BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00001490
         (2029 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30403.3| unnamed protein product [Vitis vinifera]              496   e-137
ref|XP_002274594.2| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...   472   e-130
ref|XP_006373980.1| hypothetical protein POPTR_0016s12200g [Popu...   470   e-129
ref|XP_006481011.1| PREDICTED: RNA polymerase II C-terminal doma...   467   e-128
ref|XP_006481006.1| PREDICTED: RNA polymerase II C-terminal doma...   467   e-128
ref|XP_006429349.1| hypothetical protein CICLE_v10011105mg [Citr...   467   e-128
gb|EOY07244.1| RNA polymerase II C-terminal domain phosphatase-l...   465   e-128
ref|XP_006481007.1| PREDICTED: RNA polymerase II C-terminal doma...   455   e-125
ref|XP_006429346.1| hypothetical protein CICLE_v10011105mg [Citr...   455   e-125
ref|XP_002528114.1| double-stranded RNA binding protein, putativ...   452   e-124
ref|XP_006429344.1| hypothetical protein CICLE_v10011105mg [Citr...   442   e-121
gb|EMJ06138.1| hypothetical protein PRUPE_ppa001155mg [Prunus pe...   441   e-121
ref|XP_006373979.1| hypothetical protein POPTR_0016s12200g [Popu...   437   e-120
gb|ESW12356.1| hypothetical protein PHAVU_008G105400g [Phaseolus...   431   e-118
gb|EOY07247.1| RNA polymerase II C-terminal domain phosphatase-l...   431   e-118
gb|EOY07245.1| RNA polymerase II C-terminal domain phosphatase-l...   431   e-118
ref|XP_006481010.1| PREDICTED: RNA polymerase II C-terminal doma...   428   e-117
gb|EOY07246.1| RNA polymerase II C-terminal domain phosphatase-l...   427   e-116
ref|XP_004302639.1| PREDICTED: RNA polymerase II C-terminal doma...   424   e-116
ref|XP_003623236.1| RNA polymerase II C-terminal domain phosphat...   419   e-114

>emb|CBI30403.3| unnamed protein product [Vitis vinifera]
          Length = 853

 Score =  496 bits (1278), Expect = e-137
 Identities = 300/563 (53%), Positives = 355/563 (63%), Gaps = 52/563 (9%)
 Frame = -3

Query: 2024 SKQLLNRVVCVKSGSRKSLLHVFQDGLCHPNMAMVIDDRLKVWEDKDQPRVHVVPAFTPY 1845
            SKQLL+RVVCVKSGSRKSLL+VFQ+G CHP MAMVIDDRLKVWEDKDQPRVHVVP FTPY
Sbjct: 305  SKQLLDRVVCVKSGSRKSLLNVFQNGSCHPKMAMVIDDRLKVWEDKDQPRVHVVPPFTPY 364

Query: 1844 YAPQAETANAVPVLCVARNVACNVRGGFFKEFDENLLKKIFELFYEDEMSNLPSPPDVSN 1665
            YAPQAET N VP+LCVARNVACNVR GFFKEFDEN+L++I ELFYEDE+ NLPS PDVSN
Sbjct: 365  YAPQAETTNPVPILCVARNVACNVRAGFFKEFDENILRQISELFYEDEVVNLPSAPDVSN 424

Query: 1664 YLISEENGLAPNGNTSVPMSEGISGIEVDQKLPQVFPLPSKDDRLAVDSDANSATNIPDL 1485
            YL+SE+ G  PNGN +VP++EG+ G EV+++L Q            VDS A+   N  + 
Sbjct: 425  YLMSEDAGFVPNGNANVPIAEGMHGAEVERRLNQPH---------IVDSAASPIANSYEF 475

Query: 1484 RSETPQQS----------------IPSVPEGLLGIPNRRDVRTLSAD------------- 1392
            RSET Q                  +PS    LLG P +RD  +  +D             
Sbjct: 476  RSETLQPPALTVQNVVGPTSSRLLMPSQKPSLLGAPIKRDFSSFESDADMKRRLLIMKHG 535

Query: 1391 -----------PHNLKLPVQISQVSC------LVEEDANKGFLSNRVFIPAQEPDVEKAD 1263
                       P   +LP QIS  S       LVE+D+N+G L+NR     QE DV K D
Sbjct: 536  QDVRNQSLGDPPILSRLP-QISTSSLHPQGVWLVEDDSNRGHLNNRASGLVQEADVLKPD 594

Query: 1262 KQRSHSGLLGHSS--ATPVSSAQY-SRGSVDEANPAQEHPKQNLP-ASETTGVXXXXXXX 1095
            KQR H    GH++  +TPVS   +  +   DE + A E  K+NLP AS+ + V       
Sbjct: 595  KQRGHQIPFGHNTPGSTPVSLLPHLPQLKNDEVSAANERQKKNLPPASQPSEVGVSQNQA 654

Query: 1094 XXXXXXXKDTIVDAVKVNALPPSLSISVLQEIGRRCCSKVEFKLILSTSKDLQFSVEVLF 915
                        +A KVN +PP LSI VLQEIGRRC SKVEF+ ++STSKDLQFSVEVLF
Sbjct: 655  STTGREQ----TEAGKVNMMPPHLSIGVLQEIGRRCSSKVEFRSVVSTSKDLQFSVEVLF 710

Query: 914  TGEKIGVGMGKTRKDAQQQAAENALHFLAEKYLAYGM-RSGLVDRD-DKLPAQNENGFVW 741
            TGEKIGVGMGKTRKDAQQQAAENALH LA+KY+AY    SG VD+D DKL   NENGF+W
Sbjct: 711  TGEKIGVGMGKTRKDAQQQAAENALHSLADKYVAYTTPHSGAVDKDFDKLSLSNENGFLW 770

Query: 740  DDINLQSDELSSHEKLHRENAFEAAEMAPVSTSSMGIIQQAPKLANSPRLQQSLSGKRSK 561
            D  +  S EL   +   +E+  EA EMA  +TSS  + QQ  K ANSPRL QS+  KRSK
Sbjct: 771  DTTSAGSSELLMEDGFPKESISEAGEMAHGTTSSSVVNQQVQKRANSPRLPQSIPSKRSK 830

Query: 560  EETPXXXXXXXXXXXQRNGQPVS 492
            EE             Q+NG  +S
Sbjct: 831  EELMRGSQSLSSSWPQKNGHTIS 853


>ref|XP_002274594.2| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
            phosphatase-like 2-like [Vitis vinifera]
          Length = 789

 Score =  472 bits (1215), Expect = e-130
 Identities = 284/530 (53%), Positives = 337/530 (63%), Gaps = 33/530 (6%)
 Frame = -3

Query: 1982 SRKSLLHVFQDGLCHPNMAMVIDDRLKVWEDKDQPRVHVVPAFTPYYAPQAETANAVPVL 1803
            SRKSLL+VFQ+G CHP MAMVIDDRLKVWEDKDQPRVHVVP FTPYYAPQAET N VP+L
Sbjct: 282  SRKSLLNVFQNGSCHPKMAMVIDDRLKVWEDKDQPRVHVVPPFTPYYAPQAETTNPVPIL 341

Query: 1802 CVARNVACNVRGGFFKEFDENLLKKIFELFYEDEMSNLPSPPDVSNYLISEENGLAPNGN 1623
            CVARNVACNVR GFFKEFDEN+L++I ELFYEDE+ NLPS PDVSNYL+SE+ G  PNGN
Sbjct: 342  CVARNVACNVRAGFFKEFDENILRQISELFYEDEVVNLPSAPDVSNYLMSEDAGFVPNGN 401

Query: 1622 TSVPMSEGISGIEVDQKLPQVFPLPSKDDRLAVDSDANSATNIPDLRSETPQQS------ 1461
             +VP++EG+ G EV+++L Q       D++  VDS A+   N  + RSET Q        
Sbjct: 402  ANVPIAEGMHGAEVERRLNQ------PDEKHIVDSAASPIANSYEFRSETLQPPALTVQN 455

Query: 1460 ----------IPSVPEGLLGIPNRRDVRTLS-ADPHNLKLPVQISQVSC------LVEED 1332
                      +PS    LLG P +RD+R  S  DP  L    QIS  S       LVE+D
Sbjct: 456  VVGPTSSRLLMPSQKPSLLGAPIKRDLRNQSLGDPPILSRLPQISTSSLHPQGVWLVEDD 515

Query: 1331 ANKGFLSNRVFIPAQEPDVEKADKQRSHSGLLGHSS--ATPVSSAQY-SRGSVDEANPAQ 1161
            +N+G L+NR     QE DV K DKQR H    GH++  +TPVS   +  +   DE     
Sbjct: 516  SNRGHLNNRASGLVQEADVLKPDKQRGHQIPFGHNTPGSTPVSLLPHLPQLKNDEVCSVX 575

Query: 1160 EHPKQ-----NLPASETTGVXXXXXXXXXXXXXXKDTIVDAVKVNALPPSLSISVLQEIG 996
            E   +     +   + TTG                    +A KVN +PP LSI VLQEIG
Sbjct: 576  EFILEIKVGVSQNQASTTGREQ----------------TEAGKVNMMPPHLSIGVLQEIG 619

Query: 995  RRCCSKVEFKLILSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHFLAEKYL 816
            RRC SKVEF+ ++STSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALH LA+KY+
Sbjct: 620  RRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHSLADKYV 679

Query: 815  AYGM-RSGLVDRD-DKLPAQNENGFVWDDINLQSDELSSHEKLHRENAFEAAEMAPVSTS 642
            AY    SG VD+D DKL   NENGF+WD  +  S EL   +   +E+  EA EMA  +TS
Sbjct: 680  AYTTPHSGAVDKDFDKLSLSNENGFLWDTTSAGSSELLMEDGFPKESISEAGEMAHGTTS 739

