BLASTX nr result
ID: Achyranthes23_contig00003955
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00003955
(1187 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor... 279 2e-72
emb|CBI33876.3| unnamed protein product [Vitis vinifera] 277 5e-72
gb|EMJ10617.1| hypothetical protein PRUPE_ppa009362mg [Prunus pe... 275 3e-71
ref|XP_004301780.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 269 2e-69
ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ri... 267 5e-69
ref|XP_006428430.1| hypothetical protein CICLE_v10012439mg [Citr... 265 2e-68
gb|EXB32996.1| 31 kDa ribonucleoprotein [Morus notabilis] 260 7e-67
ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 259 1e-66
ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor... 259 1e-66
ref|XP_004245902.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 258 4e-66
gb|ABK96729.1| unknown [Populus trichocarpa x Populus deltoides] 254 6e-65
ref|XP_002326529.1| predicted protein [Populus trichocarpa] gi|5... 253 8e-65
ref|NP_001242808.1| uncharacterized protein LOC100793319 [Glycin... 252 2e-64
ref|XP_003534278.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop... 251 5e-64
gb|EOY23975.1| RNA-binding family protein isoform 1 [Theobroma c... 248 3e-63
ref|XP_006352864.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 247 8e-63
ref|XP_006294626.1| hypothetical protein CARUB_v10023663mg [Caps... 246 2e-62
ref|XP_002879549.1| hypothetical protein ARALYDRAFT_482506 [Arab... 244 4e-62
ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) family protein... 241 4e-61
gb|AFK48727.1| unknown [Lotus japonicus] 236 1e-59
>ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic [Vitis
vinifera]
Length = 288
Score = 279 bits (713), Expect = 2e-72
Identities = 151/265 (56%), Positives = 184/265 (69%), Gaps = 8/265 (3%)
Frame = +2
Query: 77 PSLIHLHISNSTLSFPLKSPFYPC----NTPLIKPSFELQASAEGVALEEIPTETQDKNG 244
P + LH S S LK P YP P K SFEL +S + + +E P +TQ+ N
Sbjct: 28 PPSMSLHSSAFIPSICLKYPLYPLPLLYTNPTTKFSFELCSSVQEIEVEAKPEQTQEPNQ 87
Query: 245 KKKLYVVNLPWNLSSDELKSLFSECGTVKDVELIRDKGGRNRGFGFVTMASADEAQAVID 424
K+KL+V+NLPW+LS ++K+LF ECGTV DVE+I+ K GR+RG+ FVTM S +EAQAV++
Sbjct: 88 KRKLFVLNLPWSLSVVDIKNLFGECGTVTDVEIIKQKDGRSRGYAFVTMDSGEEAQAVVE 147
Query: 425 KFHSKELSGRTIKVEFARRLKKPRPQPPT----ILVKETRHKLYVSNLQWKVRSTHLREF 592
KF S ELSGR I+VEFA+R KKP P PP ETRHKLYVSNL WKVRSTHLREF
Sbjct: 148 KFDSYELSGRIIRVEFAKRFKKPSPPPPPPPAGPPAGETRHKLYVSNLAWKVRSTHLREF 207
Query: 593 FASNFTPVSARVIFESSPSGRSAGYGFVSFNTKEEAEAAISTLDGQELLGRPVRLKLSEE 772
F+SNF PVS RV+F+ SPSGRS GYGF SF TKEEAEAAIS LDG+EL+GRPV LK S +
Sbjct: 208 FSSNFNPVSVRVVFD-SPSGRSGGYGFASFATKEEAEAAISALDGKELMGRPVHLKFSVK 266
Query: 773 NSEGEVPNEADEKDNSKESKGVVDE 847
+ DEK+ S+G +E
Sbjct: 267 T----IDESGDEKEEGDISEGQPEE 287
>emb|CBI33876.3| unnamed protein product [Vitis vinifera]
Length = 258
Score = 277 bits (709), Expect = 5e-72
Identities = 150/260 (57%), Positives = 182/260 (70%), Gaps = 8/260 (3%)
Frame = +2
Query: 92 LHISNSTLSFPLKSPFYPC----NTPLIKPSFELQASAEGVALEEIPTETQDKNGKKKLY 259
LH S S LK P YP P K SFEL +S + + +E P +TQ+ N K+KL+
Sbjct: 3 LHSSAFIPSICLKYPLYPLPLLYTNPTTKFSFELCSSVQEIEVEAKPEQTQEPNQKRKLF 62
Query: 260 VVNLPWNLSSDELKSLFSECGTVKDVELIRDKGGRNRGFGFVTMASADEAQAVIDKFHSK 439
