BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00003954
         (1234 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor...   245   2e-62
emb|CBI33876.3| unnamed protein product [Vitis vinifera]              242   3e-61
ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ri...   227   7e-57
gb|ABK96729.1| unknown [Populus trichocarpa x Populus deltoides]      219   1e-54
ref|XP_002326529.1| predicted protein [Populus trichocarpa] gi|5...   219   2e-54
ref|XP_006428430.1| hypothetical protein CICLE_v10012439mg [Citr...   216   2e-53
ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   213   1e-52
ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor...   213   1e-52
gb|EMJ10617.1| hypothetical protein PRUPE_ppa009362mg [Prunus pe...   207   5e-51
gb|EXB32996.1| 31 kDa ribonucleoprotein [Morus notabilis]             205   3e-50
ref|XP_004245902.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   202   3e-49
ref|XP_004301780.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   200   9e-49
gb|EOY23975.1| RNA-binding family protein isoform 1 [Theobroma c...   200   1e-48
ref|XP_006352864.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...   199   2e-48
ref|XP_002879549.1| hypothetical protein ARALYDRAFT_482506 [Arab...   197   7e-48
gb|ESW30286.1| hypothetical protein PHAVU_002G140400g [Phaseolus...   195   3e-47
ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) family protein...   195   3e-47
gb|AFK48727.1| unknown [Lotus japonicus]                              194   8e-47
ref|XP_003534278.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop...   193   1e-46
ref|XP_006294626.1| hypothetical protein CARUB_v10023663mg [Caps...   193   1e-46

>ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic [Vitis vinifera]
          Length = 288

 Score =  245 bits (626), Expect = 2e-62
 Identities = 139/266 (52%), Positives = 176/266 (66%), Gaps = 1/266 (0%)
 Frame = -2

Query: 1179 EIIMVIATMEAIARTSILFPHLLPKFQPKSSFSHIHLHIPNSTLSFPLKFPL-YTSTTPL 1003
            E  + I ++   + + +LF H      P S   H    IP+  L +PL +PL    T P 
Sbjct: 5    EASLSIFSLYRSSSSKLLFSHR----PPPSMSLHSSAFIPSICLKYPL-YPLPLLYTNPT 59

Query: 1002 TKPTFELKSSLEGVALEEIPNETKDEIVKNKLYVVNLPWTLSSDELKSLFSECGTVKDVE 823
            TK +FEL SS++ + +E  P +T++   K KL+V+NLPW+LS  ++K+LF ECGTV DVE
Sbjct: 60   TKFSFELCSSVQEIEVEAKPEQTQEPNQKRKLFVLNLPWSLSVVDIKNLFGECGTVTDVE 119

Query: 822  LIKNKNGRNRGFGFVTMGSDDEAQAAIDKFNSKELSGRIIRVEFANGLKKXXXXXXXXXP 643
            +IK K+GR+RG+ FVTM S +EAQA ++KF+S ELSGRIIRVEFA   KK          
Sbjct: 120  IIKQKDGRSRGYAFVTMDSGEEAQAVVEKFDSYELSGRIIRVEFAKRFKKPSPPPPPPPA 179

Query: 642  TVSVKETRHKLYVSNLQWKVRSTHLREFFSSNFNPVSVRVIFKNSPXXXXXXXXXXXXXS 463
                 ETRHKLYVSNL WKVRSTHLREFFSSNFNPVSVRV+F +SP             +
Sbjct: 180  GPPAGETRHKLYVSNLAWKVRSTHLREFFSSNFNPVSVRVVF-DSPSGRSGGYGFASFAT 238

Query: 462  REEAEAAISTLDGQELLGRPVRLKFS 385
            +EEAEAAIS LDG+EL+GRPV LKFS
Sbjct: 239  KEEAEAAISALDGKELMGRPVHLKFS 264


>emb|CBI33876.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  242 bits (617), Expect = 3e-61
 Identities = 132/233 (56%), Positives = 163/233 (69%), Gaps = 1/233 (0%)
 Frame = -2

Query: 1080 HIHLHIPNSTLSFPLKFPL-YTSTTPLTKPTFELKSSLEGVALEEIPNETKDEIVKNKLY 904
            H    IP+  L +PL +PL    T P TK +FEL SS++ + +E  P +T++   K KL+
Sbjct: 4    HSSAFIPSICLKYPL-YPLPLLYTNPTTKFSFELCSSVQEIEVEAKPEQTQEPNQKRKLF 62

Query: 903  VVNLPWTLSSDELKSLFSECGTVKDVELIKNKNGRNRGFGFVTMGSDDEAQAAIDKFNSK 724
            V+NLPW+LS  ++K+LF ECGTV DVE+IK K+GR+RG+ FVTM S +EAQA ++KF+S 
Sbjct: 63   VLNLPWSLSVVDIKNLFGECGTVTDVEIIKQKDGRSRGYAFVTMDSGEEAQAVVEKFDSY 122

Query: 723  ELSGRIIRVEFANGLKKXXXXXXXXXPTVSVKETRHKLYVSNLQWKVRSTHLREFFSSNF 544
            ELSGRIIRVEFA   KK               ETRHKLYVSNL WKVRSTHLREFFSSNF
Sbjct: 123  ELSGRIIRVEFAKRFKKPSPPPPPPPAGPPAGETRHKLYVSNLAWKVRSTHLREFFSSNF 182

Query: 543  NPVSVRVIFKNSPXXXXXXXXXXXXXSREEAEAAISTLDGQELLGRPVRLKFS 385
            NPVSVRV+F +SP             ++EEAEAAIS LDG+EL+GRPV LKFS
Sbjct: 183  NPVSVRVVF-DSPSGRSGGYGFASFATKEEAEAAISALDGKELMGRPVHLKFS 234


>ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
            gi|223532973|gb|EEF34739.1| ribonucleoprotein,
            chloroplast, putative [Ricinus communis]
          Length = 278

 Score =  227 bits (579), Expect = 7e-57
 Identities = 136/268 (50%), Positives = 169/268 (63%), Gaps = 6/268 (2%)
 Frame = -2

Query: 1164 IATMEAIARTSILFPHLLPKFQPKSSFSHIHLHI------PNSTLSFPLKFPLYTSTTPL 1003
            +A MEA    S+  PH  P    KS  S   +++       NS       F L       
Sbjct: 1    MAAMEAAV--SLFLPH--PSSSSKSLLSPTFINLFKHKCRSNSIPLLSHNFSLSNIHLTA 56

Query: 1002 TKPTFELKSSLEGVALEEIPNETKDEIVKNKLYVVNLPWTLSSDELKSLFSECGTVKDVE 823
             K +FE  S+ + +    IP ET++   K KLYV NLPW+LS  ++K+LF +CGTV DVE
Sbjct: 57   RKLSFERFSTAQEIM---IPEETQETTQKRKLYVFNLPWSLSVVDIKNLFGQCGTVTDVE 113

Query: 822  LIKNKNGRNRGFGFVTMGSDDEAQAAIDKFNSKELSGRIIRVEFANGLKKXXXXXXXXXP 643
            +IK KNGR+RGF FVT+ S +EAQAAIDK +S E+SGRIIRVEFA  LK           
Sbjct: 114  IIKQKNGRSRGFAFVTLASGEEAQAAIDKLDSHEVSGRIIRVEFAKRLKPPSPPSPTG-- 171

Query: 642  TVSVKETRHKLYVSNLQWKVRSTHLREFFSSNFNPVSVRVIFKNSPXXXXXXXXXXXXXS 463
              S +ETRHK+YVSNL WKVRSTHLREFFS+NF+PVS RV+F +SP             +
Sbjct: 172  -TSARETRHKIYVSNLAWKVRSTHLREFFSTNFSPVSSRVVF-DSPTGRSSGYGFVSFAT 229

Query: 462  REEAEAAISTLDGQELLGRPVRLKFSDQ 379
            REEAEAAIS LDG+EL+GRP+RLKFSD+
Sbjct: 230  REEAEAAISALDGKELMGRPLRLKFSDR 257


>gb|ABK96729.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 294

 Score =  219 bits (559), Expect = 1e-54
 Identities = 126/245 (51%), Positives = 161/245 (65%), Gaps = 6/245 (2%)
 Frame = -2

Query: 1098 PKSSFSHIHLHIPNST--LSFPLKFPLYTSTTPLTKPT-FELKSSLEGVALEEIPNETK- 931
            PKS    ++LHI N T  +S     P  T   P +K   F+L S+++ V +E  P E + 
Sbjct: 28   PKSPPLSLNLHISNPTPLISHNFPQPSLTQNHPRSKSLCFQLCSTVQEVTMEITPEEEEI 87

Query: 930  -DEIVKNKLYVVNLPWTLSSDELKSLFSECGTVKDVELIKNKNGRNRGFGFVTMGSDDEA 754
             +  +K KL+VVNLPW+ S  ++K LF +CGTV DVE+IK KNGR+RGF FVTM + +EA
Sbjct: 88   QEANLKRKLFVVNLPWSFSVVDIKDLFGQCGTVSDVEIIKQKNGRSRGFAFVTMTTGEEA 147

Query: 753  QAAIDKFNSKELSGRIIRVEFANGLKKXXXXXXXXXPT-VSVKETRHKLYVSNLQWKVRS 577
            QAAIDKFNS E+SGRIIRVEFA  L++         P  +   ETRHKLY+SNL WKVR 
Sbjct: 148  QAAIDKFNSLEVSGRIIRVEFAKRLRRPPSPRLPGTPADIPAGETRHKLYISNLAWKVRG 207

Query: 576  THLREFFSSNFNPVSVRVIFKNSPXXXXXXXXXXXXXSREEAEAAISTLDGQELLGRPVR 397
            +HLREFFS+N NPVS RV+F + P             +REEA AAIS   G+EL+GRP+R
Sbjct: 208  SHLREFFSTNCNPVSSRVVF-DGPAGRSSGYGFVSFATREEAVAAISAFSGKELMGRPIR 266

Query: 396  LKFSD 382
            LKFS+
Sbjct: 267  LKFSE 271


>ref|XP_002326529.1| predicted protein [Populus trichocarpa]
            gi|566146773|ref|XP_006368391.1| 33 kDa ribonucleoprotein
            [Populus trichocarpa] gi|550346304|gb|ERP64960.1| 33 kDa
            ribonucleoprotein [Populus trichocarpa]
          Length = 294

 Score =  219 bits (558), Expect = 2e-54
 Identities = 126/245 (51%), Positives = 161/245 (65%), Gaps = 6/245 (2%)
 Frame = -2

Query: 1098 PKSSFSHIHLHIPNST--LSFPLKFPLYTSTTPLTKPT-FELKSSLEGVALEEIPNETK- 931
            PKS    ++LHI N T  +S     P  T   P +K   F+L S+++ V +E  P E + 
Sbjct: 28   PKSPPLSLNLHISNPTPLISHNFPQPSLTQNHPRSKSLCFQLCSTVQEVTVEITPEEEEI 87

Query: 930  -DEIVKNKLYVVNLPWTLSSDELKSLFSECGTVKDVELIKNKNGRNRGFGFVTMGSDDEA 754
             +  +K KL+VVNLPW+ S  ++K LF +CGTV DVE+IK KNGR+RGF FVTM + +EA
Sbjct: 88   QEANLKRKLFVVNLPWSFSVVDIKDLFGQCGTVSDVEIIKQKNGRSRGFAFVTMTTGEEA 147

