BLASTX nr result

ID: Achyranthes23_contig00004793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00004793
         (487 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301408.2| splicing factor-related family protein [Popu...    45   4e-06
ref|XP_006375364.1| hypothetical protein POPTR_0014s09370g [Popu...    45   5e-06
ref|XP_002320198.2| splicing factor-related family protein [Popu...    45   5e-06

>ref|XP_002301408.2| splicing factor-related family protein [Populus trichocarpa]
           gi|550345195|gb|EEE80681.2| splicing factor-related
           family protein [Populus trichocarpa]
          Length = 430

 Score = 45.4 bits (106), Expect(2) = 4e-06
 Identities = 21/34 (61%), Positives = 27/34 (79%)
 Frame = +2

Query: 347 SPFSTIYLNFSLVGGEGDFGSLLRSASMKAGQKE 448
           +P ST+YL   L+GG+G FGSLLR A+ KAGQK+
Sbjct: 91  TPESTVYLLLRLLGGKGGFGSLLRGAATKAGQKK 124



 Score = 30.8 bits (68), Expect(2) = 4e-06
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +3

Query: 450 TNNFDACRDMSG 485
           TNNFDACRDMSG
Sbjct: 125 TNNFDACRDMSG 136


>ref|XP_006375364.1| hypothetical protein POPTR_0014s09370g [Populus trichocarpa]
           gi|550323827|gb|ERP53161.1| hypothetical protein
           POPTR_0014s09370g [Populus trichocarpa]
          Length = 467

 Score = 45.1 bits (105), Expect(2) = 5e-06
 Identities = 21/33 (63%), Positives = 26/33 (78%)
 Frame = +2

Query: 350 PFSTIYLNFSLVGGEGDFGSLLRSASMKAGQKE 448
           P ST+YL   L+GG+G FGSLLR A+ KAGQK+
Sbjct: 83  PESTVYLLLRLLGGKGGFGSLLRGAATKAGQKK 115



 Score = 30.8 bits (68), Expect(2) = 5e-06
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +3

Query: 450 TNNFDACRDMSG 485
           TNNFDACRDMSG
Sbjct: 116 TNNFDACRDMSG 127


>ref|XP_002320198.2| splicing factor-related family protein [Populus trichocarpa]
           gi|550323826|gb|EEE98513.2| splicing factor-related
           family protein [Populus trichocarpa]
          Length = 381

 Score = 45.1 bits (105), Expect(2) = 5e-06
 Identities = 21/33 (63%), Positives = 26/33 (78%)
 Frame = +2

Query: 350 PFSTIYLNFSLVGGEGDFGSLLRSASMKAGQKE 448
           P ST+YL   L+GG+G FGSLLR A+ KAGQK+
Sbjct: 83  PESTVYLLLRLLGGKGGFGSLLRGAATKAGQKK 115



 Score = 30.8 bits (68), Expect(2) = 5e-06
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +3

Query: 450 TNNFDACRDMSG 485
           TNNFDACRDMSG
Sbjct: 116 TNNFDACRDMSG 127


Top