Query: 641  SMGIIQQAPKLANSPRLQQSLSGKRSKEETPXXXXXXXXXXXQRNGQPVS 492
            S  + QQ  K ANSPRL QS+  KRSKEE             Q+NG  +S
Sbjct: 740  SSVVNQQVQKRANSPRLPQSIPSKRSKEELMRGSQSLSSSWPQKNGHTIS 789


>ref|XP_006373980.1| hypothetical protein POPTR_0016s12200g [Populus trichocarpa]
            gi|550321331|gb|ERP51777.1| hypothetical protein
            POPTR_0016s12200g [Populus trichocarpa]
          Length = 830

 Score =  470 bits (1209), Expect = e-129
 Identities = 281/521 (53%), Positives = 336/521 (64%), Gaps = 31/521 (5%)
 Frame = -3

Query: 2024 SKQLLNRVVCVKSGSRKSLLHVFQDGLCHPNMAMVIDDRLKVWEDKDQPRVHVVPAFTPY 1845
            SKQL +RVVCVKSGS+KSLL+VFQDG+CHP MAMVIDDRLKVWED DQPRVHVVPAFTPY
Sbjct: 305  SKQLSDRVVCVKSGSKKSLLNVFQDGMCHPKMAMVIDDRLKVWEDMDQPRVHVVPAFTPY 364

Query: 1844 YAPQAETANAVPVLCVARNVACNVRGGFFKEFDENLLKKIFELFYEDEMSNLPSPPDVSN 1665
            YAP AETANAVPVLCVARNVACNVRG FFKEFDE L+++I E+FYEDE+ +LP  PDVSN
Sbjct: 365  YAPLAETANAVPVLCVARNVACNVRGCFFKEFDEILIRRISEVFYEDEVKSLPPTPDVSN 424

Query: 1664 YLISEENGLAPNGNTSVPMSEGISGIEVDQKLPQVFPLPSKDDRLAVDSDANSATNIPDL 1485
            Y+++E++G  PNGN   P SEG+SGIE +++L Q       D +  ++S  +S TN  +L
Sbjct: 425  YMMTEDSGFVPNGNNIAPFSEGMSGIEAERRLHQ------SDGKTVMESAPHSITNSAEL 478

Query: 1484 RSETPQQSI----------------PSVPEGLLGIPNRRDVRT--------LSADPHNLK 1377
            R+E  Q ++                PS    LLG P RRD+R         LS  P  + 
Sbjct: 479  RTEISQPNVAIIPNVAGPTLSATLLPSQKPSLLGAPVRRDLRNQNSAQPPLLSRIPAAIP 538

Query: 1376 LPVQISQVSCLVEEDANKGFLSNRVFIPAQEPDVEKADKQRSHSGLLGH--SSATPVSSA 1203
            L     Q   LVEED ++   +NR    AQE D  K+DK R     L H  S++ P  S+
Sbjct: 539  LSSLQPQGGWLVEEDTSRAQSNNRPSATAQELDSLKSDKLRGLQNPLAHGASASAPAPSS 598

Query: 1202 QYSRGS---VDEANPAQEHPKQNLPASETTGVXXXXXXXXXXXXXXKDTIVDAVKVNALP 1032
              S  S   V+EA    +  KQ +PA E                  ++   +A K+N LP
Sbjct: 599  LVSHSSELKVEEAIAGNDMHKQIVPAGEA------GMSQNHVSSSSREFQAEAGKLNLLP 652

Query: 1031 PSLSISVLQEIGRRCCSKVEFKLILSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAA 852
              LSI VLQEIGRRC SKVEFK ++STSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAA
Sbjct: 653  SHLSIGVLQEIGRRCRSKVEFKSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAA 712

Query: 851  ENALHFLAEKYLAY-GMRSGLVDRD-DKLPAQNENGFVWDDINLQSDELSSHEKLHRENA 678
            ENAL  LAEKY AY    SG VD D DKL   NENGFVWD  + +S +L   +   +E  
Sbjct: 713  ENALRSLAEKYAAYVSPNSGAVDGDFDKLSIGNENGFVWDISSPESSDLVREDGSAKERP 772

Query: 677  FEAAEMAPVSTSSMGIIQQAPKLANSPRLQQSLSGKRSKEE 555
             E A+   V+TS+M + QQ  K ANSPR  QS+  KRSKEE
Sbjct: 773  SEVADAELVNTSNM-VNQQQQKRANSPRSPQSIPSKRSKEE 812


>ref|XP_006481011.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            2-like isoform X6 [Citrus sinensis]
          Length = 506

 Score =  467 bits (1201), Expect = e-128
 Identities = 278/517 (53%), Positives = 331/517 (64%), Gaps = 25/517 (4%)
 Frame = -3

Query: 2024 SKQLLNRVVCVKSGSRKSLLHVFQDGLCHPNMAMVIDDRLKVWEDKDQPRVHVVPAFTPY 1845
            SKQLL+RVVCVKSGSRKSLL+VFQ GLCHP MAMVIDDR KVWEDKDQPRVHVVPAFTPY
Sbjct: 23   SKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPY 82

Query: 1844 YAPQAETANAVPVLCVARNVACNVRGGFFKEFDENLLKKIFELFYEDEMSNLPSPPDVSN 1665
            YAPQAETANAVPVLCVARNVACNVRG FFKEFDENLL+ I E+FYEDE  NLP+ PDVSN
Sbjct: 83   YAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAPDVSN 142

Query: 1664 YLISEENGLAPNGNTSVPMSEGISGIEVDQKLPQVFPLPSKDDRLAVDSDANSATNIPDL 1485
            YL+SE+   APNG+T+ PMSEG++G+EV+++L Q       D++  VDS   S  N  DL
Sbjct: 143  YLMSEDANFAPNGSTNAPMSEGLNGLEVERRLNQ------SDEKYVVDSGLPSMKNSSDL 196

Query: 1484 RSET-------------PQQSIPSVPEGLLGIPNRRDVRTL----------SADPHNLKL 1374
            +SET             P   +PS   GLLG P RRD  ++          SA P    L
Sbjct: 197  KSETSLLPVAVASNATVPATVVPSQKPGLLGAPIRRDNSSMKHGFDLRNQNSAQP---PL 253

Query: 1373 PVQISQVSCLVEEDANKGFLSNRVFIPAQEPDVEKADKQRSHSGLLGHSSATPVSSAQYS 1194
            P    Q   +VEE+ N+   +NR    A              +GL  H+          S
Sbjct: 254  PKLHGQGGWIVEEEVNRVLPNNRPVSIA--------------TGLPSHA----------S 289

Query: 1193 RGSVDEANPAQEHPKQNLPASETTGVXXXXXXXXXXXXXXKDTIVDAVKVNALPPSLSIS 1014
            +   +EA  A +  KQNLP +                     T  +  K N LP  LSI 
Sbjct: 290  QAKGEEAIMAHDLHKQNLPPASQPPEIGVSQNHVSSNSREFQT--EGGKTNLLPSYLSIG 347

Query: 1013 VLQEIGRRCCSKVEFKLILSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHF 834
            VLQEIG+RC SKVEF+ ++STSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALH+
Sbjct: 348  VLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHY 407

Query: 833  LAEKYLAY-GMRSGLVDRD-DKLPAQNENGFVWDDINLQSDELSSHEKLHRENAFEAAEM 660
            LAEKY+AY   RSG +DRD DKL  +NENGF+WD I  +S+E    + L +E+  EA+E+
Sbjct: 408  LAEKYVAYITPRSGAMDRDFDKLSLENENGFLWDTIISESNEGLGEDGLRKESTPEASEV 467

Query: 659  APVSTSSMGIIQQAPKLANSPRLQQSLSGKRSKEETP 549
             P ST +    QQ  K  N P+L + +  KR K+E P
Sbjct: 468  EPGSTYASLGNQQVQKRPNVPKLSKLIPSKRLKDEPP 504


>ref|XP_006481006.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            2-like isoform X1 [Citrus sinensis]
          Length = 788

 Score =  467 bits (1201), Expect = e-128
 Identities = 278/517 (53%), Positives = 331/517 (64%), Gaps = 25/517 (4%)
 Frame = -3

Query: 2024 SKQLLNRVVCVKSGSRKSLLHVFQDGLCHPNMAMVIDDRLKVWEDKDQPRVHVVPAFTPY 1845
            SKQLL+RVVCVKSGSRKSLL+VFQ GLCHP MAMVIDDR KVWEDKDQPRVHVVPAFTPY
Sbjct: 305  SKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPY 364

Query: 1844 YAPQAETANAVPVLCVARNVACNVRGGFFKEFDENLLKKIFELFYEDEMSNLPSPPDVSN 1665
            YAPQAETANAVPVLCVARNVACNVRG FFKEFDENLL+ I E+FYEDE  NLP+ PDVSN
Sbjct: 365  YAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAPDVSN 424

Query: 1664 YLISEENGLAPNGNTSVPMSEGISGIEVDQKLPQVFPLPSKDDRLAVDSDANSATNIPDL 1485
            YL+SE+   APNG+T+ PMSEG++G+EV+++L Q       D++  VDS   S  N  DL
Sbjct: 425  YLMSEDANFAPNGSTNAPMSEGLNGLEVERRLNQ------SDEKYVVDSGLPSMKNSSDL 478

Query: 1484 RSET-------------PQQSIPSVPEGLLGIPNRRDVRTL----------SADPHNLKL 1374
            +SET             P   +PS   GLLG P RRD  ++          SA P    L
Sbjct: 479  KSETSLLPVAVASNATVPATVVPSQKPGLLGAPIRRDNSSMKHGFDLRNQNSAQP---PL 535

Query: 1373 PVQISQVSCLVEEDANKGFLSNRVFIPAQEPDVEKADKQRSHSGLLGHSSATPVSSAQYS 1194
            P    Q   +VEE+ N+   +NR    A              +GL  H+          S
Sbjct: 536  PKLHGQGGWIVEEEVNRVLPNNRPVSIA--------------TGLPSHA----------S 571