Query: 753  QAAIDKFNSKELSGRIIRVEFANGLKKXXXXXXXXXPT-VSVKETRHKLYVSNLQWKVRS 577
            QAAIDKFNS E+SGRIIRVEFA  L++         P  +   ETRHKLY+SNL WKVR 
Sbjct: 148  QAAIDKFNSLEVSGRIIRVEFAKRLRRPPSPRLPGTPADIPAGETRHKLYISNLAWKVRG 207

Query: 576  THLREFFSSNFNPVSVRVIFKNSPXXXXXXXXXXXXXSREEAEAAISTLDGQELLGRPVR 397
            +HLREFFS+N NPVS RV+F + P             +REEA AAIS   G+EL+GRP+R
Sbjct: 208  SHLREFFSTNCNPVSSRVVF-DGPAGRSSGYGFVSFATREEAVAAISAFSGKELMGRPIR 266

Query: 396  LKFSD 382
            LKFS+
Sbjct: 267  LKFSE 271


>ref|XP_006428430.1| hypothetical protein CICLE_v10012439mg [Citrus clementina]
            gi|567871683|ref|XP_006428431.1| hypothetical protein
            CICLE_v10012439mg [Citrus clementina]
            gi|567871685|ref|XP_006428432.1| hypothetical protein
            CICLE_v10012439mg [Citrus clementina]
            gi|568877400|ref|XP_006491727.1| PREDICTED:
            ribonucleoprotein At2g37220, chloroplastic-like isoform
            X1 [Citrus sinensis] gi|568877402|ref|XP_006491728.1|
            PREDICTED: ribonucleoprotein At2g37220,
            chloroplastic-like isoform X2 [Citrus sinensis]
            gi|568877404|ref|XP_006491729.1| PREDICTED:
            ribonucleoprotein At2g37220, chloroplastic-like isoform
            X3 [Citrus sinensis] gi|557530487|gb|ESR41670.1|
            hypothetical protein CICLE_v10012439mg [Citrus
            clementina] gi|557530488|gb|ESR41671.1| hypothetical
            protein CICLE_v10012439mg [Citrus clementina]
            gi|557530489|gb|ESR41672.1| hypothetical protein
            CICLE_v10012439mg [Citrus clementina]
          Length = 275

 Score =  216 bits (550), Expect = 2e-53
 Identities = 122/264 (46%), Positives = 167/264 (63%), Gaps = 2/264 (0%)
 Frame = -2

Query: 1164 IATMEAIARTSIL--FPHLLPKFQPKSSFSHIHLHIPNSTLSFPLKFPLYTSTTPLTKPT 991
            +A +EA A +  L  +P       PK       LH  NST S    FP            
Sbjct: 1    MAALEAAATSIFLTNYPFSFSCLFPKLPHCIKLLHSSNSTPSLIYNFPT-------RNVC 53

Query: 990  FELKSSLEGVALEEIPNETKDEIVKNKLYVVNLPWTLSSDELKSLFSECGTVKDVELIKN 811
             ++ S+L+   ++  P +T+ + ++ K+YV NLPW+ S  E+K+LF+ CGTV DVE+IK+
Sbjct: 54   LQVCSTLQDTTVQTKPEQTQKQNIRRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIKH 113

Query: 810  KNGRNRGFGFVTMGSDDEAQAAIDKFNSKELSGRIIRVEFANGLKKXXXXXXXXXPTVSV 631
            K G+NR F FVTM S +EAQAA+++F+++E+SGRIIRVEFA   KK          +   
Sbjct: 114  KGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKK---PRPQRSASAPA 170

Query: 630  KETRHKLYVSNLQWKVRSTHLREFFSSNFNPVSVRVIFKNSPXXXXXXXXXXXXXSREEA 451
            +ET+HKLYVSNL WKVRSTHLREFFS+NFNPVS +V+F+ S              ++EEA
Sbjct: 171  RETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFE-SNEGRSAGYGFVSFATKEEA 229

Query: 450  EAAISTLDGQELLGRPVRLKFSDQ 379
            EAAIS+LDG+EL+GRP+RLKF  +
Sbjct: 230  EAAISSLDGKELMGRPLRLKFGQK 253


>ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
            sativus]
          Length = 288

 Score =  213 bits (542), Expect = 1e-52
 Identities = 118/234 (50%), Positives = 154/234 (65%), Gaps = 10/234 (4%)
 Frame = -2

Query: 1050 LSFPLKFPLYTSTTPLTKPTFE----------LKSSLEGVALEEIPNETKDEIVKNKLYV 901
            +SF         TTP++  +F           L S+L+ V LEE   E +D   K KLY+
Sbjct: 39   ISFSSPLLSLNPTTPISPTSFNSSRNRGGGARLCSALQEVTLEEASEENQDVNQKRKLYI 98

Query: 900  VNLPWTLSSDELKSLFSECGTVKDVELIKNKNGRNRGFGFVTMGSDDEAQAAIDKFNSKE 721
             NLPW+LS  ++K LF +CGTV DVE+IK KNGR+RGF FVTM S DEAQAAI KF+S+E
Sbjct: 99   FNLPWSLSVVDIKELFGQCGTVSDVEIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQE 158

Query: 720  LSGRIIRVEFANGLKKXXXXXXXXXPTVSVKETRHKLYVSNLQWKVRSTHLREFFSSNFN 541
            +SGR+I+VEFA  LKK         P     ET +KLYVSNL WKVRS +LR+FFS NFN
Sbjct: 159  ISGRVIKVEFAKRLKKPPPPKPPGPPP---GETVNKLYVSNLAWKVRSNNLRDFFSENFN 215

