query: 369 EELKWQPTGSMFALELDNKGSSSTAAPKTYTNYKSSQDKQPEFTNNPIHPKYPDITIARI 548
+EL W P GS F LE + + S++ PKTYT++ SQD PEF++NPI P DI IAR+
Sbjct: 194 KELIWLPNGSEFPLESQDSKTGSSSKPKTYTSFTCSQDSLPEFSSNPIAPALGDILIARL 253
Query: 549 GPGQEIELEAHAIKGIGKEHAKWSPVATAWYRMLPEVVLLQDIYDEKAEKLVNKCPTNVF 728
GPGQEIELEAHA+KGIGK H+KWSPV WY+MLPE+VLL+DI D++AEKLV CP VF
Sbjct: 254 GPGQEIELEAHAVKGIGKTHSKWSPVTPVWYKMLPEIVLLEDIEDQQAEKLVAICPVKVF 313
Query: 729 DIEDTPAGKK-ASVSRSRACTLCRECIRE-EGWDEYVALRRKKDHFIFTIESTGALPPEV 902
DIED GKK A+V+R RACTLCRECIRE +GW+ ++L+RKKDHFIFTIES+G PPEV
Sbjct: 314 DIEDIGKGKKRATVARPRACTLCRECIREGKGWENAISLQRKKDHFIFTIESSGVFPPEV 373
Query: 903 LFTEAVKILEDKCER 947
L TEAVKILE+KC+R
Sbjct: 374 LVTEAVKILEEKCDR 388
>ref|XP_004488284.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Cicer arietinum]
Length = 388
Score = 426 bits (1094), Expect = e-116
Identities = 212/319 (66%), Positives = 258/319 (80%), Gaps = 4/319 (1%)
Frame = +3
Query: 3 LGVDNST-LETFFKDFKVVINRLTEDDIEFELIGIDAALANAFRRILISEVPTMAIEKVL 179
LGVDNS L++F ++FKV + +LT+DDIEF++IGID +LANAFRRILI+EVPTMAIE+V
Sbjct: 66 LGVDNSVRLDSFCRNFKVEVKKLTDDDIEFDMIGIDPSLANAFRRILIAEVPTMAIERVY 125
Query: 180 IANNTSVVQDEVLSHRLGLIPLKVDPRLFSYKSEKD-EPNEKNTIVFGLHARCERGGPRR 356
IANNTS++QDEVLSHRLGLIP+ DP LF Y E NEKNTIVF LH RCE+G PR
Sbjct: 126 IANNTSIIQDEVLSHRLGLIPINADPTLFEYPDNAGGENNEKNTIVFKLHVRCEKGQPRI 185
Query: 357 TVKSEELKWQPTGSMFALELDNKGSSSTAAPKTYTNYKSSQDKQPEFTNNPIHPKYPDIT 536
VKS+ELKW P GS L D+ ++ + PKT+T++ SQD PEF+ P+ P YPDI
Sbjct: 186 IVKSDELKWLPNGS--DLIADDTKPNAGSKPKTFTSFSCSQDSLPEFSKRPLGPTYPDII 243
Query: 537 IARIGPGQEIELEAHAIKGIGKEHAKWSPVATAWYRMLPEVVLLQDIYDEKAEKLVNKCP 716
+A++GPGQEIELE HA+KG+GK HAKWSPVATAWYRMLPEVVL++D+ DE A++LV KCP
Sbjct: 244 LAKLGPGQEIELEVHAVKGVGKTHAKWSPVATAWYRMLPEVVLMEDVKDELADELVTKCP 303
Query: 717 TNVFDIEDTPAG-KKASVSRSRACTLCRECIR-EEGWDEYVALRRKKDHFIFTIESTGAL 890
NVFDIED G K+A+V + RACTLCRECIR + W++ V+LRR KDHFIFTIESTGA+
Sbjct: 304 VNVFDIEDIGKGRKRATVVKPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAI 363
Query: 891 PPEVLFTEAVKILEDKCER 947
PP+VLFT+AVKILEDKCER
