BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00000318
         (1861 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ...   944   0.0  
gb|EOY29336.1| DNA-directed RNA polymerase isoform 1 [Theobroma ...   939   0.0  
gb|EOY29337.1| DNA-directed RNA polymerase isoform 2 [Theobroma ...   934   0.0  
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub...   932   0.0  
gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode...   930   0.0  
ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D sub...   923   0.0  
emb|CBI21137.3| unnamed protein product [Vitis vinifera]              922   0.0  
ref|XP_002324332.2| DNA-directed RNA polymerase family protein [...   917   0.0  
gb|EMJ26641.1| hypothetical protein PRUPE_ppa000410mg [Prunus pe...   914   0.0  
ref|XP_003523670.1| PREDICTED: DNA-directed RNA polymerases IV a...   909   0.0  
ref|XP_004288915.1| PREDICTED: DNA-directed RNA polymerase D sub...   906   0.0  
ref|XP_004501385.1| PREDICTED: DNA-directed RNA polymerase D sub...   906   0.0  
ref|XP_003603295.1| DNA-directed RNA polymerase subunit beta [Me...   905   0.0  
gb|ESW08936.1| hypothetical protein PHAVU_009G087100g [Phaseolus...   900   0.0  
ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citr...   900   0.0  
ref|XP_003527775.1| PREDICTED: DNA-directed RNA polymerases IV a...   899   0.0  
ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV a...   896   0.0  
ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D sub...   895   0.0  
ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV a...   889   0.0  
gb|EXB86677.1| DNA-directed RNA polymerase D subunit 2a [Morus n...   888   0.0  

>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
            gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
            subunit, putative [Ricinus communis]
          Length = 1203

 Score =  944 bits (2439), Expect = 0.0
 Identities = 458/552 (82%), Positives = 501/552 (90%), Gaps = 5/552 (0%)
 Frame = -1

Query: 1861 RPLLVVENLKKIKILKGDNFSFETLLDKXXXXXXXXXXXEDCRIAWGIKFLFE--DKGKD 1688
            RPLLVV+NL KI+  KG N +F++LLDK           EDC  AWGIKFL    D  + 
Sbjct: 652  RPLLVVQNLHKIEAFKGGNCTFQSLLDKGIIEFVGTEEEEDCSTAWGIKFLLSGVDGKQS 711

Query: 1687 TKYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRLDTLTH 1508
             KYTHCELDMSFLLG+SCGIIPFANHDHARRVLYQ++KHS QAIG+ +TNPNIR+DTL+H
Sbjct: 712  LKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFPTTNPNIRVDTLSH 771

Query: 1507 QMYYPQRPLFRSVISDSLGEP---LGRNQVLPKAEFFNGQNGIVAVNVHLGYNQEDSLVM 1337
            Q+YYPQRPLFR+V SD LG+P    G N ++PK E +NGQN IVAVNVHLGYNQEDSLVM
Sbjct: 772  QLYYPQRPLFRTVTSDCLGKPGDTRGHNGIVPKPELYNGQNAIVAVNVHLGYNQEDSLVM 831

Query: 1336 NRASLERGMFRTEHFRSYKAEVDNNESSEKRRKFEDVVSFGKIQSKIGRVDSLDDDGFPF 1157
            NRASLERGMFR+EH RSYKA+VDN E  +KRRK++D V+FGKI SKIGRVDSLDDDGFPF
Sbjct: 832  NRASLERGMFRSEHIRSYKADVDNKELLDKRRKYDDNVNFGKIPSKIGRVDSLDDDGFPF 891

Query: 1156 IGANLHSGDIIIGRCAESGADHSVKLKHTERGMVQKVVLSANDDGKTFAVVSLRQVRSPC 977
            IGANL SGDI+IGRCAESG DHS+KLKHTERGMVQKVVLS+ND+GK FAVVSLRQVRSPC
Sbjct: 892  IGANLQSGDIVIGRCAESGPDHSIKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQVRSPC 951

Query: 976  LGDKFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGI 797
            LGDKFSSMHGQKGVLG+LESQENFPFT+QGIVPDIVINPH+FPSRQTPGQLLEAALGKGI
Sbjct: 952  LGDKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIVINPHSFPSRQTPGQLLEAALGKGI 1011

Query: 796  ACGGTLKYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQRL 617
            ACGG++KYATPFSTLSVEAIT QLHRAGFSRWGNERVYNGRTGEM+R+LIFMGPTFYQRL
Sbjct: 1012 ACGGSMKYATPFSTLSVEAITNQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRL 1071

Query: 616  IHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLS 437
            IHM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLS
Sbjct: 1072 IHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLS 1131

Query: 436  DSSQMHVCRKCKNIANVIQRAVPGGKKIRGPYCRFCESVDEIVKINVPYGAKLLCQELFS 257
            DSSQMH+C+KCKN+ANVIQRAVPGG+KIRGPYCR CESVDEIVK+NVPYGAKLLCQELFS
Sbjct: 1132 DSSQMHICQKCKNVANVIQRAVPGGRKIRGPYCRVCESVDEIVKVNVPYGAKLLCQELFS 1191

