BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00004229
         (1765 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD20831.2| sigma factor [Spinacia oleracea]                      620   e-175
gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]     570   e-160
ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-...   563   e-158
ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-...   563   e-158
gb|EOY10370.1| RNApolymerase sigma subunit 2 [Theobroma cacao]        562   e-157
ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citr...   559   e-156
ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ...   556   e-155
emb|CBI40014.3| unnamed protein product [Vitis vinifera]              556   e-155
ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-...   556   e-155
ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-...   555   e-155
ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-...   553   e-154
ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-...   552   e-154
ref|XP_006878613.1| hypothetical protein AMTR_s00011p00258380 [A...   550   e-154
ref|XP_006577887.1| PREDICTED: RNA polymerase sigma factor sigB-...   542   e-151
ref|XP_002319746.2| SIGMA FACTOR B family protein [Populus trich...   541   e-151
ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-...   541   e-151
gb|EMJ05079.1| hypothetical protein PRUPE_ppa006657mg [Prunus pe...   541   e-151
gb|ESW16271.1| hypothetical protein PHAVU_007G142900g [Phaseolus...   536   e-149
ref|XP_006417677.1| hypothetical protein EUTSA_v10007187mg [Eutr...   534   e-149
ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Caps...   533   e-149

>emb|CAD20831.2| sigma factor [Spinacia oleracea]
          Length = 575

 Score =  620 bits (1600), Expect = e-175
 Identities = 322/435 (74%), Positives = 365/435 (83%)
 Frame = -3

Query: 1715 SSQSTKPVSQCEGQSLDSNGARLLEGGQLGTQRYLESAGTSVRKGYQTLNPVSESDDMEP 1536
            +SQ TKPVS+ EGQSL  +GA+LLE  Q+G+ R  E +  S+R+G    + VSE  DMEP
Sbjct: 144  NSQPTKPVSKLEGQSLHFSGAQLLENEQVGSMRNFEGSENSLREG----DTVSEPADMEP 199

Query: 1535 TKDXXXXXXXXXXESIAVRSTRQGXXXXXXXXXXXXXAPNVVPVKLRSNSRRKRTAVQDV 1356
            T +          ESI VRSTRQG             A NVV VK+ SNSR+KRT+VQ+V
Sbjct: 200  TIEELQLLEVELDESITVRSTRQGERKARRARAAEKVASNVVSVKVGSNSRKKRTSVQEV 259

Query: 1355 DYSDPLRYLRGTTSSSRILTASEELEFSAGIQDLLKLENLHDELQEKSGGEPSFAQWAAA 1176
            DYSDPLRYLRG T+SSR+LT+SEE E SAGIQDLLKLE LHDEL+ + G  PSF QWAAA
Sbjct: 260  DYSDPLRYLRGATNSSRLLTSSEETELSAGIQDLLKLEKLHDELKVRFGKSPSFVQWAAA 319

Query: 1175 AGVDQRALRKRLNHGVMCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVKGAE 996
            AG+DQR LR+RLNHG  CKDKMIKSN+RLVISIAKNYQG GMNLQDLVQEGCRGLV+GAE
Sbjct: 320  AGIDQRTLRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQEGCRGLVRGAE 379

Query: 995  KFDATKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYKVKEARKQLYTKNGRQ 816
            KFDA+KGFKFSTYAHWWIKQAVRK LSDQSRTIRLPFHMVEATY+VKEARKQL ++NG+Q
Sbjct: 380  KFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGKQ 439

Query: 815  PDNEEVAEATGLSMKRLNAVLMTPKPPRSLDQKIGTDMNLKPSEVIADPEAETSEDLVTK 636
            P+NEEVAEATGLSMKRL AVLMTPK PRSLDQKIG +MNLKPSEVIADPEAET+EDL+TK
Sbjct: 440  PNNEEVAEATGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLKPSEVIADPEAETAEDLLTK 499

Query: 635  QFLKQDIDKVLDTLTLREKQVIRWRYGLEDGRMKTLQEIGALMGVSRERIRQIELSAFRK 456
            QF++QD++KVLDTL+ REKQVIRWR+GLEDGRMKTLQEIG LMGVSRERIRQIE SAFRK
Sbjct: 500  QFMRQDLEKVLDTLSSREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRK 559

Query: 455  LQSKKRTKYLEEYMF 411
            LQ+KK+T  L++YMF
Sbjct: 560  LQNKKKTINLQQYMF 574


>gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 574

 Score =  570 bits (1468), Expect = e-160
 Identities = 291/432 (67%), Positives = 353/432 (81%), Gaps = 1/432 (0%)
 Frame = -3

Query: 1700 KPVSQCEGQSLDSNGARLLEGGQLGTQ-RYLESAGTSVRKGYQTLNPVSESDDMEPTKDX 1524
            +P ++ E  SL S+ AR ++  Q  ++ R    A  ++ + +   +   ES+D++PT + 
Sbjct: 142  RPSTRAESISLVSSEARNIKTAQAASRVRDSLRAEMALIEDHPPKDAAKESNDLQPTNEE 201

Query: 1523 XXXXXXXXXESIAVRSTRQGXXXXXXXXXXXXXAPNVVPVKLRSNSRRKRTAVQDVDYSD 1344
                     +SIAVRS RQ              A NVV VK  SNSR+KR +VQDVD+SD
Sbjct: 202  LRILQEQLSKSIAVRSRRQSERKAKRDRAAEKAAANVVAVKSGSNSRKKRASVQDVDHSD 261

Query: 1343 PLRYLRGTTSSSRILTASEELEFSAGIQDLLKLENLHDELQEKSGGEPSFAQWAAAAGVD 1164
            PLRYLR TTS+SR+LTA+EE+E S GIQDLLKLE L +EL E+ GG P+FAQWAAAAGVD
Sbjct: 262  PLRYLRSTTSTSRLLTATEEIELSEGIQDLLKLEKLQEELAERCGGPPTFAQWAAAAGVD 321

Query: 1163 QRALRKRLNHGVMCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVKGAEKFDA 984
            Q+ LR+R+N+G++CKDKMIKSN+RLVISIAKNYQG GMNLQDLVQEGCRGLV+GAEKFDA
Sbjct: 322  QKTLRRRINYGILCKDKMIKSNVRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA 381

Query: 983  TKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYKVKEARKQLYTKNGRQPDNE 804
            +KGFKFSTYAHWWIKQAVRK LSDQSRTIRLPFHMVEATY+VKEARKQLY++NGRQP++E
Sbjct: 382  SKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPNDE 441

Query: 803  EVAEATGLSMKRLNAVLMTPKPPRSLDQKIGTDMNLKPSEVIADPEAETSEDLVTKQFLK 624
            EVAEATGLSMKRL AVL+TPK PRSL+QKIG + NLKPSE+IADP+AET ED++T+QF+K
Sbjct: 442  EVAEATGLSMKRLAAVLLTPKAPRSLEQKIGINQNLKPSEIIADPDAETLEDVLTRQFMK 501

Query: 623  QDIDKVLDTLTLREKQVIRWRYGLEDGRMKTLQEIGALMGVSRERIRQIELSAFRKLQSK 444
            QD+DKVLD+L  REKQVIRWR+G++DGRMKTLQEIG LMGVSRERIRQIE  AFRKL++K
Sbjct: 502  QDLDKVLDSLNQREKQVIRWRFGMDDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNK 561

