BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00000390
         (1460 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citr...   323   9e-86
gb|EMJ06843.1| hypothetical protein PRUPE_ppa009295mg [Prunus pe...   318   3e-84
ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarp...   317   8e-84
ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   315   4e-83
ref|XP_002326357.1| predicted protein [Populus trichocarpa] gi|5...   310   8e-82
sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,...   308   5e-81
gb|EXC16209.1| 29 kDa ribonucleoprotein B [Morus notabilis]           307   8e-81
ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop...   304   7e-80
gb|AAA79045.1| 24 kDa RNA binding protein, partial [Spinacia ole...   302   2e-79
ref|XP_003535181.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor...   301   4e-79
sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, c...   300   8e-79
ref|XP_006428768.1| hypothetical protein CICLE_v10012331mg [Citr...   300   1e-78
ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ri...   300   1e-78
ref|XP_006428770.1| hypothetical protein CICLE_v10012331mg [Citr...   299   2e-78
ref|XP_004497514.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   298   4e-78
ref|XP_006428767.1| hypothetical protein CICLE_v10012331mg [Citr...   298   5e-78
ref|XP_006428769.1| hypothetical protein CICLE_v10012331mg [Citr...   296   1e-77
gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]    296   1e-77
ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis th...   295   4e-77
ref|XP_006846809.1| hypothetical protein AMTR_s00148p00072380 [A...   294   6e-77

>ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
           gi|568855826|ref|XP_006481497.1| PREDICTED:
           ribonucleoprotein At2g37220, chloroplastic-like [Citrus
           sinensis] gi|557530828|gb|ESR42011.1| hypothetical
           protein CICLE_v10012331mg [Citrus clementina]
          Length = 282

 Score =  323 bits (829), Expect = 9e-86
 Identities = 176/265 (66%), Positives = 211/265 (79%), Gaps = 6/265 (2%)
 Frame = +1

Query: 100 FTSNPTTKPQIPYLSFFSSHPSITSPLN-SLSFL-SFKRSQSLSSRFIQNVAVSPKFGQE 273
           + S PT+      LS  SSH  +  P++ S SF+ SF+   S  SRF++NVAVS +F QE
Sbjct: 22  YNSKPTS---FSLLSSSSSHKLLAKPISISSSFIHSFQPLPSSPSRFVRNVAVSSEFDQE 78

Query: 274 ADVLLSEDDLEQPEFSPDLKLFVGNLPFSVDSAELASLFGSAGNVEMVEVIYDKITRRSR 453
            D+L  ED      FSPDLKLFVGNLPFSVDSA+LA LF +AGNVEMVEVIYDK+T RSR
Sbjct: 79  EDLLSDEDG---SNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSR 135

Query: 454 GFGFVTMSTVEEVEAAAQQFNGYELEGRSLRVNAG-PPPKKDEFAPRGGKGGSS---FEN 621
           GFGFVTMS+VEEVEAAAQQFNGYELEGR LRVN+G PPP+++EF+PRG +GG +      
Sbjct: 136 GFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAGAPSSG 195

Query: 622 PNRIYVGNLSWKVDDAALKTLFSELGDVLEAKVIYDRDSGRSRGFGFVTYSSSDEVNNAI 801
            NR+YVGNLSW VDD AL+TLF E G VLEAKV+YDR+SGRSRGFGFVTYSS++EV+NAI
Sbjct: 196 GNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAI 255

Query: 802 ESLDGVDLNGRSIRVTAAESRPKRR 876
           +SL+GVDL GR+IRV+ AE+RP+RR
Sbjct: 256 DSLNGVDLAGRAIRVSVAEARPQRR 280



 Score = 84.3 bits (207), Expect = 1e-13
 Identities = 44/97 (45%), Positives = 60/97 (61%)
 Frame = +1

Query: 604 GSSFENPNRIYVGNLSWKVDDAALKTLFSELGDVLEAKVIYDRDSGRSRGFGFVTYSSSD 783
           GS+F    +++VGNL + VD A L  LF   G+V   +VIYD+ +GRSRGFGFVT SS +
Sbjct: 87  GSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVE 146

Query: 784 EVNNAIESLDGVDLNGRSIRVTAAESRPKRRY*SENG 894
           EV  A +  +G +L GR +RV +    P+R   S  G
Sbjct: 147 EVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRG 183


>gb|EMJ06843.1| hypothetical protein PRUPE_ppa009295mg [Prunus persica]
          Length = 298

 Score =  318 bits (816), Expect = 3e-84
 Identities = 168/262 (64%), Positives = 208/262 (79%), Gaps = 2/262 (0%)
 Frame = +1

Query: 100 FTSNPTTKPQIPYLSFFSSHPSI-TSPLN-SLSFLSFKRSQSLSSRFIQNVAVSPKFGQE 273
           +T  PT+   +P+ S  SS  ++   P++ S SFL+  R QS SSRF++NVAVS +F Q+
Sbjct: 43  YTPKPTS---VPFYSVSSSSLTLGCKPISISASFLNSGRFQSASSRFVRNVAVSSEFEQD 99

Query: 274 ADVLLSEDDLEQPEFSPDLKLFVGNLPFSVDSAELASLFGSAGNVEMVEVIYDKITRRSR 453
            +VL    D  +  F+PDLKLFVGNLPFSVDSA+LA LF SAGNVEMVEVIYDK T RSR
Sbjct: 100 EEVL---SDDGEASFAPDLKLFVGNLPFSVDSAQLAGLFESAGNVEMVEVIYDKTTGRSR 156

Query: 454 GFGFVTMSTVEEVEAAAQQFNGYELEGRSLRVNAGPPPKKDEFAPRGGKGGSSFENPNRI 633
           GFGFVTMS+V+E E AA+Q NGYEL+GR+LRVN GPPP + E + RG +GG   ++ NR+
Sbjct: 157 GFGFVTMSSVQEAEGAARQLNGYELDGRALRVNYGPPPPRSEDSFRGARGGGGSDSSNRL 216

Query: 634 YVGNLSWKVDDAALKTLFSELGDVLEAKVIYDRDSGRSRGFGFVTYSSSDEVNNAIESLD 813
           YVGNL+W VD+ AL+ LFSE G VLEAKV+YDRDSGRSRGFGFVTY ++DE+N+A+ESLD
Sbjct: 217 YVGNLAWGVDNLALENLFSEQGKVLEAKVVYDRDSGRSRGFGFVTYGTADEMNSAMESLD 276