Query: 256  MGISLRFETELC 221
            MGISL+FET LC
Sbjct: 1192 MGISLKFETRLC 1203


>gb|EOY29336.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
          Length = 1184

 Score =  939 bits (2428), Expect = 0.0
 Identities = 453/552 (82%), Positives = 505/552 (91%), Gaps = 5/552 (0%)
 Frame = -1

Query: 1861 RPLLVVENLKKIKILKGDNFSFETLLDKXXXXXXXXXXXEDCRIAWGIKFLFED-KGKD- 1688
            RPLLVV+NL +IK  KG+N++F+ LL+            EDCR AW IK+L  D +GK  
Sbjct: 633  RPLLVVDNLNRIKAFKGENYTFQALLEGGIIELVGTEEEEDCRTAWSIKYLLTDVEGKQP 692

Query: 1687 TKYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRLDTLTH 1508
             KYTHCELDMSFLLG+SCGIIPFANHDHARRVLYQ++KHS QAIG+S+TNPNIR+DTL+H
Sbjct: 693  VKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSH 752

Query: 1507 QMYYPQRPLFRSVISDSLGE---PLGRNQVLPKAEFFNGQNGIVAVNVHLGYNQEDSLVM 1337
            Q+YYPQRPLFR++ SD LG+   PLG+  VLPK E +NGQN IVAVNVHLGYNQEDSLVM
Sbjct: 753  QLYYPQRPLFRTMTSDCLGKLGHPLGQKGVLPKPELYNGQNAIVAVNVHLGYNQEDSLVM 812

Query: 1336 NRASLERGMFRTEHFRSYKAEVDNNESSEKRRKFEDVVSFGKIQSKIGRVDSLDDDGFPF 1157
            NR+SLERGMFR+EH RSYKAEVDN E  +KRRK ED+V+FGKIQSKIGRVDSLDDDGFP+
Sbjct: 813  NRSSLERGMFRSEHVRSYKAEVDNKEIQDKRRKSEDIVNFGKIQSKIGRVDSLDDDGFPY 872

Query: 1156 IGANLHSGDIIIGRCAESGADHSVKLKHTERGMVQKVVLSANDDGKTFAVVSLRQVRSPC 977
            +GANL  GDI+IGRCAESGADHS+KLKHTERGMVQKVVLS+NDDGK +AVVSLRQVRSPC
Sbjct: 873  VGANLQCGDIVIGRCAESGADHSIKLKHTERGMVQKVVLSSNDDGKNYAVVSLRQVRSPC 932

Query: 976  LGDKFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGI 797
            LGDKFSSMHGQKGVLG+LESQENFPFT QGIVPDIVINPHAFPSRQTPGQLLEAALGKGI
Sbjct: 933  LGDKFSSMHGQKGVLGFLESQENFPFTTQGIVPDIVINPHAFPSRQTPGQLLEAALGKGI 992

Query: 796  ACGGTLKYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQRL 617
            ACGG++KYATPFST+SV+AITEQLHRAGFSRWGNERVYNGRTGEM+R+LIFMGPTFYQRL
Sbjct: 993  ACGGSMKYATPFSTISVDAITEQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRL 1052

Query: 616  IHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLS 437
            IHM+EDKVKFRNTGPVHPLTRQPVADRKR+GGIKFGEMERDCLIAHGASANLHERL TLS
Sbjct: 1053 IHMAEDKVKFRNTGPVHPLTRQPVADRKRYGGIKFGEMERDCLIAHGASANLHERLVTLS 1112

Query: 436  DSSQMHVCRKCKNIANVIQRAVPGGKKIRGPYCRFCESVDEIVKINVPYGAKLLCQELFS 257
            DSSQMHVCR CKN+ANVI+RAVPGG+KIRGPYCR C+SVD+IV++NVPYGAKLLCQELFS
Sbjct: 1113 DSSQMHVCRNCKNVANVIERAVPGGRKIRGPYCRGCQSVDDIVRVNVPYGAKLLCQELFS 1172

Query: 256  MGISLRFETELC 221
            MGI+L+FET+LC
Sbjct: 1173 MGINLKFETQLC 1184


>gb|EOY29337.1| DNA-directed RNA polymerase isoform 2 [Theobroma cacao]
          Length = 961

 Score =  934 bits (2413), Expect = 0.0
 Identities = 453/556 (81%), Positives = 505/556 (90%), Gaps = 9/556 (1%)
 Frame = -1

Query: 1861 RPLLVVENLKKIKILKGDNFSFETLLDKXXXXXXXXXXXEDCRIAWGIKFLFED-KGKD- 1688
            RPLLVV+NL +IK  KG+N++F+ LL+            EDCR AW IK+L  D +GK  
Sbjct: 406  RPLLVVDNLNRIKAFKGENYTFQALLEGGIIELVGTEEEEDCRTAWSIKYLLTDVEGKQP 465

