BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00006220
         (746 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY08505.1| Chloroplast RNA-binding protein 33 [Theobroma cacao]   196   9e-48
gb|EXC12983.1| 33 kDa ribonucleoprotein [Morus notabilis]             190   5e-46
ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   189   1e-45
emb|CBI39142.3| unnamed protein product [Vitis vinifera]              188   2e-45
ref|XP_002264127.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   188   2e-45
ref|XP_006430047.1| hypothetical protein CICLE_v10012204mg [Citr...   187   4e-45
ref|XP_006292182.1| hypothetical protein CARUB_v10018388mg [Caps...   186   5e-45
ref|XP_006481614.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   184   2e-44
ref|XP_006403809.1| hypothetical protein EUTSA_v10010548mg [Eutr...   184   2e-44
ref|XP_003521499.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   184   2e-44
emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana s...   184   2e-44
ref|XP_002322776.1| 33 kDa ribonucleoprotein [Populus trichocarp...   184   3e-44
gb|ABK95582.1| unknown [Populus trichocarpa]                          184   3e-44
emb|CAN61277.1| hypothetical protein VITISV_002607 [Vitis vinifera]   184   4e-44
ref|XP_002309257.2| hypothetical protein POPTR_0006s21650g [Popu...   182   8e-44
ref|XP_004494258.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   182   1e-43
sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleoprotein, c...   182   1e-43
ref|NP_190806.1| chloroplast RNA-binding protein 33 [Arabidopsis...   182   1e-43
dbj|BAA06523.1| RNA-binding protein cp33 [Arabidopsis thaliana]       182   1e-43
gb|AAL32533.1| ubiquitin / ribosomal protein CEP52 [Arabidopsis ...   181   2e-43

>gb|EOY08505.1| Chloroplast RNA-binding protein 33 [Theobroma cacao]
          Length = 340

 Score =  196 bits (497), Expect = 9e-48
 Identities = 98/145 (67%), Positives = 118/145 (81%), Gaps = 8/145 (5%)
 Frame = +1

Query: 1   QVGGRTVRVNFPEVPRGGERKVMGPKIRSSNLSFVDTPHKIYAGNLGWGVTTQGLRDAFA 180
           QVGGRTV+VNFPEVPRGGER+VMGPKIR    SF+D+P+KIYAGNLGWGVT+QGLRDAFA
Sbjct: 195 QVGGRTVKVNFPEVPRGGEREVMGPKIRRGYKSFLDSPYKIYAGNLGWGVTSQGLRDAFA 254

Query: 181 NHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALSTMNGVELEGRPLRLNMAAERS- 357
           +  G LSAKVIYER++GRSRGFGF++F SA+  E+AL+ MNGVE+EGRPLRLNMAA+R+ 
Sbjct: 255 SQPGLLSAKVIYERDTGRSRGFGFVSFESAETVEAALNAMNGVEVEGRPLRLNMAADRAP 314

Query: 358 -------RSNTEAYAEQNA*LSSVS 411
                    NT+   E +  LSSV+
Sbjct: 315 GTPSPEMERNTKESLESSELLSSVT 339



 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 24/74 (32%), Positives = 46/74 (62%)
 Frame = +1

Query: 118 KIYAGNLGWGVTTQGLRDAFANHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALST 297
           ++Y GNL + +T+  L + F       + +++Y+R + RSRGF F+T +S D A+ A+  
Sbjct: 131 RLYVGNLPYSMTSSELSEIFNEAGRVANVEIVYDRVTDRSRGFAFVTMASVDDAKEAIRL 190

Query: 298 MNGVELEGRPLRLN 339
            +G ++ GR +++N
Sbjct: 191 FDGSQVGGRTVKVN 204


>gb|EXC12983.1| 33 kDa ribonucleoprotein [Morus notabilis]
          Length = 325

 Score =  190 bits (482), Expect = 5e-46
 Identities = 87/119 (73%), Positives = 108/119 (90%)
 Frame = +1

Query: 1   QVGGRTVRVNFPEVPRGGERKVMGPKIRSSNLSFVDTPHKIYAGNLGWGVTTQGLRDAFA 180
           QVGGRTV+VNFP+VPRGGER+V+GPKIR+ N  +VD+PHKIYAGNLGWG+T+Q LRDAFA
Sbjct: 180 QVGGRTVKVNFPQVPRGGEREVLGPKIRNMNKGYVDSPHKIYAGNLGWGLTSQDLRDAFA 239

Query: 181 NHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALSTMNGVELEGRPLRLNMAAERS 357
           +  G LSAKVIYER++GRSRGFGF++F +A+A++SAL  MNGVE++GRPLRLNMA ER+
Sbjct: 240 DQPGVLSAKVIYERDTGRSRGFGFVSFETAEASQSALDAMNGVEVQGRPLRLNMATERA 298