Query: 443  KRTKYLEEYMFS 408
            KRTK+L++Y+ S
Sbjct: 562  KRTKHLQQYLIS 573


>ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X2 [Citrus
            sinensis]
          Length = 525

 Score =  563 bits (1451), Expect = e-158
 Identities = 285/388 (73%), Positives = 328/388 (84%)
 Frame = -3

Query: 1580 YQTLNPVSESDDMEPTKDXXXXXXXXXXESIAVRSTRQGXXXXXXXXXXXXXAPNVVPVK 1401
            Y    P+++S D+EPT +          +SIAVRS RQ              A NV+ VK
Sbjct: 134  YSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRTRAAEKAAANVMSVK 193

Query: 1400 LRSNSRRKRTAVQDVDYSDPLRYLRGTTSSSRILTASEELEFSAGIQDLLKLENLHDELQ 1221
              S SRRKR +VQ+VDYSDPLRYLR TTSSSR+LTA+EE++ SAGIQDLLKLE L + L 
Sbjct: 194  SGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGIQDLLKLEGLREVLS 253

Query: 1220 EKSGGEPSFAQWAAAAGVDQRALRKRLNHGVMCKDKMIKSNIRLVISIAKNYQGVGMNLQ 1041
            E+ GG P+FAQWAAAAGVDQR LR+RLN+G++CKDKMI SNIRLVISIAKNYQG GMNLQ
Sbjct: 254  ERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVISIAKNYQGAGMNLQ 313

Query: 1040 DLVQEGCRGLVKGAEKFDATKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYK 861
            DLVQEGCRGLV+GAEKFDA+KGFKFSTYAHWWIKQAVRK LSDQSRTIRLPFHMVEATY+
Sbjct: 314  DLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYR 373

Query: 860  VKEARKQLYTKNGRQPDNEEVAEATGLSMKRLNAVLMTPKPPRSLDQKIGTDMNLKPSEV 681
            VKEARKQLY++NGR P+NEEVAEATGLSMKRL+AVL+TPK PRSLDQK G + NLKPSEV
Sbjct: 374  VKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLTPKAPRSLDQKFGINQNLKPSEV 433

Query: 680  IADPEAETSEDLVTKQFLKQDIDKVLDTLTLREKQVIRWRYGLEDGRMKTLQEIGALMGV 501
            IADPEAET+EDL+ K+F+K+D++KVLDTL  RE+QV+RWR+GLEDGRMKTLQEIG LMGV
Sbjct: 434  IADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGLEDGRMKTLQEIGELMGV 493

Query: 500  SRERIRQIELSAFRKLQSKKRTKYLEEY 417
            SRERIRQIE SAFRKL++KKRTK+L +Y
Sbjct: 494  SRERIRQIESSAFRKLKNKKRTKHLMQY 521


>ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Citrus
            sinensis]
          Length = 605

 Score =  563 bits (1451), Expect = e-158
 Identities = 285/388 (73%), Positives = 328/388 (84%)
 Frame = -3

Query: 1580 YQTLNPVSESDDMEPTKDXXXXXXXXXXESIAVRSTRQGXXXXXXXXXXXXXAPNVVPVK 1401
            Y    P+++S D+EPT +          +SIAVRS RQ              A NV+ VK
Sbjct: 214  YSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRTRAAEKAAANVMSVK 273

Query: 1400 LRSNSRRKRTAVQDVDYSDPLRYLRGTTSSSRILTASEELEFSAGIQDLLKLENLHDELQ 1221
              S SRRKR +VQ+VDYSDPLRYLR TTSSSR+LTA+EE++ SAGIQDLLKLE L + L 
Sbjct: 274  SGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGIQDLLKLEGLREVLS 333

Query: 1220 EKSGGEPSFAQWAAAAGVDQRALRKRLNHGVMCKDKMIKSNIRLVISIAKNYQGVGMNLQ 1041
            E+ GG P+FAQWAAAAGVDQR LR+RLN+G++CKDKMI SNIRLVISIAKNYQG GMNLQ
Sbjct: 334  ERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVISIAKNYQGAGMNLQ 393

Query: 1040 DLVQEGCRGLVKGAEKFDATKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYK 861
            DLVQEGCRGLV+GAEKFDA+KGFKFSTYAHWWIKQAVRK LSDQSRTIRLPFHMVEATY+
Sbjct: 394  DLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYR 453

Query: 860  VKEARKQLYTKNGRQPDNEEVAEATGLSMKRLNAVLMTPKPPRSLDQKIGTDMNLKPSEV 681
            VKEARKQLY++NGR P+NEEVAEATGLSMKRL+AVL+TPK PRSLDQK G + NLKPSEV
Sbjct: 454  VKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLTPKAPRSLDQKFGINQNLKPSEV 513

Query: 680  IADPEAETSEDLVTKQFLKQDIDKVLDTLTLREKQVIRWRYGLEDGRMKTLQEIGALMGV 501
            IADPEAET+EDL+ K+F+K+D++KVLDTL  RE+QV+RWR+GLEDGRMKTLQEIG LMGV
Sbjct: 514  IADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGLEDGRMKTLQEIGELMGV 573

Query: 500  SRERIRQIELSAFRKLQSKKRTKYLEEY 417
            SRERIRQIE SAFRKL++KKRTK+L +Y
Sbjct: 574  SRERIRQIESSAFRKLKNKKRTKHLMQY 601


>gb|EOY10370.1| RNApolymerase sigma subunit 2 [Theobroma cacao]
          Length = 623

 Score =  562 bits (1449), Expect = e-157
 Identities = 287/395 (72%), Positives = 330/395 (83%), Gaps = 8/395 (2%)
 Frame = -3

Query: 1568 NPVSESDDMEPTKDXXXXXXXXXXESIAVRSTRQGXXXXXXXXXXXXXAPNVVPVKLRSN 1389
            N  +ESD++EPT +           SIAVRS RQ              A NVV VK  S 
Sbjct: 226  NSTTESDELEPTNEELEHLEEQLSRSIAVRSRRQTERKAKRTRAAEKAAANVVSVKSGST 285

Query: 1388 SRRKRTAVQDVDYSDPLRYLRGTTSSSRILTASEELEFSAGIQDLLKLENLHDELQEKSG 1209
            +R++R A+QDVDYSDPLRYLRGTTS+SR+LTA+EELE S GIQDLLKLE L +EL E+ G
Sbjct: 286  NRKRRGALQDVDYSDPLRYLRGTTSTSRLLTANEELELSEGIQDLLKLERLQEELAERCG 345

Query: 1208 GEPSFAQWAAAAGVDQRALRKRLNHGVMCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQ 1029
            G+P+FAQWAAAAGVDQ+ LR RLN+GV CKDKMIKSNIRLVISIAKNYQG GMNLQDLVQ
Sbjct: 346  GQPTFAQWAAAAGVDQKTLRSRLNYGVHCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQ 405

Query: 1028 EGCRGLVKGAEKFDATKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYKVKEA 849
            EGCRGLV+GAEKFDA+KGFKFSTYAHWWIKQAVRK LSDQSRTIRLPFHMVEATY+VKEA
Sbjct: 406  EGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA 465

Query: 848  RKQLYTKNGRQPDNEEVAEATGLSMKRLNAVLMTPKPPRSLDQKIGTDMNLKPS------ 687
            RKQLY++NGR PDNEEVAEATGLSMKRL AVL+TPK PRSLDQKIG + NLKPS      
Sbjct: 466  RKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSVCPVSS 525

