BLASTX nr result
ID: Achyranthes23_contig00009297
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00009297
(327 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_005089632.1| ycf1 gene product (chloroplast) [Silene lati... 79 6e-13
ref|YP_762318.1| hypothetical chloroplast RF1 [Morus indica] gi|... 77 2e-12
ref|NP_054996.1| ycf1 protein [Spinacia oleracea] gi|118597380|s... 77 3e-12
ref|YP_005089389.1| ycf1 gene product (chloroplast) [Silene vulg... 74 3e-11
gb|ADD30913.1| putative RF1 protein [Berberidopsis corallina] 74 3e-11
ref|YP_009000152.1| hypothetical chloroplast RF19 (chloroplast) ... 73 3e-11
gb|ADD30916.1| putative RF1 protein [Ficus sp. Moore 315] 72 6e-11
ref|YP_008963750.1| hypothetical chloroplast RF19 (chloroplast) ... 72 1e-10
dbj|BAO01719.1| hypothetical chloroplast RF1 (chloroplast) [Viti... 72 1e-10
dbj|BAO01635.1| hypothetical chloroplast RF1 (chloroplast) [Viti... 72 1e-10
dbj|BAO01551.1| hypothetical chloroplast RF1 (chloroplast) [Viti... 72 1e-10
ref|YP_567136.1| hypothetical chloroplast RF1 [Vitis vinifera] g... 72 1e-10
gb|AFI72608.1| Ycf1, partial [Callicarpa japonica] 71 1e-10
gb|ADX62194.1| Ycf1, partial (chloroplast) [Horminum pyrenaicum] 71 2e-10
ref|YP_004072518.1| hypothetical protein ColaC_p079 [Corynocarpu... 71 2e-10
ref|YP_002836148.1| hypothetical chloroplast RF1 [Megaleranthis ... 71 2e-10
ref|YP_398931.1| hypothetical protein NitoCp101 [Nicotiana tomen... 70 2e-10
gb|ADX62269.1| Ycf1, partial (chloroplast) [Salvia axillaris] 70 2e-10
gb|ADX62236.1| Ycf1, partial (chloroplast) [Mentha arvensis] 70 2e-10
ref|YP_007375104.1| hypothetical chloroplast RF19 [Quercus rubra... 70 2e-10
>ref|YP_005089632.1| ycf1 gene product (chloroplast) [Silene latifolia]
gi|329755577|gb|AEC04140.1| hypothetical chloroplast RF19
(chloroplast) [Silene latifolia]
Length = 1883
Score = 79.0 bits (193), Expect = 6e-13
Identities = 43/76 (56%), Positives = 51/76 (67%), Gaps = 7/76 (9%)
Frame = +3
Query: 90 KKMKDLVNRTKTIKNKIEKISKDNRKRNIS-------PSYGTKKFESTKNIDQILKRRNT 248
+K KDL NRT+TIKNKIEK SKD + + YGTK FES +N+ QILKR+ T
Sbjct: 1054 QKKKDLANRTRTIKNKIEKFSKDKIFKTLKLIRQPNKTHYGTKNFESPQNLGQILKRKKT 1113
Query: 249 RLICQSNSIFKFFRER 296
RLI +SN KFFRER
Sbjct: 1114 RLIRKSNYFKKFFRER 1129
>ref|YP_762318.1| hypothetical chloroplast RF1 [Morus indica]
gi|118574756|sp|Q09WW0.1|YCF1_MORIN RecName:
Full=Putative membrane protein ycf1; Short=RF1
gi|78100373|gb|ABB21014.1| hypothetical chloroplast RF1