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 26/74 (35%), Positives = 44/74 (59%)
 Frame = +1

Query: 118 KIYAGNLGWGVTTQGLRDAFANHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALST 297
           ++Y GNL + + +  L   F       S +VIY+R + RSRGFGF+T  S + A+ A+  
Sbjct: 116 RLYVGNLPYSMDSSQLAQVFGEAGTVFSVEVIYDRVTDRSRGFGFVTMGSVEEAQEAIRL 175

Query: 298 MNGVELEGRPLRLN 339
            +G ++ GR +++N
Sbjct: 176 FDGSQVGGRTVKVN 189


>ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus] gi|449528229|ref|XP_004171108.1| PREDICTED: 33
           kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 323

 Score =  189 bits (479), Expect = 1e-45
 Identities = 89/126 (70%), Positives = 109/126 (86%)
 Frame = +1

Query: 1   QVGGRTVRVNFPEVPRGGERKVMGPKIRSSNLSFVDTPHKIYAGNLGWGVTTQGLRDAFA 180
           Q+GGRTVRVNFPEVPRGGE++VMGP+IRSS   FVD+PHKIYAGNLGWG+T+Q LRDAF 
Sbjct: 180 QIGGRTVRVNFPEVPRGGEKEVMGPRIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFE 239

Query: 181 NHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALSTMNGVELEGRPLRLNMAAERSR 360
           N  G LSAK+IY+R SG+SRGFGF++F +A+ AESAL +MNGVE+EGRPLRLN+AA +S 
Sbjct: 240 NQPGILSAKIIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAGQSP 299

Query: 361 SNTEAY 378
            +  A+
Sbjct: 300 ISPAAF 305



 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 27/74 (36%), Positives = 48/74 (64%)
 Frame = +1

Query: 118 KIYAGNLGWGVTTQGLRDAFANHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALST 297
           K+Y GNL + +T+  L + FA     +S +VIY++ + RSRGF F+T ++ + A+ A+  
Sbjct: 116 KLYIGNLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRM 175

Query: 298 MNGVELEGRPLRLN 339
            +G ++ GR +R+N
Sbjct: 176 FDGSQIGGRTVRVN 189


>emb|CBI39142.3| unnamed protein product [Vitis vinifera]
          Length = 198

 Score =  188 bits (477), Expect = 2e-45
 Identities = 91/119 (76%), Positives = 106/119 (89%)
 Frame = +1

Query: 1   QVGGRTVRVNFPEVPRGGERKVMGPKIRSSNLSFVDTPHKIYAGNLGWGVTTQGLRDAFA 180
           QVGGRTV+VNFPEVPRGGER VMGPKIRSS   FVD+P+KIYAGNL W +T++GLRDAFA
Sbjct: 55  QVGGRTVKVNFPEVPRGGERAVMGPKIRSSYRGFVDSPYKIYAGNLSWRLTSEGLRDAFA 114

Query: 181 NHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALSTMNGVELEGRPLRLNMAAERS 357
           +H G L AKVIYERESGRSRGFGF++F+SA+ AESAL+ MN VE+EGRPLRLN+AA R+
Sbjct: 115 DHPGLLGAKVIYERESGRSRGFGFLSFASAENAESALNAMNEVEVEGRPLRLNLAAVRA 173


>ref|XP_002264127.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Vitis
           vinifera]
          Length = 311

 Score =  188 bits (477), Expect = 2e-45
 Identities = 91/119 (76%), Positives = 106/119 (89%)
 Frame = +1

Query: 1   QVGGRTVRVNFPEVPRGGERKVMGPKIRSSNLSFVDTPHKIYAGNLGWGVTTQGLRDAFA 180
           QVGGRTV+VNFPEVPRGGER VMGPKIRSS   FVD+P+KIYAGNL W +T++GLRDAFA
Sbjct: 168 QVGGRTVKVNFPEVPRGGERAVMGPKIRSSYRGFVDSPYKIYAGNLSWRLTSEGLRDAFA 227

Query: 181 NHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALSTMNGVELEGRPLRLNMAAERS 357
           +H G L AKVIYERESGRSRGFGF++F+SA+ AESAL+ MN VE+EGRPLRLN+AA R+
Sbjct: 228 DHPGLLGAKVIYERESGRSRGFGFLSFASAENAESALNAMNEVEVEGRPLRLNLAAVRA 286



 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 25/74 (33%), Positives = 45/74 (60%)
 Frame = +1