Query: 1687 TKYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRLDTLTH 1508
             KYTHCELDMSFLLG+SCGIIPFANHDHARRVLYQ++KHS QAIG+S+TNPNIR+DTL+H
Sbjct: 466  VKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSH 525

Query: 1507 QMYYPQRPLFRSVISDSLGE---PLGRNQVLPKAEFFNGQNGIVAVNVHLGYNQEDSLVM 1337
            Q+YYPQRPLFR++ SD LG+   PLG+  VLPK E +NGQN IVAVNVHLGYNQEDSLVM
Sbjct: 526  QLYYPQRPLFRTMTSDCLGKLGHPLGQKGVLPKPELYNGQNAIVAVNVHLGYNQEDSLVM 585

Query: 1336 NRASLERGMFRTEHFRSYKAEVDNNESSEKRRKFEDVVSFGKIQSKIGRVDSLDDDGFPF 1157
            NR+SLERGMFR+EH RSYKAEVDN E  +KRRK ED+V+FGKIQSKIGRVDSLDDDGFP+
Sbjct: 586  NRSSLERGMFRSEHVRSYKAEVDNKEIQDKRRKSEDIVNFGKIQSKIGRVDSLDDDGFPY 645

Query: 1156 IGANLHSGDIIIGRCAESGADHSVKLKHTERGMVQKVVLSANDDGKTFAVVSLRQVRSPC 977
            +GANL  GDI+IGRCAESGADHS+KLKHTERGMVQKVVLS+NDDGK +AVVSLRQVRSPC
Sbjct: 646  VGANLQCGDIVIGRCAESGADHSIKLKHTERGMVQKVVLSSNDDGKNYAVVSLRQVRSPC 705

Query: 976  LGDKFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGI 797
            LGDKFSSMHGQKGVLG+LESQENFPFT QGIVPDIVINPHAFPSRQTPGQLLEAALGKGI
Sbjct: 706  LGDKFSSMHGQKGVLGFLESQENFPFTTQGIVPDIVINPHAFPSRQTPGQLLEAALGKGI 765

Query: 796  ACGGTLKYATPFSTLSVEAITEQL----HRAGFSRWGNERVYNGRTGEMIRTLIFMGPTF 629
            ACGG++KYATPFST+SV+AITEQL    HRAGFSRWGNERVYNGRTGEM+R+LIFMGPTF
Sbjct: 766  ACGGSMKYATPFSTISVDAITEQLHSICHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTF 825

Query: 628  YQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERL 449
            YQRLIHM+EDKVKFRNTGPVHPLTRQPVADRKR+GGIKFGEMERDCLIAHGASANLHERL
Sbjct: 826  YQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRYGGIKFGEMERDCLIAHGASANLHERL 885

Query: 448  FTLSDSSQMHVCRKCKNIANVIQRAVPGGKKIRGPYCRFCESVDEIVKINVPYGAKLLCQ 269
             TLSDSSQMHVCR CKN+ANVI+RAVPGG+KIRGPYCR C+SVD+IV++NVPYGAKLLCQ
Sbjct: 886  VTLSDSSQMHVCRNCKNVANVIERAVPGGRKIRGPYCRGCQSVDDIVRVNVPYGAKLLCQ 945

Query: 268  ELFSMGISLRFETELC 221
            ELFSMGI+L+FET+LC
Sbjct: 946  ELFSMGINLKFETQLC 961


>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
            vinifera]
          Length = 1198

 Score =  932 bits (2409), Expect = 0.0
 Identities = 451/553 (81%), Positives = 504/553 (91%), Gaps = 6/553 (1%)
 Frame = -1

Query: 1861 RPLLVVENLKKIKILKGDNFSFETLLDKXXXXXXXXXXXEDCRIAWGIKFLFEDKGKD-- 1688
            RPLLVVENLKK+K  KGD+F+F++LLDK           EDC  AWGIK+L   KG D  
Sbjct: 648  RPLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCSTAWGIKYLL--KGHDDP 705

Query: 1687 -TKYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRLDTLT 1511
              KYTHCELDMSFLLG+SCGIIP+ANHDHARRVLYQSEKHS QAIG+S+TNPNIR+DTL+
Sbjct: 706  PVKYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLS 765

Query: 1510 HQMYYPQRPLFRSVISDSLGEP---LGRNQVLPKAEFFNGQNGIVAVNVHLGYNQEDSLV 1340
            HQ+YYPQRPLFR++ISD LG+P    G   ++P+ E+FNGQ  IVAVNVHLGYNQEDSLV
Sbjct: 766  HQLYYPQRPLFRTMISDCLGKPGYSEGHKGIVPRPEYFNGQIAIVAVNVHLGYNQEDSLV 825

