BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00006105
         (903 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...   466   e-129
ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   465   e-128
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...   458   e-126
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...   457   e-126
emb|CBI21038.3| unnamed protein product [Vitis vinifera]              451   e-124
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...   451   e-124
ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   449   e-124
ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   449   e-124
gb|EMJ26639.1| hypothetical protein PRUPE_ppa000422mg [Prunus pe...   449   e-124
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]     447   e-123
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     447   e-123
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    447   e-123
gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]       445   e-122
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot...   445   e-122
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]   444   e-122
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    441   e-121
ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lyco...   441   e-121
ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   438   e-120
gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutu...   437   e-120
ref|XP_003603409.1| Rna-dependent RNA polymerase [Medicago trunc...   437   e-120

>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1198

 Score =  466 bits (1200), Expect = e-129
 Identities = 227/300 (75%), Positives = 257/300 (85%)
 Frame = -2

Query: 902  FKRVNGLLKQGFELCGRMYTFLAFSSNQLRDRSAWFFAEDKRNRRLTVKEIRNWMGKFTN 723
            FKRV  +L +GF LCGR Y+FLAFSSNQLRDRSAWFFAED   R + V  I++WMGKFTN
Sbjct: 488  FKRVRSILTEGFYLCGRRYSFLAFSSNQLRDRSAWFFAED---RNINVMAIKSWMGKFTN 544

Query: 722  KNIAKCAARMGQCFSSTYATVEVSLDQVDSDLPDIKRNDYNFSDGIGIITPDLALEVAEK 543
            KNIAKCAARMGQCFSSTYAT+EV  ++V+SDLPDIKRN Y+FSDGIG+ITPDLA EVAEK
Sbjct: 545  KNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIKRNGYDFSDGIGMITPDLAREVAEK 604

Query: 542  LQLQDSPPSAYQIRFGGCKGVVACWPAKDNKIKLHLRESMNKFISTHSVVEVCSWTRLQP 363
            L+    PP AYQIR+ GCKGVVACWP + + I+L LR SMNKF S H+++E+CSWTR QP
Sbjct: 605  LKFDFDPPCAYQIRYAGCKGVVACWPEQGDGIRLSLRSSMNKFQSNHTILEICSWTRFQP 664

Query: 362  GFLNRQIVTLLSALEVSDEVFWTMQVSMVSKLDQMLVNNEVAFDVLTASCAEQGNTAAIM 183
            GFLNRQI+TLLSAL V D VFW MQ  MVSKL+QMLV+++VAFDVLTASCAEQGN AAIM
Sbjct: 665  GFLNRQIITLLSALNVPDAVFWKMQELMVSKLNQMLVDSDVAFDVLTASCAEQGNVAAIM 724

Query: 182  LSAGFQPQTEPHLRRMLSCIRAAQLGDLREKARIFVESGRWLMGCLDEIGVLEHGQCFIQ 3
            LSAGF+PQ EPHLR ML+C+RAAQL  LREKARIFV SGRWLMGCLDE+GVLE GQCFIQ
Sbjct: 725  LSAGFKPQKEPHLRGMLTCVRAAQLWGLREKARIFVPSGRWLMGCLDELGVLEQGQCFIQ 784


>ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Fragaria vesca subsp.
            vesca]
          Length = 1197

 Score =  465 bits (1196), Expect = e-128
 Identities = 223/300 (74%), Positives = 258/300 (86%)
 Frame = -2

Query: 902  FKRVNGLLKQGFELCGRMYTFLAFSSNQLRDRSAWFFAEDKRNRRLTVKEIRNWMGKFTN 723
            + R+  +L  GF LCGR Y+FLAFSSNQLRDRSAWFFAEDK    ++++ I+NWMG+FTN
Sbjct: 488  YVRIRAILMNGFHLCGRKYSFLAFSSNQLRDRSAWFFAEDKT---ISIQGIKNWMGRFTN 544

Query: 722  KNIAKCAARMGQCFSSTYATVEVSLDQVDSDLPDIKRNDYNFSDGIGIITPDLALEVAEK 543
            +N+AKCAARMGQCFSSTYATVEV   QV+ +LPDI+RN Y FSDGIG ITPDLA+EVAEK
Sbjct: 545  RNVAKCAARMGQCFSSTYATVEVPSTQVNHELPDIERNGYVFSDGIGRITPDLAMEVAEK 604

Query: 542  LQLQDSPPSAYQIRFGGCKGVVACWPAKDNKIKLHLRESMNKFISTHSVVEVCSWTRLQP 363
            L+L   PPSAYQIR+GGCKGVVACWP+  +  +L LR SMNKF S H+ +E+CSWTRLQP
Sbjct: 605  LKLDRDPPSAYQIRYGGCKGVVACWPSTGDGFRLSLRRSMNKFASDHTTLEICSWTRLQP 664

Query: 362  GFLNRQIVTLLSALEVSDEVFWTMQVSMVSKLDQMLVNNEVAFDVLTASCAEQGNTAAIM 183
            GFLNRQI+TLLSAL V DE+FWTMQ +MVSKL QMLV+ +VAFDVLTASCAEQGN+AAIM
Sbjct: 665  GFLNRQIITLLSALNVPDEIFWTMQETMVSKLKQMLVDTDVAFDVLTASCAEQGNSAAIM 724

Query: 182  LSAGFQPQTEPHLRRMLSCIRAAQLGDLREKARIFVESGRWLMGCLDEIGVLEHGQCFIQ 3
            LSAGF+PQTEPHLR ML+CI+AAQL  LREK RIFV SGRWLMGCLDE+GVLE GQCF+Q
Sbjct: 725  LSAGFKPQTEPHLRGMLTCIQAAQLWGLREKTRIFVPSGRWLMGCLDELGVLEQGQCFVQ 784


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 1203

 Score =  458 bits (1179), Expect = e-126
 Identities = 224/300 (74%), Positives = 255/300 (85%)
 Frame = -2

Query: 902  FKRVNGLLKQGFELCGRMYTFLAFSSNQLRDRSAWFFAEDKRNRRLTVKEIRNWMGKFTN 723
            FKRV  +L  GF LCGR Y+FLAFSSNQLRDRSAWFFAED +    +V +IRNWMGKFTN
Sbjct: 488  FKRVKSILTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKT---SVSKIRNWMGKFTN 544

