BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00000339
         (294 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315645.1| Photosystem II core complex proteins psbY [P...    47   9e-09
ref|XP_002285325.1| PREDICTED: photosystem II core complex prote...    41   2e-07
gb|ABK96551.1| unknown [Populus trichocarpa x Populus deltoides]       42   4e-07
gb|ABK96304.1| unknown [Populus trichocarpa x Populus deltoides]       42   4e-07
gb|EMJ24691.1| hypothetical protein PRUPE_ppa011725mg [Prunus pe...    42   1e-06
gb|EOY00759.1| Photosystem II core complex proteins psbY [Theobr...    43   3e-06

>ref|XP_002315645.1| Photosystem II core complex proteins psbY [Populus trichocarpa]
           gi|118489255|gb|ABK96433.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|222864685|gb|EEF01816.1|
           Photosystem II core complex proteins psbY [Populus
           trichocarpa]
          Length = 196

 Score = 47.0 bits (110), Expect(2) = 9e-09
 Identities = 21/27 (77%), Positives = 24/27 (88%)
 Frame = +2

Query: 29  MAATMATMAVLNAKCLSLNTNKTSKPT 109
           MAATMATMA+LNAKCLS+N+NK   PT
Sbjct: 1   MAATMATMAILNAKCLSINSNKNISPT 27



 Score = 38.1 bits (87), Expect(2) = 9e-09
 Identities = 21/46 (45%), Positives = 25/46 (54%)
 Frame = +3

Query: 156 PNPSPLITGPAIAGAIFATLGSVDSALXXXXXXXXXXXXNRGLALL 293
           P  + ++TG AIAGAIF TL S + A             NRGLALL
Sbjct: 51  PADNTVLTGTAIAGAIFTTLSSCEPAFAAQQIAEIAEGDNRGLALL 96


>ref|XP_002285325.1| PREDICTED: photosystem II core complex proteins psbY,
           chloroplastic-like [Vitis vinifera]
          Length = 201

 Score = 40.8 bits (94), Expect(2) = 2e-07
 Identities = 23/34 (67%), Positives = 28/34 (82%), Gaps = 3/34 (8%)
 Frame = +2

Query: 29  MAATMATMAVLNAKCLSLNTNKT---SKPTISKP 121
           MAAT+ATMA+LNAKCLS+N+ K    SKPT +KP
Sbjct: 1   MAATIATMAMLNAKCLSINSPKNLNLSKPT-AKP 33



 Score = 40.0 bits (92), Expect(2) = 2e-07
 Identities = 24/49 (48%), Positives = 26/49 (53%)
 Frame = +3

Query: 147 STGPNPSPLITGPAIAGAIFATLGSVDSALXXXXXXXXXXXXNRGLALL 293
           S   N S  + G AIAGAIF+TL S D AL            NRGLALL
Sbjct: 52  SENQNLSTSLAGTAIAGAIFSTLSSCDPALAAQQIAEIADGDNRGLALL 100


>gb|ABK96551.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 196

 Score = 42.4 bits (98), Expect(2) = 4e-07
 Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
 Frame = +2

Query: 29  MAATMATMAVLNAKCLSLNTNKTSKPTISKPNXXXXXXXIHRPK----PKPINN 178
           MAATMATMA+LNAKCLS+N+ K   P             ++ PK     KP +N
Sbjct: 1   MAATMATMAILNAKCLSINSIKNISPPKPSTKPVSLLSMLNLPKGLTISKPADN 54



 Score = 37.4 bits (85), Expect(2) = 4e-07
 Identities = 20/46 (43%), Positives = 25/46 (54%)
 Frame = +3

Query: 156 PNPSPLITGPAIAGAIFATLGSVDSALXXXXXXXXXXXXNRGLALL 293
           P  + ++TG AIAGAIF TL S + A             NRG+ALL
Sbjct: 51  PADNTVLTGTAIAGAIFTTLSSCEPAFAAQQIAEIAEGDNRGIALL 96


>gb|ABK96304.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 196

 Score = 42.4 bits (98), Expect(2) = 4e-07
 Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
 Frame = +2

Query: 29  MAATMATMAVLNAKCLSLNTNKTSKPTISKPNXXXXXXXIHRPK----PKPINN 178
           MAATMATMA+LNAKCLS+N+ K   P             ++ PK     KP +N
Sbjct: 1   MAATMATMAILNAKCLSINSIKNISPPKPSTKPVSLLSMLNLPKGLTISKPADN 54



 Score = 37.4 bits (85), Expect(2) = 4e-07
 Identities = 20/46 (43%), Positives = 25/46 (54%)
 Frame = +3

Query: 156 PNPSPLITGPAIAGAIFATLGSVDSALXXXXXXXXXXXXNRGLALL 293
           P  + ++TG AIAGAIF TL S + A             NRG+ALL
Sbjct: 51  PADNTVLTGTAIAGAIFTTLSSCEPAFAAQQIAEIAEGDNRGIALL 96


>gb|EMJ24691.1| hypothetical protein PRUPE_ppa011725mg [Prunus persica]
          Length = 199

 Score = 41.6 bits (96), Expect(2) = 1e-06
 Identities = 21/32 (65%), Positives = 25/32 (78%), Gaps = 5/32 (15%)
 Frame = +2

Query: 29  MAATMATMAVLNAKCLSLNTNK-----TSKPT 109
           MAATMATMA++NAKC+S NT K     T+KPT
Sbjct: 1   MAATMATMAIINAKCMSTNTPKVVTKLTTKPT 32



 Score = 36.2 bits (82), Expect(2) = 1e-06
 Identities = 23/45 (51%), Positives = 26/45 (57%)
 Frame = +3

Query: 159 NPSPLITGPAIAGAIFATLGSVDSALXXXXXXXXXXXXNRGLALL 293
           N SPL +  AIAGAIF+TL S D A+            NRGLALL
Sbjct: 56  NMSPLAS-TAIAGAIFSTLSSSDPAMAAQQIAQIAEGDNRGLALL 99


>gb|EOY00759.1| Photosystem II core complex proteins psbY [Theobroma cacao]
          Length = 201

 Score = 42.7 bits (99), Expect(2) = 3e-06
 Identities = 19/27 (70%), Positives = 24/27 (88%)
 Frame = +2

Query: 29  MAATMATMAVLNAKCLSLNTNKTSKPT 109
           MAA +ATMA+LNAKCLS+++NKT  PT
Sbjct: 1   MAAAVATMAMLNAKCLSISSNKTINPT 27



 Score = 33.9 bits (76), Expect(2) = 3e-06
 Identities = 18/40 (45%), Positives = 22/40 (55%)
 Frame = +3

Query: 174 ITGPAIAGAIFATLGSVDSALXXXXXXXXXXXXNRGLALL 293
           + G AIAGA+F+TL S + A             NRGLALL
Sbjct: 61  LAGTAIAGAVFSTLSSCNPAFAAQQIAEIAEGDNRGLALL 100