V+NLPW+LS ++K+LF ECGTV DVE+I+ K GR+RG+ FVTM S +EAQAV++KF S
Sbjct: 63 VLNLPWSLSVVDIKNLFGECGTVTDVEIIKQKDGRSRGYAFVTMDSGEEAQAVVEKFDSY 122
Query: 440 ELSGRTIKVEFARRLKKPRPQPPT----ILVKETRHKLYVSNLQWKVRSTHLREFFASNF 607
ELSGR I+VEFA+R KKP P PP ETRHKLYVSNL WKVRSTHLREFF+SNF
Sbjct: 123 ELSGRIIRVEFAKRFKKPSPPPPPPPAGPPAGETRHKLYVSNLAWKVRSTHLREFFSSNF 182
Query: 608 TPVSARVIFESSPSGRSAGYGFVSFNTKEEAEAAISTLDGQELLGRPVRLKLSEENSEGE 787
PVS RV+F+ SPSGRS GYGF SF TKEEAEAAIS LDG+EL+GRPV LK S +
Sbjct: 183 NPVSVRVVFD-SPSGRSGGYGFASFATKEEAEAAISALDGKELMGRPVHLKFSVKT---- 237
Query: 788 VPNEADEKDNSKESKGVVDE 847
+ DEK+ S+G +E
Sbjct: 238 IDESGDEKEEGDISEGQPEE 257
>gb|EMJ10617.1| hypothetical protein PRUPE_ppa009362mg [Prunus persica]
Length = 295
Score = 275 bits (703), Expect = 3e-71
Identities = 153/272 (56%), Positives = 193/272 (70%), Gaps = 11/272 (4%)
Frame = +2
Query: 65 PKSSPSLIHLHISNS----TLSFPLKSPFYPCNTPLIKPSFELQASA------EGVALEE 214
PK S SL LHISNS + +F SP N P KP FEL SA E A+EE
Sbjct: 29 PKPSTSL-KLHISNSIPPISRNFLYSSPPCILNNPTRKPFFELMCSAVQEVTAEEEAVEE 87
Query: 215 IPTETQDKNGKKKLYVVNLPWNLSSDELKSLFSECGTVKDVELIRDKGGRNRGFGFVTMA 394
ETQ +N K+KLYVVNLPW+L+ ++K+LF ECGTV DVE+I+ G++RGF FVTMA
Sbjct: 88 KAEETQTQNLKRKLYVVNLPWSLTVVDIKNLFGECGTVTDVEIIKQPNGKSRGFAFVTMA 147
Query: 395 SADEAQAVIDKFHSKELSGRTIKVEFARRLKKPRPQPPTILVKETRHKLYVSNLQWKVRS 574
S +EAQAVI+KFHS E+ RTI+VEFA++ KKP P PP + ETR+KLYVSNL WKVRS
Sbjct: 148 SGEEAQAVIEKFHSHEVLDRTIRVEFAKQFKKPSPPPPNPQIVETRYKLYVSNLGWKVRS 207
Query: 575 THLREFFASNF-TPVSARVIFESSPSGRSAGYGFVSFNTKEEAEAAISTLDGQELLGRPV 751
+HLR+F + NF PVSARV+F S PSG+S GYGF+SF TKEEAE+AIS+L+G+EL+GRP+
Sbjct: 208 SHLRDFVSENFKVPVSARVVF-SGPSGKSGGYGFLSFATKEEAESAISSLNGKELMGRPL 266
Query: 752 RLKLSEENSEGEVPNEADEKDNSKESKGVVDE 847
LK SE+N N +KD ++ +G +E
Sbjct: 267 NLKFSEKNDR----NSGSQKDEEEKFEGQPEE 294
>ref|XP_004301780.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 299
Score = 269 bits (687), Expect = 2e-69
Identities = 164/301 (54%), Positives = 207/301 (68%), Gaps = 31/301 (10%)
Frame = +2
Query: 71 SSPSLIHLHISNSTLSFP----LKSP---------FYPCNTPLI---KPSFELQASAEGV 202
S PSL + S+ TLSFP L+ P F + PLI K SFEL SA
Sbjct: 9 SLPSL-YSPCSSKTLSFPKPLNLRLPSFIPPISHNFLLSSPPLIPARKLSFELLCSA--- 64
Query: 203 ALEEIPTETQDK--------------NGKKKLYVVNLPWNLSSDELKSLFSECGTVKDVE 340
++EI T+ +++ N K+KLYVVNLPW+L+ ++K+LF +CG VKDVE
Sbjct: 65 -VQEITTQEEEQAEQESAEEKTQKQQNLKRKLYVVNLPWSLTVADIKTLFGQCGHVKDVE 123
Query: 341 LIRDKGGRNRGFGFVTMASADEAQAVIDKFHSKELSGRTIKVEFARRLKKPRPQPPTILV 520
+I+ GRNRGF FVTMAS +EAQAVIDKF S+ELSGRT+KVEFA++ KKP P+P T V
Sbjct: 124 IIKQMDGRNRGFAFVTMASGEEAQAVIDKFDSQELSGRTVKVEFAKQFKKPTPRPSTPKV 183
Query: 521 KETRHKLYVSNLQWKVRSTHLREFFASNF-TPVSARVIFESSPSGRSAGYGFVSFNTKEE 697
+ETR+KLYVSNL WK RS+HLR+F + NF TPVSARV+F+ PSG+S GYGFVSF EE
Sbjct: 184 QETRYKLYVSNLAWKARSSHLRDFVSLNFKTPVSARVVFD-GPSGKSVGYGFVSFARMEE 242
Query: 698 AEAAISTLDGQELLGRPVRLKLSEENSEGEVPNEADEKDNSKESKGVVDEKEVSDDQPSE 877
AE AIS L+GQEL+GRPV LK SE+N GE N+ +EKDNS + + V +EK ++QP E
Sbjct: 243 AEEAISALNGQELMGRPVTLKFSEKNI-GESTNQ-EEKDNSNQEEKVEEEK--LENQPEE 298
Query: 878 S 880
S
Sbjct: 299 S 299
>ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532973|gb|EEF34739.1| ribonucleoprotein,
chloroplast, putative [Ricinus communis]
Length = 278