Query: 814 GVDLNGRSIRVTAAESRPKRRY 879
           GVDLNGRSIRVTAAE RP+R++
Sbjct: 277 GVDLNGRSIRVTAAEPRPRRQF 298


>ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarpa]
           gi|222868100|gb|EEF05231.1| 29 kDa ribonucleoprotein
           [Populus trichocarpa]
          Length = 273

 Score =  317 bits (812), Expect = 8e-84
 Identities = 161/248 (64%), Positives = 204/248 (82%), Gaps = 2/248 (0%)
 Frame = +1

Query: 142 SFFSSHPSITSPLNSLSFL-SFKRSQS-LSSRFIQNVAVSPKFGQEADVLLSEDDLEQPE 315
           S F   PS TS L  +S L SF+  Q  LSSRF++NVA+S +FGQE D L    D ++  
Sbjct: 29  SLFFLSPSSTSSLKPVSLLLSFQHQQQPLSSRFLKNVAISSEFGQEEDFL---SDGDEQS 85

Query: 316 FSPDLKLFVGNLPFSVDSAELASLFGSAGNVEMVEVIYDKITRRSRGFGFVTMSTVEEVE 495
           FS DLKLFVGNLPF+VDSA LA LF +AGNVEMVEVIYDK+T RSRGFGFVTM+T+EEVE
Sbjct: 86  FSQDLKLFVGNLPFNVDSARLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMTTIEEVE 145

Query: 496 AAAQQFNGYELEGRSLRVNAGPPPKKDEFAPRGGKGGSSFENPNRIYVGNLSWKVDDAAL 675
           AA++QFNGYEL+GR+LRVN GPPP+K+    RG +GG +F++ NR+YVGNLSW VD+ AL
Sbjct: 146 AASKQFNGYELDGRTLRVNFGPPPQKESSFSRGPRGGETFDSGNRVYVGNLSWNVDNLAL 205

Query: 676 KTLFSELGDVLEAKVIYDRDSGRSRGFGFVTYSSSDEVNNAIESLDGVDLNGRSIRVTAA 855
           +TLF E G V++AKV+YDRDSGRSRGFGFVTYSS++EV+NAI+SL+G +L+GR+IRV+ A
Sbjct: 206 ETLFREKGRVMDAKVVYDRDSGRSRGFGFVTYSSAEEVDNAIDSLNGAELDGRAIRVSVA 265

Query: 856 ESRPKRRY 879
           E++P+R++
Sbjct: 266 EAKPRRQF 273


>ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
           vinifera]
          Length = 288

 Score =  315 bits (806), Expect = 4e-83
 Identities = 174/266 (65%), Positives = 202/266 (75%), Gaps = 19/266 (7%)
 Frame = +1

Query: 139 LSFFS---SHPSITSPLNSLSFLSFKRS-QSLSSRFIQNVAVSPKFGQEADVLLSEDDLE 306
           +SFFS   S  S+    NS+S     R   +LSSRF++NVAVS  + Q+ DVL  E +  
Sbjct: 26  VSFFSLPFSCSSLKLHSNSISLSPSSRGFLTLSSRFVRNVAVSSDYEQDEDVLSDEGE-- 83

Query: 307 QPEFSPDLKLFVGNLPFSVDSAELASLFGSAGNVEMVEVIYDKITRRSRGFGFVTMSTVE 486
            P FSPDLKLFVGNLPF+VDSA LA LF  AGNVEMVEVIYDKIT RSRGFGFVTMSTVE
Sbjct: 84  -PSFSPDLKLFVGNLPFNVDSAGLAGLFEQAGNVEMVEVIYDKITGRSRGFGFVTMSTVE 142

Query: 487 EVEAAAQQFNGYELEGRSLRVNAGPPPKKDEFAP---------------RGGKGGSSFEN 621
           EVEAAAQQFNGYELEGR LRVN+GPPP + E +                RG +GG++  +
Sbjct: 143 EVEAAAQQFNGYELEGRQLRVNSGPPPARRENSNFRGENSNFRGENTNFRGPRGGANLNS 202

Query: 622 PNRIYVGNLSWKVDDAALKTLFSELGDVLEAKVIYDRDSGRSRGFGFVTYSSSDEVNNAI 801
            NRIYVGNLSW VDD AL+TLFSE G V EA+VIYDR++GRSRGFGFVTY+S++EVN AI
Sbjct: 203 TNRIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEEVNRAI 262

Query: 802 ESLDGVDLNGRSIRVTAAESRPKRRY 879
           ESLDGVDLNGRSIRVT AE+RP+R++
Sbjct: 263 ESLDGVDLNGRSIRVTMAEARPRRQF 288


>ref|XP_002326357.1| predicted protein [Populus trichocarpa]
           gi|566176031|ref|XP_006381446.1| 29 kDa
           ribonucleoprotein [Populus trichocarpa]
           gi|550336149|gb|ERP59243.1| 29 kDa ribonucleoprotein
           [Populus trichocarpa]
          Length = 286

 Score =  310 bits (795), Expect = 8e-82
 Identities = 165/276 (59%), Positives = 214/276 (77%), Gaps = 15/276 (5%)
 Frame = +1

Query: 97  TFTSNPTTKPQIPYLSFFSSHPSITSPLNSLS-FLSF--KRSQSLSSRFIQNVAVSPKFG 267
           +F S PT+      LSF S   S TS +   S FLSF  K+ Q LSSRF+++VA+S +FG
Sbjct: 22  SFYSKPTS------LSFLSL--SSTSSIKPASLFLSFQQKQQQPLSSRFLKSVAISSEFG 73

Query: 268 QEADVLLSEDDLEQPEFSPDLKLFVGNLPFSVDSAELASLFGSAGNVEMVEVIYDKITRR 447
           QE DV     D ++P FSPDL+LFVGNLPF+V+SA+LA LF SAGNVEMVEV YDK+T R
Sbjct: 74  QEEDVF---GDGDEPSFSPDLQLFVGNLPFNVNSAQLADLFKSAGNVEMVEVKYDKVTGR 130