Sbjct: 364 PPDVLFTQAVKILEDKCER 382
>ref|XP_004498147.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Cicer arietinum]
Length = 388
Score = 424 bits (1090), Expect = e-116
Identities = 213/319 (66%), Positives = 257/319 (80%), Gaps = 4/319 (1%)
Frame = +3
Query: 3 LGVDNST-LETFFKDFKVVINRLTEDDIEFELIGIDAALANAFRRILISEVPTMAIEKVL 179
LGVDNS L++F ++FKV + +LT+DDIEF++IGID +LANAFRRILI+EVPTMAIE+V
Sbjct: 66 LGVDNSVRLDSFCQNFKVEVKKLTDDDIEFDMIGIDPSLANAFRRILIAEVPTMAIERVY 125
Query: 180 IANNTSVVQDEVLSHRLGLIPLKVDPRLFSYKSEKD-EPNEKNTIVFGLHARCERGGPRR 356
IANNTS++QDEVLSHRLGLIP+ DP LF Y E NEKNTIVF LH RCE+G PR
Sbjct: 126 IANNTSIIQDEVLSHRLGLIPINADPTLFEYPDNAGGENNEKNTIVFKLHVRCEKGQPRI 185
Query: 357 TVKSEELKWQPTGSMFALELDNKGSSSTAAPKTYTNYKSSQDKQPEFTNNPIHPKYPDIT 536
TVKS+ELKW P GS L D+ ++ + PKT+T++ SQD PEF+ P+ P PDI
Sbjct: 186 TVKSDELKWLPNGS--DLIADDTKPNAGSKPKTFTSFSCSQDSLPEFSKKPLGPTNPDII 243
Query: 537 IARIGPGQEIELEAHAIKGIGKEHAKWSPVATAWYRMLPEVVLLQDIYDEKAEKLVNKCP 716
+A++GPGQEIELE HA+KG+GK HAKWSPVATAWYRMLPEVVL +D+ DE A++LV KCP
Sbjct: 244 LAKLGPGQEIELEVHAVKGVGKTHAKWSPVATAWYRMLPEVVLTEDVTDELADELVTKCP 303
Query: 717 TNVFDIEDTPAG-KKASVSRSRACTLCRECIR-EEGWDEYVALRRKKDHFIFTIESTGAL 890
NVFDIED G K+A+V + RACTLCRECIR + W++ V+LRR KDHFIFTIESTGA+
Sbjct: 304 VNVFDIEDIGKGRKRATVVKPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAI 363
Query: 891 PPEVLFTEAVKILEDKCER 947
PPEVLFT+AVKILEDKCER
Sbjct: 364 PPEVLFTQAVKILEDKCER 382
>ref|NP_001242652.1| uncharacterized protein LOC100786622 [Glycine max]
gi|255637183|gb|ACU18922.1| unknown [Glycine max]
Length = 388
Score = 424 bits (1089), Expect = e-116
Identities = 221/321 (68%), Positives = 258/321 (80%), Gaps = 6/321 (1%)
Frame = +3
Query: 3 LGVDNST-LETFFKDFKVVINRLTEDDIEFELIGIDAALANAFRRILISEVPTMAIEKVL 179
LGVDNS L++F ++FKV + RLT+ DIEF++IGID A+ANAFRRILI+EVPTMAIE+V
Sbjct: 66 LGVDNSVRLDSFCENFKVEVKRLTDSDIEFDMIGIDPAIANAFRRILIAEVPTMAIERVY 125
Query: 180 IANNTSVVQDEVLSHRLGLIPLKVDPRLFSY-KSEKDEPNEKNTIVFGLHARCERGGPRR 356
IANNTSVVQDEVLSHRLGLIP++ DPRLF Y ++ D+ NEKNTIVF LH RC+ G PR