Score = 267 bits (683), Expect = 5e-69
Identities = 152/283 (53%), Positives = 198/283 (69%), Gaps = 9/283 (3%)
Frame = +2
Query: 5 MEAIARATILFPTHLLPKFQPKSSPSLIHL--HISNSTLSFPLKSPFYPCNTPLI---KP 169
M A+ A LF H + SP+ I+L H S S PL S + + + K
Sbjct: 1 MAAMEAAVSLFLPHPSSSSKSLLSPTFINLFKHKCRSN-SIPLLSHNFSLSNIHLTARKL 59
Query: 170 SFELQASAEGVALEEIPTETQDKNGKKKLYVVNLPWNLSSDELKSLFSECGTVKDVELIR 349
SFE ++A+ + IP ETQ+ K+KLYV NLPW+LS ++K+LF +CGTV DVE+I+
Sbjct: 60 SFERFSTAQEIM---IPEETQETTQKRKLYVFNLPWSLSVVDIKNLFGQCGTVTDVEIIK 116
Query: 350 DKGGRNRGFGFVTMASADEAQAVIDKFHSKELSGRTIKVEFARRLKKPRPQPPT-ILVKE 526
K GR+RGF FVT+AS +EAQA IDK S E+SGR I+VEFA+RLK P P PT +E
Sbjct: 117 QKNGRSRGFAFVTLASGEEAQAAIDKLDSHEVSGRIIRVEFAKRLKPPSPPSPTGTSARE 176
Query: 527 TRHKLYVSNLQWKVRSTHLREFFASNFTPVSARVIFESSPSGRSAGYGFVSFNTKEEAEA 706
TRHK+YVSNL WKVRSTHLREFF++NF+PVS+RV+F+ SP+GRS+GYGFVSF T+EEAEA
Sbjct: 177 TRHKIYVSNLAWKVRSTHLREFFSTNFSPVSSRVVFD-SPTGRSSGYGFVSFATREEAEA 235
Query: 707 AISTLDGQELLGRPVRLKLSE---ENSEGEVPNEADEKDNSKE 826
AIS LDG+EL+GRP+RLK S+ + SE E E + +D S++
Sbjct: 236 AISALDGKELMGRPLRLKFSDRKTDESESENQEEENVEDQSEQ 278
>ref|XP_006428430.1| hypothetical protein CICLE_v10012439mg [Citrus clementina]
gi|567871683|ref|XP_006428431.1| hypothetical protein
CICLE_v10012439mg [Citrus clementina]
gi|567871685|ref|XP_006428432.1| hypothetical protein
CICLE_v10012439mg [Citrus clementina]
gi|568877400|ref|XP_006491727.1| PREDICTED:
ribonucleoprotein At2g37220, chloroplastic-like isoform
X1 [Citrus sinensis] gi|568877402|ref|XP_006491728.1|
PREDICTED: ribonucleoprotein At2g37220,
chloroplastic-like isoform X2 [Citrus sinensis]
gi|568877404|ref|XP_006491729.1| PREDICTED:
ribonucleoprotein At2g37220, chloroplastic-like isoform
X3 [Citrus sinensis] gi|557530487|gb|ESR41670.1|
hypothetical protein CICLE_v10012439mg [Citrus
clementina] gi|557530488|gb|ESR41671.1| hypothetical
protein CICLE_v10012439mg [Citrus clementina]
gi|557530489|gb|ESR41672.1| hypothetical protein
CICLE_v10012439mg [Citrus clementina]
Length = 275
Score = 265 bits (678), Expect = 2e-68
Identities = 147/292 (50%), Positives = 201/292 (68%), Gaps = 4/292 (1%)
Frame = +2
Query: 17 ARATILFPTHLLPKFQ---PKSSPSLIHLHISNSTLSFPLKSPFYPCNTPLIKPSFELQA 187
A AT +F T+ F PK + LH SNST P N P ++ +
Sbjct: 6 AAATSIFLTNYPFSFSCLFPKLPHCIKLLHSSNST-------PSLIYNFPTRNVCLQVCS 58
Query: 188 SAEGVALEEIPTETQDKNGKKKLYVVNLPWNLSSDELKSLFSECGTVKDVELIRDKGGRN 367
+ + ++ P +TQ +N ++K+YV NLPW+ S E+K+LF+ CGTV DVE+I+ KGG+N
Sbjct: 59 TLQDTTVQTKPEQTQKQNIRRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKHKGGKN 118
Query: 368 RGFGFVTMASADEAQAVIDKFHSKELSGRTIKVEFARRLKKPRPQ-PPTILVKETRHKLY 544
R F FVTMAS +EAQA +++F ++E+SGR I+VEFA++ KKPRPQ + +ET+HKLY
Sbjct: 119 RNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARETQHKLY 178
Query: 545 VSNLQWKVRSTHLREFFASNFTPVSARVIFESSPSGRSAGYGFVSFNTKEEAEAAISTLD 724
VSNL WKVRSTHLREFF++NF PVS++V+FES+ GRSAGYGFVSF TKEEAEAAIS+LD
Sbjct: 179 VSNLSWKVRSTHLREFFSANFNPVSSKVVFESN-EGRSAGYGFVSFATKEEAEAAISSLD 237
Query: 725 GQELLGRPVRLKLSEENSEGEVPNEADEKDNSKESKGVVDEKEVSDDQPSES 880
G+EL+GRP+RLK ++N D +++KE E++VS+DQ +ES
Sbjct: 238 GKELMGRPLRLKFGQKND--------DVSESNKE------EEDVSEDQSAES 275
>gb|EXB32996.1| 31 kDa ribonucleoprotein [Morus notabilis]
