BLASTX nr result

ID: Achyranthes23_contig00008467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00008467
         (4278 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002883251.1| hypothetical protein ARALYDRAFT_342203 [Arab...    75   3e-10
ref|XP_002862843.1| predicted protein [Arabidopsis lyrata subsp....    75   3e-10
ref|XP_002888282.1| predicted protein [Arabidopsis lyrata subsp....    68   3e-08
dbj|BAB09350.1| unnamed protein product [Arabidopsis thaliana]         64   8e-07

>ref|XP_002883251.1| hypothetical protein ARALYDRAFT_342203 [Arabidopsis lyrata subsp.
            lyrata] gi|297329091|gb|EFH59510.1| hypothetical protein
            ARALYDRAFT_342203 [Arabidopsis lyrata subsp. lyrata]
          Length = 518

 Score = 74.7 bits (182), Expect = 3e-10
 Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 7/218 (3%)
 Frame = -2

Query: 3890 VLPTRYYDPTATQLLGFREPLIELIDRIGFTGFVRKGPNQTSERLTLEFISTVDWVEEPK 3711
            V+PTRY D    + L   + +  L +++G + FV K  + T   LT +F++TV+ ++EP 
Sbjct: 48   VVPTRYTDEATLERLHLSQTVSTLFEKMGLSDFVNKR-HLTYTELTKDFLATVEVLQEPD 106

Query: 3710 ----RKDSLIKFRLMNEDCEIPLSRLNTIMGWDPNSPTEFEKGDTLNPNWRSMGTRDTRN 3543
                 K+  I F + NE+  +    L  I G       ++ K                  
Sbjct: 107  CRLTGKNGAIHFVVANENHIVTFDDLANIFGLQKGFEMKYSKVQ---------------- 150

Query: 3542 FNPNFLWATIAGTS-YNT-RVKASAIKHPAFRYLHRMILYACFGRTQLGQTSKKELVALW 3369
             +P   W  I GT  YN+ +VKA+ ++HPA RY HR++    F R        +E+  L+
Sbjct: 151  -DPQQYWDAIGGTGRYNSGKVKAAQLRHPAVRYAHRVLANTFFARQFTNNVRTEEMHLLY 209

Query: 3368 LGLEHNDHSTPPPLNYGEMWVSHWLNYRK-QKTSRTKL 3258
             GLE    +T   ++ G +   H  +Y++  K + TKL
Sbjct: 210  TGLE---GTTWRDVHMGSVLGHHLASYKQWAKEASTKL 244


>ref|XP_002862843.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297308590|gb|EFH39101.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score = 74.7 bits (182), Expect = 3e-10
 Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 7/218 (3%)
 Frame = -2

Query: 3890 VLPTRYYDPTATQLLGFREPLIELIDRIGFTGFVRKGPNQTSERLTLEFISTVDWVEEPK 3711
            V+PTRY D    + L   + +  L +++G + FV K  + T   LT +F++TV+ ++EP 
Sbjct: 48   VVPTRYTDEATLERLHLSQTVSTLFEKMGLSDFVNKR-HLTYTELTKDFLATVEVLQEPD 106

Query: 3710 ----RKDSLIKFRLMNEDCEIPLSRLNTIMGWDPNSPTEFEKGDTLNPNWRSMGTRDTRN 3543
                 K+  I F + NE+  +    L  I G       ++ K                  
Sbjct: 107  CRLTGKNGAIHFVVANENHIVTFDDLANIFGLQKGFEMKYSKVQ---------------- 150

Query: 3542 FNPNFLWATIAGTS-YNT-RVKASAIKHPAFRYLHRMILYACFGRTQLGQTSKKELVALW 3369
             +P   W  I GT  YN+ +VKA+ ++HPA RY HR++    F R        +E+  L+
Sbjct: 151  -DPQQYWDAIGGTGRYNSGKVKAAQLRHPAVRYAHRVLANTFFARQFTNNVRTEEMHLLY 209