Query: 686  --EVIADPEAETSEDLVTKQFLKQDIDKVLDTLTLREKQVIRWRYGLEDGRMKTLQEIGA 513
              EVIADPEAET+ED++ KQF+++D++KVLD+L+ RE+QVIRWR+G+EDGRMKTLQEIG 
Sbjct: 526  LAEVIADPEAETAEDMLIKQFMRKDLEKVLDSLSQRERQVIRWRFGMEDGRMKTLQEIGE 585

Query: 512  LMGVSRERIRQIELSAFRKLQSKKRTKYLEEYMFS 408
            LMGVSRERIRQIE  AFRKL++KKRTK+L++Y+ S
Sbjct: 586  LMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLLS 620


>ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citrus clementina]
            gi|557539534|gb|ESR50578.1| hypothetical protein
            CICLE_v10030998mg [Citrus clementina]
          Length = 605

 Score =  559 bits (1440), Expect = e-156
 Identities = 291/432 (67%), Positives = 344/432 (79%), Gaps = 3/432 (0%)
 Frame = -3

Query: 1703 TKPVSQCEGQSLDSNGARLLEGGQ---LGTQRYLESAGTSVRKGYQTLNPVSESDDMEPT 1533
            +KP       +  S  A+L E  +   +G    +E+A     + Y    P+++S D+EPT
Sbjct: 173  SKPAISLSADTSTSMWAQLTERERASIIGDSVIVEAAP---EEEYSEQQPLNKSADLEPT 229

Query: 1532 KDXXXXXXXXXXESIAVRSTRQGXXXXXXXXXXXXXAPNVVPVKLRSNSRRKRTAVQDVD 1353
             +          +SIAVRS RQ              A NV+ VK  S +RRKR +VQ+VD
Sbjct: 230  HEELKLLEEQVSQSIAVRSRRQTERKARRTRAAEKAAANVMSVKSGSTTRRKRPSVQEVD 289

Query: 1352 YSDPLRYLRGTTSSSRILTASEELEFSAGIQDLLKLENLHDELQEKSGGEPSFAQWAAAA 1173
            YSDPLRYLR TTSSSR+LTA+EE++ SAGIQDLLKLE L + L E+ GG P+FAQWAAAA
Sbjct: 290  YSDPLRYLRATTSSSRLLTANEEMQLSAGIQDLLKLEGLREVLSERCGGSPTFAQWAAAA 349

Query: 1172 GVDQRALRKRLNHGVMCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVKGAEK 993
            GVDQR LR+RLN+G++CKDKMI SNIRLVISIAKNYQG GMNLQDLVQEGCRGLV+GAEK
Sbjct: 350  GVDQRELRRRLNYGILCKDKMITSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEK 409

Query: 992  FDATKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYKVKEARKQLYTKNGRQP 813
            FDA+KGFKFSTYAHWWIKQAVRK LSDQSRTIRLPFHMVEATY+VKEARKQLY++NGR P
Sbjct: 410  FDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHP 469

Query: 812  DNEEVAEATGLSMKRLNAVLMTPKPPRSLDQKIGTDMNLKPSEVIADPEAETSEDLVTKQ 633
            +NEEVA+ATGLSMKRL+AVL+ PK PRSLDQK G + NLKPSEVIADPEAET+EDL+ K+
Sbjct: 470  NNEEVAKATGLSMKRLHAVLLAPKAPRSLDQKFGINQNLKPSEVIADPEAETAEDLLIKK 529

Query: 632  FLKQDIDKVLDTLTLREKQVIRWRYGLEDGRMKTLQEIGALMGVSRERIRQIELSAFRKL 453
            F+K+D++KVLDTL  RE+QV+RWR+GLEDGRMKTLQEIG LMGVSRERIRQIE SAFRKL
Sbjct: 530  FMKEDLEKVLDTLNPRERQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKL 589

Query: 452  QSKKRTKYLEEY 417
            ++KKRTK+L +Y
Sbjct: 590  KNKKRTKHLMQY 601


>ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
            gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor
            rpoD1, putative [Ricinus communis]
          Length = 569

 Score =  556 bits (1433), Expect = e-155
 Identities = 286/397 (72%), Positives = 330/397 (83%)
 Frame = -3

Query: 1598 TSVRKGYQTLNPVSESDDMEPTKDXXXXXXXXXXESIAVRSTRQGXXXXXXXXXXXXXAP 1419
            T  R+     + + ESD +E T            E IAVRS RQ              A 
Sbjct: 173  TGPREESSMQSSIKESDYLELTHKELELLQKQLSEGIAVRSRRQTERKARRARAVEKAAS 232

Query: 1418 NVVPVKLRSNSRRKRTAVQDVDYSDPLRYLRGTTSSSRILTASEELEFSAGIQDLLKLEN 1239
            +VV VK  S S++KR ++Q+VDYSDPLRYLRGTTS+SR+LTASEELE SA IQDLLKLE 
Sbjct: 233  SVVSVKPGSTSKKKRGSLQEVDYSDPLRYLRGTTSTSRLLTASEELELSAAIQDLLKLER 292

Query: 1238 LHDELQEKSGGEPSFAQWAAAAGVDQRALRKRLNHGVMCKDKMIKSNIRLVISIAKNYQG 1059
            L +EL E+ GG+P+FAQWAAAAGVDQR LRKR+NHG +CKDKMIKSNIRLVISIAKNYQG
Sbjct: 293  LQEELAERYGGQPTFAQWAAAAGVDQRTLRKRINHGTICKDKMIKSNIRLVISIAKNYQG 352

Query: 1058 VGMNLQDLVQEGCRGLVKGAEKFDATKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHM 879
             GMNLQDLVQEGCRGLV+GAEKFDA+KGFKFSTYAHWWIKQAVRK LSDQSRTIRLPFHM
Sbjct: 353  AGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHM 412

Query: 878  VEATYKVKEARKQLYTKNGRQPDNEEVAEATGLSMKRLNAVLMTPKPPRSLDQKIGTDMN 699
            VEATY+VKEARKQLY++NGR PD+EEVAEA GLSMKRL+AVL+TPK PRSLDQKIG +M+
Sbjct: 413  VEATYRVKEARKQLYSENGRHPDDEEVAEAAGLSMKRLSAVLLTPKAPRSLDQKIGMNMD 472

Query: 698  LKPSEVIADPEAETSEDLVTKQFLKQDIDKVLDTLTLREKQVIRWRYGLEDGRMKTLQEI 519
            LKPSEVIADPEAET+E+L+ KQF+KQD++KVL+TL  RE QV+RWR+GLEDGRMKTLQEI
Sbjct: 473  LKPSEVIADPEAETAEELLMKQFMKQDLEKVLNTLNPRETQVVRWRFGLEDGRMKTLQEI 532

Query: 518  GALMGVSRERIRQIELSAFRKLQSKKRTKYLEEYMFS 408
            G +MGVSRERIRQIE SAFRKL++KKRTK L++Y+ +
Sbjct: 533  GEIMGVSRERIRQIESSAFRKLKNKKRTKQLKQYLLA 569


>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
          Length = 575

 Score =  556 bits (1432), Expect = e-155
 Identities = 281/392 (71%), Positives = 331/392 (84%), Gaps = 1/392 (0%)
 Frame = -3