Length = 295
Score = 260 bits (665), Expect = 7e-67
Identities = 149/276 (53%), Positives = 195/276 (70%), Gaps = 4/276 (1%)
Frame = +2
Query: 65 PKSSPSLIHLHISNSTLSFPLKSPFYPCNTPLIKPSFELQASAEGVALEEIPTET---QD 235
P++ + LH +NS SF S P + L F +Q + +A++E ET ++
Sbjct: 36 PRTRTHSLKLHSANSC-SFLQSSTRNPWSFRLC---FSVQE--QEIAVQEKAEETHLEKE 89
Query: 236 KNGKKKLYVVNLPWNLSSDELKSLFSECGTVKDVELIRDKGGRNRGFGFVTMASADEAQA 415
N K+KLYVVNLPW+L+ ++KSLF +CGTV DVE+I+ K GRNRGF FVTMA +EAQA
Sbjct: 90 NNQKRKLYVVNLPWSLTVVDIKSLFGQCGTVTDVEIIKQKDGRNRGFAFVTMACGEEAQA 149
Query: 416 VIDKFHSKELSGRTIKVEFARRLKKPR-PQPPTILVKETRHKLYVSNLQWKVRSTHLREF 592
VID+F+ +++SGR IK+E A++ KKP P+PP ET HKLYVSN++WKVRSTHLR+F
Sbjct: 150 VIDRFNLQDVSGRIIKIELAKQFKKPSPPRPPGPQPGETTHKLYVSNIEWKVRSTHLRDF 209
Query: 593 FASNFTPVSARVIFESSPSGRSAGYGFVSFNTKEEAEAAISTLDGQELLGRPVRLKLSEE 772
+ NF PVSARV+F+ P GRSAGYGFVSF T+EEAEAAIS+LDG+EL+GRP+RLK SE+
Sbjct: 210 VSENFKPVSARVVFD-GPKGRSAGYGFVSFATREEAEAAISSLDGKELMGRPLRLKFSEK 268
Query: 773 NSEGEVPNEADEKDNSKESKGVVDEKEVSDDQPSES 880
N+ GE DE +N KE E+ VS+ Q ES
Sbjct: 269 NA-GE--KNVDETENQKE------EETVSEGQTEES 295
>ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 288
Score = 259 bits (662), Expect = 1e-66
Identities = 146/265 (55%), Positives = 183/265 (69%), Gaps = 14/265 (5%)
Frame = +2
Query: 77 PSLIHLHISNSTLSFPLKSPFYPCN--TPLIKPSFE----------LQASAEGVALEEIP 220
PS I L IS S SP N TP+ SF L ++ + V LEE
Sbjct: 32 PSPIKLRISFS-------SPLLSLNPTTPISPTSFNSSRNRGGGARLCSALQEVTLEEAS 84
Query: 221 TETQDKNGKKKLYVVNLPWNLSSDELKSLFSECGTVKDVELIRDKGGRNRGFGFVTMASA 400
E QD N K+KLY+ NLPW+LS ++K LF +CGTV DVE+I+ K GR+RGF FVTMAS
Sbjct: 85 EENQDVNQKRKLYIFNLPWSLSVVDIKELFGQCGTVSDVEIIKQKNGRSRGFAFVTMASP 144
Query: 401 DEAQAVIDKFHSKELSGRTIKVEFARRLKK-PRPQPPTILVKETRHKLYVSNLQWKVRST 577
DEAQA I KF S+E+SGR IKVEFA+RLKK P P+PP ET +KLYVSNL WKVRS
Sbjct: 145 DEAQAAIQKFDSQEISGRVIKVEFAKRLKKPPPPKPPGPPPGETVNKLYVSNLAWKVRSN 204
Query: 578 HLREFFASNFTPVSARVIFESSPSGRSAGYGFVSFNTKEEAEAAISTLDGQELLGRPVRL 757
+LR+FF+ NF P++ARV+F+ SP+GRSAGYGFVSF T+EEA+ A+S+L+G+EL+GRP+RL
Sbjct: 205 NLRDFFSENFNPIAARVVFD-SPAGRSAGYGFVSFATREEAQTALSSLEGKELMGRPLRL 263
Query: 758 KLSEEN-SEGEVPNEADEKDNSKES 829
K SE N +E E P E + +ES
Sbjct: 264 KFSERNVNEAETPKEDIVESQPEES 288
>ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like [Cucumis
sativus]
Length = 282
Score = 259 bits (662), Expect = 1e-66
Identities = 146/265 (55%), Positives = 183/265 (69%), Gaps = 14/265 (5%)
Frame = +2
Query: 77 PSLIHLHISNSTLSFPLKSPFYPCN--TPLIKPSFE----------LQASAEGVALEEIP 220
PS I L IS S SP N TP+ SF L ++ + V LEE
Sbjct: 26 PSPIKLRISFS-------SPLLSLNPTTPISPTSFNSSRNRGGGARLCSALQEVTLEEAS 78
Query: 221 TETQDKNGKKKLYVVNLPWNLSSDELKSLFSECGTVKDVELIRDKGGRNRGFGFVTMASA 400
E QD N K+KLY+ NLPW+LS ++K LF +CGTV DVE+I+ K GR+RGF FVTMAS
Sbjct: 79 EENQDVNQKRKLYIFNLPWSLSVVDIKELFGQCGTVSDVEIIKQKNGRSRGFAFVTMASP 138
Query: 401 DEAQAVIDKFHSKELSGRTIKVEFARRLKK-PRPQPPTILVKETRHKLYVSNLQWKVRST 577
DEAQA I KF S+E+SGR IKVEFA+RLKK P P+PP ET +KLYVSNL WKVRS
Sbjct: 139 DEAQAAIQKFDSQEISGRVIKVEFAKRLKKPPPPKPPGPPPGETVNKLYVSNLAWKVRSN 198
Query: 578 HLREFFASNFTPVSARVIFESSPSGRSAGYGFVSFNTKEEAEAAISTLDGQELLGRPVRL 757
+LR+FF+ NF P++ARV+F+ SP+GRSAGYGFVSF T+EEA+ A+S+L+G+EL+GRP+RL
Sbjct: 199 NLRDFFSENFNPIAARVVFD-SPAGRSAGYGFVSFATREEAQTALSSLEGKELMGRPLRL 257
