BLASTX nr result

ID: Achyranthes23_contig00002591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00002591
         (600 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006361403.1| PREDICTED: transcription initiation factor T...    66   8e-09
ref|XP_002273931.1| PREDICTED: transcription initiation factor T...    65   1e-08
ref|XP_004236777.1| PREDICTED: transcription initiation factor T...    65   2e-08
ref|XP_002521322.1| protein with unknown function [Ricinus commu...    62   1e-07
ref|XP_002299587.2| TATA BINDING protein ASSOCIATED FACTOR 21KDA...    59   1e-06
ref|XP_002331174.1| predicted protein [Populus trichocarpa]            59   1e-06
gb|ABK94051.1| unknown [Populus trichocarpa]                           59   1e-06
ref|XP_006465914.1| PREDICTED: transcription initiation factor T...    57   4e-06
ref|NP_001275226.1| uncharacterized protein LOC102577826 [Solanu...    57   4e-06
gb|EMJ16262.1| hypothetical protein PRUPE_ppa012286mg [Prunus pe...    56   8e-06

>ref|XP_006361403.1| PREDICTED: transcription initiation factor TFIID subunit 9 isoform
           X1 [Solanum tuberosum] gi|565391387|ref|XP_006361404.1|
           PREDICTED: transcription initiation factor TFIID subunit
           9 isoform X2 [Solanum tuberosum]
           gi|565391389|ref|XP_006361405.1| PREDICTED:
           transcription initiation factor TFIID subunit 9 isoform
           X3 [Solanum tuberosum] gi|565391391|ref|XP_006361406.1|
           PREDICTED: transcription initiation factor TFIID subunit
           9 isoform X4 [Solanum tuberosum]
          Length = 183

 Score = 65.9 bits (159), Expect = 8e-09
 Identities = 37/72 (51%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
 Frame = -3

Query: 598 LPPEEDTLINPNYQLVIPKKXXXXXXXXXXXXXXXXXXXXXXP-------KTDVPQSTPQ 440
           LPPE+DTLINPNYQL I KK                              KTDVPQ TPQ
Sbjct: 112 LPPEQDTLINPNYQLAIAKKQTSQPEETEEDEESADPNPAPSKNPSLSHEKTDVPQGTPQ 171

Query: 439 RVSFPLGAKRPK 404
           RVSFPLGAKRP+
Sbjct: 172 RVSFPLGAKRPR 183


>ref|XP_002273931.1| PREDICTED: transcription initiation factor TFIID subunit 9B [Vitis
           vinifera] gi|297742999|emb|CBI35866.3| unnamed protein
           product [Vitis vinifera]
          Length = 177

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 34/67 (50%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
 Frame = -3

Query: 598 LPPEEDTLINPNYQLVIPKKXXXXXXXXXXXXXXXXXXXXXXP--KTDVPQSTPQRVSFP 425
           LPPE+DTLI+PNYQL IPKK                         +TD+PQ TPQRVSFP
Sbjct: 111 LPPEQDTLISPNYQLAIPKKRTAQAVEETEEDEEGADPSHASQEGRTDLPQHTPQRVSFP 170

Query: 424 LGAKRPK 404
           +GAKRP+
Sbjct: 171 IGAKRPR 177


>ref|XP_004236777.1| PREDICTED: transcription initiation factor TFIID subunit 9-like
           isoform 1 [Solanum lycopersicum]
           gi|460382101|ref|XP_004236778.1| PREDICTED:
           transcription initiation factor TFIID subunit 9-like
           isoform 2 [Solanum lycopersicum]
          Length = 183

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 36/72 (50%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
 Frame = -3

Query: 598 LPPEEDTLINPNYQLVIPKKXXXXXXXXXXXXXXXXXXXXXXP-------KTDVPQSTPQ 440
           LPPE+DTLINPNYQL I KK                              KTD+PQ TPQ
Sbjct: 112 LPPEQDTLINPNYQLAIAKKQTNQPEETEEDEESADPNPAPSKNPTLSHEKTDLPQGTPQ 171

Query: 439 RVSFPLGAKRPK 404
           RVSFPLGAKRP+
Sbjct: 172 RVSFPLGAKRPR 183


>ref|XP_002521322.1| protein with unknown function [Ricinus communis]
           gi|223539400|gb|EEF40990.1| protein with unknown
           function [Ricinus communis]
          Length = 175

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 37/66 (56%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
 Frame = -3

Query: 598 LPPEEDTLINPNYQLVIPKK-XXXXXXXXXXXXXXXXXXXXXXPKTDVPQSTPQRVSFPL 422
           LPPE+DTLI+PNYQL IPKK                       PKTDVPQ TPQRVSFPL
Sbjct: 111 LPPEQDTLISPNYQLAIPKKQSVQATEETEEDEESADPNSSQEPKTDVPQGTPQRVSFPL 170