Query: 1193 RGSVDEANPAQEHPKQNLPASETTGVXXXXXXXXXXXXXXKDTIVDAVKVNALPPSLSIS 1014
            +   +EA  A +  KQNLP +                     T  +  K N LP  LSI 
Sbjct: 572  QAKGEEAIMAHDLHKQNLPPASQPPEIGVSQNHVSSNSREFQT--EGGKTNLLPSYLSIG 629

Query: 1013 VLQEIGRRCCSKVEFKLILSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHF 834
            VLQEIG+RC SKVEF+ ++STSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALH+
Sbjct: 630  VLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHY 689

Query: 833  LAEKYLAY-GMRSGLVDRD-DKLPAQNENGFVWDDINLQSDELSSHEKLHRENAFEAAEM 660
            LAEKY+AY   RSG +DRD DKL  +NENGF+WD I  +S+E    + L +E+  EA+E+
Sbjct: 690  LAEKYVAYITPRSGAMDRDFDKLSLENENGFLWDTIISESNEGLGEDGLRKESTPEASEV 749

Query: 659  APVSTSSMGIIQQAPKLANSPRLQQSLSGKRSKEETP 549
             P ST +    QQ  K  N P+L + +  KR K+E P
Sbjct: 750  EPGSTYASLGNQQVQKRPNVPKLSKLIPSKRLKDEPP 786


>ref|XP_006429349.1| hypothetical protein CICLE_v10011105mg [Citrus clementina]
            gi|557531406|gb|ESR42589.1| hypothetical protein
            CICLE_v10011105mg [Citrus clementina]
          Length = 788

 Score =  467 bits (1201), Expect = e-128
 Identities = 278/517 (53%), Positives = 331/517 (64%), Gaps = 25/517 (4%)
 Frame = -3

Query: 2024 SKQLLNRVVCVKSGSRKSLLHVFQDGLCHPNMAMVIDDRLKVWEDKDQPRVHVVPAFTPY 1845
            SKQLL+RVVCVKSGSRKSLL+VFQ GLCHP MAMVIDDR KVWEDKDQPRVHVVPAFTPY
Sbjct: 305  SKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPY 364

Query: 1844 YAPQAETANAVPVLCVARNVACNVRGGFFKEFDENLLKKIFELFYEDEMSNLPSPPDVSN 1665
            YAPQAETANAVPVLCVARNVACNVRG FFKEFDENLL+ I E+FYEDE  NLP+ PDVSN
Sbjct: 365  YAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAPDVSN 424

Query: 1664 YLISEENGLAPNGNTSVPMSEGISGIEVDQKLPQVFPLPSKDDRLAVDSDANSATNIPDL 1485
            YL+SE+   APNG+T+ PMSEG++G+EV+++L Q       D++  VDS   S  N  DL
Sbjct: 425  YLMSEDANFAPNGSTNAPMSEGLNGLEVERRLNQ------SDEKCVVDSGLPSMKNSSDL 478

Query: 1484 RSET-------------PQQSIPSVPEGLLGIPNRRDVRTL----------SADPHNLKL 1374
            +SET             P   +PS   GLLG P RRD  ++          SA P    L
Sbjct: 479  KSETSLLPVAVASNATVPATVVPSQKPGLLGAPIRRDNSSMKHGFDLRNQNSAQP---PL 535

Query: 1373 PVQISQVSCLVEEDANKGFLSNRVFIPAQEPDVEKADKQRSHSGLLGHSSATPVSSAQYS 1194
            P    Q   +VEE+ N+   +NR    A              +GL  H+          S
Sbjct: 536  PKLHGQGGWIVEEEVNRVLPNNRPVSIA--------------TGLPSHA----------S 571

Query: 1193 RGSVDEANPAQEHPKQNLPASETTGVXXXXXXXXXXXXXXKDTIVDAVKVNALPPSLSIS 1014
            +   +EA  A +  KQNLP +                     T  +  K N LP  LSI 
Sbjct: 572  QAKGEEAIMAHDLHKQNLPPASQPPEIGVSQNHVSSNSREFQT--EGGKTNLLPSYLSIG 629

Query: 1013 VLQEIGRRCCSKVEFKLILSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHF 834
            VLQEIG+RC SKVEF+ ++STSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALH+
Sbjct: 630  VLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHY 689

Query: 833  LAEKYLAY-GMRSGLVDRD-DKLPAQNENGFVWDDINLQSDELSSHEKLHRENAFEAAEM 660
            LAEKY+AY   RSG +DRD DKL  +NENGF+WD I  +S+E    + L +E+  EA+E+
Sbjct: 690  LAEKYVAYITPRSGAMDRDFDKLSLENENGFLWDTIISESNEGLGEDGLRKESTPEASEV 749

Query: 659  APVSTSSMGIIQQAPKLANSPRLQQSLSGKRSKEETP 549
             P ST +    QQ  K  N P+L + +  KR K+E P
Sbjct: 750  EPGSTYASLGNQQVQKRPNVPKLSKLIPSKRLKDEPP 786


>gb|EOY07244.1| RNA polymerase II C-terminal domain phosphatase-like 2 isoform 1
            [Theobroma cacao]
          Length = 862

 Score =  465 bits (1197), Expect = e-128
 Identities = 289/578 (50%), Positives = 349/578 (60%), Gaps = 67/578 (11%)
 Frame = -3

Query: 2024 SKQLLNRVVCVKSGSRKSLLHVFQDGLCHPNMAMVIDDRLKVWEDKDQPRVHVVPAFTPY 1845
            SKQLL+RVVCVKSGSRKSLL+VF+DG CHP MAMVIDDR KVWEDKDQPRVHVVP F PY
Sbjct: 305  SKQLLDRVVCVKSGSRKSLLNVFRDGKCHPQMAMVIDDRSKVWEDKDQPRVHVVPPFAPY 364

Query: 1844 YAPQAETANAVPVLCVARNVACNVRGGFFKEFDENLLKKIFELFYEDEMSNLPSPPDVSN 1665
            YAPQAETANAVPVLCVARNVACNVRG FFKEFDEN+++KI E+FYEDE+ NLP  PDVSN
Sbjct: 365  YAPQAETANAVPVLCVARNVACNVRGLFFKEFDENVIRKISEVFYEDEVVNLPLAPDVSN 424

Query: 1664 YLISEENGLAPNGNTSVPMSEGISGIEVDQKLPQVFPLPSKDDRLAVDSDANSATNIPDL 1485
            +L+ E+ G APNGN   P+SEG++G+EV+++L Q+      +++   DS  +   N P+L
Sbjct: 425  HLMLEDAGFAPNGNGGAPISEGMNGVEVERRLNQL------EEKHVSDSSTHLVMNNPEL 478

Query: 1484 RSETPQQSIPSVPE----------------------GLLGIPN------RRDVRTLSAD- 1392
            R ET Q  +  VP                       GLL  P       RR+  T+ +D 
Sbjct: 479  RYETSQPPVAIVPNVVGPASLTAPLPSQKPSLLGAPGLLSAPTLLGASVRRESNTIDSDY 538

Query: 1391 -----------------------PHNLKLPVQISQVSCL------VEEDANKGFLSNRVF 1299
                                   P   K+P QIS  S L      VEED NK  L++R  
Sbjct: 539  DMKRRALGSKQTLDLRNQSSVQPPLLSKVPAQISSSSILPQGGWLVEEDNNKAHLNDRSS 598

Query: 1298 IPAQEPDVEKADKQRSHSGLLGHSSATPVSSAQYSRGS---VDEANPAQEHPKQNLPA-- 1134
              AQE D  K+DK R+ +    HS+   VS+   S  S   V+EA+   +  KQN+P   
Sbjct: 599  GSAQEFDATKSDKLRNQNPF-SHSAPGSVSTGLPSHASQVKVEEAHAGLDTQKQNVPPAG 657

Query: 1133 --SETTGVXXXXXXXXXXXXXXKDTIVDAVKVNALPPSLSISVLQEIGRRCCSKVEFKLI 960
              SE  G                 +  +  K+N LP  LSISVLQEIGRRC SKVEF+ +
Sbjct: 658  HLSEIGGTQNHV------------SSTEGGKLNLLPSHLSISVLQEIGRRCGSKVEFRTV 705

Query: 959  LSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHFLAEKYLAY-GMRSGLVDR 783
            +STSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAE ALH LAEKYLAY   RSG VDR
Sbjct: 706  VSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAELALHNLAEKYLAYIAPRSGAVDR 765

Query: 782  D-DKLPAQNENGFVWDDINLQSDELSSHEKLHRENAFEAAEMAPVSTSSMGIIQQAPKLA 606
            D +KL    ENGF+W D+N  S E    + L +++  E A++ P S SS  + Q   K A
Sbjct: 766  DFNKLSLGTENGFLW-DVNPASSEALREDGLPKDSTSEVADVEPGSNSSSLVNQPVQKRA 824

Query: 605  NSPRLQQSLSGKRSKEETPXXXXXXXXXXXQRNGQPVS 492
            NSPR  +S+  KRSKEE              +N  P+S
Sbjct: 825  NSPRSSESMPSKRSKEEVLRRLRSLSSSRQPKNEHPIS 862


>ref|XP_006481007.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            2-like isoform X2 [Citrus sinensis]
            gi|568854805|ref|XP_006481008.1| PREDICTED: RNA
            polymerase II C-terminal domain phosphatase-like 2-like
            isoform X3 [Citrus sinensis]
            gi|568854807|ref|XP_006481009.1| PREDICTED: RNA
            polymerase II C-terminal domain phosphatase-like 2-like
            isoform X4 [Citrus sinensis]
          Length = 771

 Score =  455 bits (1171), Expect = e-125
 Identities = 272/502 (54%), Positives = 322/502 (64%), Gaps = 25/502 (4%)
 Frame = -3

Query: 2024 SKQLLNRVVCVKSGSRKSLLHVFQDGLCHPNMAMVIDDRLKVWEDKDQPRVHVVPAFTPY 1845
            SKQLL+RVVCVKSGSRKSLL+VFQ GLCHP MAMVIDDR KVWEDKDQPRVHVVPAFTPY
Sbjct: 305  SKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPY 364