Query: 1580 YQTLNPVSE-SDDMEPTKDXXXXXXXXXXESIAVRSTRQGXXXXXXXXXXXXXAPNVVPV 1404
            Y +L  V+E SDD+EPT +          +SI VRS RQ              +  VV V
Sbjct: 184  YNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRARAAEKASAGVVSV 243

Query: 1403 KLRSNSRRKRTAVQDVDYSDPLRYLRGTTSSSRILTASEELEFSAGIQDLLKLENLHDEL 1224
            +  S SRRKR ++Q+VDYSDPLRYLRGTTS+SR+LTA+EELE S GIQDLLKLE L ++L
Sbjct: 244  RSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLQEDL 303

Query: 1223 QEKSGGEPSFAQWAAAAGVDQRALRKRLNHGVMCKDKMIKSNIRLVISIAKNYQGVGMNL 1044
            +E+ G +P+FAQWAAAAGVDQ+ LR+R N+G+ CKDKMIKSNIRLVISIAKNYQG GMN+
Sbjct: 304  EERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNI 363

Query: 1043 QDLVQEGCRGLVKGAEKFDATKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATY 864
            QDLVQEGCRGLV+GAEKFDA+KGFKFSTYAHWWIKQAVRK LSDQSRTIRLPFHMVEATY
Sbjct: 364  QDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATY 423

Query: 863  KVKEARKQLYTKNGRQPDNEEVAEATGLSMKRLNAVLMTPKPPRSLDQKIGTDMNLKPSE 684
            +VKEARKQLY++NGR P+NEEVAEATGLSMKRLNAVL+TPK PRSLDQKIG + NLKPSE
Sbjct: 424  RVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSE 483

Query: 683  VIADPEAETSEDLVTKQFLKQDIDKVLDTLTLREKQVIRWRYGLEDGRMKTLQEIGALMG 504
            VIADP+AET+E+L+ KQF+++D++KVL++L  REKQVIRWRYGLEDGR KTLQEIG LMG
Sbjct: 484  VIADPDAETAEELLIKQFMREDLEKVLNSLNPREKQVIRWRYGLEDGRTKTLQEIGELMG 543

Query: 503  VSRERIRQIELSAFRKLQSKKRTKYLEEYMFS 408
            VSRERIRQIE  AFRKL++K+RTK+L++Y+ S
Sbjct: 544  VSRERIRQIESCAFRKLKNKRRTKHLQQYLVS 575


>ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 578

 Score =  556 bits (1432), Expect = e-155
 Identities = 281/392 (71%), Positives = 331/392 (84%), Gaps = 1/392 (0%)
 Frame = -3

Query: 1580 YQTLNPVSE-SDDMEPTKDXXXXXXXXXXESIAVRSTRQGXXXXXXXXXXXXXAPNVVPV 1404
            Y +L  V+E SDD+EPT +          +SI VRS RQ              +  VV V
Sbjct: 187  YNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRARAAEKASAGVVSV 246

Query: 1403 KLRSNSRRKRTAVQDVDYSDPLRYLRGTTSSSRILTASEELEFSAGIQDLLKLENLHDEL 1224
            +  S SRRKR ++Q+VDYSDPLRYLRGTTS+SR+LTA+EELE S GIQDLLKLE L ++L
Sbjct: 247  RSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLQEDL 306

Query: 1223 QEKSGGEPSFAQWAAAAGVDQRALRKRLNHGVMCKDKMIKSNIRLVISIAKNYQGVGMNL 1044
            +E+ G +P+FAQWAAAAGVDQ+ LR+R N+G+ CKDKMIKSNIRLVISIAKNYQG GMN+
Sbjct: 307  EERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNI 366

Query: 1043 QDLVQEGCRGLVKGAEKFDATKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATY 864
            QDLVQEGCRGLV+GAEKFDA+KGFKFSTYAHWWIKQAVRK LSDQSRTIRLPFHMVEATY
Sbjct: 367  QDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATY 426

Query: 863  KVKEARKQLYTKNGRQPDNEEVAEATGLSMKRLNAVLMTPKPPRSLDQKIGTDMNLKPSE 684
            +VKEARKQLY++NGR P+NEEVAEATGLSMKRLNAVL+TPK PRSLDQKIG + NLKPSE
Sbjct: 427  RVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSE 486

Query: 683  VIADPEAETSEDLVTKQFLKQDIDKVLDTLTLREKQVIRWRYGLEDGRMKTLQEIGALMG 504
            VIADP+AET+E+L+ KQF+++D++KVL++L  REKQVIRWRYGLEDGR KTLQEIG LMG
Sbjct: 487  VIADPDAETAEELLIKQFMREDLEKVLNSLNPREKQVIRWRYGLEDGRTKTLQEIGELMG 546

Query: 503  VSRERIRQIELSAFRKLQSKKRTKYLEEYMFS 408
            VSRERIRQIE  AFRKL++K+RTK+L++Y+ S
Sbjct: 547  VSRERIRQIESCAFRKLKNKRRTKHLQQYLVS 578


>ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum
            lycopersicum]
          Length = 613

 Score =  555 bits (1431), Expect = e-155
 Identities = 280/383 (73%), Positives = 324/383 (84%)
 Frame = -3

Query: 1562 VSESDDMEPTKDXXXXXXXXXXESIAVRSTRQGXXXXXXXXXXXXXAPNVVPVKLRSNSR 1383
            +++SDD+EP+ +            IAV+S RQ              A NVV VK  S SR
Sbjct: 229  LTDSDDLEPSHEELEILQSQLSNVIAVKSNRQTERKARRAKAVERAAANVVSVKSGSTSR 288

Query: 1382 RKRTAVQDVDYSDPLRYLRGTTSSSRILTASEELEFSAGIQDLLKLENLHDELQEKSGGE 1203
            +KR +VQDVDYSDPLRYLRGTT SSR+LTASEE E S GIQDLLKLE L  EL E+ GG+
Sbjct: 289  KKRASVQDVDYSDPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQ 348

Query: 1202 PSFAQWAAAAGVDQRALRKRLNHGVMCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEG 1023
            P+F QWAAAAGVDQ  LRKRLN+G++CKDKMIKSN+RLVISIAKNYQGVGMNLQDLVQEG
Sbjct: 349  PTFTQWAAAAGVDQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEG 408

Query: 1022 CRGLVKGAEKFDATKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYKVKEARK 843
            CRGLV+GAEKFDATKGFKFSTYAHWWIKQAVRK LSDQSRTIRLPFHMVEATY+VKEARK
Sbjct: 409  CRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARK 468

Query: 842  QLYTKNGRQPDNEEVAEATGLSMKRLNAVLMTPKPPRSLDQKIGTDMNLKPSEVIADPEA 663
            QL T+NGR P++ EVAEATGLSMKRL AV++TPK PRSLDQK+G + +LKPSEV+ADP+A
Sbjct: 469  QLLTENGRHPNDAEVAEATGLSMKRLAAVMLTPKAPRSLDQKVGFNESLKPSEVLADPDA 528

Query: 662  ETSEDLVTKQFLKQDIDKVLDTLTLREKQVIRWRYGLEDGRMKTLQEIGALMGVSRERIR 483
            ETSE+++TKQF++QD++KVLDTL  REKQV+RWR+GLEDGRMKTLQEIG LMGVSRERIR
Sbjct: 529  ETSEEILTKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIR 588