Sbjct: 126 IANNTSVVQDEVLSHRLGLIPIRADPRLFEYPENAGDDKNEKNTIVFKLHVRCQVGQPRI 185
Query: 357 TVKSEELKWQPTGSMFALE--LDNKGSSSTAAPKTYTNYKSSQDKQPEFTNNPIHPKYPD 530
TVKS++LKW P GS E N GS PKT+T++ SQD PEF+NN I Y D
Sbjct: 186 TVKSDKLKWLPNGSELPCEGVKPNAGSK----PKTFTSFTCSQDSLPEFSNNSIGLTYSD 241
Query: 531 ITIARIGPGQEIELEAHAIKGIGKEHAKWSPVATAWYRMLPEVVLLQDIYDEKAEKLVNK 710
I +A++GPGQEIELEAHA+KGIGK HAKWSPVATAWYRMLPEVVLL+ + DE AE+L NK
Sbjct: 242 IILAKLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEVVLLEAVEDELAEELKNK 301
Query: 711 CPTNVFDIEDTPAGK-KASVSRSRACTLCRECIR-EEGWDEYVALRRKKDHFIFTIESTG 884
CP NVFDIED GK +A V+R R CTLCRECIR + W++ V+LRR K+HFIFTIESTG
Sbjct: 302 CPVNVFDIEDIGKGKRRAKVARPRDCTLCRECIRGGKEWEDRVSLRRVKNHFIFTIESTG 361
Query: 885 ALPPEVLFTEAVKILEDKCER 947
ALPPEVLFTEAVKILEDKCER
Sbjct: 362 ALPPEVLFTEAVKILEDKCER 382
>ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
[Glycine max]
Length = 393
Score = 422 bits (1086), Expect = e-115
Identities = 216/319 (67%), Positives = 259/319 (81%), Gaps = 4/319 (1%)
Frame = +3
Query: 3 LGVDNST-LETFFKDFKVVINRLTEDDIEFELIGIDAALANAFRRILISEVPTMAIEKVL 179
+GVDNS L++F ++FKV + RLT+ DIEF++IGID A+ANAFRRILI+EVPTMAIE+V
Sbjct: 71 MGVDNSVRLDSFCENFKVEVKRLTDSDIEFDMIGIDPAIANAFRRILIAEVPTMAIERVY 130
Query: 180 IANNTSVVQDEVLSHRLGLIPLKVDPRLFSY-KSEKDEPNEKNTIVFGLHARCERGGPRR 356
IANNTSVVQDEVLSHRLGLIP++ DPRLF Y ++ D+ NEKNTIVF LH RC+ G PR
Sbjct: 131 IANNTSVVQDEVLSHRLGLIPIRADPRLFEYPENAGDDKNEKNTIVFKLHVRCQVGQPRI 190
Query: 357 TVKSEELKWQPTGSMFALELDNKGSSSTAAPKTYTNYKSSQDKQPEFTNNPIHPKYPDIT 536
TVKS++LKW P GS L ++ ++ + PKT+T++ SQD PEF+NN I Y DI
Sbjct: 191 TVKSDKLKWLPNGS--ELPCEDVKPNAGSKPKTFTSFTCSQDSLPEFSNNSIGLTYSDII 248
Query: 537 IARIGPGQEIELEAHAIKGIGKEHAKWSPVATAWYRMLPEVVLLQDIYDEKAEKLVNKCP 716
+A++GPGQEIELEAHA+KG GK HAKWSPVAT WYRMLPEVVLL+D+ DE AE+L NKCP
Sbjct: 249 LAKLGPGQEIELEAHAVKGTGKTHAKWSPVATTWYRMLPEVVLLKDVEDELAEELKNKCP 308
Query: 717 TNVFDIEDTPAGK-KASVSRSRACTLCRECIR-EEGWDEYVALRRKKDHFIFTIESTGAL 890
NVFDIED GK +A V+R R CTLCRECIR + W++ V+LRR K+HFIFTIESTGAL
Sbjct: 309 VNVFDIEDIGKGKRRAKVARPRDCTLCRECIRGGKEWEDRVSLRRVKNHFIFTIESTGAL 368