Query: 1339 MNRASLERGMFRTEHFRSYKAEVDNNESSEKRRKFEDVVSFGKIQSKIGRVDSLDDDGFP 1160
            MNRASLERGMFR+EH RSYK+EVDNNES +K+RK ED V FGK+QSKIGRVDSLDDDGFP
Sbjct: 826  MNRASLERGMFRSEHIRSYKSEVDNNESLDKKRKSEDSVHFGKMQSKIGRVDSLDDDGFP 885

Query: 1159 FIGANLHSGDIIIGRCAESGADHSVKLKHTERGMVQKVVLSANDDGKTFAVVSLRQVRSP 980
            FIGANL +GDI+IGRCAESG DHS+KLKHTERGMVQKVV+SANDDGK FAVVSLRQVR+P
Sbjct: 886  FIGANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVVSANDDGKNFAVVSLRQVRTP 945

Query: 979  CLGDKFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKG 800
            CLGDKFSSMHGQKGVLG+LESQENFPFT QGIVPDIVINPHAFPSRQTPGQLLEAALGKG
Sbjct: 946  CLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKG 1005

Query: 799  IACGGTLKYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQR 620
            IACGG L++ATPFSTLSV+AI +QLHRAGFSRWG+ERVYNGRTGEM+R+LIFMGPTFYQR
Sbjct: 1006 IACGGLLRHATPFSTLSVDAIADQLHRAGFSRWGHERVYNGRTGEMLRSLIFMGPTFYQR 1065

Query: 619  LIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTL 440
            LIHM+EDKVKFRNTGPVHPLTRQPV+DRKRFGGIKFGEMERDCLIAHGA+ANLHERLFTL
Sbjct: 1066 LIHMAEDKVKFRNTGPVHPLTRQPVSDRKRFGGIKFGEMERDCLIAHGAAANLHERLFTL 1125

Query: 439  SDSSQMHVCRKCKNIANVIQRAVPGGKKIRGPYCRFCESVDEIVKINVPYGAKLLCQELF 260
            SDS+ MH+CR+CKNI+NVIQR+V GG+K+RGPYCR+CES +EIVK+NVPYGAKLLCQELF
Sbjct: 1126 SDSAYMHICRRCKNISNVIQRSVAGGRKVRGPYCRYCESSEEIVKVNVPYGAKLLCQELF 1185

Query: 259  SMGISLRFETELC 221
            SMGISL+FET+LC
Sbjct: 1186 SMGISLKFETQLC 1198


>gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron macrophyllum]
          Length = 1019

 Score =  930 bits (2403), Expect = 0.0
 Identities = 452/551 (82%), Positives = 503/551 (91%), Gaps = 5/551 (0%)
 Frame = -1

Query: 1861 RPLLVVENLKKIKILKGDNFSFETLLDKXXXXXXXXXXXEDCRIAWGIKFLF-EDKGKDT 1685
            RPLLVVENL KIK  KG ++SF++LLDK           EDCR AWGI +LF E++ K T
Sbjct: 468  RPLLVVENLGKIKASKGGDYSFQSLLDKGVIEFIGTEEEEDCRTAWGINYLFMENEAKAT 527

Query: 1684 -KYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRLDTLTH 1508
             KYTHCELDMSFLLG+S  IIPFANHDHARRVLYQSEKHS QA+G+++TNPNIR+DT TH
Sbjct: 528  VKYTHCELDMSFLLGLSAAIIPFANHDHARRVLYQSEKHSQQAMGFNTTNPNIRVDTNTH 587

Query: 1507 QMYYPQRPLFRSVISDSLGEP---LGRNQVLPKAEFFNGQNGIVAVNVHLGYNQEDSLVM 1337
            Q+YYPQRPLFR+++SD LG+P   LG N ++P+AE+FNGQ  IVAVNVHLGYNQEDSLVM
Sbjct: 588  QLYYPQRPLFRTMVSDCLGKPGYPLGHNGIVPRAEYFNGQCAIVAVNVHLGYNQEDSLVM 647

Query: 1336 NRASLERGMFRTEHFRSYKAEVDNNESSEKRRKFEDVVSFGKIQSKIGRVDSLDDDGFPF 1157
            NRASLERGMFR+EH RSYKA+VDN ES  K+ KFED V+FGK+QSKIGRVDSLDDDGFPF
Sbjct: 648  NRASLERGMFRSEHIRSYKADVDNKESVGKKPKFEDSVNFGKVQSKIGRVDSLDDDGFPF 707

Query: 1156 IGANLHSGDIIIGRCAESGADHSVKLKHTERGMVQKVVLSANDDGKTFAVVSLRQVRSPC 977
            IGANL +GDI++GRCAESGADHS+KLKHTERGMVQKVVLSAND+GK FAVVSLRQVR+PC
Sbjct: 708  IGANLQNGDIVVGRCAESGADHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRTPC 767