Query: 540  PVSVRVIFKNSPXXXXXXXXXXXXXSREEAEAAISTLDGQELLGRPVRLKFSDQ 379
            P++ RV+F +SP             +REEA+ A+S+L+G+EL+GRP+RLKFS++
Sbjct: 216  PIAARVVF-DSPAGRSAGYGFVSFATREEAQTALSSLEGKELMGRPLRLKFSER 268


>ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like [Cucumis
            sativus]
          Length = 282

 Score =  213 bits (542), Expect = 1e-52
 Identities = 118/234 (50%), Positives = 154/234 (65%), Gaps = 10/234 (4%)
 Frame = -2

Query: 1050 LSFPLKFPLYTSTTPLTKPTFE----------LKSSLEGVALEEIPNETKDEIVKNKLYV 901
            +SF         TTP++  +F           L S+L+ V LEE   E +D   K KLY+
Sbjct: 33   ISFSSPLLSLNPTTPISPTSFNSSRNRGGGARLCSALQEVTLEEASEENQDVNQKRKLYI 92

Query: 900  VNLPWTLSSDELKSLFSECGTVKDVELIKNKNGRNRGFGFVTMGSDDEAQAAIDKFNSKE 721
             NLPW+LS  ++K LF +CGTV DVE+IK KNGR+RGF FVTM S DEAQAAI KF+S+E
Sbjct: 93   FNLPWSLSVVDIKELFGQCGTVSDVEIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQE 152

Query: 720  LSGRIIRVEFANGLKKXXXXXXXXXPTVSVKETRHKLYVSNLQWKVRSTHLREFFSSNFN 541
            +SGR+I+VEFA  LKK         P     ET +KLYVSNL WKVRS +LR+FFS NFN
Sbjct: 153  ISGRVIKVEFAKRLKKPPPPKPPGPPP---GETVNKLYVSNLAWKVRSNNLRDFFSENFN 209

Query: 540  PVSVRVIFKNSPXXXXXXXXXXXXXSREEAEAAISTLDGQELLGRPVRLKFSDQ 379
            P++ RV+F +SP             +REEA+ A+S+L+G+EL+GRP+RLKFS++
Sbjct: 210  PIAARVVF-DSPAGRSAGYGFVSFATREEAQTALSSLEGKELMGRPLRLKFSER 262


>gb|EMJ10617.1| hypothetical protein PRUPE_ppa009362mg [Prunus persica]
          Length = 295

 Score =  207 bits (528), Expect = 5e-51
 Identities = 136/315 (43%), Positives = 181/315 (57%), Gaps = 18/315 (5%)
 Frame = -2

Query: 1164 IATMEAIARTSILFPHLLPKFQ------PKSSFSHIHLHIPNSTLSFPLKFPLYTS---- 1015
            +A  EA    S L+      +       PK S S + LHI NS       F LY+S    
Sbjct: 1    MAAFEAALSVSSLYSSSFSSYSSKFFASPKPSTS-LKLHISNSIPPISRNF-LYSSPPCI 58

Query: 1014 -TTPLTKPTFELKSSL------EGVALEEIPNETKDEIVKNKLYVVNLPWTLSSDELKSL 856
               P  KP FEL  S       E  A+EE   ET+ + +K KLYVVNLPW+L+  ++K+L
Sbjct: 59   LNNPTRKPFFELMCSAVQEVTAEEEAVEEKAEETQTQNLKRKLYVVNLPWSLTVVDIKNL 118

Query: 855  FSECGTVKDVELIKNKNGRNRGFGFVTMGSDDEAQAAIDKFNSKELSGRIIRVEFANGLK 676
            F ECGTV DVE+IK  NG++RGF FVTM S +EAQA I+KF+S E+  R IRVEFA   K
Sbjct: 119  FGECGTVTDVEIIKQPNGKSRGFAFVTMASGEEAQAVIEKFHSHEVLDRTIRVEFAKQFK 178

Query: 675  KXXXXXXXXXPTVSVKETRHKLYVSNLQWKVRSTHLREFFSSNFN-PVSVRVIFKNSPXX 499
            K         P   + ETR+KLYVSNL WKVRS+HLR+F S NF  PVS RV+F + P  
Sbjct: 179  K----PSPPPPNPQIVETRYKLYVSNLGWKVRSSHLRDFVSENFKVPVSARVVF-SGPSG 233

Query: 498  XXXXXXXXXXXSREEAEAAISTLDGQELLGRPVRLKFSDQXXXXXXXXXXXEKYNSEKSA 319
                       ++EEAE+AIS+L+G+EL+GRP+ LKFS++               +++++
Sbjct: 234  KSGGYGFLSFATKEEAESAISSLNGKELMGRPLNLKFSEK---------------NDRNS 278

Query: 318  GVADEKEASDEDQPD 274
            G   ++E   E QP+
Sbjct: 279  GSQKDEEEKFEGQPE 293


>gb|EXB32996.1| 31 kDa ribonucleoprotein [Morus notabilis]
          Length = 295

 Score =  205 bits (522), Expect = 3e-50
 Identities = 127/273 (46%), Positives = 165/273 (60%), Gaps = 11/273 (4%)
 Frame = -2

Query: 1164 IATMEAIARTSI-LFPHLLPKFQPKSSFSHIHLHIPNSTLSFPLKFPLYTSTTPLTKPT- 991
            +A +EA+    + L     P     SS S   L  P  T +  LK     S + L   T 
Sbjct: 1    MAALEAVLSLRLCLLYSSSPSSSSSSSLSTTKLSFPR-TRTHSLKLHSANSCSFLQSSTR 59