Query: 722  KNIAKCAARMGQCFSSTYATVEVSLDQVDSDLPDIKRNDYNFSDGIGIITPDLALEVAEK 543
            +NIAKCAARMGQCFSSTYATVEV   +   DLPDI+RN+Y FSDGIG+ITPDLA EVAEK
Sbjct: 545  RNIAKCAARMGQCFSSTYATVEVPSAEAILDLPDIERNNYIFSDGIGMITPDLAKEVAEK 604

Query: 542  LQLQDSPPSAYQIRFGGCKGVVACWPAKDNKIKLHLRESMNKFISTHSVVEVCSWTRLQP 363
            L+L+ +PP AYQIR+ GCKGVVACWPA  + I+L LR SMNKF S H+ +E+CSWTR QP
Sbjct: 605  LKLEVNPPCAYQIRYAGCKGVVACWPAHIDGIRLSLRVSMNKFHSNHTTLEICSWTRFQP 664

Query: 362  GFLNRQIVTLLSALEVSDEVFWTMQVSMVSKLDQMLVNNEVAFDVLTASCAEQGNTAAIM 183
            GFLNRQI+TLLS L+V DE+FW MQ+ MVSKL+QM ++ +VAFDV+TASCAEQGNTAAIM
Sbjct: 665  GFLNRQIITLLSTLDVPDEIFWKMQIVMVSKLNQMFMDADVAFDVVTASCAEQGNTAAIM 724

Query: 182  LSAGFQPQTEPHLRRMLSCIRAAQLGDLREKARIFVESGRWLMGCLDEIGVLEHGQCFIQ 3
            LSAGF P+TEPHL  ML+CIRAAQL  LREK RIFV SGRWLMGCLDE+GVLEHGQCFIQ
Sbjct: 725  LSAGFNPKTEPHLCGMLTCIRAAQLWGLREKTRIFVPSGRWLMGCLDELGVLEHGQCFIQ 784


>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1200

 Score =  457 bits (1176), Expect = e-126
 Identities = 218/300 (72%), Positives = 256/300 (85%)
 Frame = -2

Query: 902  FKRVNGLLKQGFELCGRMYTFLAFSSNQLRDRSAWFFAEDKRNRRLTVKEIRNWMGKFTN 723
            FKRV  +L +GF LCGR Y+FLAFS+NQLRD+SAWFF+E+   R ++V ++++WMGKFTN
Sbjct: 491  FKRVRSILTEGFYLCGRRYSFLAFSANQLRDQSAWFFSEE---RNISVLDVKSWMGKFTN 547

Query: 722  KNIAKCAARMGQCFSSTYATVEVSLDQVDSDLPDIKRNDYNFSDGIGIITPDLALEVAEK 543
            +NIAKCAARMGQCFSSTYAT+EV  ++V+SDLPDI+RN Y FSDGIGIITPDLA EVAEK
Sbjct: 548  RNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIERNGYVFSDGIGIITPDLAREVAEK 607

Query: 542  LQLQDSPPSAYQIRFGGCKGVVACWPAKDNKIKLHLRESMNKFISTHSVVEVCSWTRLQP 363
            L+L   PP AYQIR+ GCKGVVACWP K + ++L LR SMNKF S H+ +E+CSWTR QP
Sbjct: 608  LKLDIDPPCAYQIRYAGCKGVVACWPGKGDGVRLSLRPSMNKFQSNHTTLEICSWTRFQP 667

Query: 362  GFLNRQIVTLLSALEVSDEVFWTMQVSMVSKLDQMLVNNEVAFDVLTASCAEQGNTAAIM 183
            GFLNRQI+TLLS L V D VFW MQ +MVSKL+QM VN++VAFDVLTASCA+QGN AAIM
Sbjct: 668  GFLNRQIITLLSTLNVPDAVFWKMQETMVSKLNQMFVNSDVAFDVLTASCADQGNVAAIM 727

Query: 182  LSAGFQPQTEPHLRRMLSCIRAAQLGDLREKARIFVESGRWLMGCLDEIGVLEHGQCFIQ 3
            LSAGF+P  EPHLR ML+C+RAAQL DLREK RIFV SGRWLMGCLDE+G+LE GQCFIQ
Sbjct: 728  LSAGFKPDREPHLRGMLTCVRAAQLWDLREKTRIFVPSGRWLMGCLDELGMLEQGQCFIQ 787


>emb|CBI21038.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score =  451 bits (1160), Expect = e-124
 Identities = 222/300 (74%), Positives = 258/300 (86%)
 Frame = -2

Query: 902  FKRVNGLLKQGFELCGRMYTFLAFSSNQLRDRSAWFFAEDKRNRRLTVKEIRNWMGKFTN 723
            FKRV  +L  GF LCGR Y+FLAFSSNQLRDRSAWFFAEDK+    +V+ I++WMGKFTN
Sbjct: 328  FKRVKTILTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKKT---SVRAIKSWMGKFTN 384

Query: 722  KNIAKCAARMGQCFSSTYATVEVSLDQVDSDLPDIKRNDYNFSDGIGIITPDLALEVAEK 543
            +N+AKCAARMGQCFSSTYATVEV   +V  +LPDIKRN Y+FSDGIG I PDLA+EVAEK
Sbjct: 385  RNVAKCAARMGQCFSSTYATVEVPSWEV-KELPDIKRNGYDFSDGIGKIVPDLAMEVAEK 443

Query: 542  LQLQDSPPSAYQIRFGGCKGVVACWPAKDNKIKLHLRESMNKFISTHSVVEVCSWTRLQP 363
            L+L+ +P SAYQIR+ GCKGVVACWP+ ++ I+L  R SMNKF+S H+++E+CSWTR QP
Sbjct: 444  LKLEGTP-SAYQIRYAGCKGVVACWPSDNDGIRLSWRPSMNKFLSDHTILEICSWTRFQP 502