Query: 118 KIYAGNLGWGVTTQGLRDAFANHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALST 297
           ++Y GNL + +T+  L D F      +S +++Y+R + RSRGF F+T  S   A+ A+  
Sbjct: 104 RLYVGNLPYSMTSSQLGDVFNEAGSVISVEIVYDRVTDRSRGFAFVTMGSVQEAKEAIRM 163

Query: 298 MNGVELEGRPLRLN 339
            +G ++ GR +++N
Sbjct: 164 FDGSQVGGRTVKVN 177


>ref|XP_006430047.1| hypothetical protein CICLE_v10012204mg [Citrus clementina]
           gi|557532104|gb|ESR43287.1| hypothetical protein
           CICLE_v10012204mg [Citrus clementina]
          Length = 322

 Score =  187 bits (474), Expect = 4e-45
 Identities = 93/145 (64%), Positives = 113/145 (77%), Gaps = 8/145 (5%)
 Frame = +1

Query: 1   QVGGRTVRVNFPEVPRGGERKVMGPKIRSSNLSFVDTPHKIYAGNLGWGVTTQGLRDAFA 180
           Q+GGRTV+VNFPEVPRGGER  MGPK+++S   FVD+PHKIYAGNLGWG+T+QGLRDAF 
Sbjct: 177 QIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQ 236

Query: 181 NHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALSTMNGVELEGRPLRLNMAAERS- 357
              G LSAKVI+ER +GRSRGFGF+TF +A+  +SAL  MNGVE+EGRPLRLNMA ER+ 
Sbjct: 237 GQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAP 296

Query: 358 -------RSNTEAYAEQNA*LSSVS 411
                   +NTE   + +  LSS+S
Sbjct: 297 PVSLAAKETNTENSIDGSELLSSIS 321



 Score = 66.6 bits (161), Expect = 8e-09
 Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 7/161 (4%)
 Frame = +1

Query: 73  PKIRSSNLSFVDTPHKIYAGNLGWGVTTQGLRDAFANHEGFLSAKVIYERESGRSRGFGF 252
           PK+ +S     D   ++Y GNL + +T+  L + FA      SA+++Y+R + RSRGFGF
Sbjct: 103 PKVAAS-----DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGF 157

Query: 253 ITFSSADAAESALSTMNGVELEGRPLRLNM-----AAERSRSNTEAYAEQNA*LSSVSHL 417
           +T  S + A+ A+   +G ++ GR +++N        ER+    +        + S   +
Sbjct: 158 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKI 217

Query: 418 *GNSFY*FGTALRGNTAAFNFDP--ITQVAVFSNSRGRFRG 534
              +   +G   +G   AF   P  ++   +F    GR RG
Sbjct: 218 YAGNLG-WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRG 257


>ref|XP_006292182.1| hypothetical protein CARUB_v10018388mg [Capsella rubella]
           gi|482560889|gb|EOA25080.1| hypothetical protein
           CARUB_v10018388mg [Capsella rubella]
          Length = 342

 Score =  186 bits (473), Expect = 5e-45
 Identities = 88/120 (73%), Positives = 105/120 (87%)
 Frame = +1

Query: 1   QVGGRTVRVNFPEVPRGGERKVMGPKIRSSNLSFVDTPHKIYAGNLGWGVTTQGLRDAFA 180
           Q+GGRTV+VNFPEVPRGGER+VM  KIR +N S+VD+PHKIYAGNLGW +T+QGL+DAFA
Sbjct: 185 QIGGRTVKVNFPEVPRGGEREVMRTKIRDNNRSYVDSPHKIYAGNLGWNLTSQGLKDAFA 244

Query: 181 NHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALSTMNGVELEGRPLRLNMAAERSR 360
           +  G L AKVIYER +GRSRGFGFI+F SAD  +SALSTMNGVE+EGR LRLN+A+ER +
Sbjct: 245 DQSGVLGAKVIYERNTGRSRGFGFISFESADDVQSALSTMNGVEVEGRALRLNLASEREK 304



 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 23/74 (31%), Positives = 44/74 (59%)
 Frame = +1

Query: 118 KIYAGNLGWGVTTQGLRDAFANHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALST 297
           ++Y GNL + +T+  L   F      +  +++Y++ + RSRGFGF+T  S + A+ A+  
Sbjct: 121 RLYVGNLPYTITSSELSQIFGEAGKIVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAIQM 180

Query: 298 MNGVELEGRPLRLN 339
            N  ++ GR +++N
Sbjct: 181 FNSSQIGGRTVKVN 194


>ref|XP_006481614.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Citrus
           sinensis]
          Length = 323

 Score =  184 bits (468), Expect = 2e-44
 Identities = 92/145 (63%), Positives = 112/145 (77%), Gaps = 8/145 (5%)
 Frame = +1