Query: 976  LGDKFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGI 797
            LGDKFSSMHGQKGVLG+LESQENFPFT QGIVPDIV+NPHAFPSRQTPGQLLEAALGKGI
Sbjct: 768  LGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVVNPHAFPSRQTPGQLLEAALGKGI 827

Query: 796  ACGGTLKYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQRL 617
            ACGG  KYATPFSTLSV+A+T+QLHRAGFSRWG+ERVYNGRTGEMI +L+FMGPTFYQRL
Sbjct: 828  ACGGLQKYATPFSTLSVDAVTDQLHRAGFSRWGSERVYNGRTGEMIHSLVFMGPTFYQRL 887

Query: 616  IHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLS 437
             HMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA+ANLHERLFTLS
Sbjct: 888  THMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLS 947

Query: 436  DSSQMHVCRKCKNIANVIQRAVPGGKKIRGPYCRFCESVDEIVKINVPYGAKLLCQELFS 257
            DSSQMH+CRKC NIANVIQRAVPGG+KIRGPYCRFCESV+EIV++NVPYGAKLL QELFS
Sbjct: 948  DSSQMHICRKCNNIANVIQRAVPGGRKIRGPYCRFCESVEEIVRVNVPYGAKLLAQELFS 1007

Query: 256  MGISLRFETEL 224
            MGI+++F+TEL
Sbjct: 1008 MGITMKFDTEL 1018


>ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis
            sativus]
          Length = 1197

 Score =  923 bits (2385), Expect = 0.0
 Identities = 445/550 (80%), Positives = 499/550 (90%), Gaps = 3/550 (0%)
 Frame = -1

Query: 1861 RPLLVVENLKKIKILKGDNFSFETLLDKXXXXXXXXXXXEDCRIAWGIKFLFEDKGKDTK 1682
            RPLLVVENL +I   KG+N++F++LLDK           EDCR+AW IK L ED+G  TK
Sbjct: 649  RPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRVAWSIKHLMEDEGT-TK 707

Query: 1681 YTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRLDTLTHQM 1502
            Y+HCELDMSFLLG+SCG++PFANHDHARR L+QS+KHS QAIG+S TN N R+DTL+HQ+
Sbjct: 708  YSHCELDMSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSPTNSNFRVDTLSHQL 767

Query: 1501 YYPQRPLFRSVISDSLGEP---LGRNQVLPKAEFFNGQNGIVAVNVHLGYNQEDSLVMNR 1331
            +YPQRPLFR++ +D LG P        +LPK EF+NGQN IVAVNVHLGYNQEDSLVMNR
Sbjct: 768  HYPQRPLFRTMTADCLGTPGYLSSHAGILPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNR 827

Query: 1330 ASLERGMFRTEHFRSYKAEVDNNESSEKRRKFEDVVSFGKIQSKIGRVDSLDDDGFPFIG 1151
            ASLERGMFR+EH RSYKAEVDN ESSEKRRK +D ++FGK QSKIGRVDSLDDDGFP+IG
Sbjct: 828  ASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIG 887

Query: 1150 ANLHSGDIIIGRCAESGADHSVKLKHTERGMVQKVVLSANDDGKTFAVVSLRQVRSPCLG 971
            ANL SGDI+IGRCAESGADHS+KLKHTE+GMVQKVVLS+NDDGK +AVVSLRQVRSPCLG
Sbjct: 888  ANLQSGDIVIGRCAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVSLRQVRSPCLG 947

Query: 970  DKFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAC 791
            DKFSSMHGQKGVLG+LESQENFPFT QGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA 
Sbjct: 948  DKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAA 1007

Query: 790  GGTLKYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQRLIH 611
            GG+LKYATPFST SV+AIT+QLHRAGFSRWG+ERVYNGRTGEM+R+LIFMGPTFYQRLIH
Sbjct: 1008 GGSLKYATPFSTPSVDAITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIH 1067

Query: 610  MSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDS 431
            M+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDS
Sbjct: 1068 MAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDS 1127

Query: 430  SQMHVCRKCKNIANVIQRAVPGGKKIRGPYCRFCESVDEIVKINVPYGAKLLCQELFSMG 251
            SQMHVC+KCKN+A+VIQR+V GG+K+RGPYCR CES D+IV++NVPYGAKLLCQELFSMG
Sbjct: 1128 SQMHVCQKCKNVASVIQRSVAGGRKMRGPYCRVCESFDDIVRVNVPYGAKLLCQELFSMG 1187

Query: 250  ISLRFETELC 221
            I+L+FET+LC
Sbjct: 1188 INLKFETQLC 1197


>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score =  922 bits (2383), Expect = 0.0
 Identities = 448/550 (81%), Positives = 498/550 (90%), Gaps = 3/550 (0%)
 Frame = -1

