BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00003087
         (2507 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA22288.1| polyprotein [Oryza australiensis]                     234   4e-73
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...   226   2e-72
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...   213   7e-69
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc...   209   3e-68
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]     209   3e-68
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]     181   3e-60
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc...   181   4e-60
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...   232   5e-58
emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]        216   3e-53
gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc...   216   5e-53
gb|AAX96621.1| retrotransposon protein, putative, Ty1-copia sub-...   210   3e-51
emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]         144   2e-50
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc...   189   6e-50
ref|XP_004977683.1| PREDICTED: uncharacterized protein LOC101759...   201   1e-48
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...   199   6e-48
emb|CAD40471.2| OSJNBa0067G20.17 [Oryza sativa Japonica Group]        198   1e-47
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]     188   9e-45
ref|XP_006397405.1| hypothetical protein EUTSA_v10022479mg, part...   187   1e-44
ref|XP_006395894.1| hypothetical protein EUTSA_v10005360mg, part...   187   3e-44
gb|AAK52165.1|AC084831_19 putative polyprotein [Oryza sativa Jap...   186   6e-44

>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  234 bits (598), Expect(2) = 4e-73
 Identities = 127/283 (44%), Positives = 172/283 (60%), Gaps = 5/283 (1%)
 Frame = -3

Query: 1182 ANNAYTSNNLRSLLEKEILTGPNFLDWYRILRIVLRLERKDYVXXXXXXXXXLIGSTQAA 1003
            AN   ++ NLRS+LEKE L G NF+DWYR LRIVL+ ERK+YV            +T  A
Sbjct: 3    ANTTPSTFNLRSILEKEKLNGTNFMDWYRNLRIVLKQERKEYVLEVPYPEELPNNATATA 62

Query: 1002 RH--IEHSNDA---SCLMLATMSSDLQKIFENMGAYDTIKQLRTMFQKQARVERFETVQA 838
            R    +H+NDA   SCLMLATMS +LQK +E+  A+ TI+ LR MF+ QAR ERF T ++
Sbjct: 63   RRGFEKHTNDALDISCLMLATMSPELQKQYESSDAHTTIQGLRGMFENQARDERFNTSKS 122

Query: 837  IFDTKLEEGKPVSPHVLKMISHFENIERLGFPFGQELANDILIHSLPKSYDQFKLNYKMQ 658
            +F  +L EG PVSPHV+KMI + E++E+LGFP  QELA D+++ SLP S++ F LNY M 
Sbjct: 123  LFACRLVEGNPVSPHVIKMIGYIESLEKLGFPLSQELATDVILQSLPPSFEPFILNYHMN 182

Query: 657  GVEKNLYELHSMLKVVEVNLERKPKEEVLMVQXXXXXXXXXXXXXXGCQNKDKKVENKKV 478
             +++ L ELH MLK VE +++ K    V+M+Q                   D+       
Sbjct: 183  NMDRTLAELHGMLKTVEESIQ-KNGHHVMMMQNAKRKPPVKKLCTKRKLTPDEIASASNA 241

Query: 477  QTEPKKGPTQDTKCFHCNGNGHWLRNCAKYLEDLKSGKITSNS 349
            +   K     D  CF+C   GHW RNC KY+EDLK  + T+++
Sbjct: 242  KKGKKGSAASDAVCFYCKETGHWKRNCKKYMEDLKKKQSTTSA 284



 Score = 70.1 bits (170), Expect(2) = 4e-73
 Identities = 35/76 (46%), Positives = 51/76 (67%)
 Frame = -1

Query: 353 IQGLQRSKHLARGEVDLRMGTAAKVVVLSLGDFSFSLPSELVLKVNNCYYVLSLSKNIIF 174
           +QG++RS+ L RGEV+LR+G  A V  +++G     LPS LVL++NNCY V +L +N+I 
Sbjct: 316 LQGMRRSRGLRRGEVNLRVGNGASVATVAVGTVPLHLPSGLVLELNNCYCVPTLCQNVIS 375

Query: 173 VSKLAKEGFAFVIKDN 126
            S L  EG+ F   +N
Sbjct: 376 ASCLQAEGYDFRSMNN 391


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  226 bits (576), Expect(2) = 2e-72
 Identities = 127/281 (45%), Positives = 169/281 (60%), Gaps = 11/281 (3%)
 Frame = -3

Query: 1155 LRSLLEKEILTGPNFLDWYRILRIVLRLERKDYVXXXXXXXXXLIGSTQAARHI-----E 991
            LRS+L+KE L G NF DW R LRIVLR ++K++V            +    +       +
Sbjct: 98   LRSILKKEKLNGTNFADWSRNLRIVLRQDKKEHVLEEPIPDVPADNAAATLKSAYKKACD 157

Query: 990  HSNDASCLMLATMSSDLQKIFENMGAYDTIKQLRTMFQKQARVERFETVQAIFDTKLEEG 811
             S D SCLMLA M+SDLQK FEN+ AYD I  L+ MF+ QAR +RFE  + +F  KL EG
Sbjct: 158  ESLDVSCLMLAAMNSDLQKQFENIEAYDMIVALKGMFETQARTKRFEISKNLFSCKLAEG 217

Query: 810  KPVSPHVLKMISHFENIERLGFPFGQELANDILIHSLPKSYDQFKLNYKMQGVEKNLYEL 631
             PVSPH++KM+ + +++E+LGFP  QELA D+++ SLP SY QF LN+ M G++KNL EL
Sbjct: 218  SPVSPHMIKMVGYTQSLEKLGFPLSQELATDLILASLPASYGQFILNFHMNGLDKNLTEL 277

Query: 630  HSMLKVVEVNLERKPKEEVLMVQXXXXXXXXXXXXXXGCQNKDKKV----ENKKVQTEPK 463
            H +LK  E ++ +K    V+MVQ                + K KKV    +  K + + K
Sbjct: 278  HMLLKTAEDSI-KKINSHVMMVQ---KSTSFKKKARTWVKGKGKKVLDGIQTNKPKLKTK 333

Query: 462  KGPTQDTKCFHCNGNGHWLRNCAKYLEDLK--SGKITSNSG 346
             GPTQ+ +CF+C   GHW RNC KYL DLK   G   S SG
Sbjct: 334  SGPTQENECFYCKEPGHWKRNCKKYLADLKKNGGTKPSTSG 374