Query: 1844 YAPQAETANAVPVLCVARNVACNVRGGFFKEFDENLLKKIFELFYEDEMSNLPSPPDVSN 1665
            YAPQAETANAVPVLCVARNVACNVRG FFKEFDENLL+ I E+FYEDE  NLP+ PDVSN
Sbjct: 365  YAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAPDVSN 424

Query: 1664 YLISEENGLAPNGNTSVPMSEGISGIEVDQKLPQVFPLPSKDDRLAVDSDANSATNIPDL 1485
            YL+SE+   APNG+T+ PMSEG++G+EV+++L Q       D++  VDS   S  N  DL
Sbjct: 425  YLMSEDANFAPNGSTNAPMSEGLNGLEVERRLNQ------SDEKYVVDSGLPSMKNSSDL 478

Query: 1484 RSET-------------PQQSIPSVPEGLLGIPNRRDVRTL----------SADPHNLKL 1374
            +SET             P   +PS   GLLG P RRD  ++          SA P    L
Sbjct: 479  KSETSLLPVAVASNATVPATVVPSQKPGLLGAPIRRDNSSMKHGFDLRNQNSAQP---PL 535

Query: 1373 PVQISQVSCLVEEDANKGFLSNRVFIPAQEPDVEKADKQRSHSGLLGHSSATPVSSAQYS 1194
            P    Q   +VEE+ N+   +NR    A              +GL  H+          S
Sbjct: 536  PKLHGQGGWIVEEEVNRVLPNNRPVSIA--------------TGLPSHA----------S 571

Query: 1193 RGSVDEANPAQEHPKQNLPASETTGVXXXXXXXXXXXXXXKDTIVDAVKVNALPPSLSIS 1014
            +   +EA  A +  KQNLP +                     T  +  K N LP  LSI 
Sbjct: 572  QAKGEEAIMAHDLHKQNLPPASQPPEIGVSQNHVSSNSREFQT--EGGKTNLLPSYLSIG 629

Query: 1013 VLQEIGRRCCSKVEFKLILSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHF 834
            VLQEIG+RC SKVEF+ ++STSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALH+
Sbjct: 630  VLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHY 689

Query: 833  LAEKYLAY-GMRSGLVDRD-DKLPAQNENGFVWDDINLQSDELSSHEKLHRENAFEAAEM 660
            LAEKY+AY   RSG +DRD DKL  +NENGF+WD I  +S+E    + L +E+  EA+E+
Sbjct: 690  LAEKYVAYITPRSGAMDRDFDKLSLENENGFLWDTIISESNEGLGEDGLRKESTPEASEV 749

Query: 659  APVSTSSMGIIQQAPKLANSPR 594
             P ST +    QQ  K  N P+
Sbjct: 750  EPGSTYASLGNQQVQKRPNVPK 771


>ref|XP_006429346.1| hypothetical protein CICLE_v10011105mg [Citrus clementina]
            gi|567873515|ref|XP_006429347.1| hypothetical protein
            CICLE_v10011105mg [Citrus clementina]
            gi|567873517|ref|XP_006429348.1| hypothetical protein
            CICLE_v10011105mg [Citrus clementina]
            gi|557531403|gb|ESR42586.1| hypothetical protein
            CICLE_v10011105mg [Citrus clementina]
            gi|557531404|gb|ESR42587.1| hypothetical protein
            CICLE_v10011105mg [Citrus clementina]
            gi|557531405|gb|ESR42588.1| hypothetical protein
            CICLE_v10011105mg [Citrus clementina]
          Length = 771

 Score =  455 bits (1171), Expect = e-125
 Identities = 272/502 (54%), Positives = 322/502 (64%), Gaps = 25/502 (4%)
 Frame = -3

Query: 2024 SKQLLNRVVCVKSGSRKSLLHVFQDGLCHPNMAMVIDDRLKVWEDKDQPRVHVVPAFTPY 1845
            SKQLL+RVVCVKSGSRKSLL+VFQ GLCHP MAMVIDDR KVWEDKDQPRVHVVPAFTPY
Sbjct: 305  SKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPY 364

Query: 1844 YAPQAETANAVPVLCVARNVACNVRGGFFKEFDENLLKKIFELFYEDEMSNLPSPPDVSN 1665
            YAPQAETANAVPVLCVARNVACNVRG FFKEFDENLL+ I E+FYEDE  NLP+ PDVSN
Sbjct: 365  YAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAPDVSN 424

Query: 1664 YLISEENGLAPNGNTSVPMSEGISGIEVDQKLPQVFPLPSKDDRLAVDSDANSATNIPDL 1485
            YL+SE+   APNG+T+ PMSEG++G+EV+++L Q       D++  VDS   S  N  DL
Sbjct: 425  YLMSEDANFAPNGSTNAPMSEGLNGLEVERRLNQ------SDEKCVVDSGLPSMKNSSDL 478

Query: 1484 RSET-------------PQQSIPSVPEGLLGIPNRRDVRTL----------SADPHNLKL 1374
            +SET             P   +PS   GLLG P RRD  ++          SA P    L
Sbjct: 479  KSETSLLPVAVASNATVPATVVPSQKPGLLGAPIRRDNSSMKHGFDLRNQNSAQP---PL 535

Query: 1373 PVQISQVSCLVEEDANKGFLSNRVFIPAQEPDVEKADKQRSHSGLLGHSSATPVSSAQYS 1194
            P    Q   +VEE+ N+   +NR    A              +GL  H+          S
Sbjct: 536  PKLHGQGGWIVEEEVNRVLPNNRPVSIA--------------TGLPSHA----------S 571

Query: 1193 RGSVDEANPAQEHPKQNLPASETTGVXXXXXXXXXXXXXXKDTIVDAVKVNALPPSLSIS 1014
            +   +EA  A +  KQNLP +                     T  +  K N LP  LSI 
Sbjct: 572  QAKGEEAIMAHDLHKQNLPPASQPPEIGVSQNHVSSNSREFQT--EGGKTNLLPSYLSIG 629

Query: 1013 VLQEIGRRCCSKVEFKLILSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHF 834
            VLQEIG+RC SKVEF+ ++STSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALH+
Sbjct: 630  VLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHY 689

Query: 833  LAEKYLAY-GMRSGLVDRD-DKLPAQNENGFVWDDINLQSDELSSHEKLHRENAFEAAEM 660
            LAEKY+AY   RSG +DRD DKL  +NENGF+WD I  +S+E    + L +E+  EA+E+
Sbjct: 690  LAEKYVAYITPRSGAMDRDFDKLSLENENGFLWDTIISESNEGLGEDGLRKESTPEASEV 749

Query: 659  APVSTSSMGIIQQAPKLANSPR 594
             P ST +    QQ  K  N P+
Sbjct: 750  EPGSTYASLGNQQVQKRPNVPK 771


>ref|XP_002528114.1| double-stranded RNA binding protein, putative [Ricinus communis]
            gi|223532503|gb|EEF34293.1| double-stranded RNA binding
            protein, putative [Ricinus communis]
          Length = 786

 Score =  452 bits (1162), Expect = e-124
 Identities = 266/502 (52%), Positives = 324/502 (64%), Gaps = 26/502 (5%)
 Frame = -3

Query: 1982 SRKSLLHVFQDGLCHPNMAMVIDDRLKVWEDKDQPRVHVVPAFTPYYAPQAETANAVPVL 1803
            SRKSL +VF +G+CHP MAMVIDDR KVWEDKDQPRVHVVPAFTPYYAPQAETANAVPVL
Sbjct: 282  SRKSLANVFHNGMCHPKMAMVIDDRSKVWEDKDQPRVHVVPAFTPYYAPQAETANAVPVL 341

Query: 1802 CVARNVACNVRGGFFKEFDENLLKKIFELFYEDEMSNLPSPPDVSNYLISEENGLAPNGN 1623
            CVARNVACNVRG FFKEFDENLL++I E+FYEDE++NLP  PDVSNYL+SE+    PNGN
Sbjct: 342  CVARNVACNVRGCFFKEFDENLLRRISEVFYEDEVNNLPLAPDVSNYLMSEDASFVPNGN 401

Query: 1622 TSVPMSEGISGIEVDQKLPQVFPLPSKDDRLAVDSDANSATNIPDLRSETPQQSI----- 1458
            ++ P +EG+SG+EV+++L Q       D++   DS ++S TN P+LRSE  Q  I     
Sbjct: 402  SNAPFNEGMSGVEVERRLNQ------SDEKSVTDSASHSMTNCPELRSEITQPPIAIIPN 455

Query: 1457 -----------PSVPEGLLGIPNRRDVR--TLSADPHNLKLPVQISQVSC------LVEE 1335
                       PS    LLG P RRD+R  T    P   ++P  +   S       LVEE
Sbjct: 456  VVGPMSSTPLLPSQKPSLLGTPVRRDLRNQTSGQPPLLSRVPAPLPSSSIQPQGGWLVEE 515

Query: 1334 DANKGFLSNRVFIPAQEPDVEKADKQRSHSGLLGHSSATPVSSAQYSRGSVDEANPAQEH 1155
            D ++  +++R    AQE D+ K+DK R+H     HS  TPVS++  S     +    +  
Sbjct: 516  DISRAHINSRSSGFAQESDILKSDKLRTHLNPFVHS--TPVSASTSSVFHASQVKGEEVC 573

Query: 1154 PKQNLPASETTGVXXXXXXXXXXXXXXKDTIVDAVKVNALPPSLSISVLQEIGRRCCSKV 975
             K  +  S+                  +++  +AVK N L   LSI VLQEIGRRC SKV
Sbjct: 574  LKGKVGVSQN-----------LVSSNSRESQNEAVKFNLLSSHLSIGVLQEIGRRCNSKV 622