Query: 448 SRGFGFVTMSTVEEVEAAAQQFNGYELEGRSLRVNAGPPPKKDEFAPR------------ 591
           SRGFGFVTMST+EEVEAA+QQFNGYEL+GR LRVN+GPPP+++    R            
Sbjct: 131 SRGFGFVTMSTIEEVEAASQQFNGYELDGRPLRVNSGPPPQRETSFSRLPQRENSFSRGP 190

Query: 592 GGKGGSSFENPNRIYVGNLSWKVDDAALKTLFSELGDVLEAKVIYDRDSGRSRGFGFVTY 771
           G +GG +F++ NR+YVGNLSW VDD+AL++LF E G V++AKV+YDRDSGRS+GFGFVTY
Sbjct: 191 GARGGETFDSSNRVYVGNLSWNVDDSALESLFREKGKVMDAKVVYDRDSGRSKGFGFVTY 250

Query: 772 SSSDEVNNAIESLDGVDLNGRSIRVTAAESRPKRRY 879
           SS++EV +A++SL+G +L+GR+IRV+ AE++P+RR+
Sbjct: 251 SSAEEVEDAVDSLNGAELDGRAIRVSVAEAKPRRRF 286


>sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
           Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1|
           29kD A ribonucleoprotein [Nicotiana sylvestris]
          Length = 273

 Score =  308 bits (788), Expect = 5e-81
 Identities = 171/260 (65%), Positives = 200/260 (76%), Gaps = 5/260 (1%)
 Frame = +1

Query: 112 PTTKP--QIPYLSFFSSHPSITSPLNSLSFLSFKRSQSLSSRFIQNVAVSPKFGQEADVL 285
           P  KP  Q   LSFFS  PS      SL+      S   SSRF++ V +S  F Q  DV 
Sbjct: 19  PLPKPTSQTTSLSFFSLPPS------SLNLSLSSSSSCFSSRFVRKVTLSD-FDQIEDVE 71

Query: 286 LSEDDLEQPE-FSPDLKLFVGNLPFSVDSAELASLFGSAGNVEMVEVIYDKITRRSRGFG 462
             +D +E+   FSPDLK+FVGNLPFS DSA LA LF  AGNVEMVEVIYDK+T RSRGFG
Sbjct: 72  DGDDGVEEERNFSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFG 131

Query: 463 FVTMSTVEEVEAAAQQFNGYELEGRSLRVNAGPPPKKDEFAP-RGG-KGGSSFENPNRIY 636
           FVTMS+ EEVEAA QQFNGYEL+GR+LRVN+GPPP+K E +  RGG +GG SF++ NR+Y
Sbjct: 132 FVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGSFDSSNRVY 191

Query: 637 VGNLSWKVDDAALKTLFSELGDVLEAKVIYDRDSGRSRGFGFVTYSSSDEVNNAIESLDG 816
           VGNL+W VD  AL+TLFSE G V++AKV+YDRDSGRSRGFGFVTYSS++EVNNAIESLDG
Sbjct: 192 VGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDG 251

Query: 817 VDLNGRSIRVTAAESRPKRR 876
           VDLNGR+IRV+ AE+RP RR
Sbjct: 252 VDLNGRAIRVSPAEARPPRR 271



 Score = 81.3 bits (199), Expect = 1e-12
 Identities = 43/95 (45%), Positives = 59/95 (62%)
 Frame = +1

Query: 610 SFENPNRIYVGNLSWKVDDAALKTLFSELGDVLEAKVIYDRDSGRSRGFGFVTYSSSDEV 789
           +F    +I+VGNL +  D AAL  LF   G+V   +VIYD+ +GRSRGFGFVT SS +EV
Sbjct: 82  NFSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEV 141

Query: 790 NNAIESLDGVDLNGRSIRVTAAESRPKRRY*SENG 894
             A +  +G +L+GR++RV +     KR   S  G
Sbjct: 142 EAACQQFNGYELDGRALRVNSGPPPEKRENSSFRG 176


>gb|EXC16209.1| 29 kDa ribonucleoprotein B [Morus notabilis]
          Length = 296

 Score =  307 bits (786), Expect = 8e-81
 Identities = 161/234 (68%), Positives = 188/234 (80%), Gaps = 11/234 (4%)
 Frame = +1

Query: 211 SQSLSSRFIQNVAVSPKFGQEADVLLSEDDLEQPEFSPDLKLFVGNLPFSVDSAELASLF 390
           S S   RF+  VAVS +F Q+ DVL   D  E+P FSPDLKLFVGNLPFSVDSA+LA LF
Sbjct: 65  SSSSPCRFVPKVAVSSEFDQDEDVL--SDGGEEPGFSPDLKLFVGNLPFSVDSAQLAGLF 122

Query: 391 GSAGNVEMVEVIYDKITRRSRGFGFVTMSTVEEVEAAAQQFNGYELEGRSLRVNAGPPP- 567
              GNVEMVEVIYDK T RSRGFGFVTMS+++EVEAAAQQFNGYELEGR LRVN GPPP 
Sbjct: 123 ERTGNVEMVEVIYDKTTGRSRGFGFVTMSSIDEVEAAAQQFNGYELEGRPLRVNYGPPPS 182

Query: 568 KKDEFAPR----------GGKGGSSFENPNRIYVGNLSWKVDDAALKTLFSELGDVLEAK 717
           ++D+  PR          GG GG+ +E  NR+YVGNLSW VD+AAL++LFSE G VLEAK
Sbjct: 183 REDDSFPRGRRGGGGGGGGGGGGAGYETGNRVYVGNLSWGVDNAALESLFSEQGKVLEAK 242

Query: 718 VIYDRDSGRSRGFGFVTYSSSDEVNNAIESLDGVDLNGRSIRVTAAESRPKRRY 879
           V+YDRDSGRSRGFGFVTY+++DEVN+AI SL+GVDLNGRSIRVT AE++P+R +
Sbjct: 243 VVYDRDSGRSRGFGFVTYNTADEVNSAINSLNGVDLNGRSIRVTHAEAKPRRSF 296


>ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus] gi|449483348|ref|XP_004156563.1| PREDICTED: 29
           kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 278

