BLASTX nr result

ID: Achyranthes23_contig00002696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00002696
         (706 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOX96667.1| Photosystem II 5 kDa protein, chloroplastic [Theo...    62   1e-07
gb|AFK48333.1| unknown [Medicago truncatula]                           57   6e-06
gb|ESW03384.1| hypothetical protein PHAVU_011G009700g [Phaseolus...    57   8e-06
ref|XP_004291777.1| PREDICTED: photosystem II 5 kDa protein, chl...    57   8e-06
ref|XP_002517817.1| Photosystem II 5 kDa protein, chloroplast pr...    57   8e-06

>gb|EOX96667.1| Photosystem II 5 kDa protein, chloroplastic [Theobroma cacao]
          Length = 106

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
 Frame = -2

Query: 450 HRRLVITNSVKP---NTVKVSRETTQETTSNGRREXXXXXXXXXXXXXXXXXXAEEPKRG 280
           HRRLV+ N+ K      VK+S ET +E  +NGRRE                  A+EPK G
Sbjct: 25  HRRLVVANAAKGAEVERVKLSGETKREC-NNGRRELMFAAAAAAVCSVAGVAAADEPKPG 83

Query: 279 TPAAKKAYNPVCVANPTAKICN 214
           TP A+K Y P+CV  PTA+IC+
Sbjct: 84  TPEARKVYAPICVTMPTARICH 105


>gb|AFK48333.1| unknown [Medicago truncatula]
          Length = 108

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
 Frame = -2

Query: 447 RRLVITNSVKP---NTVKVSRETTQETTSNGRREXXXXXXXXXXXXXXXXXXAEEPKRGT 277
           R+LV+ N+ K      +KV+ +  +E T+  R                    A+EPKRG+
Sbjct: 27  RKLVVANAAKAVEGGKMKVNYDNEKEETNGRRNIMFAAAAAAVCSVAGMALAADEPKRGS 86

Query: 276 PAAKKAYNPVCVANPTAKICNY 211
           P AKKAY PVCV  PTA+IC Y
Sbjct: 87  PEAKKAYAPVCVTMPTARICRY 108


>gb|ESW03384.1| hypothetical protein PHAVU_011G009700g [Phaseolus vulgaris]
          Length = 106

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 34/81 (41%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
 Frame = -2

Query: 447 RRLVITNS---VKPNTVKVSRETTQETTSNGRREXXXXXXXXXXXXXXXXXXAEEPKRGT 277
           RRLV+ N+   V+    K S E  +E  +NGRR                   A+EPKRGT
Sbjct: 26  RRLVVANASKAVEGEKTKFSSENDKEG-NNGRRNMMFAAAAAAVCSVAGMSMADEPKRGT 84

Query: 276 PAAKKAYNPVCVANPTAKICN 214
           P AKK Y P+CV  PTA+IC+
Sbjct: 85  PEAKKIYYPICVTMPTARICH 105


>ref|XP_004291777.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 104

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 40/102 (39%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
 Frame = -2

Query: 510 MASFTMXXXXXXXXXXXXXSHRR--LVITNSVKPNTVKVSRETTQ--ETTSNGRREXXXX 343
           MAS TM             + RR  +V   S  P   KV+ E  Q  E +S+GRR+    
Sbjct: 1   MASMTMTASFLASTITKPSTPRRSLIVAKASRAPEAEKVTVELKQSKEESSSGRRDLIFA 60

Query: 342 XXXXXXXXXXXXXXAEEPKRGTPAAKKAYNPVCVANPTAKIC 217
                         A+EP+RGTPAAKK Y PVCV  PTA+IC
Sbjct: 61  AAAAAACSIAKVAMADEPERGTPAAKKKYAPVCVTMPTARIC 102


>ref|XP_002517817.1| Photosystem II 5 kDa protein, chloroplast precursor, putative
           [Ricinus communis] gi|223543089|gb|EEF44624.1|
           Photosystem II 5 kDa protein, chloroplast precursor,
           putative [Ricinus communis]
          Length = 104

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 30/78 (38%), Positives = 40/78 (51%)
 Frame = -2

Query: 447 RRLVITNSVKPNTVKVSRETTQETTSNGRREXXXXXXXXXXXXXXXXXXAEEPKRGTPAA 268
           R LV+ N+            +++ +SNGRR+                  AEEPK GTP A
Sbjct: 26  RTLVVANAAAGGQKVKMNHDSEKESSNGRRDLMFAAVAAAACSVAGVAAAEEPKAGTPEA 85

Query: 267 KKAYNPVCVANPTAKICN 214
           KK Y+PVCV  PTA+IC+
Sbjct: 86  KKFYSPVCVTMPTARICH 103


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