Query: 891 PPEVLFTEAVKILEDKCER 947
PPEVLFTEAVKILEDKCER
Sbjct: 369 PPEVLFTEAVKILEDKCER 387
>ref|XP_002300385.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222847643|gb|EEE85190.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 390
Score = 419 bits (1076), Expect = e-114
Identities = 217/318 (68%), Positives = 252/318 (79%), Gaps = 3/318 (0%)
Frame = +3
Query: 3 LGVDNST-LETFFKDFKVVINRLTEDDIEFELIGIDAALANAFRRILISEVPTMAIEKVL 179
+GVDNS L++F ++F++ + L +D +EF++IGIDAA+ANAFRRILISEVPTMAIEKV
Sbjct: 72 MGVDNSLRLDSFRENFRIKVIALDKDKMEFDMIGIDAAVANAFRRILISEVPTMAIEKVF 131
Query: 180 IANNTSVVQDEVLSHRLGLIPLKVDPRLFSYKSEKDEPNEKNTIVFGLHARCERGGPRRT 359
IANNTSV+QDEVL+HRLGLIP+KVDPRLF Y S D PNEKNTIV LHARC RG PR +
Sbjct: 132 IANNTSVIQDEVLAHRLGLIPIKVDPRLFEYLSANDTPNEKNTIVLKLHARCNRGQPRCS 191
Query: 360 VKSEELKWQPTGSMFALELDNKGSSSTAAPKTYTNYKSSQDKQPEFTNNPIHPKYPDITI 539
V S+ELKW P GS FA E + S P TYT++ QD PEF NPI DI +
Sbjct: 192 VYSQELKWLPNGSEFAKESEKPDSK----PSTYTSFSCGQDSLPEFAGNPI-STVEDIIL 246
Query: 540 ARIGPGQEIELEAHAIKGIGKEHAKWSPVATAWYRMLPEVVLLQDIYDEKAEKLVNKCPT 719
A++GPGQEIELEAHA+KG+GK HAKWSPV TAWYRM PEVVLL++I E AE+L+ KCP+
Sbjct: 247 AKLGPGQEIELEAHAVKGMGKTHAKWSPVGTAWYRMFPEVVLLENIKGEDAEELIRKCPS 306
Query: 720 NVFDIEDT-PAGKKASVSRSRACTLCRECIR-EEGWDEYVALRRKKDHFIFTIESTGALP 893
VFDIEDT A KKA V+ SRACTLCRECIR +E W++ VAL R KDHFIFTIESTGALP
Sbjct: 307 GVFDIEDTGNAKKKAIVADSRACTLCRECIRGDEEWEKRVALHRVKDHFIFTIESTGALP 366
Query: 894 PEVLFTEAVKILEDKCER 947
PEVLFTEAVKILE KCER
Sbjct: 367 PEVLFTEAVKILEAKCER 384
>gb|ESW18590.1| hypothetical protein PHAVU_006G053600g [Phaseolus vulgaris]
Length = 386
Score = 415 bits (1066), Expect = e-113
Identities = 215/319 (67%), Positives = 258/319 (80%), Gaps = 4/319 (1%)
Frame = +3
Query: 3 LGVDNST-LETFFKDFKVVINRLTEDDIEFELIGIDAALANAFRRILISEVPTMAIEKVL 179
LGVDNS + F ++FKV + RLT+ D+EF++IGID A+ANAFRRILISEVPTMAIE+V
Sbjct: 64 LGVDNSQQFDRFRENFKVEVKRLTDSDMEFDMIGIDPAIANAFRRILISEVPTMAIERVY 123
Query: 180 IANNTSVVQDEVLSHRLGLIPLKVDPRLFSYK-SEKDEPNEKNTIVFGLHARCERGGPRR 356