 Score =  304 bits (778), Expect = 7e-80
 Identities = 163/256 (63%), Positives = 197/256 (76%), Gaps = 8/256 (3%)
 Frame = +1

Query: 133 PYLSFFSSHPS-----ITSPLNSLSFL--SFKRSQSLSSRFIQNVAVSPKFGQEADVLLS 291
           P    FS +PS     +++P++  SFL  S + S   SSRF++NVAVS  +GQE   L  
Sbjct: 23  PKFKLFSLNPSSSIRLLSNPISISSFLLPSHRVSPPFSSRFVRNVAVSSDYGQEEGTL-- 80

Query: 292 EDDLEQPEFSPDLKLFVGNLPFSVDSAELASLFGSAGNVEMVEVIYDKITRRSRGFGFVT 471
           E D +   ++PDLKLFVGNLPF+VDSA+LA LF SAG VE VEVIYDK T RSRGFGFVT
Sbjct: 81  EVDGDDSSYAPDLKLFVGNLPFTVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVT 140

Query: 472 MSTVEEVEAAAQQFNGYELEGRSLRVNAGPPP-KKDEFAPRGGKGGSSFENPNRIYVGNL 648
           MSTV EVEAAAQQFNGYEL+GR LRVN GPPP K+D+ + RG +  S F+N NR++V NL
Sbjct: 141 MSTVGEVEAAAQQFNGYELDGRLLRVNYGPPPPKRDDSSFRGSRNASRFDNRNRVHVSNL 200

Query: 649 SWKVDDAALKTLFSELGDVLEAKVIYDRDSGRSRGFGFVTYSSSDEVNNAIESLDGVDLN 828
           +W VDD  L+ LF E G+VLEAKV+YDRDSG+SRGFGFVTY+S++EVN AI+SLDGVDL+
Sbjct: 201 AWGVDDLTLENLFREKGNVLEAKVVYDRDSGKSRGFGFVTYNSAEEVNEAIQSLDGVDLD 260

Query: 829 GRSIRVTAAESRPKRR 876
           GR IRVT AE+RP RR
Sbjct: 261 GRPIRVTQAEARPPRR 276


>gb|AAA79045.1| 24 kDa RNA binding protein, partial [Spinacia oleracea]
          Length = 220

 Score =  302 bits (774), Expect = 2e-79
 Identities = 157/219 (71%), Positives = 182/219 (83%)
 Frame = +1

Query: 217 SLSSRFIQNVAVSPKFGQEADVLLSEDDLEQPEFSPDLKLFVGNLPFSVDSAELASLFGS 396
           S+SS F+++V +S +F QE DV+  +D   QP FSPDLK+FVGNLPF+VDSAELA LFG+
Sbjct: 1   SISSSFVRHVRISSEFEQEEDVMGDDDAGRQPNFSPDLKIFVGNLPFNVDSAELAGLFGA 60

Query: 397 AGNVEMVEVIYDKITRRSRGFGFVTMSTVEEVEAAAQQFNGYELEGRSLRVNAGPPPKKD 576
           AG VEMVEVIYDK+T RSRGFGFVTMS+VEEVEAAAQQFN YEL+GR+LRV       KD
Sbjct: 61  AGTVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAAAQQFNNYELDGRTLRVT--EDSHKD 118

Query: 577 EFAPRGGKGGSSFENPNRIYVGNLSWKVDDAALKTLFSELGDVLEAKVIYDRDSGRSRGF 756
              PR      SF + NR++VGNLSWKVDD ALKTLFSE GDV+EAKVIYDRD+GRSRGF
Sbjct: 119 MTLPRVESECDSFGSSNRVHVGNLSWKVDDDALKTLFSETGDVVEAKVIYDRDTGRSRGF 178

Query: 757 GFVTYSSSDEVNNAIESLDGVDLNGRSIRVTAAESRPKR 873
           GFVTY+S++EVN AIESLDGVDLNGRSIRVTAAE+R +R
Sbjct: 179 GFVTYNSANEVNTAIESLDGVDLNGRSIRVTAAEARQRR 217


>ref|XP_003535181.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Glycine max]
          Length = 275

 Score =  301 bits (772), Expect = 4e-79
 Identities = 165/267 (61%), Positives = 201/267 (75%), Gaps = 10/267 (3%)
 Frame = +1

Query: 103 TSNPTTKPQIPYLSFFSSHPSITSPLN---SLSFLSFKRSQSLSSRFIQNVAVSPKFGQE 273
           T  P   PQ      FSS  S+T P N   S+S +  K +   SSRF+ +V VS   GQE
Sbjct: 17  TRQPLCSPQC-----FSSSLSLT-PNNKPISISAVFLKPTTLSSSRFVPHVVVSSDLGQE 70

Query: 274 ADVLLSEDDLEQPEFSPDLKLFVGNLPFSVDSAELASLFGSAGNVEMVEVIYDKITRRSR 453
            D      D + P FSPDLKLFVGNLPF+VDSA+LA LF SAGNVE+VEVIYDK T RSR
Sbjct: 71  EDTF---SDGDGPSFSPDLKLFVGNLPFNVDSAQLAELFESAGNVEVVEVIYDKTTGRSR 127

Query: 454 GFGFVTMSTVEEVEAAAQQFNGYELEGRSLRVNAGPPPKKDEFAPR-------GGKGGSS 612
           GFGFVTMS+VEE EAAAQQFNGYEL+GR+LRVN+GPPP ++E APR       G +GG  
Sbjct: 128 GFGFVTMSSVEEAEAAAQQFNGYELDGRALRVNSGPPPARNESAPRFRGGSSFGSRGGGP 187

Query: 613 FENPNRIYVGNLSWKVDDAALKTLFSELGDVLEAKVIYDRDSGRSRGFGFVTYSSSDEVN 792
            ++ NR++V NL+W VD+ ALK+LF E G+VLEA+VIYDR+SGRSRGFGFVT+SS DEVN
Sbjct: 188 SDSENRVHVSNLAWGVDNVALKSLFREQGNVLEARVIYDRESGRSRGFGFVTFSSPDEVN 247

Query: 793 NAIESLDGVDLNGRSIRVTAAESRPKR 873
           +AI+SL+GVDLNGR+IRV+ A+S+PK+
Sbjct: 248 SAIQSLNGVDLNGRAIRVSLADSKPKQ 274


>sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
           Full=CP-RBP30; Flags: Precursor gi|19708|emb|CAA46234.1|
           RNA binding protein 30 [Nicotiana plumbaginifolia]
          Length = 279

 Score =  300 bits (769), Expect = 8e-79
 Identities = 167/264 (63%), Positives = 197/264 (74%), Gaps = 9/264 (3%)
 Frame = +1

Query: 112 PTTKPQIPYLSFFSSHPSITSPLNSLSFLSFKRSQSLSSRFIQNVAVSPKFGQEADVLLS 291
           P    Q   LSFFS  PS      SL+      S   SSRF++ V + P F Q  DV   
Sbjct: 21  PKPTSQTTSLSFFSLPPS------SLNLSLSSPSSCFSSRFVRKVTL-PDFDQIEDVEDG 73

Query: 292 EDDLEQPE-FSPDLKLFVGNLPFSVDSAELASLFGSAGNVEMVEVIYDKITRRSRGFGFV 468
           ++ +E+   FSPDLK+FVGNL FS DSA LA LF  AGNVEMVEVIYDK+T RSRGFGFV
Sbjct: 74  DEGVEEERNFSPDLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFV 133

Query: 469 TMSTVEEVEAAAQQFNGYELEGRSLRVNAGPPPKKDEFAP-------RGG-KGGSSFENP 624
           TMS+ EEVEAA QQFNGYEL+GR+LRVN+GPPP+K E +        RGG +GG SF++ 
Sbjct: 134 TMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRGGGSFDSS 193

Query: 625 NRIYVGNLSWKVDDAALKTLFSELGDVLEAKVIYDRDSGRSRGFGFVTYSSSDEVNNAIE 804
           NR+YVGNL+W VD  AL+TLFSE G V++AKV+YDRDSGRSRGFGFVTYSS++EVNNAIE
Sbjct: 194 NRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIE 253

Query: 805 SLDGVDLNGRSIRVTAAESRPKRR 876
           SLDGVDLNGR+IRV+ AE+RP RR
Sbjct: 254 SLDGVDLNGRAIRVSPAEARPPRR 277


>ref|XP_006428768.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
           gi|557530825|gb|ESR42008.1| hypothetical protein
           CICLE_v10012331mg [Citrus clementina]
          Length = 271

 Score =  300 bits (767), Expect = 1e-78
 Identities = 168/265 (63%), Positives = 200/265 (75%), Gaps = 6/265 (2%)
 Frame = +1

Query: 100 FTSNPTTKPQIPYLSFFSSHPSITSPLN-SLSFL-SFKRSQSLSSRFIQNVAVSPKFGQE 273
           + S PT+      LS  SSH  +  P++ S SF+ SF+   S  SRF++NVAVS +F QE
Sbjct: 22  YNSKPTS---FSLLSSSSSHKLLAKPISISSSFIHSFQPLPSSPSRFVRNVAVSSEFDQE 78

Query: 274 ADVLLSEDDLEQPEFSPDLKLFVGNLPFSVDSAELASLFGSAGNVEMVEVIYDKITRRSR 453
            D+L  ED      FSPDLKLFVGNLPFSVDSA+LA LF +AGNVEMVEVIYDK+T RSR
Sbjct: 79  EDLLSDEDG---SNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSR 135

Query: 454 GFGFVTMSTVEEVEAAAQQFNGYELEGRSLRVNAG-PPPKKDEFAPRGGKGGSS---FEN 621
           GFGFVTMS+VEEVEAAAQQFNGYELEGR LRVN+G PPP+++EF+PRG +GG +      
Sbjct: 136 GFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAGAPSSG 195

Query: 622 PNRIYVGNLSWKVDDAALKTLFSELGDVLEAKVIYDRDSGRSRGFGFVTYSSSDEVNNAI 801
            NR+YVGNLSW VDD AL+TLF E G VLEAKV+YDR+SGRSRGFGFVTYSS++E     
Sbjct: 196 GNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEE----- 250

Query: 802 ESLDGVDLNGRSIRVTAAESRPKRR 876
                 DL GR+IRV+ AE+RP+RR
Sbjct: 251 ------DLAGRAIRVSVAEARPQRR 269



 Score = 84.3 bits (207), Expect = 1e-13
 Identities = 44/97 (45%), Positives = 60/97 (61%)
 Frame = +1

Query: 604 GSSFENPNRIYVGNLSWKVDDAALKTLFSELGDVLEAKVIYDRDSGRSRGFGFVTYSSSD 783
           GS+F    +++VGNL + VD A L  LF   G+V   +VIYD+ +GRSRGFGFVT SS +
Sbjct: 87  GSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVE 146

Query: 784 EVNNAIESLDGVDLNGRSIRVTAAESRPKRRY*SENG 894
           EV  A +  +G +L GR +RV +    P+R   S  G
Sbjct: 147 EVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRG 183


>ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223541388|gb|EEF42939.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 280

 Score =  300 bits (767), Expect = 1e-78
 Identities = 164/271 (60%), Positives = 204/271 (75%), Gaps = 14/271 (5%)
 Frame = +1

Query: 109 NPTT----KPQIPYLSFFSSHPSITSPLNSLSFLSF----KRSQSLSSRFIQNVAVSPKF 264
           NP T     P  P    F  H    S  +SL F SF    ++  S SSRF+ +VA+S +F
Sbjct: 15  NPKTLSLCNPNKPISLSFKLHAKPISIPSSL-FSSFVPLQQQPYSSSSRFVPSVAISSEF 73

Query: 265 GQEADVLLSEDDLEQPEFSPDLKLFVGNLPFSVDSAELASLFGSAGNVEMVEVIYDKITR 444
           GQE DV     D ++  FS DLKLFVGNLPF+VDSA+LA LF SAGNVEMVEVIYDK+T 
Sbjct: 74  GQEEDV---SSDGDESSFSQDLKLFVGNLPFNVDSAQLAGLFESAGNVEMVEVIYDKVTG 130