 Score = 76.3 bits (186), Expect(2) = 2e-72
 Identities = 38/88 (43%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
 Frame = -1

Query: 353 IQGLQRSKHLARGEVDLRMGTAAKVVVLSLGDFSFSLPSELVLKVNNCYYVLSLSKNIIF 174
           +Q L +++ +ARGE+DLR+G  AKV  LS       LPS  ++++NNCYYV ++S+NII 
Sbjct: 404 MQSLTKNRRVARGEMDLRVGNKAKVAALSAETLPLVLPSGFIMELNNCYYVPAMSRNIIS 463

Query: 173 VSKLAKEGFAFVIKDN-CFFPRCDLCFG 93
            S L  EG+ F+I+D+ C     D+ +G
Sbjct: 464 ASCLMTEGYKFIIEDHGCSIFLNDMFYG 491


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
            gi|62701883|gb|AAX92956.1| retrotransposon protein,
            putative, Ty1-copia sub-class [Oryza sativa Japonica
            Group] gi|108864259|gb|ABA92827.2| retrotransposon
            protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1184

 Score =  213 bits (542), Expect(2) = 7e-69
 Identities = 119/288 (41%), Positives = 162/288 (56%), Gaps = 6/288 (2%)
 Frame = -3

Query: 1185 MANNAYTSNNLRSLLEKEILTGPNFLDWYRILRIVLRLERKDYVXXXXXXXXXLIGSTQA 1006
            MA  A +S NLRS+LEKE LTG N +DWYR LRIVLR E K++V            +  A
Sbjct: 1    MAAPAPSSFNLRSILEKEKLTGTNIMDWYRNLRIVLRQEHKEFVLTQPFPADLP-NNAPA 59

Query: 1005 ARHIEHSN------DASCLMLATMSSDLQKIFENMGAYDTIKQLRTMFQKQARVERFETV 844
            A+  EH        D SCLMLATMS +LQ+ +E + A+  I  LR MF+ QAR +RF T 
Sbjct: 60   AQRREHEKRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAKRFNTS 119

Query: 843  QAIFDTKLEEGKPVSPHVLKMISHFENIERLGFPFGQELANDILIHSLPKSYDQFKLNYK 664
            +++F  +L EG PVSPHV+KMI + E +E+LGFP  QELA D+++ SLP S++ F LN+ 
Sbjct: 120  KSLFACRLAEGNPVSPHVIKMIGYNETLEKLGFPLSQELATDLILQSLPPSFEPFILNFN 179

Query: 663  MQGVEKNLYELHSMLKVVEVNLERKPKEEVLMVQXXXXXXXXXXXXXXGCQNKDKKVENK 484
            M  + + L +L  MLK  E ++++     ++M                          +K
Sbjct: 180  MNNMNRTLTKLPGMLKTAEESIKKNSNHVMVM--------------------------HK 213

Query: 483  KVQTEPKKGPTQDTKCFHCNGNGHWLRNCAKYLEDLKSGKITSNSGTA 340
            +     K GP +D +CF C   GHW RNC KYLE LK  +    S T+
Sbjct: 214  RKPNNKKSGPAKDAECFFCKEAGHWKRNCKKYLEQLKQKQQDGKSSTS 261



 Score = 77.4 bits (189), Expect(2) = 7e-69
 Identities = 38/76 (50%), Positives = 53/76 (69%)
 Frame = -1

Query: 353 IQGLQRSKHLARGEVDLRMGTAAKVVVLSLGDFSFSLPSELVLKVNNCYYVLSLSKNIIF 174
           +QGL+RS+ LARGEVD+R+G  A+V  +++G    SLPS LVL++NN Y + +L KN+I 
Sbjct: 292 LQGLKRSRSLARGEVDIRVGNGARVAAVAVGTMPLSLPSRLVLELNNYYCIPALCKNVIS 351

Query: 173 VSKLAKEGFAFVIKDN 126
            S L  EG+ F   DN
Sbjct: 352 ASCLQAEGYGFRSVDN 367


>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1073

 Score =  209 bits (531), Expect(2) = 3e-68
 Identities = 116/288 (40%), Positives = 165/288 (57%), Gaps = 6/288 (2%)
 Frame = -3

Query: 1185 MANNAYTSNNLRSLLEKEILTGPNFLDWYRILRIVLRLERKDYVXXXXXXXXXLIGSTQA 1006
            +A  A ++ NLR +LEKE LT  N +DWYR LRIVLR E K++V            +  A
Sbjct: 93   LAVPAPSNFNLRYILEKEKLTRTNIMDWYRNLRIVLRQEHKEFVLTQPFPADLP-NNAPA 151

Query: 1005 ARHIEHSN------DASCLMLATMSSDLQKIFENMGAYDTIKQLRTMFQKQARVERFETV 844
            A+  EH        D SCLMLATMS +LQ+ +E + A+  I  LR MF+ QAR ERF T 
Sbjct: 152  AQRREHERRCKEYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTS 211

Query: 843  QAIFDTKLEEGKPVSPHVLKMISHFENIERLGFPFGQELANDILIHSLPKSYDQFKLNYK 664
            +++F  +L EG PVSPHV+KMI + E++++LGFP  +ELA D+++ SLP S++ F +N+ 
Sbjct: 212  KSLFACRLAEGNPVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFN 271

Query: 663  MQGVEKNLYELHSMLKVVEVNLERKPKEEVLMVQXXXXXXXXXXXXXXGCQNKDKKVENK 484
            M  + + L ELH MLK  E ++ +K    V+++                  ++     N 
Sbjct: 272  MNNLNRTLAELHGMLKTAEESI-KKNSNHVMVMHKRKPNNKKSGQKRKLNSDEITSTSNS 330

Query: 483  KVQTEPKKGPTQDTKCFHCNGNGHWLRNCAKYLEDLKSGKITSNSGTA 340
            K + + K GP +D +CF     GHW RNC KYLE LK  +    S T+
Sbjct: 331  KTKVQ-KTGPAKDAECFFYKETGHWKRNCKKYLEQLKQKQQDGKSSTS 377



 Score = 79.7 bits (195), Expect(2) = 3e-68
 Identities = 38/76 (50%), Positives = 54/76 (71%)
 Frame = -1