Query: 990  ----FELKSSLEG--VALEEIPNET---KDEIVKNKLYVVNLPWTLSSDELKSLFSECGT 838
                F L  S++   +A++E   ET   K+   K KLYVVNLPW+L+  ++KSLF +CGT
Sbjct: 60   NPWSFRLCFSVQEQEIAVQEKAEETHLEKENNQKRKLYVVNLPWSLTVVDIKSLFGQCGT 119

Query: 837  VKDVELIKNKNGRNRGFGFVTMGSDDEAQAAIDKFNSKELSGRIIRVEFANGLKKXXXXX 658
            V DVE+IK K+GRNRGF FVTM   +EAQA ID+FN +++SGRII++E A   KK     
Sbjct: 120  VTDVEIIKQKDGRNRGFAFVTMACGEEAQAVIDRFNLQDVSGRIIKIELAKQFKKPSPPR 179

Query: 657  XXXXPTVSVKETRHKLYVSNLQWKVRSTHLREFFSSNFNPVSVRVIFKNSPXXXXXXXXX 478
                      ET HKLYVSN++WKVRSTHLR+F S NF PVS RV+F + P         
Sbjct: 180  PPGP---QPGETTHKLYVSNIEWKVRSTHLRDFVSENFKPVSARVVF-DGPKGRSAGYGF 235

Query: 477  XXXXSREEAEAAISTLDGQELLGRPVRLKFSDQ 379
                +REEAEAAIS+LDG+EL+GRP+RLKFS++
Sbjct: 236  VSFATREEAEAAISSLDGKELMGRPLRLKFSEK 268


>ref|XP_004245902.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Solanum
            lycopersicum]
          Length = 285

 Score =  202 bits (513), Expect = 3e-49
 Identities = 117/238 (49%), Positives = 154/238 (64%), Gaps = 5/238 (2%)
 Frame = -2

Query: 1077 IHLHIPNSTLSFPLKFPLYTSTTPLTKPTFELK-SSLEGVALEEIPNETKDEIVKN---- 913
            I L   N +L+  LK  LY    P  K   +L  S++E      +  E  ++  KN    
Sbjct: 31   IKLQNYNHSLNLSLKSILYPLPLPSRKQCTQLHCSAVEVTEPVTVQEEKTEKPQKNNQRR 90

Query: 912  KLYVVNLPWTLSSDELKSLFSECGTVKDVELIKNKNGRNRGFGFVTMGSDDEAQAAIDKF 733
            KL+V+NLPW+L+  ++K++F+ECG V DVE+IK K+G++RGF FVTM S +EAQAAIDK 
Sbjct: 91   KLFVLNLPWSLTVADIKNIFAECGIVDDVEIIKTKDGKSRGFAFVTMSSGEEAQAAIDKL 150

Query: 732  NSKELSGRIIRVEFANGLKKXXXXXXXXXPTVSVKETRHKLYVSNLQWKVRSTHLREFFS 553
            +S E+SGRIIRVEFA   KK          T    E RHKLYVSNL WKVRST LREFFS
Sbjct: 151  DSYEVSGRIIRVEFAKRFKK--PPGAPPPSTPPQGEARHKLYVSNLAWKVRSTQLREFFS 208

Query: 552  SNFNPVSVRVIFKNSPXXXXXXXXXXXXXSREEAEAAISTLDGQELLGRPVRLKFSDQ 379
            +N NP+S RV+F N+              ++E+AEAA+S LDG+EL+GRP+RLKFS++
Sbjct: 209  ANNNPISARVVFDNA-SGRAAGYGFVTFDTKEQAEAALSALDGKELMGRPIRLKFSER 265


>ref|XP_004301780.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Fragaria
            vesca subsp. vesca]
          Length = 299

 Score =  200 bits (509), Expect = 9e-49
 Identities = 131/286 (45%), Positives = 165/286 (57%), Gaps = 4/286 (1%)
 Frame = -2

Query: 1113 LPKFQPKSSFSHIHLH---IPNSTLSFPLKFPLYTSTTPLTKPTFELKSSLEGVALEEIP 943
            LP F P  S + +      IP   LSF L        T   +   E +S+ E        
Sbjct: 32   LPSFIPPISHNFLLSSPPLIPARKLSFELLCSAVQEITTQEEEQAEQESAEE-------- 83

Query: 942  NETKDEIVKNKLYVVNLPWTLSSDELKSLFSECGTVKDVELIKNKNGRNRGFGFVTMGSD 763
               K + +K KLYVVNLPW+L+  ++K+LF +CG VKDVE+IK  +GRNRGF FVTM S 
Sbjct: 84   KTQKQQNLKRKLYVVNLPWSLTVADIKTLFGQCGHVKDVEIIKQMDGRNRGFAFVTMASG 143

Query: 762  DEAQAAIDKFNSKELSGRIIRVEFANGLKKXXXXXXXXXPTVSVKETRHKLYVSNLQWKV 583
            +EAQA IDKF+S+ELSGR ++VEFA   KK          T  V+ETR+KLYVSNL WK 
Sbjct: 144  EEAQAVIDKFDSQELSGRTVKVEFAKQFKK----PTPRPSTPKVQETRYKLYVSNLAWKA 199

Query: 582  RSTHLREFFSSNF-NPVSVRVIFKNSPXXXXXXXXXXXXXSREEAEAAISTLDGQELLGR 406
            RS+HLR+F S NF  PVS RV+F + P               EEAE AIS L+GQEL+GR
Sbjct: 200  RSSHLRDFVSLNFKTPVSARVVF-DGPSGKSVGYGFVSFARMEEAEEAISALNGQELMGR 258

Query: 405  PVRLKFSDQXXXXXXXXXXXEKYNSEKSAGVADEKEASDEDQPDVS 268
            PV LKFS++           EK NS +   V +EK    E+QP+ S
Sbjct: 259  PVTLKFSEK--NIGESTNQEEKDNSNQEEKVEEEKL---ENQPEES 299