Query: 1861 RPLLVVENLKKIKILKGDNFSFETLLDKXXXXXXXXXXXEDCRIAWGIKFLFEDKGKD-- 1688
            RPLLVVENLKK+K  KGD+F+F++LLDK           EDC  AWGIK+L   KG D  
Sbjct: 684  RPLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCSTAWGIKYLL--KGHDDP 741

Query: 1687 -TKYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRLDTLT 1511
              KYTHCELDMSFLLG+SCGIIP+ANHDHARRVLYQSEKHS QAIG+S+TNPNIR+DTL+
Sbjct: 742  PVKYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLS 801

Query: 1510 HQMYYPQRPLFRSVISDSLGEPLGRNQVLPKAEFFNGQNGIVAVNVHLGYNQEDSLVMNR 1331
            HQ+YYPQRPLFR++ISD           LP+ E+FNGQ  IVAVNVHLGYNQEDSLVMNR
Sbjct: 802  HQLYYPQRPLFRTMISD-----------LPRPEYFNGQIAIVAVNVHLGYNQEDSLVMNR 850

Query: 1330 ASLERGMFRTEHFRSYKAEVDNNESSEKRRKFEDVVSFGKIQSKIGRVDSLDDDGFPFIG 1151
            ASLERGMFR+EH RSYK+EVDNNES +K+RK ED V FGK+QSKIGRVDSLDDDGFPFIG
Sbjct: 851  ASLERGMFRSEHIRSYKSEVDNNESLDKKRKSEDSVHFGKMQSKIGRVDSLDDDGFPFIG 910

Query: 1150 ANLHSGDIIIGRCAESGADHSVKLKHTERGMVQKVVLSANDDGKTFAVVSLRQVRSPCLG 971
            ANL +GDI+IGRCAESG DHS+KLKHTERGMVQKVV+SANDDGK FAVVSLRQVR+PCLG
Sbjct: 911  ANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVVSANDDGKNFAVVSLRQVRTPCLG 970

Query: 970  DKFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAC 791
            DKFSSMHGQKGVLG+LESQENFPFT QGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAC
Sbjct: 971  DKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAC 1030

Query: 790  GGTLKYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQRLIH 611
            GG L++ATPFSTLSV+AI +QLHRAGFSRWG+ERVYNGRTGEM+R+LIFMGPTFYQRLIH
Sbjct: 1031 GGLLRHATPFSTLSVDAIADQLHRAGFSRWGHERVYNGRTGEMLRSLIFMGPTFYQRLIH 1090

Query: 610  MSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDS 431
            M+EDKVKFRNTGPVHPLTRQPV+DRKRFGGIKFGEMERDCLIAHGA+ANLHERLFTLSDS
Sbjct: 1091 MAEDKVKFRNTGPVHPLTRQPVSDRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDS 1150

Query: 430  SQMHVCRKCKNIANVIQRAVPGGKKIRGPYCRFCESVDEIVKINVPYGAKLLCQELFSMG 251
            + MH+CR+CKNI+NVIQR+V GG+K+RGPYCR+CES +EIVK+NVPYGAKLLCQELFSMG
Sbjct: 1151 AYMHICRRCKNISNVIQRSVAGGRKVRGPYCRYCESSEEIVKVNVPYGAKLLCQELFSMG 1210

Query: 250  ISLRFETELC 221
            ISL+FET+LC
Sbjct: 1211 ISLKFETQLC 1220


>ref|XP_002324332.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|550317882|gb|EEF02897.2| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 1181

 Score =  917 bits (2371), Expect = 0.0
 Identities = 448/548 (81%), Positives = 495/548 (90%), Gaps = 2/548 (0%)
 Frame = -1

Query: 1861 RPLLVVENLKKIKILKGDNFSFETLLDKXXXXXXXXXXXEDCRIAWGIKFLFED-KGKDT 1685
            RPLLVVENL KIK  KG N+ F +LLDK           EDC  AWGIKFL  D +GK  
Sbjct: 641  RPLLVVENLDKIKAFKGGNYIFTSLLDKGIIEFIGTEEEEDCCTAWGIKFLLADIEGKQP 700

Query: 1684 -KYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRLDTLTH 1508
             KY+HCELDMSFLLG+SCGIIPFANHDHARRVLYQ++KHS QAIG+S+TNPNIR+DTL+H
Sbjct: 701  MKYSHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSH 760

Query: 1507 QMYYPQRPLFRSVISDSLGEPLGRNQVLPKAEFFNGQNGIVAVNVHLGYNQEDSLVMNRA 1328
            Q++YPQRPLFR++ISD L        VLPK E FNGQN IVAVNVHLGYNQEDSLVMNRA
Sbjct: 761  QLHYPQRPLFRTMISDCL--------VLPKPELFNGQNAIVAVNVHLGYNQEDSLVMNRA 812