IANNTS+VQDEVLSHRLGLIP+++DPRLF Y S D+ NEKNTIVF LH RC G PR
Sbjct: 124 IANNTSIVQDEVLSHRLGLIPIRIDPRLFEYPDSAGDDNNEKNTIVFRLHERCRVGQPRI 183
Query: 357 TVKSEELKWQPTGSMFALELDNKGSSSTAAPKTYTNYKSSQDKQPEFTNNPIHPKYPDIT 536
TVKS++LKW P GS E D K ++S+ PKT+T++ SQ+ PEF++N + DI
Sbjct: 184 TVKSDKLKWLPNGSELPSE-DVKPNTSSK-PKTFTSFTCSQNSLPEFSSNSLELTDSDII 241
Query: 537 IARIGPGQEIELEAHAIKGIGKEHAKWSPVATAWYRMLPEVVLLQDIYDEKAEKLVNKCP 716
+A++GPGQEIELEAHA+KGIG+ HAKWSPVATAWYRMLPEVVLL+D DE+AEKLVNKC
Sbjct: 242 LAKLGPGQEIELEAHAVKGIGRTHAKWSPVATAWYRMLPEVVLLEDFVDEQAEKLVNKCE 301
Query: 717 TNVFDIEDTPAGK-KASVSRSRACTLCRECIR-EEGWDEYVALRRKKDHFIFTIESTGAL 890
NVFDIED GK +A+V+R R CTLCRECIR + W++ +++RR K HFIFTIESTGAL
Sbjct: 302 PNVFDIEDIGKGKRRATVARPRNCTLCRECIRGGKEWEDRISIRRVKHHFIFTIESTGAL 361
Query: 891 PPEVLFTEAVKILEDKCER 947
PPEVLFTEAVKILEDKCER
Sbjct: 362 PPEVLFTEAVKILEDKCER 380
>ref|NP_176261.1| RNA polymerase I subunit 43 [Arabidopsis thaliana]
gi|14423464|gb|AAK62414.1|AF386969_1 RNA polymerase
subunit (isoform B) [Arabidopsis thaliana]
gi|514324|gb|AAB00529.1| RNA polymerase subunit
[Arabidopsis thaliana] gi|2462755|gb|AAB71974.1| RNA
polymerase subunit (isoform B) [Arabidopsis thaliana]
gi|24899667|gb|AAN65048.1| RNA polymerase subunit
(isoform B) [Arabidopsis thaliana]
gi|332195585|gb|AEE33706.1| RNA polymerase I subunit 43
[Arabidopsis thaliana] gi|1586550|prf||2204246B RNA
polymerase
Length = 385
Score = 412 bits (1060), Expect = e-112
Identities = 208/318 (65%), Positives = 247/318 (77%), Gaps = 3/318 (0%)
Frame = +3
Query: 3 LGVDNST-LETFFKDFKVVINRLTEDDIEFELIGIDAALANAFRRILISEVPTMAIEKVL 179
+GVDNS LE F +DFKV + LTE D+ F++IG+ A +ANAFRRIL++E+P+MAIEKV
Sbjct: 66 MGVDNSVRLENFSEDFKVDVISLTETDMVFDMIGVHAGIANAFRRILLAELPSMAIEKVY 125
Query: 180 IANNTSVVQDEVLSHRLGLIPLKVDPRLFSYKSEKDEPNEKNTIVFGLHARCERGGPRRT 359
+ANNTSV+QDEVL+HRLGLIP+ DPRLF Y SE D+PNEKNTIVF LH +C +G PRR
Sbjct: 126 VANNTSVIQDEVLAHRLGLIPIAADPRLFEYLSENDQPNEKNTIVFKLHVKCLKGDPRRK 185
Query: 360 VKSEELKWQPTGSMFALELDNKGSSSTAAPKTYTNYKSSQDKQPEFTNNPIHPKYPDITI 539
V + ELKW P GS EL + ST PKTYT++ SQD PEF NPI P DI I