>gb|EOY23975.1| RNA-binding family protein isoform 1 [Theobroma cacao]
          Length = 281

 Score =  200 bits (508), Expect = 1e-48
 Identities = 112/218 (51%), Positives = 148/218 (67%)
 Frame = -2

Query: 1032 FPLYTSTTPLTKPTFELKSSLEGVALEEIPNETKDEIVKNKLYVVNLPWTLSSDELKSLF 853
            F + + T    KP F L S+++ V +E    +T+   VK KL+V+NLPW+ +  ++K LF
Sbjct: 49   FFISSLTNSRKKPGFLLCSTVQEVNVEAETEKTQKSNVKRKLFVLNLPWSYTVADIKDLF 108

Query: 852  SECGTVKDVELIKNKNGRNRGFGFVTMGSDDEAQAAIDKFNSKELSGRIIRVEFANGLKK 673
             +CG V DVE+IK K+GR+R F FVTM S +EAQAA+DK +S E+S RIIRVEFA   KK
Sbjct: 109  GQCGNVTDVEIIKQKDGRSRNFAFVTMASGEEAQAAVDKLDSHEVSARIIRVEFARRFKK 168

Query: 672  XXXXXXXXXPTVSVKETRHKLYVSNLQWKVRSTHLREFFSSNFNPVSVRVIFKNSPXXXX 493
                     P V  +ET HKLYVSNL WKVRS+HLREFFS+ FNPV+ RVIF  +P    
Sbjct: 169  ---PSPSPQPIVPPRETHHKLYVSNLAWKVRSSHLREFFSA-FNPVAARVIF-GTPSGQS 223

Query: 492  XXXXXXXXXSREEAEAAISTLDGQELLGRPVRLKFSDQ 379
                     ++EEA+AAISTL+G+EL+ RP+RLKFS++
Sbjct: 224  AGYGFVSFATKEEADAAISTLNGKELMDRPLRLKFSER 261


>ref|XP_006352864.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Solanum
            tuberosum]
          Length = 284

 Score =  199 bits (506), Expect = 2e-48
 Identities = 115/253 (45%), Positives = 155/253 (61%), Gaps = 25/253 (9%)
 Frame = -2

Query: 1062 PNSTLSFPLKFPLYTSTTPLTKPTFELKSSLEG-------------------------VA 958
            P S+ S+ LKFPL+ ++  L      L  SL+                          V 
Sbjct: 16   PPSSSSY-LKFPLFPNSIKLQNSNHSLNLSLKSILPLLSRKQCSQLHCSAVEVTEPVTVQ 74

Query: 957  LEEIPNETKDEIVKNKLYVVNLPWTLSSDELKSLFSECGTVKDVELIKNKNGRNRGFGFV 778
             EE   + +   ++ KL+V+NLPW+L+  ++K++F+ECG V DVE+IK ++G++RGF FV
Sbjct: 75   EEEKTEKPQKNNLRRKLFVLNLPWSLTVPDIKNIFAECGIVDDVEIIKTEDGKSRGFAFV 134

Query: 777  TMGSDDEAQAAIDKFNSKELSGRIIRVEFANGLKKXXXXXXXXXPTVSVKETRHKLYVSN 598
            TM S +EAQAAIDK +S E+ GRIIRVEFA   KK          T    E RHKLYVSN
Sbjct: 135  TMSSGEEAQAAIDKLDSYEVLGRIIRVEFAKRFKK--PPGAPPPSTPPQGEARHKLYVSN 192

Query: 597  LQWKVRSTHLREFFSSNFNPVSVRVIFKNSPXXXXXXXXXXXXXSREEAEAAISTLDGQE 418
            L WKVRST LREFFS+N+NP+S RVIF N+              ++E+AEAA+S LDG+E
Sbjct: 193  LAWKVRSTQLREFFSANYNPISARVIFDNA-SGRAAGYGFVSFDTKEQAEAAVSALDGKE 251

Query: 417  LLGRPVRLKFSDQ 379
            L+GRP+RLKFS++
Sbjct: 252  LMGRPIRLKFSER 264


>ref|XP_002879549.1| hypothetical protein ARALYDRAFT_482506 [Arabidopsis lyrata subsp.
           lyrata] gi|297325388|gb|EFH55808.1| hypothetical protein
           ARALYDRAFT_482506 [Arabidopsis lyrata subsp. lyrata]
          Length = 308

 Score =  197 bits (501), Expect = 7e-48
 Identities = 107/232 (46%), Positives = 146/232 (62%), Gaps = 1/232 (0%)
 Frame = -2

Query: 978 SSLEGVALEEIPNETKDEIVKNKLYVVNLPWTLSSDELKSLFSECGTVKDVELIKNKNGR 799
           S+ E  + EE   ET+   +K KL+V NLPW++S +++  LF +CGTV +VE+I+ K+G+
Sbjct: 74  SAEEETSQEEKTEETQKSNLKRKLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQKDGK 133

Query: 798 NRGFGFVTMGSDDEAQAAIDKFNSKELSGRIIRVEFANGLKKXXXXXXXXXPTVSVKETR 619
           NRGF FVTM S +EAQAAIDKF++ ++SGRII V FA   KK         P+    +TR
Sbjct: 134 NRGFAFVTMASGEEAQAAIDKFDTSQVSGRIISVNFARRFKKPTPKPPNDLPSPPPGDTR 193