Query: 974  EFKLILSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHFLAEKYLAY-GMRS 798
            EF+ ++STSKDLQFSVEVLFTGEKIG+GMGKTRKDA QQAAENAL  LAEKY+AY    S
Sbjct: 623  EFRSVVSTSKDLQFSVEVLFTGEKIGIGMGKTRKDAHQQAAENALRCLAEKYVAYITPHS 682

Query: 797  GLVDRD-DKLPAQNENGFVWDDINLQSDELSSHEKLHRENAFEAAEMAPVSTSSMGIIQQ 621
            G VD D DKL   NENGF+WD +N  S E    + + +E   E  E+ P  T S  + QQ
Sbjct: 683  GAVDHDFDKLSIGNENGFLWDIVNSGSSETVPEDGVTKERTPEDNEVEPGITLSNLVNQQ 742

Query: 620  APKLANSPRLQQSLSGKRSKEE 555
              K ANSPRLQQS+  KRSKEE
Sbjct: 743  QQKRANSPRLQQSIPNKRSKEE 764


>ref|XP_006429344.1| hypothetical protein CICLE_v10011105mg [Citrus clementina]
            gi|567873511|ref|XP_006429345.1| hypothetical protein
            CICLE_v10011105mg [Citrus clementina]
            gi|557531401|gb|ESR42584.1| hypothetical protein
            CICLE_v10011105mg [Citrus clementina]
            gi|557531402|gb|ESR42585.1| hypothetical protein
            CICLE_v10011105mg [Citrus clementina]
          Length = 755

 Score =  442 bits (1137), Expect = e-121
 Identities = 262/476 (55%), Positives = 308/476 (64%), Gaps = 25/476 (5%)
 Frame = -3

Query: 2024 SKQLLNRVVCVKSGSRKSLLHVFQDGLCHPNMAMVIDDRLKVWEDKDQPRVHVVPAFTPY 1845
            SKQLL+RVVCVKSGSRKSLL+VFQ GLCHP MAMVIDDR KVWEDKDQPRVHVVPAFTPY
Sbjct: 305  SKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPY 364

Query: 1844 YAPQAETANAVPVLCVARNVACNVRGGFFKEFDENLLKKIFELFYEDEMSNLPSPPDVSN 1665
            YAPQAETANAVPVLCVARNVACNVRG FFKEFDENLL+ I E+FYEDE  NLP+ PDVSN
Sbjct: 365  YAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAPDVSN 424

Query: 1664 YLISEENGLAPNGNTSVPMSEGISGIEVDQKLPQVFPLPSKDDRLAVDSDANSATNIPDL 1485
            YL+SE+   APNG+T+ PMSEG++G+EV+++L Q       D++  VDS   S  N  DL
Sbjct: 425  YLMSEDANFAPNGSTNAPMSEGLNGLEVERRLNQ------SDEKCVVDSGLPSMKNSSDL 478

Query: 1484 RSET-------------PQQSIPSVPEGLLGIPNRRDVRTL----------SADPHNLKL 1374
            +SET             P   +PS   GLLG P RRD  ++          SA P    L
Sbjct: 479  KSETSLLPVAVASNATVPATVVPSQKPGLLGAPIRRDNSSMKHGFDLRNQNSAQP---PL 535

Query: 1373 PVQISQVSCLVEEDANKGFLSNRVFIPAQEPDVEKADKQRSHSGLLGHSSATPVSSAQYS 1194
            P    Q   +VEE+ N+   +NR    A              +GL  H+          S
Sbjct: 536  PKLHGQGGWIVEEEVNRVLPNNRPVSIA--------------TGLPSHA----------S 571

Query: 1193 RGSVDEANPAQEHPKQNLPASETTGVXXXXXXXXXXXXXXKDTIVDAVKVNALPPSLSIS 1014
            +   +EA  A +  KQNLP +                     T  +  K N LP  LSI 
Sbjct: 572  QAKGEEAIMAHDLHKQNLPPASQPPEIGVSQNHVSSNSREFQT--EGGKTNLLPSYLSIG 629

Query: 1013 VLQEIGRRCCSKVEFKLILSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHF 834
            VLQEIG+RC SKVEF+ ++STSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALH+
Sbjct: 630  VLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHY 689

Query: 833  LAEKYLAY-GMRSGLVDRD-DKLPAQNENGFVWDDINLQSDELSSHEKLHRENAFE 672
            LAEKY+AY   RSG +DRD DKL  +NENGF+WD I  +S+E    + L +E+  E
Sbjct: 690  LAEKYVAYITPRSGAMDRDFDKLSLENENGFLWDTIISESNEGLGEDGLRKESTPE 745


>gb|EMJ06138.1| hypothetical protein PRUPE_ppa001155mg [Prunus persica]
          Length = 893

 Score =  441 bits (1133), Expect = e-121
 Identities = 279/576 (48%), Positives = 346/576 (60%), Gaps = 86/576 (14%)
 Frame = -3

Query: 2024 SKQLLNRVVCVKSGSRKSLLHVFQDGLCHPNMAMVIDDRLKVWEDKDQPRVHVVPAFTPY 1845
            SKQLL+RVVCVK+GSRKSLL+VFQ G+CHP MAMVIDDR KVWEDKDQPRVHVVPAFTPY
Sbjct: 305  SKQLLDRVVCVKTGSRKSLLNVFQHGVCHPKMAMVIDDRSKVWEDKDQPRVHVVPAFTPY 364

Query: 1844 YAPQAETANAVPVLCVARNVACNVRGGFFKEFDENLLKKIFELFYEDEMSNLPSPPDVSN 1665
            YAPQAETA+ VPVLCVARNVACNVRG FFKEFDE LL++I E+FYEDE+ NLP  PDVSN
Sbjct: 365  YAPQAETASPVPVLCVARNVACNVRGCFFKEFDEILLRRISEVFYEDEVVNLPPAPDVSN 424

Query: 1664 YLISEENGLAPNGNTSVPMSEGISGIEVDQKLPQVFPLPSKDDRLAVDSDANSATNIPDL 1485
            YL+SE+ GLA NGN + P+SEG++G EV +++ Q       DD+   DS A+S  N  + 
Sbjct: 425  YLMSEDAGLATNGNVNAPVSEGMNGGEVARRINQ------SDDKFGTDSVAHSLKNHAEA 478

Query: 1484 RSE----------------TPQQSIPSVPEGLLGIPNRRDV------------------- 1410
            RS+                + +  +PS   GLLG P RRD                    
Sbjct: 479  RSDNSPAPVAILPNVVGAASSRPVMPSQKPGLLGPPVRRDSFSDRDYEMKRGLLGTNPGL 538

Query: 1409 ----RTLSADPHNLKLPVQI------SQVSCLVEEDANKGFLSNRVFIPAQEPDVEKADK 1260
                +T +  PH  ++P Q+      +Q   LV++D N+G  SNR     Q PD+ K++K
Sbjct: 539  DMRNQTSAELPHLSRVPAQMPASSIHAQGGWLVDDDNNRGPPSNRPSGFVQPPDIIKSEK 598

Query: 1259 -------------------QRSHSGLL---------------GHSSATPVSS-----AQY 1197
                                   SG +                 S ATP S+     +  
Sbjct: 599  LVHQNPFNPATPSSTPSGPSNRPSGFVQPPDIIKSEKLVHQNPFSPATPSSTPSGLLSHK 658

Query: 1196 SRGSVDEANPAQEHPKQNLPASETTGVXXXXXXXXXXXXXXKDTIVDAVKVNALPPSLSI 1017
            S    +E    Q+  KQNLP    + +              +++ +++ KVN LP  LSI
Sbjct: 659  SDVKREEVCSGQDLQKQNLP--PPSQLSEAGASQNQASSFNRESHLESAKVNLLPSPLSI 716

Query: 1016 SVLQEIGRRCCSKVEFKLILSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALH 837
             VLQEIGRRC SKVEF+ ++STS DLQFSVEVLFTGEKIG GMG+TRKDAQQQAAENALH
Sbjct: 717  GVLQEIGRRCSSKVEFRSVVSTSNDLQFSVEVLFTGEKIGFGMGRTRKDAQQQAAENALH 776

Query: 836  FLAEKYLAY-GMRSGLVDRD-DKLPAQNENGFVWDDINLQSDELSSHEKLHRENAFEAAE 663
             LA+KY+AY   RSG VDRD DK+   NENGFV D +  +  EL   + + +E+  EAAE
Sbjct: 777  SLADKYVAYLAPRSGAVDRDIDKVSVGNENGFVLDIVGPELTELLMEDGMPKESTSEAAE 836

Query: 662  MAPVSTSSMGIIQQAPKLANSPRLQQSLSGKRSKEE 555
            + P ST  + + QQ  K A+SPRL QSL  KR KEE
Sbjct: 837  VEPGST-YITVSQQVQKRASSPRLLQSLPNKRLKEE 871


>ref|XP_006373979.1| hypothetical protein POPTR_0016s12200g [Populus trichocarpa]
            gi|550321330|gb|ERP51776.1| hypothetical protein
            POPTR_0016s12200g [Populus trichocarpa]
          Length = 765

 Score =  437 bits (1125), Expect = e-120
 Identities = 258/469 (55%), Positives = 306/469 (65%), Gaps = 31/469 (6%)
 Frame = -3

Query: 2024 SKQLLNRVVCVKSGSRKSLLHVFQDGLCHPNMAMVIDDRLKVWEDKDQPRVHVVPAFTPY 1845
            SKQL +RVVCVKSGS+KSLL+VFQDG+CHP MAMVIDDRLKVWED DQPRVHVVPAFTPY
Sbjct: 305  SKQLSDRVVCVKSGSKKSLLNVFQDGMCHPKMAMVIDDRLKVWEDMDQPRVHVVPAFTPY 364

Query: 1844 YAPQAETANAVPVLCVARNVACNVRGGFFKEFDENLLKKIFELFYEDEMSNLPSPPDVSN 1665
            YAP AETANAVPVLCVARNVACNVRG FFKEFDE L+++I E+FYEDE+ +LP  PDVSN
Sbjct: 365  YAPLAETANAVPVLCVARNVACNVRGCFFKEFDEILIRRISEVFYEDEVKSLPPTPDVSN 424