Query: 421 GAKRPK 404
             KRPK
Sbjct: 171 -TKRPK 175


>ref|XP_002299587.2| TATA BINDING protein ASSOCIATED FACTOR 21KDA SUBUNIT [Populus
           trichocarpa] gi|550347503|gb|EEE84392.2| TATA BINDING
           protein ASSOCIATED FACTOR 21KDA SUBUNIT [Populus
           trichocarpa]
          Length = 175

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 35/66 (53%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
 Frame = -3

Query: 598 LPPEEDTLINPNYQLVIPKK-XXXXXXXXXXXXXXXXXXXXXXPKTDVPQSTPQRVSFPL 422
           LPPE+DTLI+PNYQL IPKK                        KTD PQ TPQRVSFPL
Sbjct: 111 LPPEQDTLISPNYQLAIPKKRTAQAIEETEEDEDSADPNQSQEQKTDPPQLTPQRVSFPL 170

Query: 421 GAKRPK 404
             KRPK
Sbjct: 171 -TKRPK 175


>ref|XP_002331174.1| predicted protein [Populus trichocarpa]
          Length = 96

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 35/66 (53%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
 Frame = -3

Query: 598 LPPEEDTLINPNYQLVIPKK-XXXXXXXXXXXXXXXXXXXXXXPKTDVPQSTPQRVSFPL 422
           LPPE+DTLI+PNYQL IPKK                        KTD PQ TPQRVSFPL
Sbjct: 32  LPPEQDTLISPNYQLAIPKKRTAQAIEETEEDEESADPNQSQEQKTDPPQLTPQRVSFPL 91

Query: 421 GAKRPK 404
             KRPK
Sbjct: 92  -TKRPK 96


>gb|ABK94051.1| unknown [Populus trichocarpa]
          Length = 175

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 35/66 (53%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
 Frame = -3

Query: 598 LPPEEDTLINPNYQLVIPKK-XXXXXXXXXXXXXXXXXXXXXXPKTDVPQSTPQRVSFPL 422
           LPPE+DTLI+PNYQL IPKK                        KTD PQ TPQRVSFPL
Sbjct: 111 LPPEQDTLISPNYQLAIPKKRTAQAIEETEEDEESADPNQSQEQKTDPPQLTPQRVSFPL 170

Query: 421 GAKRPK 404
             KRPK
Sbjct: 171 -TKRPK 175


>ref|XP_006465914.1| PREDICTED: transcription initiation factor TFIID subunit 9-like
           isoform X1 [Citrus sinensis]
           gi|568823005|ref|XP_006465915.1| PREDICTED:
           transcription initiation factor TFIID subunit 9-like
           isoform X2 [Citrus sinensis]
           gi|568823007|ref|XP_006465916.1| PREDICTED:
           transcription initiation factor TFIID subunit 9-like
           isoform X3 [Citrus sinensis]
          Length = 175

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 34/66 (51%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
 Frame = -3

Query: 598 LPPEEDTLINPNYQLVIPKKXXXXXXXXXXXXXXXXXXXXXXPK-TDVPQSTPQRVSFPL 422
           LPPE+DTLI+PNYQL IPKK                       + TD+PQ TPQRVSFPL
Sbjct: 111 LPPEQDTLISPNYQLSIPKKQSAQEAEEMEEDEESTELSASQEQATDLPQQTPQRVSFPL 170

Query: 421 GAKRPK 404
            AKR K
Sbjct: 171 -AKRTK 175


>ref|NP_001275226.1| uncharacterized protein LOC102577826 [Solanum tuberosum]
           gi|77416927|gb|ABA81859.1| unknown [Solanum tuberosum]
          Length = 217

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 33/68 (48%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
 Frame = -3

Query: 598 LPPEEDTLINPNYQLVIPKKXXXXXXXXXXXXXXXXXXXXXXP-------KTDVPQSTPQ 440
           LPPE+DTLINPNYQL I KK                              KTDVPQ TPQ
Sbjct: 112 LPPEQDTLINPNYQLAIAKKQTSQPEETEEDEERADPNPAPSKNPSLSHEKTDVPQGTPQ 171

Query: 439 RVSFPLGA 416
           +VSFPLGA
Sbjct: 172 QVSFPLGA 179


>gb|EMJ16262.1| hypothetical protein PRUPE_ppa012286mg [Prunus persica]
          Length = 176

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 33/67 (49%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
 Frame = -3

Query: 598 LPPEEDTLINPNYQLVIPKKXXXXXXXXXXXXXXXXXXXXXXPK--TDVPQSTPQRVSFP 425
           LPPE+DTLI+PNYQL IPKK                       +  +D+PQ TPQRVSFP
Sbjct: 111 LPPEQDTLISPNYQLAIPKKQSAQAVEEMEEDEEPAEPNPPQEQKPSDLPQGTPQRVSFP 170

Query: 424 LGAKRPK 404
           L AKR K
Sbjct: 171 L-AKRTK 176


Top