Query: 618 HKLYVSNLQWKVRSTHLREFF-SSNFNPVSVRVIFKNSPXXXXXXXXXXXXXSREEAEAA 442
           HKLYVSNL WK RSTHLRE F +S+FNPVS RV+F + P             +REEAE A
Sbjct: 194 HKLYVSNLAWKARSTHLRELFTASDFNPVSARVVFAD-PEGRSSGYGFVSFATREEAEDA 252

Query: 441 ISTLDGQELLGRPVRLKFSDQXXXXXXXXXXXEKYNSEKSAGVADEKEASDE 286
           I+ LDG+E++GRP+ LKFS +              N+ +     ++K  S+E
Sbjct: 253 IAKLDGKEIMGRPIILKFSLRSASESEDGDTVGDNNTSEDGDTVEDKNTSEE 304


>gb|ESW30286.1| hypothetical protein PHAVU_002G140400g [Phaseolus vulgaris]
          Length = 290

 Score =  195 bits (496), Expect = 3e-47
 Identities = 108/230 (46%), Positives = 143/230 (62%), Gaps = 1/230 (0%)
 Frame = -2

Query: 954 EEIPNETKDEIVKNKLYVVNLPWTLSSDELKSLFSECGTVKDVELIKNKNGRNRGFGFVT 775
           E+ P  T+      KLYV NL W+LS  ++K +F++CGTV DVE+I+N+ GR+ G+ FVT
Sbjct: 66  EKTPGPTQPTDNLTKLYVANLSWSLSPADIKGIFAQCGTVTDVEIIRNRKGRHMGYAFVT 125

Query: 774 MGSDDEAQAAIDKFNSKELSGRIIRVEFANGLKKXXXXXXXXXPTVSVKETRHKLYVSNL 595
           M S +EAQ A+DKF+S ELSGRIIRVE A   KK         P    +ETRH LYVSNL
Sbjct: 126 MDSGEEAQVAVDKFDSSELSGRIIRVELAKTFKKPPPPPPPPPPPPQPRETRHVLYVSNL 185

Query: 594 QWKVRSTHLREFFSSNF-NPVSVRVIFKNSPXXXXXXXXXXXXXSREEAEAAISTLDGQE 418
            WK RSTHLR+ F+ NF  PVS RV+F +SP             ++E+AEAAIS +DG+E
Sbjct: 186 AWKARSTHLRQVFTENFKTPVSARVVF-DSPAKRSAGYGFVSFLTKEDAEAAISNVDGKE 244

Query: 417 LLGRPVRLKFSDQXXXXXXXXXXXEKYNSEKSAGVADEKEASDEDQPDVS 268
           ++GRP+RL FS++            +  SEK      + E+ DEDQ  V+
Sbjct: 245 IMGRPLRLSFSEK---------KDNEAGSEKEEDQIKDAESEDEDQGSVA 285


>ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
           thaliana] gi|3608147|gb|AAC36180.1| putative chloroplast
           RNA binding protein precursor [Arabidopsis thaliana]
           gi|14596023|gb|AAK68739.1| putative chloroplast RNA
           binding protein precursor [Arabidopsis thaliana]
           gi|23198314|gb|AAN15684.1| putative chloroplast RNA
           binding protein precursor [Arabidopsis thaliana]
           gi|330254012|gb|AEC09106.1| RNA-binding (RRM/RBD/RNP
           motifs) family protein [Arabidopsis thaliana]
          Length = 308

 Score =  195 bits (496), Expect = 3e-47
 Identities = 106/233 (45%), Positives = 150/233 (64%), Gaps = 1/233 (0%)
 Frame = -2

Query: 978 SSLEGVALEEIPNETKDEIVKNKLYVVNLPWTLSSDELKSLFSECGTVKDVELIKNKNGR 799
           S+ E  + EE   ET++  +K KL+V NLPW++S +++  LF +CGTV +VE+I+ K+G+
Sbjct: 74  SADEETSQEEKTEETQNSNLKRKLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQKDGK 133

Query: 798 NRGFGFVTMGSDDEAQAAIDKFNSKELSGRIIRVEFANGLKKXXXXXXXXXPTVSVKETR 619
           NRGF FVTM S +EAQAAIDKF++ ++SGRII V FA   KK         P+ +  +TR
Sbjct: 134 NRGFAFVTMASGEEAQAAIDKFDTFQVSGRIISVSFARRFKKPTPKSPNDLPSPAPGDTR 193

Query: 618 HKLYVSNLQWKVRSTHLREFF-SSNFNPVSVRVIFKNSPXXXXXXXXXXXXXSREEAEAA 442
           HKLYVSNL WK RSTHLRE F +++FNPVS RV+F + P             +REEAE A
Sbjct: 194 HKLYVSNLAWKARSTHLRELFTAADFNPVSARVVFAD-PEGRSSGYGFVSFATREEAENA 252

Query: 441 ISTLDGQELLGRPVRLKFSDQXXXXXXXXXXXEKYNSEKSAGVADEKEASDED 283
           I+ L+G+E++GRP+ LKFS +           E  N+ +     ++K  S+E+
Sbjct: 253 ITKLNGKEIMGRPITLKFSLRSASESEDGDSVEANNASEDGDTVEDKNTSEEN 305


>gb|AFK48727.1| unknown [Lotus japonicus]
          Length = 285

 Score =  194 bits (492), Expect = 8e-47
 Identities = 119/256 (46%), Positives = 161/256 (62%), Gaps = 6/256 (2%)
 Frame = -2

Query: 1128 LFPHLLPKF-QPKSSFSHIHLHIPNSTLSFPLKFPLYTSTTPLTKPTFELKSSLEGVA-- 958
            LFP   P+F +  +S SH H  + +S  S         S TP  KP  +L S+L+ VA  
Sbjct: 21   LFPAKPPEFVKLHASLSHSHNLLFSSNAS---------SKTP--KPCTQLCSALQEVAEA 69