Query: 1664 YLISEENGLAPNGNTSVPMSEGISGIEVDQKLPQVFPLPSKDDRLAVDSDANSATNIPDL 1485
            Y+++E++G  PNGN   P SEG+SGIE +++L Q       D +  ++S  +S TN  +L
Sbjct: 425  YMMTEDSGFVPNGNNIAPFSEGMSGIEAERRLHQ------SDGKTVMESAPHSITNSAEL 478

Query: 1484 RSETPQQSI----------------PSVPEGLLGIPNRRDVRT--------LSADPHNLK 1377
            R+E  Q ++                PS    LLG P RRD+R         LS  P  + 
Sbjct: 479  RTEISQPNVAIIPNVAGPTLSATLLPSQKPSLLGAPVRRDLRNQNSAQPPLLSRIPAAIP 538

Query: 1376 LPVQISQVSCLVEEDANKGFLSNRVFIPAQEPDVEKADKQRSHSGLLGH--SSATPVSSA 1203
            L     Q   LVEED ++   +NR    AQE D  K+DK R     L H  S++ P  S+
Sbjct: 539  LSSLQPQGGWLVEEDTSRAQSNNRPSATAQELDSLKSDKLRGLQNPLAHGASASAPAPSS 598

Query: 1202 QYSRGS---VDEANPAQEHPKQNLPASETTGVXXXXXXXXXXXXXXKDTIVDAVKVNALP 1032
              S  S   V+EA    +  KQ +PA E                  ++   +A K+N LP
Sbjct: 599  LVSHSSELKVEEAIAGNDMHKQIVPAGEA------GMSQNHVSSSSREFQAEAGKLNLLP 652

Query: 1031 PSLSISVLQEIGRRCCSKVEFKLILSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAA 852
              LSI VLQEIGRRC SKVEFK ++STSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAA
Sbjct: 653  SHLSIGVLQEIGRRCRSKVEFKSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAA 712

Query: 851  ENALHFLAEKYLAY-GMRSGLVDRD-DKLPAQNENGFVWDDINLQSDEL 711
            ENAL  LAEKY AY    SG VD D DKL   NENGFVWD  + +S +L
Sbjct: 713  ENALRSLAEKYAAYVSPNSGAVDGDFDKLSIGNENGFVWDISSPESSDL 761


>gb|ESW12356.1| hypothetical protein PHAVU_008G105400g [Phaseolus vulgaris]
          Length = 834

 Score =  431 bits (1109), Expect = e-118
 Identities = 269/541 (49%), Positives = 335/541 (61%), Gaps = 53/541 (9%)
 Frame = -3

Query: 2021 KQLLNRVVCVKSGSRKSLLHVFQDGLCHPNMAMVIDDRLKVWEDKDQPRVHVVPAFTPYY 1842
            KQ+L RV+CVKSGSRKSL +VFQDG+CHP MAMVIDDR KVWEDKDQPRVHVVPAFTPYY
Sbjct: 307  KQILERVICVKSGSRKSLPNVFQDGMCHPKMAMVIDDRSKVWEDKDQPRVHVVPAFTPYY 366

Query: 1841 APQAETANAVPVLCVARNVACNVRGGFFKEFDENLLKKIFELFYEDEMSNLPSPPDVSNY 1662
            APQAETANAVPVLCVARNVACNVRG FFKEFDE+LL++I E+F+ED++  LP PPDVSNY
Sbjct: 367  APQAETANAVPVLCVARNVACNVRGCFFKEFDESLLQRIAEIFFEDDIGILPHPPDVSNY 426

Query: 1661 LISEENGLAPNGNTSVPMSEGISGIEVDQKLPQVFPLPSKDDRLAVDSDANSATNIPDLR 1482
            L+SE+    PNGNT+ P+SEGI+G EV+++L Q        D+  VD       N  + R
Sbjct: 427  LMSED---VPNGNTNAPLSEGINGAEVERRLSQ------PGDKFPVDMVTQPMANSVEFR 477

Query: 1481 SETPQQS----------------IPSVPEGLLGIPNRR---------------------- 1416
             E  Q +                IPS+  GLLG P +                       
Sbjct: 478  HEASQPTAGIISSVTGPGSSRILIPSLKPGLLGPPVKHEASSVDRDYDMRKGVLGMRHGP 537

Query: 1415 DVR-TLSADPHNLKLPVQISQVSC--------LVEEDANKGFLSNRVFIPA-QEPDVEKA 1266
            D+R  +SA+P  +  P   +  S         LVE+D      +N   I + +E  + K+
Sbjct: 538  DIRGQISAEPPLISRPPNQASASLMPQSFGGGLVEDDITSRTQTNNWSIASGKESSLVKS 597

Query: 1265 DKQRSHSGLLGHS---SATPVSSAQYSRGSVDEANPAQEHPKQNLPASETTGVXXXXXXX 1095
            DK ++      HS   S + V   Q S+   +EA    + P+QN P+     +       
Sbjct: 598  DKHQAQLKPFSHSVIGSPSNVVHQQASQLKTEEATSVSDLPRQNAPSKSL--LSEDGISQ 655

Query: 1094 XXXXXXXKDTIVDAVKVNALPPSLSISVLQEIGRRCCSKVEFKLILSTSKDLQFSVEVLF 915
                   KD   +A K+N LPP LSI VLQEIGRRC SKVEFK ILSTSKDLQFSVEVLF
Sbjct: 656  NHASSNSKDLQNEAGKLNLLPP-LSIQVLQEIGRRCNSKVEFKSILSTSKDLQFSVEVLF 714

Query: 914  TGEKIGVGMGKTRKDAQQQAAENALHFLAEKYLAY-GMRSGLVDRD-DKLPAQNENGFVW 741
            TGEKIGVGMG+TRKDAQQQAAENAL  LAEKY+A+   +  +VDR+ DKL    +NGF+W
Sbjct: 715  TGEKIGVGMGRTRKDAQQQAAENALRSLAEKYVAHVEPQCRVVDREFDKLSLGRDNGFLW 774

Query: 740  DDINLQSDELSSHEKLHRENAFEAAEMAPVSTSSMGIIQQAPKLANSPRLQQSLSGKRSK 561
            D +N +S+EL   + + RENA EA++    S++   I QQ  K  +SPR+  S+S KR K
Sbjct: 775  DVVNPESNELRREDGVPRENASEASDAETRSSTPNAINQQMEKRISSPRM-ASVSNKRLK 833

Query: 560  E 558
            E
Sbjct: 834  E 834


>gb|EOY07247.1| RNA polymerase II C-terminal domain phosphatase-like 2 isoform 4
            [Theobroma cacao]
          Length = 812

 Score =  431 bits (1109), Expect = e-118
 Identities = 267/518 (51%), Positives = 320/518 (61%), Gaps = 67/518 (12%)
 Frame = -3

Query: 2024 SKQLLNRVVCVKSGSRKSLLHVFQDGLCHPNMAMVIDDRLKVWEDKDQPRVHVVPAFTPY 1845
            SKQLL+RVVCVKSGSRKSLL+VF+DG CHP MAMVIDDR KVWEDKDQPRVHVVP F PY
Sbjct: 305  SKQLLDRVVCVKSGSRKSLLNVFRDGKCHPQMAMVIDDRSKVWEDKDQPRVHVVPPFAPY 364

Query: 1844 YAPQAETANAVPVLCVARNVACNVRGGFFKEFDENLLKKIFELFYEDEMSNLPSPPDVSN 1665
            YAPQAETANAVPVLCVARNVACNVRG FFKEFDEN+++KI E+FYEDE+ NLP  PDVSN
Sbjct: 365  YAPQAETANAVPVLCVARNVACNVRGLFFKEFDENVIRKISEVFYEDEVVNLPLAPDVSN 424

Query: 1664 YLISEENGLAPNGNTSVPMSEGISGIEVDQKLPQVFPLPSKDDRLAVDSDANSATNIPDL 1485
            +L+ E+ G APNGN   P+SEG++G+EV+++L Q+      +++   DS  +   N P+L
Sbjct: 425  HLMLEDAGFAPNGNGGAPISEGMNGVEVERRLNQL------EEKHVSDSSTHLVMNNPEL 478

Query: 1484 RSETPQQSIPSVPE----------------------GLLGIPN------RRDVRTLSAD- 1392
            R ET Q  +  VP                       GLL  P       RR+  T+ +D 
Sbjct: 479  RYETSQPPVAIVPNVVGPASLTAPLPSQKPSLLGAPGLLSAPTLLGASVRRESNTIDSDY 538

Query: 1391 -----------------------PHNLKLPVQISQVSCL------VEEDANKGFLSNRVF 1299
                                   P   K+P QIS  S L      VEED NK  L++R  
Sbjct: 539  DMKRRALGSKQTLDLRNQSSVQPPLLSKVPAQISSSSILPQGGWLVEEDNNKAHLNDRSS 598

Query: 1298 IPAQEPDVEKADKQRSHSGLLGHSSATPVSSAQYSRGS---VDEANPAQEHPKQNLPA-- 1134
              AQE D  K+DK R+ +    HS+   VS+   S  S   V+EA+   +  KQN+P   
Sbjct: 599  GSAQEFDATKSDKLRNQNPF-SHSAPGSVSTGLPSHASQVKVEEAHAGLDTQKQNVPPAG 657

Query: 1133 --SETTGVXXXXXXXXXXXXXXKDTIVDAVKVNALPPSLSISVLQEIGRRCCSKVEFKLI 960
              SE  G                 +  +  K+N LP  LSISVLQEIGRRC SKVEF+ +
Sbjct: 658  HLSEIGGTQNHV------------SSTEGGKLNLLPSHLSISVLQEIGRRCGSKVEFRTV 705