Query: 758 KLSEEN-SEGEVPNEADEKDNSKES 829
K SE N +E E P E + +ES
Sbjct: 258 KFSERNVNEAETPKEDIVESQPEES 282
>ref|XP_004245902.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Solanum
lycopersicum]
Length = 285
Score = 258 bits (658), Expect = 4e-66
Identities = 139/258 (53%), Positives = 186/258 (72%), Gaps = 8/258 (3%)
Frame = +2
Query: 77 PSLIHLHISNSTLSFPLKSPFYPCNTPLIKPSFELQASA----EGVALEEIPTETQDKNG 244
P+ I L N +L+ LKS YP P K +L SA E V ++E TE KN
Sbjct: 28 PNSIKLQNYNHSLNLSLKSILYPLPLPSRKQCTQLHCSAVEVTEPVTVQEEKTEKPQKNN 87
Query: 245 -KKKLYVVNLPWNLSSDELKSLFSECGTVKDVELIRDKGGRNRGFGFVTMASADEAQAVI 421
++KL+V+NLPW+L+ ++K++F+ECG V DVE+I+ K G++RGF FVTM+S +EAQA I
Sbjct: 88 QRRKLFVLNLPWSLTVADIKNIFAECGIVDDVEIIKTKDGKSRGFAFVTMSSGEEAQAAI 147
Query: 422 DKFHSKELSGRTIKVEFARRLKKP--RPQPPTILVKETRHKLYVSNLQWKVRSTHLREFF 595
DK S E+SGR I+VEFA+R KKP P P T E RHKLYVSNL WKVRST LREFF
Sbjct: 148 DKLDSYEVSGRIIRVEFAKRFKKPPGAPPPSTPPQGEARHKLYVSNLAWKVRSTQLREFF 207
Query: 596 ASNFTPVSARVIFESSPSGRSAGYGFVSFNTKEEAEAAISTLDGQELLGRPVRLKLSEEN 775
++N P+SARV+F+++ SGR+AGYGFV+F+TKE+AEAA+S LDG+EL+GRP+RLK SE +
Sbjct: 208 SANNNPISARVVFDNA-SGRAAGYGFVTFDTKEQAEAALSALDGKELMGRPIRLKFSERD 266
Query: 776 SEG-EVPNEADEKDNSKE 826
++G E EA ++N +E
Sbjct: 267 ADGSENKEEAPTQENPEE 284
>gb|ABK96729.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 294
Score = 254 bits (648), Expect = 6e-65
Identities = 139/272 (51%), Positives = 185/272 (68%), Gaps = 10/272 (3%)
Frame = +2
Query: 65 PKSSPSLIHLHISNST--LSFPLKSPFYPCNTPLIKP-SFELQASAEGVALEEIPTET-- 229
PKS P ++LHISN T +S P N P K F+L ++ + V +E P E
Sbjct: 28 PKSPPLSLNLHISNPTPLISHNFPQPSLTQNHPRSKSLCFQLCSTVQEVTMEITPEEEEI 87
Query: 230 QDKNGKKKLYVVNLPWNLSSDELKSLFSECGTVKDVELIRDKGGRNRGFGFVTMASADEA 409
Q+ N K+KL+VVNLPW+ S ++K LF +CGTV DVE+I+ K GR+RGF FVTM + +EA
Sbjct: 88 QEANLKRKLFVVNLPWSFSVVDIKDLFGQCGTVSDVEIIKQKNGRSRGFAFVTMTTGEEA 147
Query: 410 QAVIDKFHSKELSGRTIKVEFARRLKKPRP-----QPPTILVKETRHKLYVSNLQWKVRS 574
QA IDKF+S E+SGR I+VEFA+RL++P P I ETRHKLY+SNL WKVR
Sbjct: 148 QAAIDKFNSLEVSGRIIRVEFAKRLRRPPSPRLPGTPADIPAGETRHKLYISNLAWKVRG 207
Query: 575 THLREFFASNFTPVSARVIFESSPSGRSAGYGFVSFNTKEEAEAAISTLDGQELLGRPVR 754
+HLREFF++N PVS+RV+F+ P+GRS+GYGFVSF T+EEA AAIS G+EL+GRP+R
Sbjct: 208 SHLREFFSTNCNPVSSRVVFD-GPAGRSSGYGFVSFATREEAVAAISAFSGKELMGRPIR 266
Query: 755 LKLSEENSEGEVPNEADEKDNSKESKGVVDEK 850
LK SE+ ++ EK + S+ ++EK
Sbjct: 267 LKFSEDKAD----ESGTEKKEEETSEVQLEEK 294
>ref|XP_002326529.1| predicted protein [Populus trichocarpa]
gi|566146773|ref|XP_006368391.1| 33 kDa
ribonucleoprotein [Populus trichocarpa]
gi|550346304|gb|ERP64960.1| 33 kDa ribonucleoprotein
[Populus trichocarpa]
Length = 294
Score = 253 bits (647), Expect = 8e-65
Identities = 139/272 (51%), Positives = 185/272 (68%), Gaps = 10/272 (3%)
Frame = +2
Query: 65 PKSSPSLIHLHISNST--LSFPLKSPFYPCNTPLIKP-SFELQASAEGVALEEIPTET-- 229
PKS P ++LHISN T +S P N P K F+L ++ + V +E P E
Sbjct: 28 PKSPPLSLNLHISNPTPLISHNFPQPSLTQNHPRSKSLCFQLCSTVQEVTVEITPEEEEI 87
Query: 230 QDKNGKKKLYVVNLPWNLSSDELKSLFSECGTVKDVELIRDKGGRNRGFGFVTMASADEA 409
Q+ N K+KL+VVNLPW+ S ++K LF +CGTV DVE+I+ K GR+RGF FVTM + +EA
Sbjct: 88 QEANLKRKLFVVNLPWSFSVVDIKDLFGQCGTVSDVEIIKQKNGRSRGFAFVTMTTGEEA 147