Query: 362  GFLNRQIVTLLSALEVSDEVFWTMQVSMVSKLDQMLVNNEVAFDVLTASCAEQGNTAAIM 183
            GFLNRQIVTLLSAL V D++FW MQ SM+SKL+QML + +VAFDVL ASCAEQGNTAAIM
Sbjct: 503  GFLNRQIVTLLSALNVPDKIFWKMQESMISKLNQMLTDTDVAFDVLIASCAEQGNTAAIM 562

Query: 182  LSAGFQPQTEPHLRRMLSCIRAAQLGDLREKARIFVESGRWLMGCLDEIGVLEHGQCFIQ 3
            LSAGF+PQTEPHL+ ML+CIRAAQ   LREKARIFV SGRWLMGCLDE+GVLE GQCFIQ
Sbjct: 563  LSAGFKPQTEPHLQGMLTCIRAAQFWGLREKARIFVPSGRWLMGCLDELGVLEQGQCFIQ 622


>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score =  451 bits (1160), Expect = e-124
 Identities = 222/300 (74%), Positives = 258/300 (86%)
 Frame = -2

Query: 902  FKRVNGLLKQGFELCGRMYTFLAFSSNQLRDRSAWFFAEDKRNRRLTVKEIRNWMGKFTN 723
            FKRV  +L  GF LCGR Y+FLAFSSNQLRDRSAWFFAEDK+    +V+ I++WMGKFTN
Sbjct: 490  FKRVKTILTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKKT---SVRAIKSWMGKFTN 546

Query: 722  KNIAKCAARMGQCFSSTYATVEVSLDQVDSDLPDIKRNDYNFSDGIGIITPDLALEVAEK 543
            +N+AKCAARMGQCFSSTYATVEV   +V  +LPDIKRN Y+FSDGIG I PDLA+EVAEK
Sbjct: 547  RNVAKCAARMGQCFSSTYATVEVPSWEV-KELPDIKRNGYDFSDGIGKIVPDLAMEVAEK 605

Query: 542  LQLQDSPPSAYQIRFGGCKGVVACWPAKDNKIKLHLRESMNKFISTHSVVEVCSWTRLQP 363
            L+L+ +P SAYQIR+ GCKGVVACWP+ ++ I+L  R SMNKF+S H+++E+CSWTR QP
Sbjct: 606  LKLEGTP-SAYQIRYAGCKGVVACWPSDNDGIRLSWRPSMNKFLSDHTILEICSWTRFQP 664

Query: 362  GFLNRQIVTLLSALEVSDEVFWTMQVSMVSKLDQMLVNNEVAFDVLTASCAEQGNTAAIM 183
            GFLNRQIVTLLSAL V D++FW MQ SM+SKL+QML + +VAFDVL ASCAEQGNTAAIM
Sbjct: 665  GFLNRQIVTLLSALNVPDKIFWKMQESMISKLNQMLTDTDVAFDVLIASCAEQGNTAAIM 724

Query: 182  LSAGFQPQTEPHLRRMLSCIRAAQLGDLREKARIFVESGRWLMGCLDEIGVLEHGQCFIQ 3
            LSAGF+PQTEPHL+ ML+CIRAAQ   LREKARIFV SGRWLMGCLDE+GVLE GQCFIQ
Sbjct: 725  LSAGFKPQTEPHLQGMLTCIRAAQFWGLREKARIFVPSGRWLMGCLDELGVLEQGQCFIQ 784


>ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X3 [Citrus
            sinensis]
          Length = 1025

 Score =  449 bits (1155), Expect = e-124
 Identities = 221/301 (73%), Positives = 258/301 (85%), Gaps = 1/301 (0%)
 Frame = -2

Query: 902  FKRVNGLLKQGFELCGRMYTFLAFSSNQLRDRSAWFFAEDKRNRRLTVKEIRNWMGKFTN 723
            FKRV  +L  GF LCGR ++FLAFSS+QLRD SAWFF+ED +    +V +I+ WMG+FT+
Sbjct: 488  FKRVRSILSGGFYLCGRKFSFLAFSSSQLRDCSAWFFSEDGKT---SVLDIKKWMGRFTD 544

Query: 722  KNIAKCAARMGQCFSSTYATVEVSLDQVDSDLPDIKRNDYNFSDGIGIITPDLALEVAEK 543
            KNIAKCAARMGQCFSSTYATVEV   +VD +LPDIKRN Y FSDGIG ITPDLA+EVA+K
Sbjct: 545  KNIAKCAARMGQCFSSTYATVEVPPTEVDPELPDIKRNGYVFSDGIGKITPDLAMEVAQK 604

Query: 542  LQLQ-DSPPSAYQIRFGGCKGVVACWPAKDNKIKLHLRESMNKFISTHSVVEVCSWTRLQ 366
            L+L  + PP AYQIR+ GCKGVVACWPAK + I++ LRESMNKF S H+ +E+CSWTR Q
Sbjct: 605  LKLDVNPPPCAYQIRYAGCKGVVACWPAKGDGIRMSLRESMNKFQSHHTTLEICSWTRFQ 664

Query: 365  PGFLNRQIVTLLSALEVSDEVFWTMQVSMVSKLDQMLVNNEVAFDVLTASCAEQGNTAAI 186
            PGFLNRQI+TLLS L V DE+FW+MQ SM+SKL+QMLV+++VAF+VLTA+CAEQGNTAAI
Sbjct: 665  PGFLNRQIITLLSTLNVPDEMFWSMQDSMLSKLNQMLVDSDVAFEVLTAACAEQGNTAAI 724

Query: 185  MLSAGFQPQTEPHLRRMLSCIRAAQLGDLREKARIFVESGRWLMGCLDEIGVLEHGQCFI 6
            MLSAGF PQTEPHLR ML+CIRAAQL  LREKARIFV +GRWLMGCLDE+GVLE GQCFI
Sbjct: 725  MLSAGFNPQTEPHLRGMLTCIRAAQLWGLREKARIFVPAGRWLMGCLDELGVLEGGQCFI 784

Query: 5    Q 3
            Q
Sbjct: 785  Q 785


>ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus
            sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Citrus
            sinensis]
          Length = 1197

 Score =  449 bits (1155), Expect = e-124
 Identities = 221/301 (73%), Positives = 258/301 (85%), Gaps = 1/301 (0%)
 Frame = -2