Query: 353 IQGLQRSKHLARGEVDLRMGTAAKVVVLSLGDFSFSLPSELVLKVNNCYYVLSLSKNIIF 174
           +QGL+RS+ LARG VD+R+G   +V V+++G  + SLPS LVL++NNCY + +L KN+I 
Sbjct: 408 LQGLKRSRSLARGRVDIRVGNGERVAVVAVGTMTLSLPSGLVLELNNCYCIPALCKNVIS 467

Query: 173 VSKLAKEGFAFVIKDN 126
            S L  EG+ F   DN
Sbjct: 468 ASCLQAEGYGFRSMDN 483


>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1063

 Score =  209 bits (531), Expect(2) = 3e-68
 Identities = 116/288 (40%), Positives = 165/288 (57%), Gaps = 6/288 (2%)
 Frame = -3

Query: 1185 MANNAYTSNNLRSLLEKEILTGPNFLDWYRILRIVLRLERKDYVXXXXXXXXXLIGSTQA 1006
            +A  A ++ NLR +LEKE LT  N +DWYR LRIVLR E K++V            +  A
Sbjct: 93   LAVPAPSNFNLRYILEKEKLTRTNIMDWYRNLRIVLRQEHKEFVLTQPFPADLP-NNAPA 151

Query: 1005 ARHIEHSN------DASCLMLATMSSDLQKIFENMGAYDTIKQLRTMFQKQARVERFETV 844
            A+  EH        D SCLMLATMS +LQ+ +E + A+  I  LR MF+ QAR ERF T 
Sbjct: 152  AQRREHERRCKEYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTS 211

Query: 843  QAIFDTKLEEGKPVSPHVLKMISHFENIERLGFPFGQELANDILIHSLPKSYDQFKLNYK 664
            +++F  +L EG PVSPHV+KMI + E++++LGFP  +ELA D+++ SLP S++ F +N+ 
Sbjct: 212  KSLFACRLAEGNPVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFN 271

Query: 663  MQGVEKNLYELHSMLKVVEVNLERKPKEEVLMVQXXXXXXXXXXXXXXGCQNKDKKVENK 484
            M  + + L ELH MLK  E ++ +K    V+++                  ++     N 
Sbjct: 272  MNNLNRTLAELHGMLKTAEESI-KKNSNHVMVMHKRKPNNKKSGQKRKLNSDEITSTSNS 330

Query: 483  KVQTEPKKGPTQDTKCFHCNGNGHWLRNCAKYLEDLKSGKITSNSGTA 340
            K + + K GP +D +CF     GHW RNC KYLE LK  +    S T+
Sbjct: 331  KTKVQ-KTGPAKDAECFFYKETGHWKRNCKKYLEQLKQKQQDGKSSTS 377



 Score = 79.7 bits (195), Expect(2) = 3e-68
 Identities = 38/76 (50%), Positives = 54/76 (71%)
 Frame = -1

Query: 353 IQGLQRSKHLARGEVDLRMGTAAKVVVLSLGDFSFSLPSELVLKVNNCYYVLSLSKNIIF 174
           +QGL+RS+ LARG VD+R+G   +V V+++G  + SLPS LVL++NNCY + +L KN+I 
Sbjct: 408 LQGLKRSRSLARGRVDIRVGNGERVAVVAVGTMTLSLPSGLVLELNNCYCIPALCKNVIS 467

Query: 173 VSKLAKEGFAFVIKDN 126
            S L  EG+ F   DN
Sbjct: 468 ASCLQAEGYGFRSMDN 483


>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1084

 Score =  181 bits (459), Expect(2) = 3e-60
 Identities = 105/284 (36%), Positives = 150/284 (52%)
 Frame = -3

Query: 1191 VDMANNAYTSNNLRSLLEKEILTGPNFLDWYRILRIVLRLERKDYVXXXXXXXXXLIGST 1012
            V MA  A ++ NLRS++EKE LTG NF+DW    R        DY+              
Sbjct: 13   VIMAAPAASNFNLRSIIEKEKLTGTNFMDWEHEKRC------NDYL-------------- 52

Query: 1011 QAARHIEHSNDASCLMLATMSSDLQKIFENMGAYDTIKQLRTMFQKQARVERFETVQAIF 832
                      D SCLMLATMS  LQ+ +E + A+  I  LR M + QAR ER  T +++F
Sbjct: 53   ----------DISCLMLATMSPKLQRQYEALDAHTIITGLRNMSEDQARAERSNTSKSLF 102

Query: 831  DTKLEEGKPVSPHVLKMISHFENIERLGFPFGQELANDILIHSLPKSYDQFKLNYKMQGV 652
              +L EG PVSPHV+KMI + E++++LGFP  +EL  D+++ SLP S++ F +N+ M  +
Sbjct: 103  ACRLAEGNPVSPHVIKMIGYTESLDKLGFPLNRELVTDLILQSLPPSFEPFIMNFNMNNL 162

Query: 651  EKNLYELHSMLKVVEVNLERKPKEEVLMVQXXXXXXXXXXXXXXGCQNKDKKVENKKVQT 472
             + L ELH MLK  E ++ +K    V+++                  ++     N K + 
Sbjct: 163  NRTLAELHGMLKTAEESI-KKNSNHVMVMHKRKPNNKKSGQKRKLNSDEITSTSNSKTKV 221

Query: 471  EPKKGPTQDTKCFHCNGNGHWLRNCAKYLEDLKSGKITSNSGTA 340
            + K GP +D +CF C   GHW RN  KYLE LK  +    S T+
Sbjct: 222  Q-KTGPAKDAECFFCKETGHWKRNYKKYLEQLKQKQQDGKSSTS 264



 Score = 80.5 bits (197), Expect(2) = 3e-60
 Identities = 38/76 (50%), Positives = 54/76 (71%)
 Frame = -1

Query: 353 IQGLQRSKHLARGEVDLRMGTAAKVVVLSLGDFSFSLPSELVLKVNNCYYVLSLSKNIIF 174
           +QGL+RS+ LARGEVD+R+G  A+V  +++G    SLPS +VL++NNCY + +L KN+I 
Sbjct: 295 LQGLKRSRSLARGEVDIRVGNGARVAAVAVGTMPLSLPSGIVLELNNCYCIRALCKNVIS 354

Query: 173 VSKLAKEGFAFVIKDN 126
            S L  EG+ F   DN
Sbjct: 355 ASCLQAEGYGFRSVDN 370


>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1142

 Score =  181 bits (458), Expect(2) = 4e-60
 Identities = 104/282 (36%), Positives = 149/282 (52%)
 Frame = -3