Query: 1   QVGGRTVRVNFPEVPRGGERKVMGPKIRSSNLSFVDTPHKIYAGNLGWGVTTQGLRDAFA 180
           Q+GGRTV+VNFPEVPRGGER  MGPK+++S   FVD+PHKIYAGNLGWG+T+QGLRDAF 
Sbjct: 178 QIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKIYAGNLGWGLTSQGLRDAFQ 237

Query: 181 NHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALSTMNGVELEGRPLRLNMAAERS- 357
              G LSAKVI+ER +GRSRGFGF+TF +A+  +SAL  MNGVE+EGRPLRLNMA ER+ 
Sbjct: 238 GQPGLLSAKVIFERYTGRSRGFGFVTFETAEDLQSALDAMNGVEVEGRPLRLNMANERAP 297

Query: 358 -------RSNTEAYAEQNA*LSSVS 411
                   + TE   + +  LSS+S
Sbjct: 298 PVLPAAKETKTENSIDGSELLSSIS 322



 Score = 66.6 bits (161), Expect = 8e-09
 Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 7/161 (4%)
 Frame = +1

Query: 73  PKIRSSNLSFVDTPHKIYAGNLGWGVTTQGLRDAFANHEGFLSAKVIYERESGRSRGFGF 252
           PK+ +S     D   ++Y GNL + +T+  L + FA      SA+++Y+R + RSRGFGF
Sbjct: 104 PKVAAS-----DEAARLYVGNLPYSMTSSSLAEVFAEAGTVASAEIVYDRVTDRSRGFGF 158

Query: 253 ITFSSADAAESALSTMNGVELEGRPLRLNM-----AAERSRSNTEAYAEQNA*LSSVSHL 417
           +T  S + A+ A+   +G ++ GR +++N        ER+    +        + S   +
Sbjct: 159 VTMGSVEEAKEAIRLFDGSQIGGRTVKVNFPEVPRGGERAAMGPKLQNSYQGFVDSPHKI 218

Query: 418 *GNSFY*FGTALRGNTAAFNFDP--ITQVAVFSNSRGRFRG 534
              +   +G   +G   AF   P  ++   +F    GR RG
Sbjct: 219 YAGNLG-WGLTSQGLRDAFQGQPGLLSAKVIFERYTGRSRG 258


>ref|XP_006403809.1| hypothetical protein EUTSA_v10010548mg [Eutrema salsugineum]
           gi|557104928|gb|ESQ45262.1| hypothetical protein
           EUTSA_v10010548mg [Eutrema salsugineum]
          Length = 322

 Score =  184 bits (468), Expect = 2e-44
 Identities = 88/128 (68%), Positives = 107/128 (83%)
 Frame = +1

Query: 1   QVGGRTVRVNFPEVPRGGERKVMGPKIRSSNLSFVDTPHKIYAGNLGWGVTTQGLRDAFA 180
           Q+GGRTV+VNFPEVPRGGER+VM  KIR +N S+VD+PHKIYAGNLGW +T+QGL+DAFA
Sbjct: 176 QIGGRTVKVNFPEVPRGGEREVMRTKIRDTNRSYVDSPHKIYAGNLGWSLTSQGLKDAFA 235

Query: 181 NHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALSTMNGVELEGRPLRLNMAAERSR 360
           +  G L AKVIYER SGRSRGFGFI+F SA   +SALS MNGVE+EGR LRLN+A+ER+ 
Sbjct: 236 DQPGVLGAKVIYERNSGRSRGFGFISFESAQDVQSALSAMNGVEVEGRALRLNLASERAT 295

Query: 361 SNTEAYAE 384
            +  + A+
Sbjct: 296 ESVPSVAQ 303



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 23/74 (31%), Positives = 45/74 (60%)
 Frame = +1

Query: 118 KIYAGNLGWGVTTQGLRDAFANHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALST 297
           ++Y GNL + +T+  L + F      +  +++Y++ + RSRGFGF+T  S + A+ A+  
Sbjct: 112 RLYVGNLPYTITSSELSELFGEAGNVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAIQM 171

Query: 298 MNGVELEGRPLRLN 339
            N  ++ GR +++N
Sbjct: 172 FNSSQIGGRTVKVN 185


>ref|XP_003521499.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like isoform X1
           [Glycine max]
          Length = 314

 Score =  184 bits (468), Expect = 2e-44
 Identities = 87/122 (71%), Positives = 107/122 (87%)
 Frame = +1

Query: 1   QVGGRTVRVNFPEVPRGGERKVMGPKIRSSNLSFVDTPHKIYAGNLGWGVTTQGLRDAFA 180
           QVGGRTV+VNFPEVP+GGER VMG KIR+S   FVD+PHKIYAGNLGWG+T+QGLR+AFA
Sbjct: 170 QVGGRTVKVNFPEVPKGGERLVMGSKIRNSYRGFVDSPHKIYAGNLGWGLTSQGLREAFA 229