Query: 410 QAVIDKFHSKELSGRTIKVEFARRLKKPRP-----QPPTILVKETRHKLYVSNLQWKVRS 574
QA IDKF+S E+SGR I+VEFA+RL++P P I ETRHKLY+SNL WKVR
Sbjct: 148 QAAIDKFNSLEVSGRIIRVEFAKRLRRPPSPRLPGTPADIPAGETRHKLYISNLAWKVRG 207
Query: 575 THLREFFASNFTPVSARVIFESSPSGRSAGYGFVSFNTKEEAEAAISTLDGQELLGRPVR 754
+HLREFF++N PVS+RV+F+ P+GRS+GYGFVSF T+EEA AAIS G+EL+GRP+R
Sbjct: 208 SHLREFFSTNCNPVSSRVVFD-GPAGRSSGYGFVSFATREEAVAAISAFSGKELMGRPIR 266
Query: 755 LKLSEENSEGEVPNEADEKDNSKESKGVVDEK 850
LK SE+ ++ EK + S+ ++EK
Sbjct: 267 LKFSEDKAD----ESGTEKKEEETSEVQLEEK 294
>ref|NP_001242808.1| uncharacterized protein LOC100793319 [Glycine max]
gi|255639879|gb|ACU20232.1| unknown [Glycine max]
Length = 289
Score = 252 bits (643), Expect = 2e-64
Identities = 149/273 (54%), Positives = 186/273 (68%), Gaps = 4/273 (1%)
Frame = +2
Query: 74 SPSLIHLHISNSTLSFPLKSPFYPCNTPLIKPSFELQASAEGVAL-EEIPTETQDKNGKK 250
+P I LH S S L F KS F F+L ++ + VA EE P TQ + K
Sbjct: 27 APISIKLHASTS-LFFSSKSSFKTGRL-----CFQLCSTLQEVAATEETPELTQPTDNVK 80
Query: 251 KLYVVNLPWNLSSDELKSLFSECGTVKDVELIRDKGGRNRGFGFVTMASADEAQAVIDKF 430
KLYVVNL W+L++ ++ LF++ GTV DVE+I+ K GR++G+ FVTMAS +EAQA +DKF
Sbjct: 81 KLYVVNLSWSLTAADINDLFAQSGTVTDVEIIKSKDGRSKGYAFVTMASGEEAQAAVDKF 140
Query: 431 HSKELSGRTIKVEFARRLKKPR--PQPPTILVKETRHKLYVSNLQWKVRSTHLREFFASN 604
S ELSGR I+VE A+R KKP P PP ETRH +Y SNL WK RSTHLR+ FA N
Sbjct: 141 DSYELSGRIIRVELAKRFKKPPSPPPPPGPRPGETRHVIYASNLAWKARSTHLRQLFAEN 200
Query: 605 F-TPVSARVIFESSPSGRSAGYGFVSFNTKEEAEAAISTLDGQELLGRPVRLKLSEENSE 781
F TP SARV+F+S PSGRSAGYGFVSF TKE+AEAAIST+DG+EL+GRP+RLK SE+ +
Sbjct: 201 FKTPSSARVVFDS-PSGRSAGYGFVSFLTKEDAEAAISTVDGKELMGRPLRLKFSEK--K 257
Query: 782 GEVPNEADEKDNSKESKGVVDEKEVSDDQPSES 880
+ E DE D K++ DE E SD +P ES
Sbjct: 258 DKAGREKDE-DQDKDAGSEEDEDEGSDARPEES 289
>ref|XP_003534278.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 282
Score = 251 bits (640), Expect = 5e-64
Identities = 150/285 (52%), Positives = 188/285 (65%), Gaps = 5/285 (1%)
Frame = +2
Query: 41 THLLPKFQPKSSPSLIHLHISNSTLSFPLKSPFYPCNTPLIKPSFELQASAEGVALEEIP 220
T P+ +P I LH S S + F KS F F+L ++ + VA E
Sbjct: 9 TLFAPQRFSAKAPISIKLHASTSHI-FSSKSFFKTGRL-----CFQLCSTLQEVAPTEQT 62
Query: 221 TET-QDKNGKKKLYVVNLPWNLSSDELKSLFSECGTVKDVELIRDKGGRNRGFGFVTMAS 397
E Q + KKLYVVNL W+L++ ++ LF++CGTV DVE+I+ K GR++G+ FVTMAS
Sbjct: 63 LEPIQPTDNVKKLYVVNLSWSLTAADITDLFAQCGTVTDVEIIKSKDGRSKGYAFVTMAS 122
Query: 398 ADEAQAVIDKFHSKELSGRTIKVEFARRLKKPR--PQPPTILVKETRHKLYVSNLQWKVR 571
+EAQA +DKF S ELSGR I+VE A+RLKKP P PP ETRH +Y SNL WK R
Sbjct: 123 GEEAQAAVDKFDSYELSGRIIRVELAKRLKKPPSLPPPPGPRPGETRHVIYASNLAWKAR 182
Query: 572 STHLREFFASNF-TPVSARVIFESSPSGRSAGYGFVSFNTKEEAEAAISTLDGQELLGRP 748
STHLR+ F NF TP SARV+F+S PSGRSAGYGFVSF T+E+AEAAIST+DG+EL+GRP
Sbjct: 183 STHLRQVFTENFKTPSSARVVFDS-PSGRSAGYGFVSFLTREDAEAAISTVDGKELMGRP 241
Query: 749 VRLKLSEENSEGEVPNEADE-KDNSKESKGVVDEKEVSDDQPSES 880
+RLK SE+N E N+ D+ KD E DE + SD QP ES
Sbjct: 242 LRLKFSEKNKEAGSQNDEDQIKDAGSEE----DEDQGSDAQPEES 282
>gb|EOY23975.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 281
Score = 248 bits (633), Expect = 3e-63
Identities = 132/228 (57%), Positives = 164/228 (71%), Gaps = 1/228 (0%)
Frame = +2
Query: 164 KPSFELQASAEGVALEEIPTETQDKNGKKKLYVVNLPWNLSSDELKSLFSECGTVKDVEL 343
KP F L ++ + V +E +TQ N K+KL+V+NLPW+ + ++K LF +CG V DVE+