Query: 1185 MANNAYTSNNLRSLLEKEILTGPNFLDWYRILRIVLRLERKDYVXXXXXXXXXLIGSTQA 1006
            MA  A ++ NLRS++EKE LTG NF+DW    R        DY+                
Sbjct: 88   MAAPAASNFNLRSIIEKEKLTGTNFMDWEHEKRC------NDYL---------------- 125

Query: 1005 ARHIEHSNDASCLMLATMSSDLQKIFENMGAYDTIKQLRTMFQKQARVERFETVQAIFDT 826
                    D SCLMLATMS  LQ+ +E + A+  I  LR M + QAR ER  T +++F  
Sbjct: 126  --------DISCLMLATMSPKLQRQYEALDAHTIITGLRNMSEDQARAERSNTSKSLFAC 177

Query: 825  KLEEGKPVSPHVLKMISHFENIERLGFPFGQELANDILIHSLPKSYDQFKLNYKMQGVEK 646
            +L EG PVSPHV+KMI + E++++LGFP  +EL  D+++ SLP S++ F +N+ M  + +
Sbjct: 178  RLAEGNPVSPHVIKMIGYTESLDKLGFPLNRELVTDLILQSLPPSFEPFIMNFNMNNLNR 237

Query: 645  NLYELHSMLKVVEVNLERKPKEEVLMVQXXXXXXXXXXXXXXGCQNKDKKVENKKVQTEP 466
             L ELH MLK  E ++ +K    V+++                  ++     N K + + 
Sbjct: 238  TLAELHGMLKTAEESI-KKNSNHVMVMHKRKPNNKKSGQKRKLNSDEITSTSNSKTKVQ- 295

Query: 465  KKGPTQDTKCFHCNGNGHWLRNCAKYLEDLKSGKITSNSGTA 340
            K GP +D +CF C   GHW RN  KYLE LK  +    S T+
Sbjct: 296  KTGPAKDAECFFCKETGHWKRNYKKYLEQLKQKQQDGKSSTS 337



 Score = 80.5 bits (197), Expect(2) = 4e-60
 Identities = 38/76 (50%), Positives = 54/76 (71%)
 Frame = -1

Query: 353 IQGLQRSKHLARGEVDLRMGTAAKVVVLSLGDFSFSLPSELVLKVNNCYYVLSLSKNIIF 174
           +QGL+RS+ LARGEVD+R+G  A+V  +++G    SLPS +VL++NNCY + +L KN+I 
Sbjct: 368 LQGLKRSRSLARGEVDIRVGNGARVAAVAVGTMPLSLPSGIVLELNNCYCIRALCKNVIS 427

Query: 173 VSKLAKEGFAFVIKDN 126
            S L  EG+ F   DN
Sbjct: 428 ASCLQAEGYGFRSVDN 443


>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score =  232 bits (592), Expect = 5e-58
 Identities = 130/281 (46%), Positives = 171/281 (60%), Gaps = 8/281 (2%)
 Frame = -3

Query: 1155 LRSLLEKEILTGPNFLDWYRILRIVLRLERKDYVXXXXXXXXXLIGSTQAARHI-----E 991
            LRS+LEKE L G NF DW R LRIVLR ++K++V            +  A +       +
Sbjct: 15   LRSILEKEKLNGTNFADWSRNLRIVLRQDKKEHVLEEPIPDVPTENAAAAIKTAYKKACD 74

Query: 990  HSNDASCLMLATMSSDLQKIFENMGAYDTIKQLRTMFQKQARVERFETVQAIFDTKLEEG 811
             S D SCLMLA M+SDLQK FEN+ AYD I  L+ MF+ QAR ERFE  + +F  KL EG
Sbjct: 75   ESLDVSCLMLAAMNSDLQKQFENIEAYDMIVALKGMFETQARTERFEISKNLFGCKLAEG 134

Query: 810  KPVSPHVLKMISHFENIERLGFPFGQELANDILIHSLPKSYDQFKLNYKMQGVEKNLYEL 631
             PVSPHV+KM+ + +++E+LGFP  QELA D+++ SLP+SY QF LN+ M G++KNL EL
Sbjct: 135  GPVSPHVIKMVGYTQSLEKLGFPLSQELATDLILASLPESYGQFILNFHMNGLDKNLTEL 194

Query: 630  HSMLKVVEVNLERKPKEEVLMVQXXXXXXXXXXXXXXGCQNKDK---KVENKKVQTEPKK 460
            H MLK  E ++ +K    V+MVQ                + K K   K++  K +T+ K 
Sbjct: 195  HMMLKTAEGSV-KKCNNHVIMVQKSTSFKKKAKTWIKK-KGKAKVSDKIQTDKPKTKTKS 252

Query: 459  GPTQDTKCFHCNGNGHWLRNCAKYLEDLKSGKITSNSGTAK 337
            GPTQ+ +CF+C   GHW RNC KYL D K    T  S T +
Sbjct: 253  GPTQENECFYCKELGHWKRNCKKYLADQKRNGGTKTSTTGE 293


>emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]
          Length = 948

 Score =  216 bits (551), Expect = 3e-53
 Identities = 118/288 (40%), Positives = 168/288 (58%), Gaps = 6/288 (2%)
 Frame = -3

Query: 1185 MANNAYTSNNLRSLLEKEILTGPNFLDWYRILRIVLRLERKDY--VXXXXXXXXXLIGST 1012
            MA +A ++ NLRS+LEKE LTG NF+DWYR LRIVLR E K++  +            + 
Sbjct: 78   MAAHAPSNFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFLLIQPFPADLPNNAPAA 137

Query: 1011 QAARHIEHSND---ASCLMLATMSSDLQKIFENMGAYDTIKQLRTMFQKQARVERFETVQ 841
            Q  +H    ND    SCLMLATMS +LQ  +E + A+  I  LR MF+ QAR ERF T +
Sbjct: 138  QRRKHERRCNDYLDISCLMLATMSPELQSQYEALDAHTIITGLRNMFEDQARAERFNTSK 197

Query: 840  AIFDTKLEEGKPVSPHVLKMISHFENIERLGFPFGQELANDILIHSLPKSYDQFKLNYKM 661
             +F  +L +G PVSPHV+KMI + E++++LGFP  +ELA D+++ SLP S++ F +N+ M
Sbjct: 198  FLFAYRLAQGNPVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNM 257