Query: 445 RSRGFGFVTMSTVEEVEAAAQQFNGYELEGRSLRVNAGPPPKKDEFAPR------GGKGG 606
           RSRGFGFVTMS+++EVEAAAQQFNGYELEGR+LRVN+GPPP+++    R      GG GG
Sbjct: 131 RSRGFGFVTMSSIDEVEAAAQQFNGYELEGRALRVNSGPPPQRESSFSRSPRFGGGGGGG 190

Query: 607 SSFENPNRIYVGNLSWKVDDAALKTLFSELGDVLEAKVIYDRDSGRSRGFGFVTYSSSDE 786
            S E  NR+YVGNLSW VD+ AL++ FSE G V++AKV+YDR+SGRSRGFGFVTYSS++E
Sbjct: 191 ESLEG-NRLYVGNLSWSVDNLALESFFSEQGKVVDAKVVYDRESGRSRGFGFVTYSSAEE 249

Query: 787 VNNAIESLDGVDLNGRSIRVTAAESRPKRRY 879
           V NAI+SL+G +L+GR+IRV+ AE+RP+R++
Sbjct: 250 VENAIDSLNGAELDGRAIRVSVAEARPRRQF 280


>ref|XP_006428770.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
           gi|557530827|gb|ESR42010.1| hypothetical protein
           CICLE_v10012331mg [Citrus clementina]
          Length = 266

 Score =  299 bits (765), Expect = 2e-78
 Identities = 165/251 (65%), Positives = 196/251 (78%), Gaps = 6/251 (2%)
 Frame = +1

Query: 100 FTSNPTTKPQIPYLSFFSSHPSITSPLN-SLSFL-SFKRSQSLSSRFIQNVAVSPKFGQE 273
           + S PT+      LS  SSH  +  P++ S SF+ SF+   S  SRF++NVAVS +F QE
Sbjct: 22  YNSKPTS---FSLLSSSSSHKLLAKPISISSSFIHSFQPLPSSPSRFVRNVAVSSEFDQE 78

Query: 274 ADVLLSEDDLEQPEFSPDLKLFVGNLPFSVDSAELASLFGSAGNVEMVEVIYDKITRRSR 453
            D+L  ED      FSPDLKLFVGNLPFSVDSA+LA LF +AGNVEMVEVIYDK+T RSR
Sbjct: 79  EDLLSDEDG---SNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSR 135

Query: 454 GFGFVTMSTVEEVEAAAQQFNGYELEGRSLRVNAG-PPPKKDEFAPRGGKGGSS---FEN 621
           GFGFVTMS+VEEVEAAAQQFNGYELEGR LRVN+G PPP+++EF+PRG +GG +      
Sbjct: 136 GFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAGAPSSG 195

Query: 622 PNRIYVGNLSWKVDDAALKTLFSELGDVLEAKVIYDRDSGRSRGFGFVTYSSSDEVNNAI 801
            NR+YVGNLSW VDD AL+TLF E G VLEAKV+YDR+SGRSRGFGFVTYSS++EV+NAI
Sbjct: 196 GNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAI 255

Query: 802 ESLDGVDLNGR 834
           +SL+GV   GR
Sbjct: 256 DSLNGVVRFGR 266



 Score = 84.3 bits (207), Expect = 1e-13
 Identities = 44/97 (45%), Positives = 60/97 (61%)
 Frame = +1

Query: 604 GSSFENPNRIYVGNLSWKVDDAALKTLFSELGDVLEAKVIYDRDSGRSRGFGFVTYSSSD 783
           GS+F    +++VGNL + VD A L  LF   G+V   +VIYD+ +GRSRGFGFVT SS +
Sbjct: 87  GSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVE 146

Query: 784 EVNNAIESLDGVDLNGRSIRVTAAESRPKRRY*SENG 894
           EV  A +  +G +L GR +RV +    P+R   S  G
Sbjct: 147 EVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRG 183


>ref|XP_004497514.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like isoform X1
           [Cicer arietinum]
          Length = 284

 Score =  298 bits (763), Expect = 4e-78
 Identities = 167/279 (59%), Positives = 204/279 (73%), Gaps = 20/279 (7%)
 Frame = +1

Query: 103 TSNPTTKPQIPYLSFFSSHPSITSPLN----SLSFLSFKRSQSLSSRFIQNVAVSPKFGQ 270
           T  P   PQ      FSSHPS +   N    S+S  S + + SLS RF+  VAVS +F Q
Sbjct: 15  TKQPLCSPQC-----FSSHPSFSINPNFKPFSISSASVRPTLSLSYRFVSRVAVSSEFDQ 69

Query: 271 EADVLLSEDDLEQPEFSPDLKLFVGNLPFSVDSAELASLFGSAGNVEMVEVIYDKITRRS 450
           + D     DD E P +S +L+LFVGNLPFSVDSA+LA +F +AGNVEMVEVIYDK T RS
Sbjct: 70  QEDTF---DDGETPNYSSNLRLFVGNLPFSVDSAQLAEIFENAGNVEMVEVIYDKTTGRS 126

Query: 451 RGFGFVTMSTVEEVEAAAQQFNGYELEGRSLRVNAGPPPKK--------------DEFAP 588
           RGFGFVTMS+ EEVEAAAQQFNGYE++GR+LRVNAGPPP                D    
Sbjct: 127 RGFGFVTMSSAEEVEAAAQQFNGYEVDGRALRVNAGPPPPPRSENSRFGENTRFGDNSRF 186

Query: 589 RGG--KGGSSFENPNRIYVGNLSWKVDDAALKTLFSELGDVLEAKVIYDRDSGRSRGFGF 762
           RGG  +GGSS ++ NR++VGNL+W VD++AL++LF   G VLEAKVIYDR+SGRSRGFGF
Sbjct: 187 RGGSPRGGSS-DSDNRVHVGNLAWGVDNSALESLFGGHGTVLEAKVIYDRESGRSRGFGF 245

Query: 763 VTYSSSDEVNNAIESLDGVDLNGRSIRVTAAESRPKRRY 879
           VT+SS DEVN+AI+SLDGVDLNGR+IRV+ A++RPKR++
Sbjct: 246 VTFSSPDEVNSAIQSLDGVDLNGRAIRVSTADTRPKRQF 284


>ref|XP_006428767.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
           gi|557530824|gb|ESR42007.1| hypothetical protein
           CICLE_v10012331mg [Citrus clementina]
          Length = 297