Query: 959  LSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHFLAEKYLAY-GMRSGLVDR 783
            +STSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAE ALH LAEKYLAY   RSG VDR
Sbjct: 706  VSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAELALHNLAEKYLAYIAPRSGAVDR 765

Query: 782  D-DKLPAQNENGFVWDDINLQSDELSSHEKLHRENAFE 672
            D +KL    ENGF+W D+N  S E    + L +++  E
Sbjct: 766  DFNKLSLGTENGFLW-DVNPASSEALREDGLPKDSTSE 802


>gb|EOY07245.1| RNA polymerase II C-terminal domain phosphatase-like 2 isoform 2
            [Theobroma cacao]
          Length = 840

 Score =  431 bits (1109), Expect = e-118
 Identities = 267/518 (51%), Positives = 320/518 (61%), Gaps = 67/518 (12%)
 Frame = -3

Query: 2024 SKQLLNRVVCVKSGSRKSLLHVFQDGLCHPNMAMVIDDRLKVWEDKDQPRVHVVPAFTPY 1845
            SKQLL+RVVCVKSGSRKSLL+VF+DG CHP MAMVIDDR KVWEDKDQPRVHVVP F PY
Sbjct: 305  SKQLLDRVVCVKSGSRKSLLNVFRDGKCHPQMAMVIDDRSKVWEDKDQPRVHVVPPFAPY 364

Query: 1844 YAPQAETANAVPVLCVARNVACNVRGGFFKEFDENLLKKIFELFYEDEMSNLPSPPDVSN 1665
            YAPQAETANAVPVLCVARNVACNVRG FFKEFDEN+++KI E+FYEDE+ NLP  PDVSN
Sbjct: 365  YAPQAETANAVPVLCVARNVACNVRGLFFKEFDENVIRKISEVFYEDEVVNLPLAPDVSN 424

Query: 1664 YLISEENGLAPNGNTSVPMSEGISGIEVDQKLPQVFPLPSKDDRLAVDSDANSATNIPDL 1485
            +L+ E+ G APNGN   P+SEG++G+EV+++L Q+      +++   DS  +   N P+L
Sbjct: 425  HLMLEDAGFAPNGNGGAPISEGMNGVEVERRLNQL------EEKHVSDSSTHLVMNNPEL 478

Query: 1484 RSETPQQSIPSVPE----------------------GLLGIPN------RRDVRTLSAD- 1392
            R ET Q  +  VP                       GLL  P       RR+  T+ +D 
Sbjct: 479  RYETSQPPVAIVPNVVGPASLTAPLPSQKPSLLGAPGLLSAPTLLGASVRRESNTIDSDY 538

Query: 1391 -----------------------PHNLKLPVQISQVSCL------VEEDANKGFLSNRVF 1299
                                   P   K+P QIS  S L      VEED NK  L++R  
Sbjct: 539  DMKRRALGSKQTLDLRNQSSVQPPLLSKVPAQISSSSILPQGGWLVEEDNNKAHLNDRSS 598

Query: 1298 IPAQEPDVEKADKQRSHSGLLGHSSATPVSSAQYSRGS---VDEANPAQEHPKQNLPA-- 1134
              AQE D  K+DK R+ +    HS+   VS+   S  S   V+EA+   +  KQN+P   
Sbjct: 599  GSAQEFDATKSDKLRNQNPF-SHSAPGSVSTGLPSHASQVKVEEAHAGLDTQKQNVPPAG 657

Query: 1133 --SETTGVXXXXXXXXXXXXXXKDTIVDAVKVNALPPSLSISVLQEIGRRCCSKVEFKLI 960
              SE  G                 +  +  K+N LP  LSISVLQEIGRRC SKVEF+ +
Sbjct: 658  HLSEIGGTQNHV------------SSTEGGKLNLLPSHLSISVLQEIGRRCGSKVEFRTV 705

Query: 959  LSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHFLAEKYLAY-GMRSGLVDR 783
            +STSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAE ALH LAEKYLAY   RSG VDR
Sbjct: 706  VSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAELALHNLAEKYLAYIAPRSGAVDR 765

Query: 782  D-DKLPAQNENGFVWDDINLQSDELSSHEKLHRENAFE 672
            D +KL    ENGF+W D+N  S E    + L +++  E
Sbjct: 766  DFNKLSLGTENGFLW-DVNPASSEALREDGLPKDSTSE 802


>ref|XP_006481010.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            2-like isoform X5 [Citrus sinensis]
          Length = 770

 Score =  428 bits (1101), Expect = e-117
 Identities = 264/517 (51%), Positives = 314/517 (60%), Gaps = 25/517 (4%)
 Frame = -3

Query: 2024 SKQLLNRVVCVKSGSRKSLLHVFQDGLCHPNMAMVIDDRLKVWEDKDQPRVHVVPAFTPY 1845
            SKQLL+RVVCVKSGSRKSLL+VFQ GLCHP MAMVIDDR KVWEDKDQPRVHVVPAFTPY
Sbjct: 305  SKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPY 364

Query: 1844 YAPQAETANAVPVLCVARNVACNVRGGFFKEFDENLLKKIFELFYEDEMSNLPSPPDVSN 1665
            YAPQAETANAVPVLCVARNVACNVRG FFKEFDENLL+ I E+FYEDE  NLP+ PDVSN
Sbjct: 365  YAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAPDVSN 424

Query: 1664 YLISEENGLAPNGNTSVPMSEGISGIEVDQKLPQVFPLPSKDDRLAVDSDANSATNIPDL 1485
            YL+SE+   APNG+T+ PMSEG++G+EV+++L Q       D++  VDS   S  N  DL
Sbjct: 425  YLMSEDANFAPNGSTNAPMSEGLNGLEVERRLNQ------SDEKYVVDSGLPSMKNSSDL 478

Query: 1484 RSET-------------PQQSIPSVPEGLLGIPNRRDVRTL----------SADPHNLKL 1374
            +SET             P   +PS   GLLG P RRD  ++          SA P    L
Sbjct: 479  KSETSLLPVAVASNATVPATVVPSQKPGLLGAPIRRDNSSMKHGFDLRNQNSAQP---PL 535

Query: 1373 PVQISQVSCLVEEDANKGFLSNRVFIPAQEPDVEKADKQRSHSGLLGHSSATPVSSAQYS 1194
            P    Q   +VEE+ N+   +NR    A              +GL  H+          S
Sbjct: 536  PKLHGQGGWIVEEEVNRVLPNNRPVSIA--------------TGLPSHA----------S 571

Query: 1193 RGSVDEANPAQEHPKQNLPASETTGVXXXXXXXXXXXXXXKDTIVDAVKVNALPPSLSIS 1014
            +   +EA  A +  KQNLP +                     T  +  K N LP  LSI 
Sbjct: 572  QAKGEEAIMAHDLHKQNLPPASQPPEIGVSQNHVSSNSREFQT--EGGKTNLLPSYLSIG 629

Query: 1013 VLQEIGRRCCSKVEFKLILSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHF 834
            VLQEIG+RC SK                  VLFTGEKIGVGMGKTRKDAQQQAAENALH+
Sbjct: 630  VLQEIGKRCSSK------------------VLFTGEKIGVGMGKTRKDAQQQAAENALHY 671

Query: 833  LAEKYLAY-GMRSGLVDRD-DKLPAQNENGFVWDDINLQSDELSSHEKLHRENAFEAAEM 660
            LAEKY+AY   RSG +DRD DKL  +NENGF+WD I  +S+E    + L +E+  EA+E+
Sbjct: 672  LAEKYVAYITPRSGAMDRDFDKLSLENENGFLWDTIISESNEGLGEDGLRKESTPEASEV 731

Query: 659  APVSTSSMGIIQQAPKLANSPRLQQSLSGKRSKEETP 549
             P ST +    QQ  K  N P+L + +  KR K+E P
Sbjct: 732  EPGSTYASLGNQQVQKRPNVPKLSKLIPSKRLKDEPP 768


>gb|EOY07246.1| RNA polymerase II C-terminal domain phosphatase-like 2 isoform 3
            [Theobroma cacao]
          Length = 841

 Score =  427 bits (1097), Expect = e-116
 Identities = 267/519 (51%), Positives = 320/519 (61%), Gaps = 68/519 (13%)
 Frame = -3

Query: 2024 SKQLLNRVVCVKSGSRKSLLHVFQDGLCHPNMAMVIDDRLKVWEDKDQPRVHVVPAFTPY 1845
            SKQLL+RVVCVKSGSRKSLL+VF+DG CHP MAMVIDDR KVWEDKDQPRVHVVP F PY
Sbjct: 305  SKQLLDRVVCVKSGSRKSLLNVFRDGKCHPQMAMVIDDRSKVWEDKDQPRVHVVPPFAPY 364

Query: 1844 YAPQAETANAVPVLCVARNVACNVRGGFFKEFDENLLKKIFELFYEDEMSNLPSPPDVSN 1665
            YAPQAETANAVPVLCVARNVACNVRG FFKEFDEN+++KI E+FYEDE+ NLP  PDVSN
Sbjct: 365  YAPQAETANAVPVLCVARNVACNVRGLFFKEFDENVIRKISEVFYEDEVVNLPLAPDVSN 424

Query: 1664 YLISEENGLAPNGNTSVPMSEGISGIEVDQKLPQVFPLPSKDDRLAVDSDANSATNIPDL 1485
            +L+ E+ G APNGN   P+SEG++G+EV+++L Q+      +++   DS  +   N P+L
Sbjct: 425  HLMLEDAGFAPNGNGGAPISEGMNGVEVERRLNQL------EEKHVSDSSTHLVMNNPEL 478

Query: 1484 RSETPQQSIPSVPE----------------------GLLGIPN------RRDVRTLSAD- 1392
            R ET Q  +  VP                       GLL  P       RR+  T+ +D 
Sbjct: 479  RYETSQPPVAIVPNVVGPASLTAPLPSQKPSLLGAPGLLSAPTLLGASVRRESNTIDSDY 538