Query: 181 NHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALSTMNGVELEGRPLRLNMAAERSR 360
              G LSAKVIYER+SGRSRGFGF++F +A++A++AL  MNGVE++GRPLRLN+A  R+ 
Sbjct: 230 EQPGVLSAKVIYERDSGRSRGFGFVSFETAESAQAALDIMNGVEVQGRPLRLNLAEARAP 289

Query: 361 SN 366
           S+
Sbjct: 290 SS 291


>emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana sylvestris]
          Length = 319

 Score =  184 bits (468), Expect = 2e-44
 Identities = 94/145 (64%), Positives = 114/145 (78%), Gaps = 8/145 (5%)
 Frame = +1

Query: 1   QVGGRTVRVNFPEVPRGGERKVMGPKIRSSNLSFVDTPHKIYAGNLGWGVTTQGLRDAFA 180
           QVGGRTV+VNFPEVPRGGER+VM  KIRS+   FVD+PHK+Y  NL W +T+QGLRDAFA
Sbjct: 174 QVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGLRDAFA 233

Query: 181 NHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALSTMNGVELEGRPLRLNMAAERS- 357
           +  GF+SAKVIY+R SGRSRGFGFITFSSA+A +SAL TMN VELEGRPLRLN+A +++ 
Sbjct: 234 DQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMKSALDTMNEVELEGRPLRLNVAGQKAP 293

Query: 358 -------RSNTEAYAEQNA*LSSVS 411
                   ++ E  +E N  LSS+S
Sbjct: 294 LSSPSVVETSPENDSENNELLSSLS 318



 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 24/74 (32%), Positives = 46/74 (62%)
 Frame = +1

Query: 118 KIYAGNLGWGVTTQGLRDAFANHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALST 297
           ++Y GNL + +T+  L + FA      + +++Y+R + RSRGF F+T  S + A+ A+  
Sbjct: 110 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 169

Query: 298 MNGVELEGRPLRLN 339
            +G ++ GR +++N
Sbjct: 170 FDGSQVGGRTVKVN 183


>ref|XP_002322776.1| 33 kDa ribonucleoprotein [Populus trichocarpa]
           gi|222867406|gb|EEF04537.1| 33 kDa ribonucleoprotein
           [Populus trichocarpa]
          Length = 324

 Score =  184 bits (467), Expect = 3e-44
 Identities = 92/142 (64%), Positives = 112/142 (78%), Gaps = 6/142 (4%)
 Frame = +1

Query: 1   QVGGRTVRVNFPEVPRGGERKVMGPKIRSSNLSFVDTPHKIYAGNLGWGVTTQGLRDAFA 180
           QVGGRT+RVNFPEVPRGGER+VM P+IRS    F+D+ HKIYAGNLGW +T++GL DAFA
Sbjct: 181 QVGGRTLRVNFPEVPRGGEREVMEPRIRSGYKGFIDSEHKIYAGNLGWRLTSEGLGDAFA 240

Query: 181 NHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALSTMNGVELEGRPLRLNMAAERS- 357
           N  G LSAKVIYER++GRSRGFGF++F SA+ AE+AL  MNG E++GRPLRLN+A ERS 
Sbjct: 241 NQPGLLSAKVIYERDTGRSRGFGFVSFDSAENAEAALEAMNGEEVDGRPLRLNLAGERSY 300

Query: 358 -----RSNTEAYAEQNA*LSSV 408
                 +NTE   E +  LSS+
Sbjct: 301 PPPAKENNTEDNLESSELLSSI 322



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 30/74 (40%), Positives = 45/74 (60%)
 Frame = +1

Query: 118 KIYAGNLGWGVTTQGLRDAFANHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALST 297
           K+Y GNL + +T+  L + F        A+VI +R + RSRGFGF+T  S + A+ A+  
Sbjct: 117 KLYVGNLPYSMTSSELAEVFEEAGRVFGAEVICDRVTDRSRGFGFVTMESVEEAKEAIRM 176

Query: 298 MNGVELEGRPLRLN 339
            NG ++ GR LR+N
Sbjct: 177 FNGSQVGGRTLRVN 190


>gb|ABK95582.1| unknown [Populus trichocarpa]
          Length = 198

 Score =  184 bits (467), Expect = 3e-44
 Identities = 92/142 (64%), Positives = 112/142 (78%), Gaps = 6/142 (4%)
 Frame = +1