Sbjct: 186 VLTSELKWLPNGS----ELIKESGGSTTTPKTYTSFNHSQDSFPEFAENPIRPTLKDILI 241
Query: 540 ARIGPGQEIELEAHAIKGIGKEHAKWSPVATAWYRMLPEVVLLQDIYDEKAEKLVNKCPT 719
A++GPGQEIELEAHA+KGIGK HAKWSPVATAWYRMLPEVVLL++ + AE+LV CP
Sbjct: 242 AKLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEVVLLKEFEGKHAEELVKVCPK 301
Query: 720 NVFDIEDTPAG-KKASVSRSRACTLCRECIRE-EGWDEYVALRRKKDHFIFTIESTGALP 893
VFDIED G K+A+V+R R C+LCRECIR+ W++ V LRR K+HFIFTIESTG+ P
Sbjct: 302 KVFDIEDMGQGRKRATVARPRDCSLCRECIRDGVEWEDQVDLRRVKNHFIFTIESTGSQP 361
Query: 894 PEVLFTEAVKILEDKCER 947
PEVLF EAVKILEDKCER
Sbjct: 362 PEVLFNEAVKILEDKCER 379
>ref|XP_006392109.1| hypothetical protein EUTSA_v10023529mg [Eutrema salsugineum]
gi|557088615|gb|ESQ29395.1| hypothetical protein
EUTSA_v10023529mg [Eutrema salsugineum]
Length = 376
Score = 411 bits (1057), Expect = e-112
Identities = 208/317 (65%), Positives = 247/317 (77%), Gaps = 2/317 (0%)
Frame = +3
Query: 3 LGVDNST-LETFFKDFKVVINRLTEDDIEFELIGIDAALANAFRRILISEVPTMAIEKVL 179
+GVD S L+ F++DFKV + TE D+EF++IGIDAA ANAFRRILI+EVPTMAIEKVL
Sbjct: 58 VGVDESVKLKNFYEDFKVDVISCTETDMEFDMIGIDAAFANAFRRILIAEVPTMAIEKVL 117
Query: 180 IANNTSVVQDEVLSHRLGLIPLKVDPRLFSYKSEKDEPNEKNTIVFGLHARCERGGPRRT 359
IA NTSV+ DEVL+HR+GLIP+ VDPRLF Y SE D+PNEKNTIVF LH +C +G PR
Sbjct: 118 IAYNTSVIIDEVLAHRIGLIPIAVDPRLFEYLSENDQPNEKNTIVFKLHVKCPKGAPRLR 177
Query: 360 VKSEELKWQPTGSMFALELDNKGSSSTAAPKTYTNYKSSQDKQPEFTNNPIHPKYPDITI 539
V + EL W P GS F E S + PKTYT++ SQD PEF NNPI P + DI I
Sbjct: 178 VLTNELIWLPNGSEFLKE----SGGSNSKPKTYTSFSCSQDSLPEFANNPIAPSHLDILI 233
Query: 540 ARIGPGQEIELEAHAIKGIGKEHAKWSPVATAWYRMLPEVVLLQDIYDEKAEKLVNKCPT 719
A++ PGQEIELEAHAIKGIGK HAKWSPV TAWYRMLPEVVLL ++ +E+AE+LV CP
Sbjct: 234 AKLSPGQEIELEAHAIKGIGKTHAKWSPVGTAWYRMLPEVVLLGEVENEQAEQLVKACPQ 293
Query: 720 NVFDIEDTPAG-KKASVSRSRACTLCRECIREEGWDEYVALRRKKDHFIFTIESTGALPP 896
NVFDIED G K+A+V++ R CTLC ECIR+ G ++ V LR K+HFIF IESTG+LPP
Sbjct: 294 NVFDIEDMGNGRKRATVAQPRNCTLCSECIRDTGLEDLVDLRSVKNHFIFKIESTGSLPP 353
Query: 897 EVLFTEAVKILEDKCER 947
+VLFTEAVKI+EDKCER
Sbjct: 354 DVLFTEAVKIMEDKCER 370