Query: 482  QIELSAFRKLQSKKRTKYLEEYM 414
            QIE  AFRKL++KKRTK+L++Y+
Sbjct: 589  QIESCAFRKLKNKKRTKFLQQYI 611


>ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum tuberosum]
          Length = 613

 Score =  553 bits (1424), Expect = e-154
 Identities = 280/383 (73%), Positives = 322/383 (84%)
 Frame = -3

Query: 1562 VSESDDMEPTKDXXXXXXXXXXESIAVRSTRQGXXXXXXXXXXXXXAPNVVPVKLRSNSR 1383
            +++SDD+EP+ +            IAV+S RQ              A NVV VK  S SR
Sbjct: 229  LTDSDDLEPSPEELEILQSQLSNVIAVKSNRQTERKAKRAKSVEKAAANVVTVKSGSTSR 288

Query: 1382 RKRTAVQDVDYSDPLRYLRGTTSSSRILTASEELEFSAGIQDLLKLENLHDELQEKSGGE 1203
            +KR +VQDVDYSDPLRYLRGTT SSR+LTASEE E S GIQDLLKLE L  EL E+ GG+
Sbjct: 289  KKRASVQDVDYSDPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQ 348

Query: 1202 PSFAQWAAAAGVDQRALRKRLNHGVMCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEG 1023
            P+F QWAAAAGVDQ  LRKRLN+G++CKDKMIKSN+RLVISIAKNYQGVGMNLQDLVQEG
Sbjct: 349  PTFTQWAAAAGVDQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEG 408

Query: 1022 CRGLVKGAEKFDATKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYKVKEARK 843
            CRGLV+GAEKFDATKGFKFSTYAHWWIKQAVRK LSDQSR IRLPFHMVEATY+VKEARK
Sbjct: 409  CRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARK 468

Query: 842  QLYTKNGRQPDNEEVAEATGLSMKRLNAVLMTPKPPRSLDQKIGTDMNLKPSEVIADPEA 663
            QL T+NGR P++ EVAEA GLSMKRL AV++TPK PRSLDQKIG + +LKPSEV+ADPEA
Sbjct: 469  QLLTENGRHPNDAEVAEAAGLSMKRLAAVMLTPKAPRSLDQKIGFNESLKPSEVLADPEA 528

Query: 662  ETSEDLVTKQFLKQDIDKVLDTLTLREKQVIRWRYGLEDGRMKTLQEIGALMGVSRERIR 483
            ETSE+++TKQF++QD++KVLDTL  REKQV+RWR+GLEDGRMKTLQEIG LMGVSRERIR
Sbjct: 529  ETSEEILTKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIR 588

Query: 482  QIELSAFRKLQSKKRTKYLEEYM 414
            QIE  AFRKL++KKRTK+L++Y+
Sbjct: 589  QIESCAFRKLKNKKRTKFLQQYI 611


>ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-like [Cucumis sativus]
            gi|449473951|ref|XP_004154029.1| PREDICTED: RNA
            polymerase sigma factor sigB-like [Cucumis sativus]
          Length = 580

 Score =  552 bits (1423), Expect = e-154
 Identities = 279/384 (72%), Positives = 323/384 (84%)
 Frame = -3

Query: 1559 SESDDMEPTKDXXXXXXXXXXESIAVRSTRQGXXXXXXXXXXXXXAPNVVPVKLRSNSRR 1380
            +ESDDMEPT +          ESI V+S RQ                +V+  K  S+SR+
Sbjct: 197  TESDDMEPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRK 256

Query: 1379 KRTAVQDVDYSDPLRYLRGTTSSSRILTASEELEFSAGIQDLLKLENLHDELQEKSGGEP 1200
            KR +VQ+VDYSDPLRYLR TT++SR+LTA+EELE S GIQDLLKLE L +EL E+ G EP
Sbjct: 257  KRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLKLERLQEELGERYGNEP 316

Query: 1199 SFAQWAAAAGVDQRALRKRLNHGVMCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGC 1020
            +FAQWAAAAGV+QR LRKRLN+G +CKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEGC
Sbjct: 317  TFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGC 376

Query: 1019 RGLVKGAEKFDATKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYKVKEARKQ 840
            RGLV+GAEKFDA+KGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATY+VKEARKQ
Sbjct: 377  RGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQ 436

Query: 839  LYTKNGRQPDNEEVAEATGLSMKRLNAVLMTPKPPRSLDQKIGTDMNLKPSEVIADPEAE 660
            L  +NGR PD++E+AEA GLSMKRL AVLMTPK PRSL+QKIG + NLKPSEVI+DPEAE
Sbjct: 437  LLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAE 496

Query: 659  TSEDLVTKQFLKQDIDKVLDTLTLREKQVIRWRYGLEDGRMKTLQEIGALMGVSRERIRQ 480
            T ED++ KQF+KQD++KVLD+L  REKQVIRWR+G+EDGRMKTLQEIG +MGVSRERIRQ
Sbjct: 497  TCEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQ 556

Query: 479  IELSAFRKLQSKKRTKYLEEYMFS 408
            IE  AFRKL++KKRTK+L++Y+ S
Sbjct: 557  IESCAFRKLKNKKRTKHLQQYVMS 580


>ref|XP_006878613.1| hypothetical protein AMTR_s00011p00258380 [Amborella trichopoda]
            gi|548831956|gb|ERM94758.1| hypothetical protein
            AMTR_s00011p00258380 [Amborella trichopoda]
          Length = 570

 Score =  550 bits (1418), Expect = e-154
 Identities = 282/427 (66%), Positives = 341/427 (79%), Gaps = 2/427 (0%)
 Frame = -3

Query: 1682 EGQSLDSNGARLLEGGQLGTQRYLESAGTSVRKGYQTLNPVSESD--DMEPTKDXXXXXX 1509
            E   L    ARL E  ++G+      AG   R  ++++N +S ++  D +  ++      
Sbjct: 143  EADILRLQRARLTEMERIGSMDGSSIAGIGPRDKHKSVNQLSPNEMADKQSRENILEALQ 202

Query: 1508 XXXXESIAVRSTRQGXXXXXXXXXXXXXAPNVVPVKLRSNSRRKRTAVQDVDYSDPLRYL 1329
                + +AVRS RQ              A N + VKL + SRRKR  +Q++DYSDPLRYL
Sbjct: 203  LQHSQRVAVRSRRQTERRARRAKGVEKAAANAITVKLGTTSRRKRAPLQEIDYSDPLRYL 262

Query: 1328 RGTTSSSRILTASEELEFSAGIQDLLKLENLHDELQEKSGGEPSFAQWAAAAGVDQRALR 1149
            RGTT+S+++LTA+EELE S GIQDLLKLE LH EL E+ GGEP+F QWAAAAG+DQ+ALR
Sbjct: 263  RGTTNSTKLLTATEELELSEGIQDLLKLEKLHKELTERFGGEPTFVQWAAAAGIDQKALR 322

Query: 1148 KRLNHGVMCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVKGAEKFDATKGFK 969
            +RL++G  CKDKMIKSNIRLVISIAKNYQGVG+++QDLVQEGCRGLV+GAEKFDA+KGFK
Sbjct: 323  RRLSYGTHCKDKMIKSNIRLVISIAKNYQGVGLSIQDLVQEGCRGLVRGAEKFDASKGFK 382

Query: 968  FSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYKVKEARKQLYTKNGRQPDNEEVAEA 789
            FSTYAHWWIKQAVRK LSDQSRTIRLPFHMV+ATY+V+EA KQLY++NGR P++EEVAEA
Sbjct: 383  FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVDATYRVREATKQLYSENGRHPNDEEVAEA 442