Query: 660  QGVEKNLYELHSMLKVVEVNLERKPKEEVLMVQXXXXXXXXXXXXXXGCQNKDKKVENKK 481
              + + L ELH MLK  E ++++     ++M +                 N D+      
Sbjct: 258  NNLNRTLAELHGMLKTAEESIKKNSNYVMVMHKLKPNNKKSGQKRKL---NSDEITSTSN 314

Query: 480  VQTEPKK-GPTQDTKCFHCNGNGHWLRNCAKYLEDLKSGKITSNSGTA 340
             +T+ +K GP +D +CF C   GHW RNC KYLE LK  +    S T+
Sbjct: 315  CKTKVQKTGPAKDAECFFCKETGHWKRNCKKYLEQLKQKQQDGKSSTS 362


>gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 829

 Score =  216 bits (549), Expect = 5e-53
 Identities = 119/288 (41%), Positives = 167/288 (57%), Gaps = 6/288 (2%)
 Frame = -3

Query: 1185 MANNAYTSNNLRSLLEKEILTGPNFLDWYRILRIVLRLERKDYVXXXXXXXXXLIGSTQA 1006
            M   A +S NLRS+LEKE LTG NF+DWYR LRIVLR E K++V            +  A
Sbjct: 80   MVAPAPSSFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFVLTESFPANLP-NNALA 138

Query: 1005 ARHIEHSN------DASCLMLATMSSDLQKIFENMGAYDTIKQLRTMFQKQARVERFETV 844
            A+  EH        D SCLMLATMS +LQ+ +E + A+  I  LR MF+ QAR ERF T 
Sbjct: 139  AQRREHEKRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTS 198

Query: 843  QAIFDTKLEEGKPVSPHVLKMISHFENIERLGFPFGQELANDILIHSLPKSYDQFKLNYK 664
            +++F  +L EG PVSPHV+K+I + E++++LGFP  +ELA D+++ SLP S++ F +N+ 
Sbjct: 199  KSLFACRLAEGNPVSPHVIKIIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFN 258

Query: 663  MQGVEKNLYELHSMLKVVEVNLERKPKEEVLMVQXXXXXXXXXXXXXXGCQNKDKKVENK 484
            M  + + L ELH MLK  E ++ +K    V+++                  ++     N 
Sbjct: 259  MNNLNRTLAELHGMLKTAEESI-KKNSNHVMVMHKRKPNNKKSGQKRKLNSDEITSTSNS 317

Query: 483  KVQTEPKKGPTQDTKCFHCNGNGHWLRNCAKYLEDLKSGKITSNSGTA 340
            K + + K GP +D +CF     GHW RNC KYLE LK  +    S T+
Sbjct: 318  KTKVQ-KTGPAKDAECFFYKETGHWKRNCKKYLEQLKQKQQDGKSSTS 364


>gb|AAX96621.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77550176|gb|ABA92973.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 591

 Score =  210 bits (534), Expect = 3e-51
 Identities = 118/287 (41%), Positives = 163/287 (56%), Gaps = 5/287 (1%)
 Frame = -3

Query: 1185 MANNAYTSNNLRSLLEKEILTGPNFLDWYRILRIVLRLERKDYVXXXXXXXXXLIGS--T 1012
            M   A ++ NLRS+LEKE LTG NF+DWY  LRIVLR E K++V            +  T
Sbjct: 23   MTAPAPSNFNLRSILEKEKLTGTNFMDWYHNLRIVLRQEHKEFVLTQPFLADLPNNAPAT 82

Query: 1011 QAARHIEHSN---DASCLMLATMSSDLQKIFENMGAYDTIKQLRTMFQKQARVERFETVQ 841
            Q   H    N   D SCLMLATMS  LQ+ +E + A+  I  LR MF+ QAR ERF T +
Sbjct: 83   QRREHERRCNEYLDISCLMLATMSLKLQRQYEALDAHTIITGLRNMFEDQARAERFNTSK 142

Query: 840  AIFDTKLEEGKPVSPHVLKMISHFENIERLGFPFGQELANDILIHSLPKSYDQFKLNYKM 661
            ++F  +L EG PVSPHV+KMI + E++++LGFP  +ELA D+++ SLP S++ F +N+ M
Sbjct: 143  SLFACRLAEGNPVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNM 202

Query: 660  QGVEKNLYELHSMLKVVEVNLERKPKEEVLMVQXXXXXXXXXXXXXXGCQNKDKKVENKK 481
              + + L ELH  LK  E ++ +K    V+ +                  ++     N K
Sbjct: 203  NNLNRTLAELHVTLKTAEESI-KKNSNHVMGMHKRKPNNKKSGQKRKLNSDEITTTSNSK 261

Query: 480  VQTEPKKGPTQDTKCFHCNGNGHWLRNCAKYLEDLKSGKITSNSGTA 340
             + + K GP +D +CF C   GHW RNC KYLE LK  +    S T+
Sbjct: 262  TKVQ-KTGPAKDAECFICKEIGHWKRNCKKYLEQLKQKQQDGKSSTS 307


>emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]
          Length = 923

 Score =  144 bits (364), Expect(2) = 2e-50
 Identities = 99/288 (34%), Positives = 137/288 (47%), Gaps = 6/288 (2%)
 Frame = -3

Query: 1185 MANNAYTSNNLRSLLEKEILTGPNFLDWYRILRIVLRLERKDYVXXXXXXXXXLIGSTQA 1006
            MA    +S NLRS+LEKE LTG NF+DWY  LRIVLR E K++V            +  A
Sbjct: 1    MAAPVPSSFNLRSILEKEKLTGTNFMDWYGNLRIVLRQEHKEFVLTQPFPADLP-NNAPA 59

Query: 1005 ARHIEHSN------DASCLMLATMSSDLQKIFENMGAYDTIKQLRTMFQKQARVERFETV 844
            A+  EH        D SCLMLATMS +LQ+ +E + A+  I  LR MF+ QAR ERF T 
Sbjct: 60   AQRREHKKQCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTS 119

Query: 843  QAIFDTKLEEGKPVSPHVLKMISHFENIERLGFPFGQELANDILIHSLPKSYDQFKLNYK 664
            +++F  +L E  P                                 SLP S++ F +N+ 
Sbjct: 120  KSLFACRLAEVNP---------------------------------SLPPSFEPFIMNFN 146