Query: 902  FKRVNGLLKQGFELCGRMYTFLAFSSNQLRDRSAWFFAEDKRNRRLTVKEIRNWMGKFTN 723
            FKRV  +L  GF LCGR ++FLAFSS+QLRD SAWFF+ED +    +V +I+ WMG+FT+
Sbjct: 488  FKRVRSILSGGFYLCGRKFSFLAFSSSQLRDCSAWFFSEDGKT---SVLDIKKWMGRFTD 544

Query: 722  KNIAKCAARMGQCFSSTYATVEVSLDQVDSDLPDIKRNDYNFSDGIGIITPDLALEVAEK 543
            KNIAKCAARMGQCFSSTYATVEV   +VD +LPDIKRN Y FSDGIG ITPDLA+EVA+K
Sbjct: 545  KNIAKCAARMGQCFSSTYATVEVPPTEVDPELPDIKRNGYVFSDGIGKITPDLAMEVAQK 604

Query: 542  LQLQ-DSPPSAYQIRFGGCKGVVACWPAKDNKIKLHLRESMNKFISTHSVVEVCSWTRLQ 366
            L+L  + PP AYQIR+ GCKGVVACWPAK + I++ LRESMNKF S H+ +E+CSWTR Q
Sbjct: 605  LKLDVNPPPCAYQIRYAGCKGVVACWPAKGDGIRMSLRESMNKFQSHHTTLEICSWTRFQ 664

Query: 365  PGFLNRQIVTLLSALEVSDEVFWTMQVSMVSKLDQMLVNNEVAFDVLTASCAEQGNTAAI 186
            PGFLNRQI+TLLS L V DE+FW+MQ SM+SKL+QMLV+++VAF+VLTA+CAEQGNTAAI
Sbjct: 665  PGFLNRQIITLLSTLNVPDEMFWSMQDSMLSKLNQMLVDSDVAFEVLTAACAEQGNTAAI 724

Query: 185  MLSAGFQPQTEPHLRRMLSCIRAAQLGDLREKARIFVESGRWLMGCLDEIGVLEHGQCFI 6
            MLSAGF PQTEPHLR ML+CIRAAQL  LREKARIFV +GRWLMGCLDE+GVLE GQCFI
Sbjct: 725  MLSAGFNPQTEPHLRGMLTCIRAAQLWGLREKARIFVPAGRWLMGCLDELGVLEGGQCFI 784

Query: 5    Q 3
            Q
Sbjct: 785  Q 785


>gb|EMJ26639.1| hypothetical protein PRUPE_ppa000422mg [Prunus persica]
          Length = 1196

 Score =  449 bits (1154), Expect = e-124
 Identities = 222/300 (74%), Positives = 251/300 (83%)
 Frame = -2

Query: 902  FKRVNGLLKQGFELCGRMYTFLAFSSNQLRDRSAWFFAEDKRNRRLTVKEIRNWMGKFTN 723
            FKR   +L  GF LCGR YTFLAFSSNQLRDRSAWFFAE      ++V +I +WMGKF N
Sbjct: 487  FKRFRTILNDGFYLCGRKYTFLAFSSNQLRDRSAWFFAECVN---ISVGKITSWMGKFNN 543

Query: 722  KNIAKCAARMGQCFSSTYATVEVSLDQVDSDLPDIKRNDYNFSDGIGIITPDLALEVAEK 543
            KN+AKCAARMGQCFSSTYATVEV+  +V+ D+PDIKRN Y FSDGIG+ITPDLALEVAEK
Sbjct: 544  KNVAKCAARMGQCFSSTYATVEVTSSEVN-DIPDIKRNGYVFSDGIGMITPDLALEVAEK 602

Query: 542  LQLQDSPPSAYQIRFGGCKGVVACWPAKDNKIKLHLRESMNKFISTHSVVEVCSWTRLQP 363
            L+L  +PP AYQIRF GCKGVVACWP+K +  +L LR SMNKF S H+ +E+CSWTR QP
Sbjct: 603  LKLDRNPPCAYQIRFAGCKGVVACWPSKGDGFRLSLRTSMNKFESKHTTLEICSWTRYQP 662

Query: 362  GFLNRQIVTLLSALEVSDEVFWTMQVSMVSKLDQMLVNNEVAFDVLTASCAEQGNTAAIM 183
            GFLNRQI+TLLS L V DE+FW MQ  MV KL+QMLV+ +VAFDVLTASCAEQGN AAIM
Sbjct: 663  GFLNRQIITLLSTLNVEDEIFWRMQEKMVLKLNQMLVDTDVAFDVLTASCAEQGNAAAIM 722

Query: 182  LSAGFQPQTEPHLRRMLSCIRAAQLGDLREKARIFVESGRWLMGCLDEIGVLEHGQCFIQ 3
            LSAGF+PQTEPHLR ML+CI+AAQL  LREKARIFV SGRWLMG LDE+GVLE GQCF+Q
Sbjct: 723  LSAGFKPQTEPHLRGMLTCIQAAQLWGLREKARIFVHSGRWLMGVLDELGVLEQGQCFVQ 782


>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
          Length = 1197

 Score =  447 bits (1150), Expect = e-123
 Identities = 216/300 (72%), Positives = 256/300 (85%)
 Frame = -2

Query: 902  FKRVNGLLKQGFELCGRMYTFLAFSSNQLRDRSAWFFAEDKRNRRLTVKEIRNWMGKFTN 723
            F+RV  +L +GF LCGR Y+FLAFS+NQLRDRSAWFFAED + R   V  I +WMG+F+N
Sbjct: 488  FQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIR---VPGIISWMGRFSN 544

Query: 722  KNIAKCAARMGQCFSSTYATVEVSLDQVDSDLPDIKRNDYNFSDGIGIITPDLALEVAEK 543
            +N+AKCAARMGQCFSSTYATVEV   +V+S+LPDI+RN Y FSDGIG+I+ DLA+EVAEK
Sbjct: 545  RNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAVEVAEK 604