Query: 1391 -----------------------PHNLKLPVQISQVSCL------VEEDANKGFLSNRVF 1299
                                   P   K+P QIS  S L      VEED NK  L++R  
Sbjct: 539  DMKRRALGSKQTLDLRNQSSVQPPLLSKVPAQISSSSILPQGGWLVEEDNNKAHLNDRSS 598

Query: 1298 IPAQEPDVEKADKQRSHSGLLGHSSATPVSSAQYSRGS---VDEANPAQEHPKQNLPA-- 1134
              AQE D  K+DK R+ +    HS+   VS+   S  S   V+EA+   +  KQN+P   
Sbjct: 599  GSAQEFDATKSDKLRNQNPF-SHSAPGSVSTGLPSHASQVKVEEAHAGLDTQKQNVPPAG 657

Query: 1133 --SETTGVXXXXXXXXXXXXXXKDTIVDAVKVNALPPSLSISVLQEIGRRCCSK-VEFKL 963
              SE  G                 +  +  K+N LP  LSISVLQEIGRRC SK VEF+ 
Sbjct: 658  HLSEIGGTQNHV------------SSTEGGKLNLLPSHLSISVLQEIGRRCGSKKVEFRT 705

Query: 962  ILSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHFLAEKYLAY-GMRSGLVD 786
            ++STSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAE ALH LAEKYLAY   RSG VD
Sbjct: 706  VVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAELALHNLAEKYLAYIAPRSGAVD 765

Query: 785  RD-DKLPAQNENGFVWDDINLQSDELSSHEKLHRENAFE 672
            RD +KL    ENGF+W D+N  S E    + L +++  E
Sbjct: 766  RDFNKLSLGTENGFLW-DVNPASSEALREDGLPKDSTSE 803


>ref|XP_004302639.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            2-like [Fragaria vesca subsp. vesca]
          Length = 850

 Score =  424 bits (1091), Expect = e-116
 Identities = 271/541 (50%), Positives = 327/541 (60%), Gaps = 50/541 (9%)
 Frame = -3

Query: 2027 NSKQLLNRVVCVKSGSRKSLLHVFQDGLCHPNMAMVIDDRLKVWEDKDQPRVHVVPAFTP 1848
            +SKQLL+RVVCVKSGSRKSLL+VFQ G CHP MAMVIDDR  VWEDKDQPRVHVVPAFTP
Sbjct: 304  SSKQLLDRVVCVKSGSRKSLLNVFQHGTCHPKMAMVIDDRSNVWEDKDQPRVHVVPAFTP 363

Query: 1847 YYAPQAETANAVPVLCVARNVACNVRGGFFKEFDENLLKKIFELFYEDEMSNLPSPPDVS 1668
            YYAPQAETA+ VPVLCVARNVACNVRG FFKEFDE  L++I E+FYEDE+ NLP  PDVS
Sbjct: 364  YYAPQAETASPVPVLCVARNVACNVRGCFFKEFDEIFLRRISEIFYEDEVVNLPPSPDVS 423

Query: 1667 NYLISEENGLAPNGNTSVPMSEGISGIEVDQKLPQVFPLPSKDDRLAVDSDANSATNIPD 1488
            NYLISE+ G  PNG    P+SEG+ G EV+++L Q       DD+  +D+ A+S  N  +
Sbjct: 424  NYLISEDAGFVPNG--IAPLSEGMHGGEVERRLNQ------HDDKGVMDTLAHS--NHAE 473

Query: 1487 LRSETPQQSIPSVP---------------------------------------EGLLGIP 1425
            LR +  Q+ + +VP                                        GLLG  
Sbjct: 474  LRLDNSQKPVLTVPVPNVPGVTSLRPVMPAYKPGLLGPLVRRDSFSDRENKMKRGLLGTN 533

Query: 1424 NRRDVRTLSAD--PHNLKLPVQIS------QVSCLVEEDANKGFLSNRVFIPAQEPDVEK 1269
               D+ + S+   P + ++P Q S      Q   LV++D  +G  S R    AQE DV K
Sbjct: 534  PCLDINSQSSGEPPQSSRVPAQTSASTVHTQGGWLVDDDKRRGNSSFRPPGSAQESDVLK 593

Query: 1268 ADKQRSHSGL-LGHSSATPVSSAQYSRGSVDEANPAQEHPKQNLPASETTGVXXXXXXXX 1092
             +K    +   L   SA  V  +Q S    +E +      KQNLP               
Sbjct: 594  PEKLVYQNPFSLNKPSAPVVLPSQTSEARREEVSSGHNFQKQNLPFPSLLSEGGVSQNQA 653

Query: 1091 XXXXXXKDTIVDAVKVNALPPSLSISVLQEIGRRCCSKVEFKLILSTSKDLQFSVEVLFT 912
                       ++ KVNALP  LSI VLQEIGRRC SKVEFK ++STS DLQFS EVLFT
Sbjct: 654  SFLKN------ESGKVNALPSPLSIGVLQEIGRRCSSKVEFKAVISTSNDLQFSFEVLFT 707

Query: 911  GEKIGVGMGKTRKDAQQQAAENALHFLAEKYLAY-GMRSGLVDRD-DKLPAQNENGFVWD 738
            GEKIG G G+TRKDAQQQAAENALH LAEKY++Y   R+G V++D DKL   +ENGFV D
Sbjct: 708  GEKIGFGTGRTRKDAQQQAAENALHSLAEKYVSYMAPRTGAVNKDFDKLSLGSENGFVVD 767

Query: 737  DINLQSDELSSHEKLHRENAFEAAEMAPVSTSSMGIIQQAPKLANSPRLQQSLSGKRSKE 558
             +   S E+   + L +E+  EA+E  P S SS+   QQ  K ANSPRL Q +S KRSKE
Sbjct: 768  IVGPGSAEVLMDDGLPKESISEASEGEPAS-SSIAASQQVQKRANSPRLLQPVSYKRSKE 826

Query: 557  E 555
            E
Sbjct: 827  E 827


>ref|XP_003623236.1| RNA polymerase II C-terminal domain phosphatase-like protein
            [Medicago truncatula] gi|355498251|gb|AES79454.1| RNA
            polymerase II C-terminal domain phosphatase-like protein
            [Medicago truncatula]
          Length = 796

 Score =  419 bits (1076), Expect = e-114
 Identities = 248/501 (49%), Positives = 321/501 (64%), Gaps = 25/501 (4%)
 Frame = -3

Query: 2024 SKQLLNRVVCVKSGSRKSLLHVFQDGLCHPNMAMVIDDRLKVWEDKDQPRVHVVPAFTPY 1845
            SKQ+ +RV+CVKSGSRKSLL+VF DG+CHP MAMVIDDR KVWEDKDQPRVHVVPAFTPY
Sbjct: 305  SKQVFDRVICVKSGSRKSLLNVFHDGMCHPKMAMVIDDRSKVWEDKDQPRVHVVPAFTPY 364

Query: 1844 YAPQAETANAVPVLCVARNVACNVRGGFFKEFDENLLKKIFELFYEDEMSNLPSPPDVSN 1665
            YAPQAETANAVPVLCVARNVACNVRG FFKEFDEN L++I E+F+EDE+ +LP PPDVS+
Sbjct: 365  YAPQAETANAVPVLCVARNVACNVRGCFFKEFDENYLQRIAEIFFEDEVGSLPHPPDVSS 424

Query: 1664 YLISEENGLAPNGNTSVPMSEGISGIEVDQKLPQVFPLPSKDDRLAVDSDANSATNIPDL 1485
            YL+SEE    PNGN + P+SEG++G EV+++L Q       DD+L+ D  +    N  + 
Sbjct: 425  YLMSEE---VPNGNGNAPISEGMAGAEVERRLNQ------PDDKLSADLVSRPMVNSVEF 475

Query: 1484 RSETPQQSIPSVPEGLLG-------IPNRRDVRTL------------SADPHNLKLPVQI 1362
            R ET Q +    P  + G       IP+++   T+            SA+P  +  P   
Sbjct: 476  RHETSQPTAGITP-NVAGPGSSRPLIPSQKPGLTINYEAWSRLRGQSSAEPPLISRPPIP 534

Query: 1361 SQVSCLVEED-ANKGFLSNRVFIPAQEPDVEKADKQRSHSGLLGHS---SATPVSSAQYS 1194
            S    LV++D +NK   +N  F  A+E ++ K++K ++      H    SA+ V  +Q S
Sbjct: 535  SYGGWLVDDDISNKTQTNNWPFASAKESNLPKSEKHQAQPKPFSHRMEVSASTVPLSQAS 594

Query: 1193 RGSVDEANPAQEHPKQNLPASETTGVXXXXXXXXXXXXXXKDTIVDAVKVNALPPSLSIS 1014
            +   +EA    +  ++N+P+                            +V    PSLSI 
Sbjct: 595  KLKAEEATSVSDFQRRNIPSKSRLTEDVISPNHTSSNSKDFQN-----EVGKFDPSLSIG 649

Query: 1013 VLQEIGRRCCSKVEFKLILSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHF 834
            VLQEIG+RC SKVEFK I+STSKDLQFSVEVLFTGEKIG GMG+TRKDAQQQAAENAL  
Sbjct: 650  VLQEIGKRCSSKVEFKPIVSTSKDLQFSVEVLFTGEKIGFGMGRTRKDAQQQAAENALRS 709

Query: 833  LAEKYLAY-GMRSGLVDRD-DKLPAQNENGFVWDDINLQSDELSSHEKLHRENAFEAAEM 660
            LAEKYL +   +S  V+ + DKL  ++ENGF+WD +N +S EL + + L RE+A EA++ 
Sbjct: 710  LAEKYLGHMEPQSKAVNTEFDKLSIEHENGFLWDVVNPESVELQTEDGLQRESASEASDA 769

Query: 659  APVSTSSMGIIQQAPKLANSP 597
              +  +   I QQ  K A+ P
Sbjct: 770  ETLPLNPNPINQQIEKRASFP 790