[Morus indica]
Length = 1879
Score = 77.0 bits (188), Expect = 2e-12
Identities = 44/85 (51%), Positives = 54/85 (63%), Gaps = 9/85 (10%)
Frame = +3
Query: 87 RKKMKDLVNRTKTIKNKIEKISKDNRKRNISP---------SYGTKKFESTKNIDQILKR 239
+KK++DL NRT T N+I+KISKDN+K +SP SY K+ E KNI Q+LKR
Sbjct: 1042 KKKIQDLTNRTNTTINQIQKISKDNKKGFLSPHINISSNKMSYNDKRLELPKNILQLLKR 1101
Query: 240 RNTRLICQSNSIFKFFRERPPRGYF 314
RN RLI +SN KFF ER R F
Sbjct: 1102 RNVRLIRKSNYFIKFFIERIYRNIF 1126
>ref|NP_054996.1| ycf1 protein [Spinacia oleracea] gi|118597380|sp|Q9M3J5.2|YCF1_SPIOL
RecName: Full=Putative membrane protein ycf1
gi|7636170|emb|CAB88792.1| ycf1 protein [Spinacia
oleracea]
Length = 1833
Score = 76.6 bits (187), Expect = 3e-12
Identities = 45/69 (65%), Positives = 48/69 (69%)
Frame = +3
Query: 90 KKMKDLVNRTKTIKNKIEKISKDNRKRNISPSYGTKKFESTKNIDQILKRRNTRLICQSN 269
KKMKDL NRT+ IKNKIEKIS D K +SP K TKN+ QILKRRN RLI SN
Sbjct: 1049 KKMKDLANRTRIIKNKIEKISNDKLK--MSPK---KTRYGTKNLGQILKRRNARLIRNSN 1103
Query: 270 SIFKFFRER 296
I KFFRER
Sbjct: 1104 YILKFFRER 1112
>ref|YP_005089389.1| ycf1 gene product (chloroplast) [Silene vulgaris]
gi|329755742|gb|AEC04303.1| hypothetical chloroplast RF19
(chloroplast) [Silene vulgaris]
Length = 1883
Score = 73.6 bits (179), Expect = 3e-11
Identities = 39/76 (51%), Positives = 51/76 (67%), Gaps = 7/76 (9%)
Frame = +3
Query: 90 KKMKDLVNRTKTIKNKIEKISKDNRKRNIS-------PSYGTKKFESTKNIDQILKRRNT 248
+K KDL NRT+TIK KIE SK+ + + +YGTK FES +N+ Q+LKR+NT
Sbjct: 1061 QKKKDLDNRTRTIKKKIENFSKEKIFKTLKLISQPNKTNYGTKNFESPQNLGQVLKRKNT 1120
Query: 249 RLICQSNSIFKFFRER 296
RLI +SN + FFRER
Sbjct: 1121 RLIRKSNYLKNFFRER 1136
>gb|ADD30913.1| putative RF1 protein [Berberidopsis corallina]
Length = 1909
Score = 73.6 bits (179), Expect = 3e-11
Identities = 42/78 (53%), Positives = 53/78 (67%), Gaps = 9/78 (11%)
Frame = +3
Query: 90 KKMKDLVNRTKTIKNKIEKISKDNRKR------NISP---SYGTKKFESTKNIDQILKRR 242
KKMKDL +RT TI+N+IE+I+KD +K NISP SY K+ ES KNI Q++KRR
Sbjct: 1077 KKMKDLTDRTSTIRNQIERITKDKKKGFLIPEINISPNKTSYDAKRLESPKNIWQVVKRR 1136
Query: 243 NTRLICQSNSIFKFFRER 296
N RLI +S+ KF ER
Sbjct: 1137 NARLIRKSHYFLKFLIER 1154
>ref|YP_009000152.1| hypothetical chloroplast RF19 (chloroplast) [Silene chalcedonica]
gi|555944241|gb|AGZ18143.1| hypothetical chloroplast RF19
(chloroplast) [Silene chalcedonica]
Length = 1797
Score = 73.2 bits (178), Expect = 3e-11
Identities = 43/78 (55%), Positives = 50/78 (64%), Gaps = 9/78 (11%)
Frame = +3
Query: 90 KKMKDLVNRTKTIKNKIEKISKDNRKRNISPS---------YGTKKFESTKNIDQILKRR 242