Query: 542  LQLQDSPPSAYQIRFGGCKGVVACWPAKDNKIKLHLRESMNKFISTHSVVEVCSWTRLQP 363
            L L  +PPSAYQIR+ GCKGVVACWP K++ I+L LR SM KF S H+++E+CSWTR QP
Sbjct: 605  LHLSVNPPSAYQIRYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSWTRFQP 664

Query: 362  GFLNRQIVTLLSALEVSDEVFWTMQVSMVSKLDQMLVNNEVAFDVLTASCAEQGNTAAIM 183
            GFLNRQIVTLLS+L+V D +FW MQ  M+S LD+MLV+++VAFDV+TASCAE GNTAAIM
Sbjct: 665  GFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGNTAAIM 724

Query: 182  LSAGFQPQTEPHLRRMLSCIRAAQLGDLREKARIFVESGRWLMGCLDEIGVLEHGQCFIQ 3
            LSAGF+PQ+EPHLR MLS IRA+QLGDLR KARIFV SGRWLMGCLDE+G LE GQCFIQ
Sbjct: 725  LSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQ 784


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  447 bits (1149), Expect = e-123
 Identities = 215/300 (71%), Positives = 256/300 (85%)
 Frame = -2

Query: 902  FKRVNGLLKQGFELCGRMYTFLAFSSNQLRDRSAWFFAEDKRNRRLTVKEIRNWMGKFTN 723
            F+RV  +L +GF LCGR Y+FLAFS+NQLRDRSAWFFAED + R   V  I +WMG+F+N
Sbjct: 488  FQRVKSILSKGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIR---VPGIISWMGRFSN 544

Query: 722  KNIAKCAARMGQCFSSTYATVEVSLDQVDSDLPDIKRNDYNFSDGIGIITPDLALEVAEK 543
            +N+AKCAARMGQCFSSTYATVEV   +V+S+LPDI+RN Y FSDGIG+I+ DLA+EVAEK
Sbjct: 545  RNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAIEVAEK 604

Query: 542  LQLQDSPPSAYQIRFGGCKGVVACWPAKDNKIKLHLRESMNKFISTHSVVEVCSWTRLQP 363
            L L  +PPSAYQIR+ GCKGVVACWP K++ I+L LR SM KF S H+++E+CSWTR QP
Sbjct: 605  LHLSVNPPSAYQIRYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSWTRFQP 664

Query: 362  GFLNRQIVTLLSALEVSDEVFWTMQVSMVSKLDQMLVNNEVAFDVLTASCAEQGNTAAIM 183
            GFLNRQIVTLLS+L+V D +FW MQ  M+S LD+MLV+++VAFDV+TASCAE GNTAA+M
Sbjct: 665  GFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGNTAALM 724

Query: 182  LSAGFQPQTEPHLRRMLSCIRAAQLGDLREKARIFVESGRWLMGCLDEIGVLEHGQCFIQ 3
            LSAGF+PQ+EPHLR MLS IRA+QLGDLR KARIFV SGRWLMGCLDE+G LE GQCFIQ
Sbjct: 725  LSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQ 784


>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  447 bits (1149), Expect = e-123
 Identities = 216/300 (72%), Positives = 256/300 (85%)
 Frame = -2

Query: 902  FKRVNGLLKQGFELCGRMYTFLAFSSNQLRDRSAWFFAEDKRNRRLTVKEIRNWMGKFTN 723
            F+RV  +L +GF LCGR Y+FLAFS+NQLRDRSAWFFAED + R   V  I +WMG+F+N
Sbjct: 488  FQRVKSILSKGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIR---VPGIISWMGRFSN 544

Query: 722  KNIAKCAARMGQCFSSTYATVEVSLDQVDSDLPDIKRNDYNFSDGIGIITPDLALEVAEK 543
            +N+AKCAARMGQCFSSTYATVEV   +V+S+LPDI+RN Y FSDGIG+I+ DLA+EVAEK
Sbjct: 545  RNVAKCAARMGQCFSSTYATVEVPSREVNSELPDIERNGYVFSDGIGMISADLAIEVAEK 604

Query: 542  LQLQDSPPSAYQIRFGGCKGVVACWPAKDNKIKLHLRESMNKFISTHSVVEVCSWTRLQP 363
            L L  +PPSAYQIR+ GCKGVVACWP K++ I+L LR SM KF S H+++E+CSWTR QP
Sbjct: 605  LHLSVNPPSAYQIRYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSWTRFQP 664

Query: 362  GFLNRQIVTLLSALEVSDEVFWTMQVSMVSKLDQMLVNNEVAFDVLTASCAEQGNTAAIM 183
            GFLNRQIVTLLS+L+V D +FW MQ  M+S LD+MLV+++VAFDV+TASCAE GNTAAIM
Sbjct: 665  GFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGNTAAIM 724

Query: 182  LSAGFQPQTEPHLRRMLSCIRAAQLGDLREKARIFVESGRWLMGCLDEIGVLEHGQCFIQ 3
            LSAGF+PQ+EPHLR MLS IRA+QLGDLR KARIFV SGRWLMGCLDE+G LE GQCFIQ
Sbjct: 725  LSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQ 784


>gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]
          Length = 1194

 Score =  445 bits (1144), Expect = e-122
 Identities = 218/300 (72%), Positives = 251/300 (83%)
 Frame = -2

Query: 902  FKRVNGLLKQGFELCGRMYTFLAFSSNQLRDRSAWFFAEDKRNRRLTVKEIRNWMGKFTN 723
            FKRV  LL  GF LCG+ Y+FLAFSSNQLRDRSAWFFAED +   +TV  I+ WMG+F N
Sbjct: 484  FKRVKSLLTDGFYLCGQRYSFLAFSSNQLRDRSAWFFAEDGK---ITVNGIKKWMGRFNN 540

Query: 722  KNIAKCAARMGQCFSSTYATVEVSLDQVDSDLPDIKRNDYNFSDGIGIITPDLALEVAEK 543
            +NIAKCAARMGQCFSSTYATVEV L +V+ DL +I+RN Y FSDGIG+ITPDLA EVAEK
Sbjct: 541  RNIAKCAARMGQCFSSTYATVEVPLTEVNFDLEEIERNTYVFSDGIGMITPDLAKEVAEK 600