Query: 788  TGLSMKRLNAVLMTPKPPRSLDQKIGTDMNLKPSEVIADPEAETSEDLVTKQFLKQDIDK 609
            TGLSMKRL  VL+TPK PRSLDQKIG + NLKPSEVI+DPEAET+EDL+ KQF+KQD++K
Sbjct: 443  TGLSMKRLTTVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETAEDLLMKQFMKQDLEK 502

Query: 608  VLDTLTLREKQVIRWRYGLEDGRMKTLQEIGALMGVSRERIRQIELSAFRKLQSKKRTKY 429
            VL+TL  REKQV+RWR+GLEDGRMKTLQEIG LMGVSRERIRQIE SAFRKL++KKRTK 
Sbjct: 503  VLNTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKKRTKN 562

Query: 428  LEEYMFS 408
            L +Y+ S
Sbjct: 563  LRQYLLS 569


>ref|XP_006577887.1| PREDICTED: RNA polymerase sigma factor sigB-like [Glycine max]
          Length = 564

 Score =  542 bits (1396), Expect = e-151
 Identities = 270/399 (67%), Positives = 327/399 (81%)
 Frame = -3

Query: 1604 AGTSVRKGYQTLNPVSESDDMEPTKDXXXXXXXXXXESIAVRSTRQGXXXXXXXXXXXXX 1425
            AG  + +G   ++P  E  D+EP+ +          +SIAVRS RQ              
Sbjct: 167  AGAEIMEGVD-VSPSEEESDLEPSHEELERLQEQLSDSIAVRSRRQTERKAKRVRATEKA 225

Query: 1424 APNVVPVKLRSNSRRKRTAVQDVDYSDPLRYLRGTTSSSRILTASEELEFSAGIQDLLKL 1245
              N    K  S+SRRKR ++Q+VDYSDPLRYLR TTS+SR+LT +EE++ SAGIQDLLKL
Sbjct: 226  TTNFTSFKPGSSSRRKRVSMQEVDYSDPLRYLRTTTSASRLLTPTEEIKLSAGIQDLLKL 285

Query: 1244 ENLHDELQEKSGGEPSFAQWAAAAGVDQRALRKRLNHGVMCKDKMIKSNIRLVISIAKNY 1065
            E + ++L E+ G +P+FAQWAA AGVDQ+ LRKRLN+G+ CKDKMIKSNIRLVISIAKNY
Sbjct: 286  EKIQEDLAERFGSQPTFAQWAAVAGVDQKTLRKRLNYGIFCKDKMIKSNIRLVISIAKNY 345

Query: 1064 QGVGMNLQDLVQEGCRGLVKGAEKFDATKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPF 885
            QG GMNLQDLVQEGCRGLVKGAEKFD TKGFKFSTYAHWWIKQAVRK LSDQSRTIRLPF
Sbjct: 346  QGSGMNLQDLVQEGCRGLVKGAEKFDGTKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 405

Query: 884  HMVEATYKVKEARKQLYTKNGRQPDNEEVAEATGLSMKRLNAVLMTPKPPRSLDQKIGTD 705
            HMVEATY+VKEARKQLY++NGRQPD+EEVAEATGLSMKRLNAVLMTPK PRSL+QKIG +
Sbjct: 406  HMVEATYRVKEARKQLYSENGRQPDDEEVAEATGLSMKRLNAVLMTPKAPRSLEQKIGIN 465

Query: 704  MNLKPSEVIADPEAETSEDLVTKQFLKQDIDKVLDTLTLREKQVIRWRYGLEDGRMKTLQ 525
             NLKPSEVI+DP+AET+E+ + KQF+K+D+++ LD+L  RE+QV+RWR+G++DGR KTLQ
Sbjct: 466  QNLKPSEVISDPDAETAEEQLLKQFMKKDLEEALDSLNPRERQVVRWRFGMDDGRTKTLQ 525

Query: 524  EIGALMGVSRERIRQIELSAFRKLQSKKRTKYLEEYMFS 408
            EIG ++GVSRERIRQIE SAF+KL++KKRT +L++Y+ S
Sbjct: 526  EIGEMLGVSRERIRQIESSAFKKLKNKKRTNHLQQYLVS 564


>ref|XP_002319746.2| SIGMA FACTOR B family protein [Populus trichocarpa]
            gi|550325142|gb|EEE95669.2| SIGMA FACTOR B family protein
            [Populus trichocarpa]
          Length = 567

 Score =  541 bits (1395), Expect = e-151
 Identities = 275/398 (69%), Positives = 327/398 (82%)
 Frame = -3

Query: 1607 SAGTSVRKGYQTLNPVSESDDMEPTKDXXXXXXXXXXESIAVRSTRQGXXXXXXXXXXXX 1428
            SA T +R+ Y    P  E D +EPT++          E IAVRS RQ             
Sbjct: 168  SAETRLREEYSVQYPTEEYDCLEPTQEELALLQKQLSEGIAVRSKRQTERKARRARAAEK 227

Query: 1427 XAPNVVPVKLRSNSRRKRTAVQDVDYSDPLRYLRGTTSSSRILTASEELEFSAGIQDLLK 1248
             A NVV VK  S S++KR  +Q+VD SDPLR+ RG +SSSR+L+A+EE+E S GIQDLLK
Sbjct: 228  AAANVVSVKSGSTSKKKRVPLQEVDQSDPLRFFRGASSSSRLLSATEEVELSEGIQDLLK 287

Query: 1247 LENLHDELQEKSGGEPSFAQWAAAAGVDQRALRKRLNHGVMCKDKMIKSNIRLVISIAKN 1068
            LE + +EL+E+ GGEPSFAQWAAAAGVDQ  LRKRLN+G++CKDKMIKSN+RLVISIAKN
Sbjct: 288  LERIEEELKERFGGEPSFAQWAAAAGVDQLTLRKRLNYGILCKDKMIKSNVRLVISIAKN 347

Query: 1067 YQGVGMNLQDLVQEGCRGLVKGAEKFDATKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLP 888
            YQG GMNLQDLVQEGCRGLV+GAEKFDA+KGFKFSTYAHWWIKQAVRK LSD+SRTIRLP
Sbjct: 348  YQGTGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDRSRTIRLP 407

Query: 887  FHMVEATYKVKEARKQLYTKNGRQPDNEEVAEATGLSMKRLNAVLMTPKPPRSLDQKIGT 708
            FHMV+ATY+VKEARKQLY++NGR PD++EVAEA GLSMKRL+AVL+TPK PRSLDQK+G 
Sbjct: 408  FHMVDATYRVKEARKQLYSENGRHPDDKEVAEAAGLSMKRLSAVLLTPKAPRSLDQKMGF 467

Query: 707  DMNLKPSEVIADPEAETSEDLVTKQFLKQDIDKVLDTLTLREKQVIRWRYGLEDGRMKTL 528
            +M+LK SEV ADPEAET+EDL+ K+F+K+D+ KVL +L+ RE QV+RWR+G+EDGRMKTL
Sbjct: 468  NMDLKLSEVTADPEAETAEDLLMKEFMKKDLAKVLGSLSPRENQVVRWRFGMEDGRMKTL 527