+K KDL NRT+TIK KIE ISK+N +P Y TK FES +NI QILKR+
Sbjct: 1083 QKKKDLANRTRTIKKKIENISKENFFLYKTPKLISQPNKTHYDTKNFESPQNIGQILKRK 1142
Query: 243 NTRLICQSNSIFKFFRER 296
NTRLI +SN K FRER
Sbjct: 1143 NTRLIRKSNYFKKCFRER 1160
>gb|ADD30916.1| putative RF1 protein [Ficus sp. Moore 315]
Length = 1877
Score = 72.4 bits (176), Expect = 6e-11
Identities = 41/79 (51%), Positives = 53/79 (67%), Gaps = 9/79 (11%)
Frame = +3
Query: 87 RKKMKDLVNRTKTIKNKIEKISKDNRKRNISP---------SYGTKKFESTKNIDQILKR 239
+KK++DL +RT TI N+I+KISKDN+K ISP SY K+ ES K I ++LKR
Sbjct: 1053 KKKIQDLTDRTNTIINQIQKISKDNKKGFISPHINISSNKMSYDDKRVESPKKILRLLKR 1112
Query: 240 RNTRLICQSNSIFKFFRER 296
RN RLI +SN +FF ER
Sbjct: 1113 RNIRLIRKSNYFIRFFIER 1131
>ref|YP_008963750.1| hypothetical chloroplast RF19 (chloroplast) [Liquidambar formosana]
gi|491650429|gb|AGL13489.1| hypothetical chloroplast RF19
(chloroplast) [Liquidambar formosana]
Length = 1878
Score = 71.6 bits (174), Expect = 1e-10
Identities = 42/78 (53%), Positives = 53/78 (67%), Gaps = 9/78 (11%)
Frame = +3
Query: 90 KKMKDLVNRTKTIKNKIEKISKDNRKR------NISP---SYGTKKFESTKNIDQILKRR 242
KK KDL +RT TI+N+IEKI+KD +K NISP S+ +K+ ES + QILKRR
Sbjct: 1063 KKTKDLTDRTSTIRNQIEKITKDKKKEFLTPEINISPNKKSHKSKRLESPQKFWQILKRR 1122
Query: 243 NTRLICQSNSIFKFFRER 296
NTRLI +S+ KFF ER
Sbjct: 1123 NTRLIRKSHYFIKFFIER 1140
>dbj|BAO01719.1| hypothetical chloroplast RF1 (chloroplast) [Vitis vinifera subsp.
caucasica]
Length = 1893
Score = 71.6 bits (174), Expect = 1e-10
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 9/78 (11%)
Frame = +3
Query: 90 KKMKDLVNRTKTIKNKIEKISKDNRKR------NISP---SYGTKKFESTKNIDQILKRR 242
KK+KDL +RT TI+ KIEKI KD +K NISP SY K+ ES K+I QILKRR
Sbjct: 1059 KKVKDLTDRTSTIRKKIEKIIKDKKKLFLTPEINISPNKASYNAKRLESQKSIWQILKRR 1118
Query: 243 NTRLICQSNSIFKFFRER 296
N+RLI + + KFF ER
Sbjct: 1119 NSRLIRKLHYFIKFFIER 1136
>dbj|BAO01635.1| hypothetical chloroplast RF1 (chloroplast) [Vitis vinifera subsp.
caucasica]
Length = 1893
Score = 71.6 bits (174), Expect = 1e-10
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 9/78 (11%)
Frame = +3
Query: 90 KKMKDLVNRTKTIKNKIEKISKDNRKR------NISP---SYGTKKFESTKNIDQILKRR 242
KK+KDL +RT TI+ KIEKI KD +K NISP SY K+ ES K+I QILKRR
Sbjct: 1059 KKVKDLTDRTSTIRKKIEKIIKDKKKLFLTPEINISPNKASYNAKRLESQKSIWQILKRR 1118
Query: 243 NTRLICQSNSIFKFFRER 296
N+RLI + + KFF ER
Sbjct: 1119 NSRLIRKLHYFIKFFIER 1136
>dbj|BAO01551.1| hypothetical chloroplast RF1 (chloroplast) [Vitis vinifera subsp.