Query: 663  MQGVEKNLYELHSMLKVVEVNLERKPKEEVLMVQXXXXXXXXXXXXXXGCQNKDKKVENK 484
            M+ + + L ELH MLK  E ++ +K    V+++                  ++     N 
Sbjct: 147  MKNLNRTLIELHGMLKTAEESI-KKNSNHVMVMHKRKPNNKKSGQKRKLNSDEITSTRNS 205

Query: 483  KVQTEPKKGPTQDTKCFHCNGNGHWLRNCAKYLEDLKSGKITSNSGTA 340
            K + + K GP ++T        GHW RNC KYLE LK  +    S T+
Sbjct: 206  KTKVQ-KTGPAKET--------GHWKRNCKKYLEQLKQKQQNGKSSTS 244



 Score = 84.3 bits (207), Expect(2) = 2e-50
 Identities = 41/76 (53%), Positives = 56/76 (73%)
 Frame = -1

Query: 353 IQGLQRSKHLARGEVDLRMGTAAKVVVLSLGDFSFSLPSELVLKVNNCYYVLSLSKNIIF 174
           +QGL+RS+ LARGEVD+R+G  A+V V+++G  S SLPS LVL++NNCY + +L KN+I 
Sbjct: 275 LQGLKRSRSLARGEVDIRVGNGARVAVVAVGTMSLSLPSGLVLELNNCYCIPALCKNVIS 334

Query: 173 VSKLAKEGFAFVIKDN 126
            S L  EG+ F   DN
Sbjct: 335 ASCLQAEGYGFRSVDN 350


>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1050

 Score =  189 bits (479), Expect(2) = 6e-50
 Identities = 111/280 (39%), Positives = 156/280 (55%), Gaps = 6/280 (2%)
 Frame = -3

Query: 1185 MANNAYTSNNLRSLLEKEILTGPNFLDWYRILRIVLRLERKDYVXXXXXXXXXLIGSTQA 1006
            MA  A ++ NLRS+LEKE LTG NF+DWYR LRIVLR E K++V            + +A
Sbjct: 64   MAAPAPSNFNLRSILEKEKLTGINFMDWYRNLRIVLRQEHKEFVLTQPFLADLP-NNARA 122

Query: 1005 ARHIEHSN------DASCLMLATMSSDLQKIFENMGAYDTIKQLRTMFQKQARVERFETV 844
            A+  EH        D SCLMLATMS +LQ+ +E + A+  I  L  MF+ QAR ER    
Sbjct: 123  AQRREHEMRCNEYFDISCLMLATMSPELQRQYEALDAHTIITGLCNMFEDQARAER---- 178

Query: 843  QAIFDTKLEEGKPVSPHVLKMISHFENIERLGFPFGQELANDILIHSLPKSYDQFKLNYK 664
                   L EG PVSPH++KMI + E++++LGFP  QELA D+++ SLP S++ F +N+ 
Sbjct: 179  -------LAEGNPVSPHMIKMIGYTESLDKLGFPLSQELATDLILQSLPPSFEPFIMNFN 231

Query: 663  MQGVEKNLYELHSMLKVVEVNLERKPKEEVLMVQXXXXXXXXXXXXXXGCQNKDKKVENK 484
            M  + K L ELH MLK  + ++ +K    V+++                  ++     N 
Sbjct: 232  MNNLNKTLAELHGMLKTAKESI-KKNSNHVMVMHKSKPNNKKSGQKRKLNSDEITSTSNS 290

Query: 483  KVQTEPKKGPTQDTKCFHCNGNGHWLRNCAKYLEDLKSGK 364
            K + + K GP +D +CF C   GHW RN A   + L+  K
Sbjct: 291  KTKVQ-KTGPAKDAECFFCKETGHWKRNFAHICKSLQGLK 329



 Score = 38.5 bits (88), Expect(2) = 6e-50
 Identities = 16/29 (55%), Positives = 24/29 (82%)
 Frame = -1

Query: 353 IQGLQRSKHLARGEVDLRMGTAAKVVVLS 267
           +QGL+RS+ LARGEVD+R+G  A+V  ++
Sbjct: 325 LQGLKRSRSLARGEVDIRVGNGARVAAVA 353


>ref|XP_004977683.1| PREDICTED: uncharacterized protein LOC101759138 [Setaria italica]
          Length = 272

 Score =  201 bits (512), Expect = 1e-48
 Identities = 113/265 (42%), Positives = 159/265 (60%), Gaps = 7/265 (2%)
 Frame = -3

Query: 1146 LLEKEILTGPNFLDWYRILRIVLRLERKDYVXXXXXXXXXLIGSTQAARHI--EHSNDA- 976
            +LEKE L G NF+DWY  LRIV R E+ +YV         L+ +  AAR    +H +DA 
Sbjct: 1    MLEKEKLNGTNFIDWYCNLRIVFRQEKTEYVLEQPYPDDPLVDANAAARRAYQKHCDDAL 60

Query: 975  SCLMLATMSSDLQKIFENMGAYDTIKQLRTMFQKQARVERFETVQAIFDTKLEEGKPVSP 796
            +CLMLATM  DLQK +E++ A+  I+ LR +F+ Q R ER+   +++F  KL EG  VSP
Sbjct: 61   NCLMLATMFLDLQKQYEHVDAHTMIEGLRGIFENQVRAERYNISKSLFACKLAEGSSVSP 120

Query: 795  HVLKMISHFENIERLGFPFGQELANDILIHSLPKSYDQFKLNYKMQGVEKNLYELHSMLK 616
            +V+K+I + E +++LGF     LA DI++  L  SY  F LNY+M G+EK L ELH MLK
Sbjct: 121  YVIKIIGYIETLDKLGFELKDHLAIDIILQLLTMSYKPFILNYQMNGMEKTLLELHGMLK 180

Query: 615  VVEVNLERKPKEEVLMVQXXXXXXXXXXXXXXGCQNKDKKVENKKVQTEPKK----GPTQ 448
            + + ++++ P   V+MVQ                + K K V N+   ++PK+     P+ 
Sbjct: 181  IAKESIKKNP-THVMMVQKENKKRKRWTPPKG--KGKGKVVPNEPPSSKPKRKGKSSPSP 237