Query: 527  QEIGALMGVSRERIRQIELSAFRKLQSKKRTKYLEEYM 414
            QEIG LMGVSRER+RQIELSAFRKL++K RTK L +YM
Sbjct: 528  QEIGELMGVSRERVRQIELSAFRKLKNKNRTKQLRQYM 565


>ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-like [Fragaria vesca
            subsp. vesca]
          Length = 616

 Score =  541 bits (1394), Expect = e-151
 Identities = 269/385 (69%), Positives = 325/385 (84%)
 Frame = -3

Query: 1562 VSESDDMEPTKDXXXXXXXXXXESIAVRSTRQGXXXXXXXXXXXXXAPNVVPVKLRSNSR 1383
            ++ES+++EP  +            IA RS+RQ              A ++V VK  S SR
Sbjct: 232  INESENVEPANEEFELLQEQLSNGIAARSSRQTERKARRTRAAEKAAASIVSVKSGSTSR 291

Query: 1382 RKRTAVQDVDYSDPLRYLRGTTSSSRILTASEELEFSAGIQDLLKLENLHDELQEKSGGE 1203
            +KR ++QDVD+SDPLRYLR TT +SR+LTA+EE+E S GIQ+LLKLE L ++L ++ G +
Sbjct: 292  KKRASLQDVDHSDPLRYLRATTHTSRLLTANEEIELSEGIQELLKLEKLQEDLAQRCGTQ 351

Query: 1202 PSFAQWAAAAGVDQRALRKRLNHGVMCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEG 1023
            P+FAQWAAAAGVDQ+ LRKR+N+G+MCKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEG
Sbjct: 352  PTFAQWAAAAGVDQKTLRKRVNYGIMCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEG 411

Query: 1022 CRGLVKGAEKFDATKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYKVKEARK 843
            CRGLV+GAEKFDA+KGFKFSTYAHWWIKQAVRK LSDQSRTIRLPFHMVEATY+V+EA+K
Sbjct: 412  CRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKK 471

Query: 842  QLYTKNGRQPDNEEVAEATGLSMKRLNAVLMTPKPPRSLDQKIGTDMNLKPSEVIADPEA 663
            QLY+ NGR P++EEVAEATGLSMKRL AVL+TPK PRSL+QKIG + NLKPS+VIADP+A
Sbjct: 472  QLYSVNGRHPNDEEVAEATGLSMKRLAAVLLTPKAPRSLEQKIGINQNLKPSDVIADPDA 531

Query: 662  ETSEDLVTKQFLKQDIDKVLDTLTLREKQVIRWRYGLEDGRMKTLQEIGALMGVSRERIR 483
            ET+EDL+ K+F+KQD++KVLD+L  REKQVIRWR+G+EDGRMKTLQEIG LMGVSRERIR
Sbjct: 532  ETAEDLLMKKFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGELMGVSRERIR 591

Query: 482  QIELSAFRKLQSKKRTKYLEEYMFS 408
            QIE  AFRKL++KKRTK+L++Y+ S
Sbjct: 592  QIESCAFRKLKNKKRTKHLQQYVLS 616


>gb|EMJ05079.1| hypothetical protein PRUPE_ppa006657mg [Prunus persica]
          Length = 401

 Score =  541 bits (1393), Expect = e-151
 Identities = 271/385 (70%), Positives = 323/385 (83%)
 Frame = -3

Query: 1562 VSESDDMEPTKDXXXXXXXXXXESIAVRSTRQGXXXXXXXXXXXXXAPNVVPVKLRSNSR 1383
            + ES+D+E T            E I  RS+RQ              A +VV VK  S SR
Sbjct: 17   IKESEDVESTNQEFELLREQLSEGITARSSRQIERKARRAKAAEKAAASVVSVKSGSTSR 76

Query: 1382 RKRTAVQDVDYSDPLRYLRGTTSSSRILTASEELEFSAGIQDLLKLENLHDELQEKSGGE 1203
            +KR ++QDVD+SDPLRYLR TT +SR+LTA+EE+E S GIQ+LLKLE L +EL ++ GG+
Sbjct: 77   KKRASLQDVDHSDPLRYLRATTHTSRLLTANEEIELSEGIQELLKLEKLQEELVQRCGGQ 136

Query: 1202 PSFAQWAAAAGVDQRALRKRLNHGVMCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEG 1023
            P+ AQWAAAAGVDQ+ LRKR+N+G++CKDKMIKSNIRLVISIAKNYQG GMNLQDLVQ+G
Sbjct: 137  PTIAQWAAAAGVDQKTLRKRINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQQG 196

Query: 1022 CRGLVKGAEKFDATKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYKVKEARK 843
            CRGLV+GAEKFDA+KGFKFSTYAHWWIKQAVRK LSDQSRTIRLPFHMVEATY+V+EA+K
Sbjct: 197  CRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKK 256

Query: 842  QLYTKNGRQPDNEEVAEATGLSMKRLNAVLMTPKPPRSLDQKIGTDMNLKPSEVIADPEA 663
            QLY+ NGR P++EEVAEATGLSMKRL AVL+TPK PRSL+QKIG + NLKPSEVIADPEA
Sbjct: 257  QLYSVNGRHPNDEEVAEATGLSMKRLAAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEA 316

Query: 662  ETSEDLVTKQFLKQDIDKVLDTLTLREKQVIRWRYGLEDGRMKTLQEIGALMGVSRERIR 483
            ET+ED++ K+F+KQD++KVLD+L  REKQV+RWR+GLEDGRMKTLQEIG LMGVSRERIR
Sbjct: 317  ETAEDMLMKKFMKQDLEKVLDSLNAREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIR 376

Query: 482  QIELSAFRKLQSKKRTKYLEEYMFS 408
            QIE  AFRKL++KKRTK+L++Y+ S
Sbjct: 377  QIESCAFRKLKNKKRTKHLQQYVVS 401


>gb|ESW16271.1| hypothetical protein PHAVU_007G142900g [Phaseolus vulgaris]
          Length = 1302

 Score =  536 bits (1381), Expect = e-149
 Identities = 266/397 (67%), Positives = 325/397 (81%)
 Frame = -3

Query: 1604 AGTSVRKGYQTLNPVSESDDMEPTKDXXXXXXXXXXESIAVRSTRQGXXXXXXXXXXXXX 1425
            AG  + +G   L+P  E  D+EP+ +            IAVRS RQ              
Sbjct: 905  AGAEMMEGVD-LSPSEEESDVEPSHEELESLQEQLSNCIAVRSRRQPERKAKRVRAAEKA 963

Query: 1424 APNVVPVKLRSNSRRKRTAVQDVDYSDPLRYLRGTTSSSRILTASEELEFSAGIQDLLKL 1245
            + NV   K  S+SR+KR ++Q+VDYSDPLRYLR TT++SR+LT++EE++ S GIQDLLKL
Sbjct: 964  STNVASFKPGSSSRKKRVSMQEVDYSDPLRYLRTTTTTSRLLTSTEEIKLSEGIQDLLKL 1023

Query: 1244 ENLHDELQEKSGGEPSFAQWAAAAGVDQRALRKRLNHGVMCKDKMIKSNIRLVISIAKNY 1065
            E + ++L E+ GG+P+FAQWAA AGVDQ+ LRKRL+HG  CKDKMIKSNIRLVISIAKNY
Sbjct: 1024 ERIQEDLVERCGGQPTFAQWAAVAGVDQKTLRKRLSHGRFCKDKMIKSNIRLVISIAKNY 1083