Query: 1327 SLERGMFRTEHFRSYKAEVDNNESSEKRRKFEDVVSFGKIQSKIGRVDSLDDDGFPFIGA 1148
            SLERGMFR+EH RSYKAEVDN E ++KRRK ED ++FGKIQSKIGRVDSLDDDGFPFIGA
Sbjct: 813  SLERGMFRSEHIRSYKAEVDNKELTDKRRKSEDSITFGKIQSKIGRVDSLDDDGFPFIGA 872

Query: 1147 NLHSGDIIIGRCAESGADHSVKLKHTERGMVQKVVLSANDDGKTFAVVSLRQVRSPCLGD 968
            N+ SGDI+IG+CAESGADHSVKLKHTERGMVQKVVLS+ND+GK FAVVSLRQVRSPCLGD
Sbjct: 873  NMQSGDIVIGKCAESGADHSVKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQVRSPCLGD 932

Query: 967  KFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACG 788
            KFSSMHGQKGVLG+LESQENFPFT QG+VPDIVINPHAFPSRQTPGQLLEAALGKGIACG
Sbjct: 933  KFSSMHGQKGVLGFLESQENFPFTIQGVVPDIVINPHAFPSRQTPGQLLEAALGKGIACG 992

Query: 787  GTLKYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQRLIHM 608
            G+ +YATPFSTLSV+ I +QLHRA FSRWGNERVYNGRTGEM+R+LIFMGPTFYQRL+HM
Sbjct: 993  GSKRYATPFSTLSVDDIIDQLHRAKFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLVHM 1052

Query: 607  SEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSS 428
            +EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSS
Sbjct: 1053 AEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSS 1112

Query: 427  QMHVCRKCKNIANVIQRAVPGGKKIRGPYCRFCESVDEIVKINVPYGAKLLCQELFSMGI 248
            +MH+C+KCKN+ANVIQR VPGG+KIRGPYCR CESVD++VK++VPYGAKLLCQELFSMGI
Sbjct: 1113 EMHICQKCKNVANVIQRGVPGGRKIRGPYCRVCESVDDLVKVSVPYGAKLLCQELFSMGI 1172

Query: 247  SLRFETEL 224
            SL+F+T +
Sbjct: 1173 SLKFDTRV 1180


>gb|EMJ26641.1| hypothetical protein PRUPE_ppa000410mg [Prunus persica]
          Length = 1200

 Score =  914 bits (2361), Expect = 0.0
 Identities = 439/549 (79%), Positives = 494/549 (89%), Gaps = 2/549 (0%)
 Frame = -1

Query: 1861 RPLLVVENLKKIKILKGDNFSFETLLDKXXXXXXXXXXXEDCRIAWGIKFLF-EDKGKD- 1688
            RPLLVVENL K+K  KG   SF+  LD            EDC  AWGIK+LF EDKGK  
Sbjct: 652  RPLLVVENLNKVKASKGGKSSFQYFLDNGIIELIGAEEEEDCSTAWGIKYLFMEDKGKSA 711

Query: 1687 TKYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRLDTLTH 1508
            TK+THCELDMSFLLG+SCGIIP+ANHDHARRVLYQ++KHS QAIG+S+TNPN+R+DTL+H
Sbjct: 712  TKFTHCELDMSFLLGLSCGIIPYANHDHARRVLYQAQKHSQQAIGFSTTNPNLRVDTLSH 771

Query: 1507 QMYYPQRPLFRSVISDSLGEPLGRNQVLPKAEFFNGQNGIVAVNVHLGYNQEDSLVMNRA 1328
            Q++YPQRPLF+++ SD LG+P   N+++PK E++NGQN IVAVNVHLG+NQEDS+VMNRA
Sbjct: 772  QLHYPQRPLFQTMTSDCLGKPGRHNRIVPKPEYYNGQNAIVAVNVHLGFNQEDSIVMNRA 831

Query: 1327 SLERGMFRTEHFRSYKAEVDNNESSEKRRKFEDVVSFGKIQSKIGRVDSLDDDGFPFIGA 1148
            SLERGMFR+EH RSYKAEVDN ES +KRRK +D V+FGK+QSK GRVDSLDDDGFP++GA
Sbjct: 832  SLERGMFRSEHIRSYKAEVDNKESLDKRRKPDDCVNFGKMQSKFGRVDSLDDDGFPYVGA 891

Query: 1147 NLHSGDIIIGRCAESGADHSVKLKHTERGMVQKVVLSANDDGKTFAVVSLRQVRSPCLGD 968
            NL SGDIIIGRC+ESGADHS+KLKHTERGMVQKV+LS+NDDGK FAVVSLRQVRSPCLGD
Sbjct: 892  NLQSGDIIIGRCSESGADHSIKLKHTERGMVQKVLLSSNDDGKNFAVVSLRQVRSPCLGD 951

Query: 967  KFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACG 788
            KFSSMHGQKGVLG+LESQENFPFT QG+VPDIVINPHAFPSRQTPGQLLEAALGKGIACG
Sbjct: 952  KFSSMHGQKGVLGFLESQENFPFTIQGVVPDIVINPHAFPSRQTPGQLLEAALGKGIACG 1011