Query: 447  DTKCFHCNGNGHWLRNCAKYLEDLK 373
            D +CFHC+  GHW RNC KYLED K
Sbjct: 238  DDECFHCHLKGHWSRNCKKYLEDKK 262


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1248

 Score =  199 bits (505), Expect = 6e-48
 Identities = 110/268 (41%), Positives = 156/268 (58%), Gaps = 6/268 (2%)
 Frame = -3

Query: 1185 MANNAYTSNNLRSLLEKEILTGPNFLDWYRILRIVLRLERKDYVXXXXXXXXXLIGSTQA 1006
            MA  A ++ NLRS+LEKE LTG NF+DWYR LRIVLR E K++V            +  A
Sbjct: 68   MAAPAPSNFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFVLTEPFPANLP-NNAPA 126

Query: 1005 ARHIEHSN------DASCLMLATMSSDLQKIFENMGAYDTIKQLRTMFQKQARVERFETV 844
            A+  EH        D SCLMLATMS +LQ+ +E + A+  I  LR MF+ QAR ERF T 
Sbjct: 127  AQRREHEKRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTS 186

Query: 843  QAIFDTKLEEGKPVSPHVLKMISHFENIERLGFPFGQELANDILIHSLPKSYDQFKLNYK 664
            +++F  +L EG  VSPHV+KMI + E++++LGFP  +ELA D+++ SLP S++ F +N+ 
Sbjct: 187  KSLFACRLAEGNLVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFN 246

Query: 663  MQGVEKNLYELHSMLKVVEVNLERKPKEEVLMVQXXXXXXXXXXXXXXGCQNKDKKVENK 484
            M  + + L ELH MLK  E ++ +K    V+++                  ++     N 
Sbjct: 247  MNNLNRTLAELHGMLKTAEESI-KKNSNHVMVMHKRKPNNKKSGQKRKLNSDEITSTSNS 305

Query: 483  KVQTEPKKGPTQDTKCFHCNGNGHWLRN 400
            K + + K G  +D +CF C   GHW RN
Sbjct: 306  KTKVQ-KTGSAKDAECFFCKETGHWKRN 332


>emb|CAD40471.2| OSJNBa0067G20.17 [Oryza sativa Japonica Group]
          Length = 276

 Score =  198 bits (503), Expect = 1e-47
 Identities = 111/271 (40%), Positives = 157/271 (57%), Gaps = 6/271 (2%)
 Frame = -3

Query: 1167 TSNNLRSLLEKEILTGPNFLDWYRILRIVLRLERKDYVXXXXXXXXXLIGSTQAARHIEH 988
            +S NLRS+LEKE L G NF+DWYR LRIVLR E K++V            +T AAR  EH
Sbjct: 9    SSFNLRSILEKEKLNGTNFVDWYRNLRIVLRQEHKEFVLEEPFPTDLPNNAT-AARRREH 67

Query: 987  SN------DASCLMLATMSSDLQKIFENMGAYDTIKQLRTMFQKQARVERFETVQAIFDT 826
                    D SCLML T+S + Q+ ++ + A+  I +L  MF+ QAR ERF T +++F  
Sbjct: 68   EKRCNEYLDISCLMLVTISPEFQRQYQTLDAHTIITRLCNMFEYQARAERFNTSKSLFAC 127

Query: 825  KLEEGKPVSPHVLKMISHFENIERLGFPFGQELANDILIHSLPKSYDQFKLNYKMQGVEK 646
            +L EG  VSP+V+KMI + E++E+LGFP  +ELA D+++ SLP S+  F +N+ M   ++
Sbjct: 128  RLAEGNAVSPNVIKMIGYTESLEKLGFPLSKELAIDLILQSLPPSFKPFIMNFNM---DR 184

Query: 645  NLYELHSMLKVVEVNLERKPKEEVLMVQXXXXXXXXXXXXXXGCQNKDKKVENKKVQTEP 466
             L ELH MLK  E ++ +K    V+++                  ++     N K + + 
Sbjct: 185  TLAELHGMLKTAEESI-KKNSNYVMVMHKCKPNNKKSGQKRKLNSDEITSTSNSKTKVQ- 242

Query: 465  KKGPTQDTKCFHCNGNGHWLRNCAKYLEDLK 373
            K GP +D +CF C   GHW RNC KYLE  K
Sbjct: 243  KTGPAKDAECFFCKETGHWKRNCKKYLEQFK 273


>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score =  188 bits (478), Expect = 9e-45
 Identities = 110/281 (39%), Positives = 160/281 (56%), Gaps = 11/281 (3%)
 Frame = -3

Query: 1185 MANNAYTSNNLRSLLEKEILTGPNFLDWYRILRIVLRLERKDYVXXXXXXXXXLIGSTQA 1006
            MA  A ++ NLRS+LEKE LTG NF+DWYR LRIVLR E K++V            +  A
Sbjct: 1    MAAPAPSNFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFVLTEPFPANLP-NNAPA 59

Query: 1005 ARHIEHSN------DASCLMLATMSSDLQKIFENMGAYDTIKQLRTMFQKQARVERFETV 844
            A+  EH        D SCLMLATMS +LQ+ +E + A+  I  LR MF+ QAR ERF T 
Sbjct: 60   AQRREHEKRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTS 119

Query: 843  QAIFDTKLEEGKPVSPHVLKMISHFENIERLGFPFGQELANDILIHSLPKSYDQFKLNYK 664
            +++F  +L EG  VSPHV+KMI + E++++LGFP  +ELA D+++ SLP S++ F +N+ 
Sbjct: 120  KSLFACRLAEGNLVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFN 179

Query: 663  MQGVEKNLYELHSMLKVVEVNLERKPKEEVLMVQXXXXXXXXXXXXXXGCQNKDKKVENK 484
            M  + + L ELH MLK  E ++ +K    V+++                  ++     N 
Sbjct: 180  MNNLNRTLAELHGMLKTAEESI-KKNSNHVMVMHKRKPNNKKSGQKRKLNSDEITSTSNS 238

Query: 483  KVQTEPKKGPTQDTKCFHC-NGNGHWLRN----CAKYLEDL 376
            K + + K G  +D +CF C    G+  R+    C+ Y  D+
Sbjct: 239  KTKVQ-KTGSAKDAECFFCKETEGYGFRSVDNGCSVYYNDI 278