Query: 1   QVGGRTVRVNFPEVPRGGERKVMGPKIRSSNLSFVDTPHKIYAGNLGWGVTTQGLRDAFA 180
           QVGGRT+RVNFPEVPRGGER+VM P+IRS    F+D+ HKIYAGNLGW +T++GL DAFA
Sbjct: 55  QVGGRTLRVNFPEVPRGGEREVMEPRIRSGYKGFIDSEHKIYAGNLGWRLTSEGLGDAFA 114

Query: 181 NHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALSTMNGVELEGRPLRLNMAAERS- 357
           N  G LSAKVIYER++GRSRGFGF++F SA+ AE+AL  MNG E++GRPLRLN+A ERS 
Sbjct: 115 NQPGLLSAKVIYERDTGRSRGFGFVSFDSAENAEAALEAMNGEEVDGRPLRLNLAGERSY 174

Query: 358 -----RSNTEAYAEQNA*LSSV 408
                 +NTE   E +  LSS+
Sbjct: 175 PPPAKENNTEDNLESSELLSSI 196


>emb|CAN61277.1| hypothetical protein VITISV_002607 [Vitis vinifera]
          Length = 454

 Score =  184 bits (466), Expect = 4e-44
 Identities = 89/119 (74%), Positives = 105/119 (88%)
 Frame = +1

Query: 1   QVGGRTVRVNFPEVPRGGERKVMGPKIRSSNLSFVDTPHKIYAGNLGWGVTTQGLRDAFA 180
           QVGGRTV+VNFPEVPRGGER VMGPKIRSS   FVD+P+KIYAGNL W +T++GLRDAFA
Sbjct: 311 QVGGRTVKVNFPEVPRGGERAVMGPKIRSSYRGFVDSPYKIYAGNLSWRLTSEGLRDAFA 370

Query: 181 NHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALSTMNGVELEGRPLRLNMAAERS 357
           +  G L AKVIYERESGRSRGFGF++F+SA+ AESAL+ M+ VE+EGRPLRLN+AA R+
Sbjct: 371 DXPGLLGAKVIYERESGRSRGFGFLSFASAENAESALNAMBEVEVEGRPLRLNLAAVRA 429



 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 24/74 (32%), Positives = 44/74 (59%)
 Frame = +1

Query: 118 KIYAGNLGWGVTTQGLRDAFANHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALST 297
           ++Y GNL + +T+  L   F      +S +++Y+R + RSRGF F+T  S   A+ A+  
Sbjct: 247 RLYVGNLPYSMTSSQLGXVFNEAGSVISVEIVYDRVTDRSRGFAFVTMGSVQEAKEAIRM 306

Query: 298 MNGVELEGRPLRLN 339
            +G ++ GR +++N
Sbjct: 307 FDGSQVGGRTVKVN 320


>ref|XP_002309257.2| hypothetical protein POPTR_0006s21650g [Populus trichocarpa]
           gi|550336813|gb|EEE92780.2| hypothetical protein
           POPTR_0006s21650g [Populus trichocarpa]
          Length = 326

 Score =  182 bits (463), Expect = 8e-44
 Identities = 92/141 (65%), Positives = 110/141 (78%), Gaps = 6/141 (4%)
 Frame = +1

Query: 1   QVGGRTVRVNFPEVPRGGERKVMGPKIRSSNLSFVDTPHKIYAGNLGWGVTTQGLRDAFA 180
           Q GGR+VRVNFPEVPRGGER+VMGP+I+S    F+D+ HKIYAGNLGW +T++GLRDAFA
Sbjct: 183 QFGGRSVRVNFPEVPRGGEREVMGPRIQSGYKGFIDSEHKIYAGNLGWRLTSEGLRDAFA 242

Query: 181 NHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALSTMNGVELEGRPLRLNMAAERS- 357
           N  G LSAKVIYER+S RSRGFGF++F SA+ AE+AL  MNG E+EGRP+RLN+A ERS 
Sbjct: 243 NQPGVLSAKVIYERDSRRSRGFGFVSFESAENAEAALEAMNGEEVEGRPMRLNLAGERSP 302

Query: 358 -----RSNTEAYAEQNA*LSS 405
                 +NTE   E    LSS
Sbjct: 303 PPSAKENNTENNLESGELLSS 323



 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 31/74 (41%), Positives = 46/74 (62%)
 Frame = +1

Query: 118 KIYAGNLGWGVTTQGLRDAFANHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALST 297
           K+Y GNL + +T+  L + F       SA+VIY+R + RSRGFGF+T  S + A+ A+  
Sbjct: 119 KLYVGNLPYSMTSSELTEVFEEAGRVFSAEVIYDRVTDRSRGFGFVTMGSVEEAKKAIQM 178