caucasica]
Length = 1893
Score = 71.6 bits (174), Expect = 1e-10
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 9/78 (11%)
Frame = +3
Query: 90 KKMKDLVNRTKTIKNKIEKISKDNRKR------NISP---SYGTKKFESTKNIDQILKRR 242
KK+KDL +RT TI+ KIEKI KD +K NISP SY K+ ES K+I QILKRR
Sbjct: 1059 KKVKDLTDRTSTIRKKIEKIIKDKKKLFLTPEINISPNKASYNAKRLESQKSIWQILKRR 1118
Query: 243 NTRLICQSNSIFKFFRER 296
N+RLI + + KFF ER
Sbjct: 1119 NSRLIRKLHYFIKFFIER 1136
>ref|YP_567136.1| hypothetical chloroplast RF1 [Vitis vinifera]
gi|118577986|sp|Q0ZIW0.1|YCF1_VITVI RecName:
Full=Putative membrane protein ycf1; Short=RF1
gi|91701709|gb|ABE47593.1| hypothetical chloroplast RF1
[Vitis vinifera]
Length = 1893
Score = 71.6 bits (174), Expect = 1e-10
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 9/78 (11%)
Frame = +3
Query: 90 KKMKDLVNRTKTIKNKIEKISKDNRKR------NISP---SYGTKKFESTKNIDQILKRR 242
KK+KDL +RT TI+ KIEKI KD +K NISP SY K+ ES K+I QILKRR
Sbjct: 1059 KKVKDLTDRTSTIRKKIEKIIKDKKKLFLTPEINISPNKASYNAKRLESQKSIWQILKRR 1118
Query: 243 NTRLICQSNSIFKFFRER 296
N+RLI + + KFF ER
Sbjct: 1119 NSRLIRKLHYFIKFFIER 1136
>gb|AFI72608.1| Ycf1, partial [Callicarpa japonica]
Length = 1523
Score = 71.2 bits (173), Expect = 1e-10
Identities = 41/77 (53%), Positives = 51/77 (66%), Gaps = 8/77 (10%)
Frame = +3
Query: 90 KKMKDLVNRTKTIKNKIEKISKDNRK-----RNISP---SYGTKKFESTKNIDQILKRRN 245
KKMKDL +RT TI+N+IE+I+K+ +K N+SP SY K+FE QILKRRN
Sbjct: 733 KKMKDLTDRTSTIRNQIERITKEKKKVTPRINNLSPNKTSYSAKRFEKW----QILKRRN 788
Query: 246 TRLICQSNSIFKFFRER 296
RLICQ FKFF E+
Sbjct: 789 ARLICQLPPFFKFFIEK 805
>gb|ADX62194.1| Ycf1, partial (chloroplast) [Horminum pyrenaicum]
Length = 1519
Score = 70.9 bits (172), Expect = 2e-10
Identities = 42/77 (54%), Positives = 51/77 (66%), Gaps = 8/77 (10%)
Frame = +3
Query: 90 KKMKDLVNRTKTIKNKIEKISKDNRK-----RNISP---SYGTKKFESTKNIDQILKRRN 245
KK KDL +RT TI+N+IEKISKD +K +N+SP SY KK+E QILKRRN
Sbjct: 724 KKTKDLTDRTSTIRNQIEKISKDKKKVTPRIKNLSPKKTSYNAKKWEKW----QILKRRN 779
Query: 246 TRLICQSNSIFKFFRER 296
RLIC+ S FK F E+
Sbjct: 780 ARLICKFPSFFKIFIEK 796
>ref|YP_004072518.1| hypothetical protein ColaC_p079 [Corynocarpus laevigata]
gi|309252946|gb|ADO60366.1| hypothetical protein
[Corynocarpus laevigata]
Length = 1852
Score = 70.9 bits (172), Expect = 2e-10
Identities = 41/78 (52%), Positives = 49/78 (62%), Gaps = 9/78 (11%)
Frame = +3
Query: 90 KKMKDLVNRTKTIKNKIEKISKDNRKRNISP---------SYGTKKFESTKNIDQILKRR 242
KKMKDL +RT TI KIEKI KD +K I+P SY K+ ES KNI QILK+R
Sbjct: 1065 KKMKDLTDRTNTIIKKIEKIRKDKKKEFITPEINFSPNKISYDDKRLESPKNIWQILKKR 1124
Query: 243 NTRLICQSNSIFKFFRER 296
N RLI +S+ FF E+
Sbjct: 1125 NVRLIRKSHHFLTFFVEK 1142
>ref|YP_002836148.1| hypothetical chloroplast RF1 [Megaleranthis saniculifolia]
gi|226933940|gb|ACO92073.1| hypothetical chloroplast RF1