>ref|XP_006397405.1| hypothetical protein EUTSA_v10022479mg, partial [Eutrema salsugineum]
            gi|557098463|gb|ESQ38858.1| hypothetical protein
            EUTSA_v10022479mg, partial [Eutrema salsugineum]
          Length = 211

 Score =  187 bits (476), Expect = 1e-44
 Identities = 101/211 (47%), Positives = 137/211 (64%), Gaps = 7/211 (3%)
 Frame = -3

Query: 1179 NNAYTSNNLRSLLEKEILTGPNFLDWYRILRIVLRLERKDYVXXXXXXXXXLIGSTQAA- 1003
            +N ++S +LRS+LEK+ L G NFL+WYR LRIVL+ E+K+YV            +   A 
Sbjct: 2    SNPHSSFSLRSVLEKDKLNGSNFLEWYRNLRIVLKQEKKEYVLEKSLPPEKPKSNAPHAE 61

Query: 1002 -----RHIEHSNDASCLMLATMSSDLQKIFENMGA-YDTIKQLRTMFQKQARVERFETVQ 841
                 +H     D  CLMLATM+SDLQK +EN+ +  D I  L+ MFQ+QAR ER++TV+
Sbjct: 62   RNTYEKHASDMVDVCCLMLATMNSDLQKQYENVESPIDMITSLKGMFQEQARTERYQTVK 121

Query: 840  AIFDTKLEEGKPVSPHVLKMISHFENIERLGFPFGQELANDILIHSLPKSYDQFKLNYKM 661
            A+ D KL +  PVSPHV+KMI + +N+ +L  P  QELA D+++HSLP SYDQF +NY M
Sbjct: 122  ALIDCKLPKDSPVSPHVIKMIGYIDNLAKLDCPISQELATDLILHSLPSSYDQFVMNYNM 181

Query: 660  QGVEKNLYELHSMLKVVEVNLERKPKEEVLM 568
              + K L ELH ML+  E N+ +K    VLM
Sbjct: 182  HNLTKTLTELHGMLRSAEPNI-KKGTPNVLM 211


>ref|XP_006395894.1| hypothetical protein EUTSA_v10005360mg, partial [Eutrema salsugineum]
            gi|557092533|gb|ESQ33180.1| hypothetical protein
            EUTSA_v10005360mg, partial [Eutrema salsugineum]
          Length = 214

 Score =  187 bits (474), Expect = 3e-44
 Identities = 101/213 (47%), Positives = 137/213 (64%), Gaps = 7/213 (3%)
 Frame = -3

Query: 1179 NNAYTSNNLRSLLEKEILTGPNFLDWYRILRIVLRLERKDYVXXXXXXXXXLIGSTQAA- 1003
            +N Y+S +LRS+LEK+ L G NFLDWYR LRIVL+ E+K+YV            +   A 
Sbjct: 2    SNPYSSFSLRSVLEKDKLNGSNFLDWYRNLRIVLKQEKKEYVLEKSLPPEKPKSNAPHAE 61

Query: 1002 -----RHIEHSNDASCLMLATMSSDLQKIFENMGA-YDTIKQLRTMFQKQARVERFETVQ 841
                 +H     D  CLMLATM+SDLQK +EN+ +  D I  L+ MFQ+QA+ ER++TV+
Sbjct: 62   RNTYEKHASDMVDVCCLMLATMNSDLQKQYENVESPIDMITSLKGMFQEQAQTERYQTVK 121

Query: 840  AIFDTKLEEGKPVSPHVLKMISHFENIERLGFPFGQELANDILIHSLPKSYDQFKLNYKM 661
            A+ D KL +  PVSPHV+KMI + +N+ +L  P  QELA D+++ SLP SY+QF +NY M
Sbjct: 122  ALIDCKLPKDSPVSPHVIKMIGYIDNLAKLDCPISQELATDLILQSLPSSYNQFVMNYNM 181

Query: 660  QGVEKNLYELHSMLKVVEVNLERKPKEEVLMVQ 562
              + K L ELH ML+  E N+ +K     LMVQ
Sbjct: 182  HNLTKTLIELHGMLRSAEPNI-KKGTPNALMVQ 213


>gb|AAK52165.1|AC084831_19 putative polyprotein [Oryza sativa Japonica Group]
            gi|108709282|gb|ABF97077.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 262

 Score =  186 bits (471), Expect = 6e-44
 Identities = 106/264 (40%), Positives = 151/264 (57%), Gaps = 5/264 (1%)
 Frame = -3

Query: 1185 MANNAYTSNNLRSLLEKEILTGPNFLDWYRILRIVLRLERKDYVXXXXXXXXXLIGSTQA 1006
            MA  A +S NLRS+LEKE LTG NF+DWY  L IVLR E K++V            +  A
Sbjct: 1    MAAPALSSFNLRSILEKEELTGTNFMDWYCNLGIVLRQEHKEFVLTQPFPADLPNNAPVA 60

Query: 1005 AR--HIEHSND---ASCLMLATMSSDLQKIFENMGAYDTIKQLRTMFQKQARVERFETVQ 841
             R  H +  ND    SCLMLATMS + Q+ +E + A+  I  LR MF+ QAR ERF T++
Sbjct: 61   QRSEHEKRCNDYLDISCLMLATMSPEFQRQYEALDAHTIITGLRNMFEDQARAERFNTLK 120

Query: 840  AIFDTKLEEGKPVSPHVLKMISHFENIERLGFPFGQELANDILIHSLPKSYDQFKLNYKM 661
            ++F  +L EG PVS HV+KMI + E++++LG P  +ELA D+++ SLP S++ F +N+ M
Sbjct: 121  SLFACRLAEGNPVSLHVIKMIGYTESLDKLGCPLSRELATDLILQSLPPSFEPFIMNFNM 180

Query: 660  QGVEKNLYELHSMLKVVEVNLERKPKEEVLMVQXXXXXXXXXXXXXXGCQNKDKKVENKK 481
              +  +L ELH MLK  E ++ +K    V+++                  ++     N K
Sbjct: 181  NNLNSSLAELHGMLKTAEESI-KKNSNHVMVMHKCKPNNKKSGQKRKLNSDEIMSTSNSK 239

Query: 480  VQTEPKKGPTQDTKCFHCNGNGHW 409
             + E K GP +DT+CF      HW
Sbjct: 240  TKVE-KTGPAKDTECFFYKETDHW 262