Sbjct: 60 KPGFLLCSTVQEVNVEAETEKTQKSNVKRKLFVLNLPWSYTVADIKDLFGQCGNVTDVEI 119
Query: 344 IRDKGGRNRGFGFVTMASADEAQAVIDKFHSKELSGRTIKVEFARRLKKPRPQP-PTILV 520
I+ K GR+R F FVTMAS +EAQA +DK S E+S R I+VEFARR KKP P P P +
Sbjct: 120 IKQKDGRSRNFAFVTMASGEEAQAAVDKLDSHEVSARIIRVEFARRFKKPSPSPQPIVPP 179
Query: 521 KETRHKLYVSNLQWKVRSTHLREFFASNFTPVSARVIFESSPSGRSAGYGFVSFNTKEEA 700
+ET HKLYVSNL WKVRS+HLREFF S F PV+ARVIF +PSG+SAGYGFVSF TKEEA
Sbjct: 180 RETHHKLYVSNLAWKVRSSHLREFF-SAFNPVAARVIF-GTPSGQSAGYGFVSFATKEEA 237
Query: 701 EAAISTLDGQELLGRPVRLKLSEENSEGEVPNEADEKDNSKESKGVVD 844
+AAISTL+G+EL+ RP+RLK SE N V EK KE +G D
Sbjct: 238 DAAISTLNGKELMDRPLRLKFSERN----VDESGGEKKEEKEREGQTD 281
>ref|XP_006352864.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Solanum
tuberosum]
Length = 284
Score = 247 bits (630), Expect = 8e-63
Identities = 139/261 (53%), Positives = 185/261 (70%), Gaps = 11/261 (4%)
Frame = +2
Query: 77 PSLIHLHISNSTLSFPLKSPFYPCNTPLI--KPSFELQASAEGVA-----LEEIPTETQD 235
P+ I L SN +L+ LKS PL+ K +L SA V EE TE
Sbjct: 29 PNSIKLQNSNHSLNLSLKSIL-----PLLSRKQCSQLHCSAVEVTEPVTVQEEEKTEKPQ 83
Query: 236 KNG-KKKLYVVNLPWNLSSDELKSLFSECGTVKDVELIRDKGGRNRGFGFVTMASADEAQ 412
KN ++KL+V+NLPW+L+ ++K++F+ECG V DVE+I+ + G++RGF FVTM+S +EAQ
Sbjct: 84 KNNLRRKLFVLNLPWSLTVPDIKNIFAECGIVDDVEIIKTEDGKSRGFAFVTMSSGEEAQ 143
Query: 413 AVIDKFHSKELSGRTIKVEFARRLKKP--RPQPPTILVKETRHKLYVSNLQWKVRSTHLR 586
A IDK S E+ GR I+VEFA+R KKP P P T E RHKLYVSNL WKVRST LR
Sbjct: 144 AAIDKLDSYEVLGRIIRVEFAKRFKKPPGAPPPSTPPQGEARHKLYVSNLAWKVRSTQLR 203
Query: 587 EFFASNFTPVSARVIFESSPSGRSAGYGFVSFNTKEEAEAAISTLDGQELLGRPVRLKLS 766
EFF++N+ P+SARVIF+++ SGR+AGYGFVSF+TKE+AEAA+S LDG+EL+GRP+RLK S
Sbjct: 204 EFFSANYNPISARVIFDNA-SGRAAGYGFVSFDTKEQAEAAVSALDGKELMGRPIRLKFS 262
Query: 767 EENSEG-EVPNEADEKDNSKE 826
E +++G E EA ++N +E
Sbjct: 263 ERDADGSENKEEAPTQENPEE 283
>ref|XP_006294626.1| hypothetical protein CARUB_v10023663mg [Capsella rubella]
gi|482563334|gb|EOA27524.1| hypothetical protein
CARUB_v10023663mg [Capsella rubella]
Length = 318
Score = 246 bits (627), Expect = 2e-62
Identities = 141/294 (47%), Positives = 188/294 (63%), Gaps = 21/294 (7%)
Frame = +2
Query: 59 FQPKSSPSLIHLHI-SNSTLSFPLKSPFYPCNTPLIK---PSFELQASAEGVALEEIPTE 226
F +S P+ L I SN + PL S + L+ E + S E +E TE
Sbjct: 26 FSQRSKPTAFTLRIPSNHSPVVPLGSSAINNSRRLVSVLCSVTEKETSTEDETSQEDKTE 85
Query: 227 -TQDKNGKKKLYVVNLPWNLSSDELKSLFSECGTVKDVELIRDKGGRNRGFGFVTMASAD 403
TQ N K+KL+V NLPW++S ++ LF +CGTV +VE+IR K G+NRGF FVTMAS +
Sbjct: 86 ETQKSNLKRKLFVFNLPWSMSVHDISDLFRQCGTVNNVEIIRQKDGKNRGFAFVTMASGE 145
Query: 404 EAQAVIDKFHSKELSGRTIKVEFARRLKKPRPQPPTILVK----ETRHKLYVSNLQWKVR 571
EAQA +DKF + E+SGR I+V FARR KKP P+PP L +TRHKLYVSNL WK R
Sbjct: 146 EAQAAVDKFDAFEVSGRIIRVNFARRFKKPTPKPPNALPSPPPGDTRHKLYVSNLAWKAR 205
Query: 572 STHLREFF-ASNFTPVSARVIFESSPSGRSAGYGFVSFNTKEEAEAAISTLDGQELLGRP 748
STHLRE F A++F PVSARV+F + P GRS+GYGFVSF T+EEAE AI+ LDG+E++GRP
Sbjct: 206 STHLRELFTAADFNPVSARVVF-ADPEGRSSGYGFVSFATREEAENAITKLDGKEIMGRP 264
Query: 749 VRLKLS----EENSEGEVPNEAD-------EKDNSKESKGVVDEKEVSDDQPSE 877
+ LK S E+ +G+ + + E+DN+ E ++ S+++P E
Sbjct: 265 IILKFSLTTASESEDGDTVEDNNTSKDSDTEEDNTSEDGDTAEDNNTSEEKPVE 318
>ref|XP_002879549.1| hypothetical protein ARALYDRAFT_482506 [Arabidopsis lyrata subsp.