 Score =  298 bits (762), Expect = 5e-78
 Identities = 163/246 (66%), Positives = 194/246 (78%), Gaps = 6/246 (2%)
 Frame = +1

Query: 100 FTSNPTTKPQIPYLSFFSSHPSITSPLN-SLSFL-SFKRSQSLSSRFIQNVAVSPKFGQE 273
           + S PT+      LS  SSH  +  P++ S SF+ SF+   S  SRF++NVAVS +F QE
Sbjct: 22  YNSKPTS---FSLLSSSSSHKLLAKPISISSSFIHSFQPLPSSPSRFVRNVAVSSEFDQE 78

Query: 274 ADVLLSEDDLEQPEFSPDLKLFVGNLPFSVDSAELASLFGSAGNVEMVEVIYDKITRRSR 453
            D+L  ED      FSPDLKLFVGNLPFSVDSA+LA LF +AGNVEMVEVIYDK+T RSR
Sbjct: 79  EDLLSDEDG---SNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSR 135

Query: 454 GFGFVTMSTVEEVEAAAQQFNGYELEGRSLRVNAG-PPPKKDEFAPRGGKGGSS---FEN 621
           GFGFVTMS+VEEVEAAAQQFNGYELEGR LRVN+G PPP+++EF+PRG +GG +      
Sbjct: 136 GFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAGAPSSG 195

Query: 622 PNRIYVGNLSWKVDDAALKTLFSELGDVLEAKVIYDRDSGRSRGFGFVTYSSSDEVNNAI 801
            NR+YVGNLSW VDD AL+TLF E G VLEAKV+YDR+SGRSRGFGFVTYSS++EV+NAI
Sbjct: 196 GNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAI 255

Query: 802 ESLDGV 819
           +SL+GV
Sbjct: 256 DSLNGV 261



 Score = 84.3 bits (207), Expect = 1e-13
 Identities = 44/97 (45%), Positives = 60/97 (61%)
 Frame = +1

Query: 604 GSSFENPNRIYVGNLSWKVDDAALKTLFSELGDVLEAKVIYDRDSGRSRGFGFVTYSSSD 783
           GS+F    +++VGNL + VD A L  LF   G+V   +VIYD+ +GRSRGFGFVT SS +
Sbjct: 87  GSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVE 146

Query: 784 EVNNAIESLDGVDLNGRSIRVTAAESRPKRRY*SENG 894
           EV  A +  +G +L GR +RV +    P+R   S  G
Sbjct: 147 EVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRG 183


>ref|XP_006428769.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
           gi|557530826|gb|ESR42009.1| hypothetical protein
           CICLE_v10012331mg [Citrus clementina]
          Length = 263

 Score =  296 bits (758), Expect = 1e-77
 Identities = 162/245 (66%), Positives = 193/245 (78%), Gaps = 6/245 (2%)
 Frame = +1

Query: 100 FTSNPTTKPQIPYLSFFSSHPSITSPLN-SLSFL-SFKRSQSLSSRFIQNVAVSPKFGQE 273
           + S PT+      LS  SSH  +  P++ S SF+ SF+   S  SRF++NVAVS +F QE
Sbjct: 22  YNSKPTS---FSLLSSSSSHKLLAKPISISSSFIHSFQPLPSSPSRFVRNVAVSSEFDQE 78

Query: 274 ADVLLSEDDLEQPEFSPDLKLFVGNLPFSVDSAELASLFGSAGNVEMVEVIYDKITRRSR 453
            D+L  ED      FSPDLKLFVGNLPFSVDSA+LA LF +AGNVEMVEVIYDK+T RSR
Sbjct: 79  EDLLSDEDG---SNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSR 135

Query: 454 GFGFVTMSTVEEVEAAAQQFNGYELEGRSLRVNAG-PPPKKDEFAPRGGKGGSS---FEN 621
           GFGFVTMS+VEEVEAAAQQFNGYELEGR LRVN+G PPP+++EF+PRG +GG +      
Sbjct: 136 GFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAGAPSSG 195

Query: 622 PNRIYVGNLSWKVDDAALKTLFSELGDVLEAKVIYDRDSGRSRGFGFVTYSSSDEVNNAI 801
            NR+YVGNLSW VDD AL+TLF E G VLEAKV+YDR+SGRSRGFGFVTYSS++EV+NAI
Sbjct: 196 GNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAI 255

Query: 802 ESLDG 816
           +SL+G
Sbjct: 256 DSLNG 260



 Score = 84.3 bits (207), Expect = 1e-13
 Identities = 44/97 (45%), Positives = 60/97 (61%)
 Frame = +1

Query: 604 GSSFENPNRIYVGNLSWKVDDAALKTLFSELGDVLEAKVIYDRDSGRSRGFGFVTYSSSD 783
           GS+F    +++VGNL + VD A L  LF   G+V   +VIYD+ +GRSRGFGFVT SS +
Sbjct: 87  GSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVE 146

Query: 784 EVNNAIESLDGVDLNGRSIRVTAAESRPKRRY*SENG 894
           EV  A +  +G +L GR +RV +    P+R   S  G
Sbjct: 147 EVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRG 183



 Score = 63.2 bits (152), Expect = 3e-07
 Identities = 30/64 (46%), Positives = 42/64 (65%)
 Frame = +1

Query: 331 KLFVGNLPFSVDSAELASLFGSAGNVEMVEVIYDKITRRSRGFGFVTMSTVEEVEAAAQQ 510
           +++VGNL + VD   L +LF   G V   +V+YD+ + RSRGFGFVT S+ EEV+ A   
Sbjct: 198 RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDS 257

Query: 511 FNGY 522
            NG+
Sbjct: 258 LNGF 261


>gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]
          Length = 289

 Score =  296 bits (758), Expect = 1e-77
 Identities = 163/255 (63%), Positives = 190/255 (74%), Gaps = 16/255 (6%)
 Frame = +1

Query: 160 PSITSPLNS--LSFLSFKRSQSLSSRFIQNVAVSPKFGQEADVLLSEDDLEQPEFSPDLK 333
           PS++  LNS  +SF    +  S +SRF++NVA++ +F  E D        ++  FS DLK
Sbjct: 33  PSLSFKLNSDSVSFSIAAKWNSPASRFVRNVAITSEFEVEEDGFADVAPPKEQSFSADLK 92