Query: 298 MNGVELEGRPLRLN 339
            NG +  GR +R+N
Sbjct: 179 FNGTQFGGRSVRVN 192


>ref|XP_004494258.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cicer
           arietinum]
          Length = 318

 Score =  182 bits (462), Expect = 1e-43
 Identities = 84/130 (64%), Positives = 107/130 (82%)
 Frame = +1

Query: 1   QVGGRTVRVNFPEVPRGGERKVMGPKIRSSNLSFVDTPHKIYAGNLGWGVTTQGLRDAFA 180
           Q+GGR+ +VNFPEVP+GGER VMG K+RS+   FVD+PHKIYAGNLGWG+ +Q LRDAFA
Sbjct: 173 QIGGRSAKVNFPEVPKGGERLVMGKKVRSAYKGFVDSPHKIYAGNLGWGLNSQELRDAFA 232

Query: 181 NHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALSTMNGVELEGRPLRLNMAAERSR 360
              G L AKVIYER++GRSRGFGF+TF +A+  E+AL+ MNGVE++GRPLRLN+A+ER+ 
Sbjct: 233 EQPGLLGAKVIYERDNGRSRGFGFVTFETAENLEAALNAMNGVEVQGRPLRLNLASERTT 292

Query: 361 SNTEAYAEQN 390
           S+     E+N
Sbjct: 293 SSPPPVVEEN 302



 Score = 60.5 bits (145), Expect = 6e-07
 Identities = 26/78 (33%), Positives = 47/78 (60%)
 Frame = +1

Query: 106 DTPHKIYAGNLGWGVTTQGLRDAFANHEGFLSAKVIYERESGRSRGFGFITFSSADAAES 285
           D   ++Y GNL + +T+  L + FA     +S +++Y+R + RSRGF F+T  S + A+ 
Sbjct: 105 DDAGRLYVGNLPFSITSSQLAEIFAEAGTVVSVEIVYDRVTDRSRGFAFVTMKSVEEAKE 164

Query: 286 ALSTMNGVELEGRPLRLN 339
           A+   +G ++ GR  ++N
Sbjct: 165 AIRMFDGSQIGGRSAKVN 182


>sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleoprotein, chloroplastic; Flags:
           Precursor gi|100390|pir||S12111 ribonucleoprotein, 33K,
           precursor - common tobacco gi|20005|emb|CAA37879.1|
           unnamed protein product [Nicotiana tabacum]
          Length = 324

 Score =  182 bits (461), Expect = 1e-43
 Identities = 87/119 (73%), Positives = 102/119 (85%)
 Frame = +1

Query: 1   QVGGRTVRVNFPEVPRGGERKVMGPKIRSSNLSFVDTPHKIYAGNLGWGVTTQGLRDAFA 180
           QVGGRTV+VNFPEVPRGGER+VM  KIRS+   FVD+PHK+Y  NL W +T+QGLRDAFA
Sbjct: 179 QVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGLRDAFA 238

Query: 181 NHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALSTMNGVELEGRPLRLNMAAERS 357
           +  GF+SAKVIY+R SGRSRGFGFITFSSA+A  SAL TMN VELEGRPLRLN+A +++
Sbjct: 239 DQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEGRPLRLNVAGQKA 297



 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 24/74 (32%), Positives = 46/74 (62%)
 Frame = +1

Query: 118 KIYAGNLGWGVTTQGLRDAFANHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALST 297
           ++Y GNL + +T+  L + FA      + +++Y+R + RSRGF F+T  S + A+ A+  
Sbjct: 115 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 174

Query: 298 MNGVELEGRPLRLN 339
            +G ++ GR +++N
Sbjct: 175 FDGSQVGGRTVKVN 188


>ref|NP_190806.1| chloroplast RNA-binding protein 33 [Arabidopsis thaliana]
           gi|681910|dbj|BAA06522.1| RNA-binding protein cp33
           [Arabidopsis thaliana] gi|4886289|emb|CAB43448.1|
           RNA-binding protein cp33 precursor [Arabidopsis
           thaliana] gi|14517544|gb|AAK62662.1| AT3g52380/F22O6_240
           [Arabidopsis thaliana] gi|18700226|gb|AAL77723.1|
           AT3g52380/F22O6_240 [Arabidopsis thaliana]
           gi|21553418|gb|AAM62511.1| RNA-binding protein cp33
           [Arabidopsis thaliana] gi|332645419|gb|AEE78940.1|
           chloroplast RNA-binding protein 33 [Arabidopsis
           thaliana]
          Length = 329

 Score =  182 bits (461), Expect = 1e-43
 Identities = 91/148 (61%), Positives = 112/148 (75%), Gaps = 11/148 (7%)
 Frame = +1