Query: 1064 QGVGMNLQDLVQEGCRGLVKGAEKFDATKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPF 885
            QG GMNLQDLVQEGCRGLVKGAEKFD TKGFKFSTYAHWWIKQAVRK LSDQSRTIRLPF
Sbjct: 1084 QGSGMNLQDLVQEGCRGLVKGAEKFDGTKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 1143

Query: 884  HMVEATYKVKEARKQLYTKNGRQPDNEEVAEATGLSMKRLNAVLMTPKPPRSLDQKIGTD 705
            HMVEATY+VKEARKQLY++NGRQPD+EEVAEA GLSMKRL AVL+TPK PRSL+QKIG +
Sbjct: 1144 HMVEATYRVKEARKQLYSENGRQPDDEEVAEAAGLSMKRLTAVLLTPKAPRSLEQKIGIN 1203

Query: 704  MNLKPSEVIADPEAETSEDLVTKQFLKQDIDKVLDTLTLREKQVIRWRYGLEDGRMKTLQ 525
             NLKPSE+I+DP+AET+E+ + KQF+K+D+ + LD+LTLRE+QV+RWR+G++DGR KTLQ
Sbjct: 1204 QNLKPSEIISDPDAETTEEQLLKQFMKKDLQEALDSLTLRERQVVRWRFGMDDGRTKTLQ 1263

Query: 524  EIGALMGVSRERIRQIELSAFRKLQSKKRTKYLEEYM 414
            +IG +MGVSRERIRQIE SAF+KL++KKRTK+ ++Y+
Sbjct: 1264 QIGEMMGVSRERIRQIESSAFKKLKNKKRTKHFQQYL 1300


>ref|XP_006417677.1| hypothetical protein EUTSA_v10007187mg [Eutrema salsugineum]
            gi|557095448|gb|ESQ36030.1| hypothetical protein
            EUTSA_v10007187mg [Eutrema salsugineum]
          Length = 579

 Score =  534 bits (1375), Expect = e-149
 Identities = 270/380 (71%), Positives = 316/380 (83%)
 Frame = -3

Query: 1553 SDDMEPTKDXXXXXXXXXXESIAVRSTRQGXXXXXXXXXXXXXAPNVVPVKLRSNSRRKR 1374
            S D++  K            S AVRSTRQ              A ++  VK  S+SR+KR
Sbjct: 198  SGDLKSEKQEVELLEEQLSVSSAVRSTRQTERKARRAKGLEKTASSMQSVKTGSSSRKKR 257

Query: 1373 TAVQDVDYSDPLRYLRGTTSSSRILTASEELEFSAGIQDLLKLENLHDELQEKSGGEPSF 1194
               Q+VD++DPLRYLR TTSSS++LTA EE E S GIQDLLKLE L  EL E+ G +P+F
Sbjct: 258  APSQEVDHNDPLRYLRMTTSSSKLLTAREEQELSEGIQDLLKLERLQAELTERCGHQPTF 317

Query: 1193 AQWAAAAGVDQRALRKRLNHGVMCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRG 1014
            AQWA+AAGVDQ++LRKR+N+G  CKD+MIKSNIRLVISIAKNYQG GMNLQDLVQEGCRG
Sbjct: 318  AQWASAAGVDQKSLRKRINYGTQCKDRMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRG 377

Query: 1013 LVKGAEKFDATKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYKVKEARKQLY 834
            LV+GAEKFDATKGFKFSTYAHWWIKQAVRK LSDQSR IRLPFHMVEATY+VKEARKQLY
Sbjct: 378  LVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLY 437

Query: 833  TKNGRQPDNEEVAEATGLSMKRLNAVLMTPKPPRSLDQKIGTDMNLKPSEVIADPEAETS 654
            ++ G+QP+NEEVAEATGLSMKRL AVL++PKPPRSLDQKIG + NLKPSEVIADPEAETS
Sbjct: 438  SETGKQPENEEVAEATGLSMKRLMAVLLSPKPPRSLDQKIGINQNLKPSEVIADPEAETS 497

Query: 653  EDLVTKQFLKQDIDKVLDTLTLREKQVIRWRYGLEDGRMKTLQEIGALMGVSRERIRQIE 474
            ED++ KQF++QD+DKVLD+L+ REKQVIRWR+G+EDGRMKTLQEIG  MGVSRER+RQIE
Sbjct: 498  EDILIKQFMRQDLDKVLDSLSTREKQVIRWRFGMEDGRMKTLQEIGETMGVSRERVRQIE 557

Query: 473  LSAFRKLQSKKRTKYLEEYM 414
             SAFRKL++KKR+ +L++Y+
Sbjct: 558  SSAFRKLKNKKRSNHLQQYL 577


>ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Capsella rubella]
            gi|482575837|gb|EOA40024.1| hypothetical protein
            CARUB_v10008711mg [Capsella rubella]
          Length = 571

 Score =  533 bits (1373), Expect = e-149
 Identities = 267/360 (74%), Positives = 309/360 (85%)
 Frame = -3

Query: 1493 SIAVRSTRQGXXXXXXXXXXXXXAPNVVPVKLRSNSRRKRTAVQDVDYSDPLRYLRGTTS 1314
            S+AVRSTRQ              A  +  VK  S+ R+KR   Q+VD++DPLRYLR TTS
Sbjct: 208  SLAVRSTRQTERKARRAKGLEKSASAIPSVKTGSSPRKKRVVAQEVDHNDPLRYLRVTTS 267

Query: 1313 SSRILTASEELEFSAGIQDLLKLENLHDELQEKSGGEPSFAQWAAAAGVDQRALRKRLNH 1134
            SS++LT  EE E SAGIQDLLKLE L  EL E+ G +P+F+QWA+AAGVDQ++LRKR+N+
Sbjct: 268  SSKLLTVREEHELSAGIQDLLKLERLQAELTERCGRQPTFSQWASAAGVDQKSLRKRINY 327

Query: 1133 GVMCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVKGAEKFDATKGFKFSTYA 954
            G  CKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEGCRGLV+GAEKFDATKGFKFSTYA
Sbjct: 328  GTQCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYA 387

Query: 953  HWWIKQAVRKFLSDQSRTIRLPFHMVEATYKVKEARKQLYTKNGRQPDNEEVAEATGLSM 774
            HWWIKQAVRK LSDQSR IRLPFHMVEATY+VKEARKQLYT+ GR P+NEEVAEATGLSM
Sbjct: 388  HWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYTEKGRHPENEEVAEATGLSM 447

Query: 773  KRLNAVLMTPKPPRSLDQKIGTDMNLKPSEVIADPEAETSEDLVTKQFLKQDIDKVLDTL 594
            KRL AVL++PKPPRSLDQKIG + NLKPSEVIADPEAETSED++ KQF+++D+DKVLD+L
Sbjct: 448  KRLMAVLLSPKPPRSLDQKIGMNQNLKPSEVIADPEAETSEDILIKQFMREDLDKVLDSL 507

Query: 593  TLREKQVIRWRYGLEDGRMKTLQEIGALMGVSRERIRQIELSAFRKLQSKKRTKYLEEYM 414
              REKQVIRWR+G+EDGRMKTLQEIG LMGVSRER+RQIE SAFRKL++KKR+ +L++Y+
Sbjct: 508  GTREKQVIRWRFGMEDGRMKTLQEIGELMGVSRERVRQIESSAFRKLKNKKRSNHLQQYL 567