lyrata] gi|297325388|gb|EFH55808.1| hypothetical protein
ARALYDRAFT_482506 [Arabidopsis lyrata subsp. lyrata]
Length = 308
Score = 244 bits (624), Expect = 4e-62
Identities = 126/236 (53%), Positives = 166/236 (70%), Gaps = 5/236 (2%)
Frame = +2
Query: 185 ASAEGVALEEIPTETQDKNGKKKLYVVNLPWNLSSDELKSLFSECGTVKDVELIRDKGGR 364
++ E + EE ETQ N K+KL+V NLPW++S +++ LF +CGTV +VE+IR K G+
Sbjct: 74 SAEEETSQEEKTEETQKSNLKRKLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQKDGK 133
Query: 365 NRGFGFVTMASADEAQAVIDKFHSKELSGRTIKVEFARRLKKPRPQPPTILVK----ETR 532
NRGF FVTMAS +EAQA IDKF + ++SGR I V FARR KKP P+PP L +TR
Sbjct: 134 NRGFAFVTMASGEEAQAAIDKFDTSQVSGRIISVNFARRFKKPTPKPPNDLPSPPPGDTR 193
Query: 533 HKLYVSNLQWKVRSTHLREFF-ASNFTPVSARVIFESSPSGRSAGYGFVSFNTKEEAEAA 709
HKLYVSNL WK RSTHLRE F AS+F PVSARV+F + P GRS+GYGFVSF T+EEAE A
Sbjct: 194 HKLYVSNLAWKARSTHLRELFTASDFNPVSARVVF-ADPEGRSSGYGFVSFATREEAEDA 252
Query: 710 ISTLDGQELLGRPVRLKLSEENSEGEVPNEADEKDNSKESKGVVDEKEVSDDQPSE 877
I+ LDG+E++GRP+ LK S ++ + +N+ E V++K S+++ E
Sbjct: 253 IAKLDGKEIMGRPIILKFSLRSASESEDGDTVGDNNTSEDGDTVEDKNTSEEKGVE 308
>ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana] gi|3608147|gb|AAC36180.1| putative chloroplast
RNA binding protein precursor [Arabidopsis thaliana]
gi|14596023|gb|AAK68739.1| putative chloroplast RNA
binding protein precursor [Arabidopsis thaliana]
gi|23198314|gb|AAN15684.1| putative chloroplast RNA
binding protein precursor [Arabidopsis thaliana]
gi|330254012|gb|AEC09106.1| RNA-binding (RRM/RBD/RNP
motifs) family protein [Arabidopsis thaliana]
Length = 308
Score = 241 bits (615), Expect = 4e-61
Identities = 126/236 (53%), Positives = 168/236 (71%), Gaps = 6/236 (2%)
Frame = +2
Query: 176 ELQASA-EGVALEEIPTETQDKNGKKKLYVVNLPWNLSSDELKSLFSECGTVKDVELIRD 352
E + SA E + EE ETQ+ N K+KL+V NLPW++S +++ LF +CGTV +VE+IR
Sbjct: 70 EKETSADEETSQEEKTEETQNSNLKRKLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQ 129
Query: 353 KGGRNRGFGFVTMASADEAQAVIDKFHSKELSGRTIKVEFARRLKKPRPQPPTILVK--- 523
K G+NRGF FVTMAS +EAQA IDKF + ++SGR I V FARR KKP P+ P L
Sbjct: 130 KDGKNRGFAFVTMASGEEAQAAIDKFDTFQVSGRIISVSFARRFKKPTPKSPNDLPSPAP 189
Query: 524 -ETRHKLYVSNLQWKVRSTHLREFF-ASNFTPVSARVIFESSPSGRSAGYGFVSFNTKEE 697
+TRHKLYVSNL WK RSTHLRE F A++F PVSARV+F + P GRS+GYGFVSF T+EE
Sbjct: 190 GDTRHKLYVSNLAWKARSTHLRELFTAADFNPVSARVVF-ADPEGRSSGYGFVSFATREE 248
Query: 698 AEAAISTLDGQELLGRPVRLKLSEENSEGEVPNEADEKDNSKESKGVVDEKEVSDD 865
AE AI+ L+G+E++GRP+ LK S ++ ++ E +N+ E V++K S++
Sbjct: 249 AENAITKLNGKEIMGRPITLKFSLRSASESEDGDSVEANNASEDGDTVEDKNTSEE 304
>gb|AFK48727.1| unknown [Lotus japonicus]
Length = 285
Score = 236 bits (603), Expect = 1e-59
Identities = 133/254 (52%), Positives = 169/254 (66%), Gaps = 6/254 (2%)
Frame = +2
Query: 65 PKSSPSLIHLHISNSTLSFPLKSPFYPCNTPLIKPSFEL----QASAEGVALEEIPTETQ 232
P P + LH S S L S TP KP +L Q AE EE + Q
Sbjct: 23 PAKPPEFVKLHASLSHSHNLLFSSNASSKTP--KPCTQLCSALQEVAEAATEEEPEQDQQ 80
Query: 233 DKNGKKKLYVVNLPWNLSSDELKSLFSECGTVKDVELIRDKGGRNRGFGFVTMASADEAQ 412
KKKLYV NLPW++S+ ++K LF +CGTV DVE+IR K GR +G+ FVTMAS +EAQ
Sbjct: 81 ATYIKKKLYVFNLPWSMSAADIKDLFGQCGTVTDVEIIRGKDGRGKGYAFVTMASGEEAQ 140
Query: 413 AVIDKFHSKELSGRTIKVEFARRLKKPRPQ-PPTILVKETRHKLYVSNLQWKVRSTHLRE 589
A +DKF + ELSGR ++VE A+R KKP P PP+ E RH +Y SNL WKVRSTHLRE
Sbjct: 141 AAVDKFDTLELSGRILRVELAKRFKKPSPPGPPSPPPSEARHVIYASNLAWKVRSTHLRE 200
Query: 590 FFASNF-TPVSARVIFESSPSGRSAGYGFVSFNTKEEAEAAISTLDGQELLGRPVRLKLS 766
FF NF P+SAR++F+ +PSG++ GYGF+S+ TKEEAEAAIS LDG+EL+GR + LK+S
Sbjct: 201 FFTENFKAPLSARIVFD-TPSGKTTGYGFISYLTKEEAEAAISALDGKELMGRSLFLKIS 259
Query: 767 EENSEGEVPNEADE 808
E+ + E +E DE
Sbjct: 260 EKKVK-EAGSEKDE 272