[Megaleranthis saniculifolia]
Length = 1774
Score = 70.9 bits (172), Expect = 2e-10
Identities = 43/78 (55%), Positives = 51/78 (65%), Gaps = 9/78 (11%)
Frame = +3
Query: 90 KKMKDLVNRTKTIKNKIEKISKDNRKR------NISP---SYGTKKFESTKNIDQILKRR 242
KKMKDL +RT TI+NKIEKI+KD + NIS S+ K+ ESTKN QILKRR
Sbjct: 1033 KKMKDLADRTSTIRNKIEKITKDKKNIFKIPHINISTNETSFYDKRLESTKNFWQILKRR 1092
Query: 243 NTRLICQSNSIFKFFRER 296
N RLI + + KFF ER
Sbjct: 1093 NARLIRKCHYFLKFFIER 1110
>ref|YP_398931.1| hypothetical protein NitoCp101 [Nicotiana tomentosiformis]
gi|118574759|sp|Q33BW4.1|YCF1_NICTO RecName:
Full=Putative membrane protein ycf1
gi|80750995|dbj|BAE48071.1| hypothetical protein
[Nicotiana tomentosiformis]
Length = 1892
Score = 70.5 bits (171), Expect = 2e-10
Identities = 42/78 (53%), Positives = 53/78 (67%), Gaps = 10/78 (12%)
Frame = +3
Query: 93 KMKDLVNRTKTIKNKIEKISKDNRKR----NISPSYGT------KKFESTKNIDQILKRR 242
KMKDL +RT TIKN+IE+I+K+ +K +ISP+ KKFES KNI QILKRR
Sbjct: 1078 KMKDLTDRTSTIKNQIERITKEKKKVTPEIDISPNKSPNKTNNIKKFESPKNIFQILKRR 1137
Query: 243 NTRLICQSNSIFKFFRER 296
NTRLI + + KFF +R
Sbjct: 1138 NTRLIWKFHYFLKFFIQR 1155
>gb|ADX62269.1| Ycf1, partial (chloroplast) [Salvia axillaris]
Length = 1519
Score = 70.5 bits (171), Expect = 2e-10
Identities = 42/84 (50%), Positives = 54/84 (64%), Gaps = 8/84 (9%)
Frame = +3
Query: 90 KKMKDLVNRTKTIKNKIEKISKDNRK-----RNISP---SYGTKKFESTKNIDQILKRRN 245
KKMKDL +RT TI+N+IE+ISK+ +K RN SP SY K+FE QILKRRN
Sbjct: 731 KKMKDLTDRTSTIRNQIERISKEKKKVTPRIRNFSPNKTSYNAKRFEKR----QILKRRN 786
Query: 246 TRLICQSNSIFKFFRERPPRGYFS 317
RLIC+ S+ K F E+ + F+
Sbjct: 787 PRLICKLPSLLKIFIEKIYKDIFA 810
>gb|ADX62236.1| Ycf1, partial (chloroplast) [Mentha arvensis]
Length = 1531
Score = 70.5 bits (171), Expect = 2e-10
Identities = 41/77 (53%), Positives = 51/77 (66%), Gaps = 8/77 (10%)
Frame = +3
Query: 90 KKMKDLVNRTKTIKNKIEKISKDNRK-----RNISP---SYGTKKFESTKNIDQILKRRN 245
KKMKDL +RT TI+N+IE+ISK+ +K N+SP SY K+FE QILKRRN
Sbjct: 735 KKMKDLTDRTSTIRNQIERISKEKKKVTPRINNLSPNKTSYNAKRFEKW----QILKRRN 790
Query: 246 TRLICQSNSIFKFFRER 296
RLIC+ S FK F E+
Sbjct: 791 ARLICKLPSFFKIFIEK 807
>ref|YP_007375104.1| hypothetical chloroplast RF19 [Quercus rubra]
gi|290489076|gb|ADD30922.1| putative RF1 protein [Quercus
nigra] gi|441421983|gb|AGC31307.1| hypothetical
chloroplast RF19 [Quercus rubra]
Length = 1885
Score = 70.5 bits (171), Expect = 2e-10
Identities = 41/78 (52%), Positives = 50/78 (64%), Gaps = 9/78 (11%)
Frame = +3
Query: 90 KKMKDLVNRTKTIKNKIEKISKDNRKRNISP---------SYGTKKFESTKNIDQILKRR 242
KKMKDL+NRT TI NKI+ I KD R+R I+P SY K ES KNI QILKR+
Sbjct: 1064 KKMKDLMNRTNTIINKIKTIKKDKRRRFITPERNINPNKISYDEKGLESPKNIWQILKRK 1123
Query: 243 NTRLICQSNSIFKFFRER 296
N RL+ +S+ K F E+
Sbjct: 1124 NLRLLRKSHYFVKLFIEK 1141