Query: 542  LQLQDSPPSAYQIRFGGCKGVVACWPAKDNKIKLHLRESMNKFISTHSVVEVCSWTRLQP 363
            L+L  +PPSAYQIR+ GCKGVVACWP K + I+L LR SMNKF S H+++E+CSWTR QP
Sbjct: 601  LKLDINPPSAYQIRYAGCKGVVACWPPKGDGIRLSLRRSMNKFDSKHTILEICSWTRFQP 660

Query: 362  GFLNRQIVTLLSALEVSDEVFWTMQVSMVSKLDQMLVNNEVAFDVLTASCAEQGNTAAIM 183
            GFLNRQIVTLLS L V DE+FW MQ +M+ KL+QML + +VAF+VLTASC EQGN  AIM
Sbjct: 661  GFLNRQIVTLLSTLNVRDEIFWKMQETMLFKLNQMLTDADVAFNVLTASCPEQGNVGAIM 720

Query: 182  LSAGFQPQTEPHLRRMLSCIRAAQLGDLREKARIFVESGRWLMGCLDEIGVLEHGQCFIQ 3
            LSAGF+PQ+EPHL+ ML+CIRAAQL  LREKARIFV  GRWLMGCLDE+GVLE GQCFIQ
Sbjct: 721  LSAGFKPQSEPHLQGMLTCIRAAQLWGLREKARIFVPLGRWLMGCLDELGVLEQGQCFIQ 780


>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
          Length = 1197

 Score =  445 bits (1144), Expect = e-122
 Identities = 216/300 (72%), Positives = 255/300 (85%)
 Frame = -2

Query: 902  FKRVNGLLKQGFELCGRMYTFLAFSSNQLRDRSAWFFAEDKRNRRLTVKEIRNWMGKFTN 723
            F+RV  +L +GF LCGR Y+FLAFS+NQLRDRSAWFFAED + R   V  I +WMG+F+N
Sbjct: 488  FQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIR---VPGIISWMGRFSN 544

Query: 722  KNIAKCAARMGQCFSSTYATVEVSLDQVDSDLPDIKRNDYNFSDGIGIITPDLALEVAEK 543
            +N+AKCAARMGQCFSSTYATVEV   +V+S+LPDI+RN Y FSDGIG+I+ DLALEVAEK
Sbjct: 545  RNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLALEVAEK 604

Query: 542  LQLQDSPPSAYQIRFGGCKGVVACWPAKDNKIKLHLRESMNKFISTHSVVEVCSWTRLQP 363
            L L  +PPSAYQIR+ GCKGVVACWP K++ I L LR SM KF S H+++E+CSWTR QP
Sbjct: 605  LHLSVNPPSAYQIRYAGCKGVVACWPTKNDGILLSLRPSMKKFDSNHTILEICSWTRFQP 664

Query: 362  GFLNRQIVTLLSALEVSDEVFWTMQVSMVSKLDQMLVNNEVAFDVLTASCAEQGNTAAIM 183
            GFLNRQIVTLLS+L+V D +FW MQ  M+S L++MLV+++VAFDV+TASCAE GNTAAIM
Sbjct: 665  GFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLNKMLVDSDVAFDVITASCAEAGNTAAIM 724

Query: 182  LSAGFQPQTEPHLRRMLSCIRAAQLGDLREKARIFVESGRWLMGCLDEIGVLEHGQCFIQ 3
            LSAGF+PQ+EPHLR MLS IRA+QLGDLR KARIFV SGRWLMGCLDE+G LE GQCFIQ
Sbjct: 725  LSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQ 784


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score =  444 bits (1143), Expect = e-122
 Identities = 213/300 (71%), Positives = 256/300 (85%)
 Frame = -2

Query: 902  FKRVNGLLKQGFELCGRMYTFLAFSSNQLRDRSAWFFAEDKRNRRLTVKEIRNWMGKFTN 723
            F+RV  +L +GF LCGR Y+FLAFS+NQLRDRSAWFFAED + R   V  I +WMG+F+N
Sbjct: 488  FQRVKSILSKGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIR---VPGIISWMGRFSN 544

Query: 722  KNIAKCAARMGQCFSSTYATVEVSLDQVDSDLPDIKRNDYNFSDGIGIITPDLALEVAEK 543
            +N+AKCAARMGQCFSSTYATVEV   +V+S+LPDI+RN Y FSDGIG+I+ DLA+EVAEK
Sbjct: 545  RNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAIEVAEK 604

Query: 542  LQLQDSPPSAYQIRFGGCKGVVACWPAKDNKIKLHLRESMNKFISTHSVVEVCSWTRLQP 363
            L L  +PP+AYQIR+ GCKGVVACWP K++ I+L LR SM KF S H+++E+CSWTR QP
Sbjct: 605  LHLSVNPPAAYQIRYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSWTRFQP 664

Query: 362  GFLNRQIVTLLSALEVSDEVFWTMQVSMVSKLDQMLVNNEVAFDVLTASCAEQGNTAAIM 183
            GFLNRQIVTLLS+L+V D +FW MQ  M++ LD+MLV+++VAFDV+TASCAE GNTAA+M
Sbjct: 665  GFLNRQIVTLLSSLDVKDGIFWEMQKEMIAGLDKMLVDSDVAFDVITASCAEAGNTAALM 724

Query: 182  LSAGFQPQTEPHLRRMLSCIRAAQLGDLREKARIFVESGRWLMGCLDEIGVLEHGQCFIQ 3
            LSAGF+PQ+EPHLR MLS IRA+QLGDLR KARIFV SGRWLMGCLDE+G LE GQCFIQ
Sbjct: 725  LSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQ 784


>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  441 bits (1134), Expect = e-121
 Identities = 214/300 (71%), Positives = 254/300 (84%)
 Frame = -2

Query: 902  FKRVNGLLKQGFELCGRMYTFLAFSSNQLRDRSAWFFAEDKRNRRLTVKEIRNWMGKFTN 723
            F+RV  +L +GF LCGR Y+FLAFS+NQLRDRSAWFFAED + R   V  I +WMG+F+N
Sbjct: 488  FQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIR---VPGIISWMGRFSN 544