Query: 334 LFVGNLPFSVDSAELASLFGSAGNVEMVEVIYDKITRRSRGFGFVTMSTVEEVEAAAQQF 513
           LFVGNLPF+VDSA+LA LF SAGNVEMVEVIYDKIT RSRGFGFVTMS+V EVEAAAQQF
Sbjct: 93  LFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQF 152

Query: 514 NGYELEGRSLRVNAGPPPKKDE----FAPR----------GGKGGSSFENPNRIYVGNLS 651
           NGYEL+GR LRVNAGPPP K E      PR          GG GGS   + NR+YVGNLS
Sbjct: 153 NGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLS 212

Query: 652 WKVDDAALKTLFSELGDVLEAKVIYDRDSGRSRGFGFVTYSSSDEVNNAIESLDGVDLNG 831
           W VDD AL++LFSE G V+EA+VIYDRDSGRS+GFGFVTY SS EV NAI+SLDG DL+G
Sbjct: 213 WGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDG 272

Query: 832 RSIRVTAAESRPKRR 876
           R IRV+ AE+RP RR
Sbjct: 273 RQIRVSEAEARPPRR 287


>ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis thaliana]
           gi|12230623|sp|Q9ZUU4.1|ROC1_ARATH RecName:
           Full=Ribonucleoprotein At2g37220, chloroplastic; Flags:
           Precursor gi|13877809|gb|AAK43982.1|AF370167_1 putative
           RNA-binding protein [Arabidopsis thaliana]
           gi|4056477|gb|AAC98043.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|15081717|gb|AAK82513.1|
           At2g37220/F3G5.1 [Arabidopsis thaliana]
           gi|16323482|gb|AAL15235.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|20197716|gb|AAM15222.1|
           putative RNA-binding protein [Arabidopsis thaliana]
           gi|330254275|gb|AEC09369.1| chloroplast RNA binding
           protein [Arabidopsis thaliana]
          Length = 289

 Score =  295 bits (754), Expect = 4e-77
 Identities = 163/255 (63%), Positives = 189/255 (74%), Gaps = 16/255 (6%)
 Frame = +1

Query: 160 PSITSPLNS--LSFLSFKRSQSLSSRFIQNVAVSPKFGQEADVLLSEDDLEQPEFSPDLK 333
           PS++  LNS  +SF    +  S +SRF +NVA++ +F  E D        ++  FS DLK
Sbjct: 33  PSLSFKLNSDSVSFSIAAKWNSPASRFARNVAITSEFEVEEDGFADVAPPKEQSFSADLK 92

Query: 334 LFVGNLPFSVDSAELASLFGSAGNVEMVEVIYDKITRRSRGFGFVTMSTVEEVEAAAQQF 513
           LFVGNLPF+VDSA+LA LF SAGNVEMVEVIYDKIT RSRGFGFVTMS+V EVEAAAQQF
Sbjct: 93  LFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQF 152

Query: 514 NGYELEGRSLRVNAGPPPKKDE----FAPR----------GGKGGSSFENPNRIYVGNLS 651
           NGYEL+GR LRVNAGPPP K E      PR          GG GGS   + NR+YVGNLS
Sbjct: 153 NGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLS 212

Query: 652 WKVDDAALKTLFSELGDVLEAKVIYDRDSGRSRGFGFVTYSSSDEVNNAIESLDGVDLNG 831
           W VDD AL++LFSE G V+EA+VIYDRDSGRS+GFGFVTY SS EV NAI+SLDG DL+G
Sbjct: 213 WGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDG 272

Query: 832 RSIRVTAAESRPKRR 876
           R IRV+ AE+RP RR
Sbjct: 273 RQIRVSEAEARPPRR 287


>ref|XP_006846809.1| hypothetical protein AMTR_s00148p00072380 [Amborella trichopoda]
           gi|548849631|gb|ERN08390.1| hypothetical protein
           AMTR_s00148p00072380 [Amborella trichopoda]
          Length = 272

 Score =  294 bits (753), Expect = 6e-77
 Identities = 158/247 (63%), Positives = 191/247 (77%), Gaps = 8/247 (3%)
 Frame = +1

Query: 163 SITSPLNSLSFLSFKRSQSLSSR---FIQNVAVSPKFGQEADVLLSEDDLEQPEFSPDLK 333
           S+ +P  SL+    + S SLS R   FI++VAV  +F QE D    E   E+  FS DLK
Sbjct: 31  SLFTPTLSLNSKG-RASLSLSKRAPLFIRSVAVFSEFQQEED----EAPSEEANFSADLK 85

Query: 334 LFVGNLPFSVDSAELASLFGSAGNVEMVEVIYDKITRRSRGFGFVTMSTVEEVEAAAQQF 513
           LFVGNLPFSVDSA LA LF  AGNVEMVEVIYDK T RSRGFGFVTMSTVEEVEAA QQF
Sbjct: 86  LFVGNLPFSVDSARLAELFEQAGNVEMVEVIYDKQTGRSRGFGFVTMSTVEEVEAAVQQF 145

Query: 514 NGYELEGRSLRVNAGPPPKKDEFAPRGGKG-----GSSFENPNRIYVGNLSWKVDDAALK 678
           NG++ EGR LRVN+GPPP +DE +PRG +G       SF++PNR+YVGNLSW VDD AL+
Sbjct: 146 NGHDFEGRQLRVNSGPPPARDEMSPRGSRGFDSPRPRSFDSPNRVYVGNLSWGVDDLALE 205

Query: 679 TLFSELGDVLEAKVIYDRDSGRSRGFGFVTYSSSDEVNNAIESLDGVDLNGRSIRVTAAE 858
            LFSE G V+EAKV+YDR+SGRSRGFGFVTYS+++EV +AI +L+G DL+GR IRVT AE
Sbjct: 206 NLFSEQGKVMEAKVVYDRESGRSRGFGFVTYSTAEEVTSAISTLNGADLDGRPIRVTPAE 265

Query: 859 SRPKRRY 879
           ++P+R++
Sbjct: 266 AKPRRQF 272