Query: 1   QVGGRTVRVNFPEVPRGGERKVMGPKIRSSNLSFVDTPHKIYAGNLGWGVTTQGLRDAFA 180
           Q+GGRTV+VNFPEVPRGGE +VM  KIR +N S+VD+PHK+YAGNLGW +T+QGL+DAF 
Sbjct: 181 QIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWNLTSQGLKDAFG 240

Query: 181 NHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALSTMNGVELEGRPLRLNMAAERSR 360
           +  G L AKVIYER +GRSRGFGFI+F SA+  +SAL+TMNGVE+EGR LRLN+A+ER +
Sbjct: 241 DQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRLNLASEREK 300

Query: 361 -----------SNTEAYAEQNA*LSSVS 411
                         EA  E N  LS+VS
Sbjct: 301 PTVSPPSVEEGETEEASLESNEVLSNVS 328



 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 23/74 (31%), Positives = 44/74 (59%)
 Frame = +1

Query: 118 KIYAGNLGWGVTTQGLRDAFANHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALST 297
           ++Y GNL + +T+  L   F      +  +++Y++ + RSRGFGF+T  S + A+ A+  
Sbjct: 117 RLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQM 176

Query: 298 MNGVELEGRPLRLN 339
            N  ++ GR +++N
Sbjct: 177 FNSSQIGGRTVKVN 190


>dbj|BAA06523.1| RNA-binding protein cp33 [Arabidopsis thaliana]
          Length = 321

 Score =  182 bits (461), Expect = 1e-43
 Identities = 91/148 (61%), Positives = 112/148 (75%), Gaps = 11/148 (7%)
 Frame = +1

Query: 1   QVGGRTVRVNFPEVPRGGERKVMGPKIRSSNLSFVDTPHKIYAGNLGWGVTTQGLRDAFA 180
           Q+GGRTV+VNFPEVPRGGE +VM  KIR +N S+VD+PHK+YAGNLGW +T+QGL+DAF 
Sbjct: 173 QIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWNLTSQGLKDAFG 232

Query: 181 NHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALSTMNGVELEGRPLRLNMAAERSR 360
           +  G L AKVIYER +GRSRGFGFI+F SA+  +SAL+TMNGVE+EGR LRLN+A+ER +
Sbjct: 233 DQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRLNLASEREK 292

Query: 361 -----------SNTEAYAEQNA*LSSVS 411
                         EA  E N  LS+VS
Sbjct: 293 PTVSPPSVEEGETEEASLESNEVLSNVS 320



 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 23/74 (31%), Positives = 44/74 (59%)
 Frame = +1

Query: 118 KIYAGNLGWGVTTQGLRDAFANHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALST 297
           ++Y GNL + +T+  L   F      +  +++Y++ + RSRGFGF+T  S + A+ A+  
Sbjct: 109 RLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQM 168

Query: 298 MNGVELEGRPLRLN 339
            N  ++ GR +++N
Sbjct: 169 FNSSQIGGRTVKVN 182


>gb|AAL32533.1| ubiquitin / ribosomal protein CEP52 [Arabidopsis thaliana]
          Length = 329

 Score =  181 bits (460), Expect = 2e-43
 Identities = 91/148 (61%), Positives = 112/148 (75%), Gaps = 11/148 (7%)
 Frame = +1

Query: 1   QVGGRTVRVNFPEVPRGGERKVMGPKIRSSNLSFVDTPHKIYAGNLGWGVTTQGLRDAFA 180
           Q+GGRTV+VNFPEVPRGGE +VM  KIR +N S+VD+PHK+YAGNLGW +T+QGL+DAF 
Sbjct: 181 QIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWDLTSQGLKDAFG 240

Query: 181 NHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALSTMNGVELEGRPLRLNMAAERSR 360
           +  G L AKVIYER +GRSRGFGFI+F SA+  +SAL+TMNGVE+EGR LRLN+A+ER +
Sbjct: 241 DQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRLNLASEREK 300

Query: 361 -----------SNTEAYAEQNA*LSSVS 411
                         EA  E N  LS+VS
Sbjct: 301 PTVSPPSVEEGETEEASLESNEVLSNVS 328



 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 23/74 (31%), Positives = 44/74 (59%)
 Frame = +1

Query: 118 KIYAGNLGWGVTTQGLRDAFANHEGFLSAKVIYERESGRSRGFGFITFSSADAAESALST 297
           ++Y GNL + +T+  L   F      +  +++Y++ + RSRGFGF+T  S + A+ A+  
Sbjct: 117 RLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKGAMQM 176

Query: 298 MNGVELEGRPLRLN 339
            N  ++ GR +++N
Sbjct: 177 FNSSQIGGRTVKVN 190