Query: 722  KNIAKCAARMGQCFSSTYATVEVSLDQVDSDLPDIKRNDYNFSDGIGIITPDLALEVAEK 543
            +N+AKCAARMGQCFSSTYATVEV   +V+S+LPDI+RN Y FSDGIG+I+ DLA+EVAEK
Sbjct: 545  RNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAIEVAEK 604

Query: 542  LQLQDSPPSAYQIRFGGCKGVVACWPAKDNKIKLHLRESMNKFISTHSVVEVCSWTRLQP 363
            L L  +PPSAYQIR+ G KGVVACWP K++ I L LR SM KF S H+++E+CSWTR QP
Sbjct: 605  LHLNVNPPSAYQIRYAGYKGVVACWPTKNDGILLSLRPSMKKFDSNHTILEICSWTRFQP 664

Query: 362  GFLNRQIVTLLSALEVSDEVFWTMQVSMVSKLDQMLVNNEVAFDVLTASCAEQGNTAAIM 183
            GFLNRQIVTLLS+L+V D +FW MQ  M+S LD+MLV+++VAFDV+TASCAE GNTAA+M
Sbjct: 665  GFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGNTAALM 724

Query: 182  LSAGFQPQTEPHLRRMLSCIRAAQLGDLREKARIFVESGRWLMGCLDEIGVLEHGQCFIQ 3
            LSAGF+PQ+EPHLR MLS IRA+QLGDLR KARIFV SGRWLMGCLDE+G LE GQCFIQ
Sbjct: 725  LSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQ 784


>ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lycopersicum]
            gi|397529811|gb|AFO53516.1| RNA-dependent RNA polymerase
            6 [Solanum lycopersicum]
          Length = 1197

 Score =  441 bits (1133), Expect = e-121
 Identities = 214/300 (71%), Positives = 254/300 (84%)
 Frame = -2

Query: 902  FKRVNGLLKQGFELCGRMYTFLAFSSNQLRDRSAWFFAEDKRNRRLTVKEIRNWMGKFTN 723
            F+RV  ++ +GF LCGR Y+FLAFS+NQLRDRSAWFFAE    R   V  I NWMGKF N
Sbjct: 488  FQRVKIIVNKGFYLCGRRYSFLAFSANQLRDRSAWFFAETPEIR---VTSIINWMGKFGN 544

Query: 722  KNIAKCAARMGQCFSSTYATVEVSLDQVDSDLPDIKRNDYNFSDGIGIITPDLALEVAEK 543
            +N+AKCAARMGQCFSSTYATVEV   +V+S+LPDI+RN Y FSDGIG++T DL++EVA K
Sbjct: 545  RNVAKCAARMGQCFSSTYATVEVLPSEVNSELPDIERNGYVFSDGIGMMTADLSIEVAAK 604

Query: 542  LQLQDSPPSAYQIRFGGCKGVVACWPAKDNKIKLHLRESMNKFISTHSVVEVCSWTRLQP 363
            LQL  +PP AYQIR+ GCKGVVACWPA+ + I+L LR SM KF S H+++E+CSWTRLQP
Sbjct: 605  LQLSVNPPCAYQIRYAGCKGVVACWPAEKDGIRLSLRPSMKKFDSNHTILEICSWTRLQP 664

Query: 362  GFLNRQIVTLLSALEVSDEVFWTMQVSMVSKLDQMLVNNEVAFDVLTASCAEQGNTAAIM 183
            GFLNRQI+TLLS+LEV DE+FW MQ  M+SKLD++LV+++VAFDV+TASCAE GNTAAIM
Sbjct: 665  GFLNRQIITLLSSLEVKDEMFWEMQKEMLSKLDKILVDSDVAFDVITASCAEAGNTAAIM 724

Query: 182  LSAGFQPQTEPHLRRMLSCIRAAQLGDLREKARIFVESGRWLMGCLDEIGVLEHGQCFIQ 3
            LSAGF+PQ+EPHLR ML+ IRAAQLGDLR K R+FV SGRWLMGCLDE+G LE GQCFIQ
Sbjct: 725  LSAGFKPQSEPHLRGMLASIRAAQLGDLRNKTRMFVTSGRWLMGCLDELGELEQGQCFIQ 784


>ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum
            tuberosum] gi|565360032|ref|XP_006346785.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Solanum
            tuberosum]
          Length = 1198

 Score =  438 bits (1127), Expect = e-120
 Identities = 213/300 (71%), Positives = 253/300 (84%)
 Frame = -2

Query: 902  FKRVNGLLKQGFELCGRMYTFLAFSSNQLRDRSAWFFAEDKRNRRLTVKEIRNWMGKFTN 723
            F+RV  +L +GF LCGR Y+FLAFS+NQLRDRSAWFFAE    R   V  I NWMGKF N
Sbjct: 489  FQRVKSILSKGFYLCGRRYSFLAFSANQLRDRSAWFFAEAPEIR---VPNIINWMGKFGN 545

Query: 722  KNIAKCAARMGQCFSSTYATVEVSLDQVDSDLPDIKRNDYNFSDGIGIITPDLALEVAEK 543
            +N+AKCAARMGQCFSSTYATVEV   +V+S+LPDI+RN Y FSDGIG+++ DL++EVA K
Sbjct: 546  RNVAKCAARMGQCFSSTYATVEVLPSEVNSELPDIERNGYVFSDGIGMMSADLSIEVAAK 605

Query: 542  LQLQDSPPSAYQIRFGGCKGVVACWPAKDNKIKLHLRESMNKFISTHSVVEVCSWTRLQP 363
            LQL  +PP AYQIR+ GCKGVVACWPA+ + I+L LR SM KF S H+++E+CSWTRLQP
Sbjct: 606  LQLSVNPPCAYQIRYAGCKGVVACWPAEKDGIRLSLRPSMKKFDSNHTILEICSWTRLQP 665