Query: 957  -LEEIPNETKDEI-VKNKLYVVNLPWTLSSDELKSLFSECGTVKDVELIKNKNGRNRGFG 784
              EE P + +    +K KLYV NLPW++S+ ++K LF +CGTV DVE+I+ K+GR +G+ 
Sbjct: 70   ATEEEPEQDQQATYIKKKLYVFNLPWSMSAADIKDLFGQCGTVTDVEIIRGKDGRGKGYA 129

Query: 783  FVTMGSDDEAQAAIDKFNSKELSGRIIRVEFANGLKKXXXXXXXXXPTVSVKETRHKLYV 604
            FVTM S +EAQAA+DKF++ ELSGRI+RVE A   KK         P+    E RH +Y 
Sbjct: 130  FVTMASGEEAQAAVDKFDTLELSGRILRVELAKRFKK---PSPPGPPSPPPSEARHVIYA 186

Query: 603  SNLQWKVRSTHLREFFSSNFN-PVSVRVIFKNSPXXXXXXXXXXXXXSREEAEAAISTLD 427
            SNL WKVRSTHLREFF+ NF  P+S R++F ++P             ++EEAEAAIS LD
Sbjct: 187  SNLAWKVRSTHLREFFTENFKAPLSARIVF-DTPSGKTTGYGFISYLTKEEAEAAISALD 245

Query: 426  GQELLGRPVRLKFSDQ 379
            G+EL+GR + LK S++
Sbjct: 246  GKELMGRSLFLKISEK 261


>ref|XP_003534278.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Glycine
           max]
          Length = 282

 Score =  193 bits (491), Expect = 1e-46
 Identities = 115/245 (46%), Positives = 156/245 (63%), Gaps = 4/245 (1%)
 Frame = -2

Query: 990 FELKSSLEGVALEEI---PNETKDEIVKNKLYVVNLPWTLSSDELKSLFSECGTVKDVEL 820
           F+L S+L+ VA  E    P +  D +   KLYVVNL W+L++ ++  LF++CGTV DVE+
Sbjct: 47  FQLCSTLQEVAPTEQTLEPIQPTDNV--KKLYVVNLSWSLTAADITDLFAQCGTVTDVEI 104

Query: 819 IKNKNGRNRGFGFVTMGSDDEAQAAIDKFNSKELSGRIIRVEFANGLKKXXXXXXXXXPT 640
           IK+K+GR++G+ FVTM S +EAQAA+DKF+S ELSGRIIRVE A  LKK         P 
Sbjct: 105 IKSKDGRSKGYAFVTMASGEEAQAAVDKFDSYELSGRIIRVELAKRLKKPPSLPPPPGPR 164

Query: 639 VSVKETRHKLYVSNLQWKVRSTHLREFFSSNF-NPVSVRVIFKNSPXXXXXXXXXXXXXS 463
               ETRH +Y SNL WK RSTHLR+ F+ NF  P S RV+F +SP             +
Sbjct: 165 PG--ETRHVIYASNLAWKARSTHLRQVFTENFKTPSSARVVF-DSPSGRSAGYGFVSFLT 221

Query: 462 REEAEAAISTLDGQELLGRPVRLKFSDQXXXXXXXXXXXEKYNSEKSAGVADEKEASDED 283
           RE+AEAAIST+DG+EL+GRP+RLKFS++              +  K AG  ++++   + 
Sbjct: 222 REDAEAAISTVDGKELMGRPLRLKFSEKNKEAGSQNDE----DQIKDAGSEEDEDQGSDA 277

Query: 282 QPDVS 268
           QP+ S
Sbjct: 278 QPEES 282


>ref|XP_006294626.1| hypothetical protein CARUB_v10023663mg [Capsella rubella]
           gi|482563334|gb|EOA27524.1| hypothetical protein
           CARUB_v10023663mg [Capsella rubella]
          Length = 318

 Score =  193 bits (490), Expect = 1e-46
 Identities = 106/233 (45%), Positives = 146/233 (62%), Gaps = 1/233 (0%)
 Frame = -2

Query: 978 SSLEGVALEEIPNETKDEIVKNKLYVVNLPWTLSSDELKSLFSECGTVKDVELIKNKNGR 799
           S+ +  + E+   ET+   +K KL+V NLPW++S  ++  LF +CGTV +VE+I+ K+G+
Sbjct: 73  STEDETSQEDKTEETQKSNLKRKLFVFNLPWSMSVHDISDLFRQCGTVNNVEIIRQKDGK 132

Query: 798 NRGFGFVTMGSDDEAQAAIDKFNSKELSGRIIRVEFANGLKKXXXXXXXXXPTVSVKETR 619
           NRGF FVTM S +EAQAA+DKF++ E+SGRIIRV FA   KK         P+    +TR
Sbjct: 133 NRGFAFVTMASGEEAQAAVDKFDAFEVSGRIIRVNFARRFKKPTPKPPNALPSPPPGDTR 192

Query: 618 HKLYVSNLQWKVRSTHLREFF-SSNFNPVSVRVIFKNSPXXXXXXXXXXXXXSREEAEAA 442
           HKLYVSNL WK RSTHLRE F +++FNPVS RV+F + P             +REEAE A
Sbjct: 193 HKLYVSNLAWKARSTHLRELFTAADFNPVSARVVFAD-PEGRSSGYGFVSFATREEAENA 251

Query: 441 ISTLDGQELLGRPVRLKFSDQXXXXXXXXXXXEKYNSEKSAGVADEKEASDED 283
           I+ LDG+E++GRP+ LKFS             E  N+ K +   ++  + D D
Sbjct: 252 ITKLDGKEIMGRPIILKFSLTTASESEDGDTVEDNNTSKDSDTEEDNTSEDGD 304