Query: 3368 LGLEHNDHSTPPPLNYGEMWVSHWLNYRK-QKTSRTKL 3258
             GLE    +T   ++ G +   H  +Y++  K + TKL
Sbjct: 210  TGLE---GTTWRDVHMGSVLGHHLASYKQWAKEASTKL 244


>ref|XP_002888282.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297334123|gb|EFH64541.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 264

 Score = 68.2 bits (165), Expect = 3e-08
 Identities = 59/232 (25%), Positives = 104/232 (44%), Gaps = 17/232 (7%)
 Frame = -2

Query: 3890 VLPTRYYDPTATQLLGFREPLIELIDRIGFTGFVRKGPNQTSERLTLEFISTVDWVEEPK 3711
            V PTR+ D    + +G  E + +L+ RIG +  ++     T E  T +F+STV  VE  K
Sbjct: 42   VHPTRFVDRFFLRQMGLAEGVDDLLQRIGMS-CLKDMYYPTFEEETRDFLSTVK-VEYEK 99

Query: 3710 RKDS-----LIKFRLMNEDCEIPLSRLNTIMGWDPNSPTEFEKGDTLNPNWRSMGTRDTR 3546
             +D      L+ F++ N+   + +  +  + G+       F   DT +            
Sbjct: 100  PRDKVASQGLMTFKIRNKGYGLTIFDICEVYGFSKGEAVSF---DTFH------------ 144

Query: 3545 NFNPNFLWATIAGTSYNTR-VKASAIKHPAFRYLHRMILYACFGRTQLGQTSKKELVALW 3369
                N+LW  IA  +Y T   K + I++P  RY+ +++    F R   G  + KEL  L+
Sbjct: 145  --GANYLWNRIANGNYKTHGAKMTGIRNPVIRYVCKLLANTFFARKDAGAVTLKELCLLY 202

Query: 3368 LGLEH---------NDHSTPPPLNYGEMWVSHWLNYR--KQKTSRTKLIMGG 3246
             GL+H         +++     +NYG ++ ++ L ++     T    L +GG
Sbjct: 203  QGLKHLLIDMRGVLHEYEFGDEINYGSIFANNLLQFKTWANTTPNPDLYIGG 254


>dbj|BAB09350.1| unnamed protein product [Arabidopsis thaliana]
          Length = 472

 Score = 63.5 bits (153), Expect = 8e-07
 Identities = 52/243 (21%), Positives = 102/243 (41%), Gaps = 22/243 (9%)
 Frame = -2

Query: 3884 PTRYYDPTATQLLGFREPLIELIDRIGFTGFVRKGPNQTSERLTLEFISTVDWV----EE 3717
            PTR+ +    + +G  E + E   ++G   F        SE  T++F ST+++     + 
Sbjct: 47   PTRFANREILEKMGLLETIDEFFTKMGLGAFTSMDHPTFSEP-TVDFFSTMEYTFTNPKI 105

Query: 3716 PKRKDSLIKFRLMNEDCEIPLSRLNTIMGWDPNSPTEFEKGDTLNPNWRSMGTRDTRNFN 3537
            P  K+ +I F++  +   I +  L    G++  S   F K   ++               
Sbjct: 106  PLAKEGIINFKVKTKAFSISIPDLCEAYGFENKSEMSFPKFKGIH--------------- 150

Query: 3536 PNFLWATIAGTSYNTRVKASAIKHPAFRYLHRMILYACFGRTQLGQTSKKELVALWLG-- 3363
              F W  +A   ++      +++HP  RY  +++ +A FGR +   T+  E+  L+ G  
Sbjct: 151  --FFWGELASGKFSCNASIKSVRHPVIRYALKLLAHALFGRGETSSTTVSEMCFLFQGVK 208

Query: 3362 --------------LEHNDHSTPPPLNYGEMWVSHWLNYRKQ--KTSRTKLIMGGGVTRL 3231
                          L H+D      +NYG ++ S+  +Y+ +  K     + +GG +T L
Sbjct: 209  ELLVEDADENGDGRLVHDDLGN--DVNYGCIFASYLEDYKNRLIKGKTKSIYIGGTLTPL 266

Query: 3230 AIE 3222
             ++
Sbjct: 267  FVK 269


Top