Query: 362  GFLNRQIVTLLSALEVSDEVFWTMQVSMVSKLDQMLVNNEVAFDVLTASCAEQGNTAAIM 183
            GFLNRQI+TLLS+LEV DE+FW MQ  M+SKLD++LV+++VAFDV+TASCAE GNTAAIM
Sbjct: 666  GFLNRQIITLLSSLEVKDEMFWEMQKEMLSKLDKILVDSDVAFDVITASCAEAGNTAAIM 725

Query: 182  LSAGFQPQTEPHLRRMLSCIRAAQLGDLREKARIFVESGRWLMGCLDEIGVLEHGQCFIQ 3
            LSAGF+PQ+EPHLR ML+ IRAAQLGDLR K R+FV SGRWLMGCLDE+  LE GQCFIQ
Sbjct: 726  LSAGFKPQSEPHLRGMLASIRAAQLGDLRNKTRMFVPSGRWLMGCLDELRKLEQGQCFIQ 785


>gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum]
            gi|295885034|gb|ADG57592.1| RNA-dependent RNA polymerase
            6 [Gossypium hirsutum]
          Length = 1196

 Score =  437 bits (1125), Expect = e-120
 Identities = 212/300 (70%), Positives = 250/300 (83%)
 Frame = -2

Query: 902  FKRVNGLLKQGFELCGRMYTFLAFSSNQLRDRSAWFFAEDKRNRRLTVKEIRNWMGKFTN 723
            FKRV  +L  GF LCGR Y+FLAFS+NQLRDR+AWFFAED +   + V +I  WMGKFTN
Sbjct: 487  FKRVKSILTDGFYLCGRKYSFLAFSANQLRDRAAWFFAEDGK---INVLQIIGWMGKFTN 543

Query: 722  KNIAKCAARMGQCFSSTYATVEVSLDQVDSDLPDIKRNDYNFSDGIGIITPDLALEVAEK 543
            +NIAKCAARMGQCFSSTYATVEV   QV+  LPDIKRN Y+FSDGIG ITPDLA+EVA+K
Sbjct: 544  RNIAKCAARMGQCFSSTYATVEVPSGQVNMHLPDIKRNGYDFSDGIGKITPDLAMEVAQK 603

Query: 542  LQLQDSPPSAYQIRFGGCKGVVACWPAKDNKIKLHLRESMNKFISTHSVVEVCSWTRLQP 363
            L+L  +PP AYQIR+ GCKGVVACWP + ++I+L LR SM KF S H+ +E+CSWTR QP
Sbjct: 604  LKLDLNPPCAYQIRYAGCKGVVACWPEEGDRIRLSLRSSMIKFFSHHTTLEICSWTRFQP 663

Query: 362  GFLNRQIVTLLSALEVSDEVFWTMQVSMVSKLDQMLVNNEVAFDVLTASCAEQGNTAAIM 183
            GFLNRQI+TLLS L V DEVFW MQ SMVSKLD++LV+ + AF+V+ +SC EQG+T AIM
Sbjct: 664  GFLNRQIITLLSTLGVPDEVFWGMQNSMVSKLDKVLVDTDAAFEVVISSCGEQGHTPAIM 723

Query: 182  LSAGFQPQTEPHLRRMLSCIRAAQLGDLREKARIFVESGRWLMGCLDEIGVLEHGQCFIQ 3
            LSAGF+PQTEPHLR ML+C+RA+QL  LREK+RIF+ SGRWLMG LDE+GVLE GQCFIQ
Sbjct: 724  LSAGFKPQTEPHLRGMLTCVRASQLWGLREKSRIFIHSGRWLMGVLDELGVLEQGQCFIQ 783


>ref|XP_003603409.1| Rna-dependent RNA polymerase [Medicago truncatula]
            gi|355492457|gb|AES73660.1| Rna-dependent RNA polymerase
            [Medicago truncatula]
          Length = 1188

 Score =  437 bits (1124), Expect = e-120
 Identities = 215/300 (71%), Positives = 250/300 (83%)
 Frame = -2

Query: 902  FKRVNGLLKQGFELCGRMYTFLAFSSNQLRDRSAWFFAEDKRNRRLTVKEIRNWMGKFTN 723
            +KRV  +L  GF  CGR Y+FLAFSSNQLRDRSAWFFAEDK    +T  +IRNWMG+F  
Sbjct: 475  YKRVKTILDDGFYFCGRKYSFLAFSSNQLRDRSAWFFAEDKD---ITCDDIRNWMGRFNQ 531

Query: 722  KNIAKCAARMGQCFSSTYATVEVSLDQVDSDLPDIKRNDYNFSDGIGIITPDLALEVAEK 543
            KN+AKCAARMGQCFSSTYA+VEV  ++V+S LPD++RN+Y FSDGIGIIT DLA+EVAEK
Sbjct: 532  KNVAKCAARMGQCFSSTYASVEVPANEVNSMLPDVERNNYVFSDGIGIITTDLAVEVAEK 591

Query: 542  LQLQDSPPSAYQIRFGGCKGVVACWPAKDNKIKLHLRESMNKFISTHSVVEVCSWTRLQP 363
            L+L D  PSAYQIR+ G KGVVACWPAK + IKL LR SMNKF STH+ +E+C+WTR QP
Sbjct: 592  LKL-DKAPSAYQIRYAGFKGVVACWPAKGDGIKLSLRPSMNKFQSTHTTLEICAWTRFQP 650

Query: 362  GFLNRQIVTLLSALEVSDEVFWTMQVSMVSKLDQMLVNNEVAFDVLTASCAEQGNTAAIM 183
            GFLNRQI+TLLSAL+V DE+FW MQ  M+S L+QMLV+ +VA+DVLT SCAE GN AAIM
Sbjct: 651  GFLNRQIITLLSALDVPDEIFWKMQEGMISSLNQMLVDRDVAYDVLTKSCAEHGNAAAIM 710

Query: 182  LSAGFQPQTEPHLRRMLSCIRAAQLGDLREKARIFVESGRWLMGCLDEIGVLEHGQCFIQ 3
            LS GF P+TEPHLR ML+ IRAAQL  LREK+RIFV SGRWLMG LDE+GVLE GQCF+Q
Sbjct: 711  LSCGFSPKTEPHLRGMLNSIRAAQLWGLREKSRIFVSSGRWLMGVLDELGVLEQGQCFVQ 770