Query: 787  GTLKYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQRLIHM 608
            G+ +YATPFSTLSV+ IT+QLH AGFSRWGNERVYNG TG M+R+LIFMGPTFYQRLIHM
Sbjct: 1012 GSKRYATPFSTLSVDDITDQLHSAGFSRWGNERVYNGATGAMVRSLIFMGPTFYQRLIHM 1071

Query: 607  SEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSS 428
            SEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSS
Sbjct: 1072 SEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSS 1131

Query: 427  QMHVCRKCKNIANVIQRAVPGGKKIRGPYCRFCESVDEIVKINVPYGAKLLCQELFSMGI 248
            QMHVC+KCKN+A VI R V GG+KIRGP+CR C+S D++V++NVPYGAKLLCQELFSMGI
Sbjct: 1132 QMHVCQKCKNVAYVILRTVAGGRKIRGPHCRICDSADDLVRVNVPYGAKLLCQELFSMGI 1191

Query: 247  SLRFETELC 221
            SL+FET  C
Sbjct: 1192 SLKFETRFC 1200


>ref|XP_003523670.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Glycine max]
          Length = 1205

 Score =  909 bits (2350), Expect = 0.0
 Identities = 441/551 (80%), Positives = 497/551 (90%), Gaps = 4/551 (0%)
 Frame = -1

Query: 1861 RPLLVVENLKKIKILKGDNFSFETLLDKXXXXXXXXXXXEDCRIAWGIKFLFEDKGK-DT 1685
            RPLLVV NL KIK  K D +SF++LLDK           EDC  AWG+++LF  +GK   
Sbjct: 655  RPLLVVGNLLKIKGFKSDRYSFQSLLDKGVIELIGPEEEEDCCTAWGVEYLFGKEGKRSV 714

Query: 1684 KYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRLDTLTHQ 1505
            KYTHCELDMSFLLG+SC ++PFANHDHARRVLYQS+KHS QAIG+S+TNPNIR+DTL+HQ
Sbjct: 715  KYTHCELDMSFLLGLSCSLVPFANHDHARRVLYQSQKHSSQAIGFSTTNPNIRVDTLSHQ 774

Query: 1504 MYYPQRPLFRSVISDSLGEP---LGRNQVLPKAEFFNGQNGIVAVNVHLGYNQEDSLVMN 1334
            ++YPQ+PLFR++ SD LG+P   LG++++ PKAEF+NGQN IVAVNVHLGYNQEDSLVMN
Sbjct: 775  LHYPQKPLFRTMTSDCLGKPDHSLGQSKIPPKAEFYNGQNAIVAVNVHLGYNQEDSLVMN 834

Query: 1333 RASLERGMFRTEHFRSYKAEVDNNESSEKRRKFEDVVSFGKIQSKIGRVDSLDDDGFPFI 1154
            RASL+RGMFR+EH RSYK+E+DN ESS+K+RK ED+V+F K+QSKIGRVDSLDDDGFP++
Sbjct: 835  RASLQRGMFRSEHIRSYKSEIDNKESSDKKRKPEDIVNFAKLQSKIGRVDSLDDDGFPYV 894

Query: 1153 GANLHSGDIIIGRCAESGADHSVKLKHTERGMVQKVVLSANDDGKTFAVVSLRQVRSPCL 974
            GANL SGDIIIG+CAESGAD+SVKLKHTERG VQKVVLS+ND+GK FAVVSLRQVRSP L
Sbjct: 895  GANLQSGDIIIGKCAESGADNSVKLKHTERGYVQKVVLSSNDEGKNFAVVSLRQVRSPVL 954

Query: 973  GDKFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA 794
            GDKFSSMHGQKGVLG+LESQENFPFT+QGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA
Sbjct: 955  GDKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA 1014

Query: 793  CGGTLKYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQRLI 614
            CGG LK ATPFST SV+AITEQLHRAGFSRWGNERVYNGRTGEM+R+LIFMGPTFYQRL 
Sbjct: 1015 CGGILKQATPFSTPSVDAITEQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLH 1074

Query: 613  HMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSD 434
            HMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANL+ERLFTLSD
Sbjct: 1075 HMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLYERLFTLSD 1134

Query: 433  SSQMHVCRKCKNIANVIQRAVPGGKKIRGPYCRFCESVDEIVKINVPYGAKLLCQELFSM 254
            SSQ+H+C KCK +ANVI R V GG+KIRGPYCR CES D+IV  +VPYGAKLLCQELFSM
Sbjct: 1135 SSQIHICSKCKKVANVILRPVSGGRKIRGPYCRHCESADDIVVAHVPYGAKLLCQELFSM 1194

Query: 253  GISLRFETELC 221
            GI+L+FET+LC
Sbjct: 1195 GINLKFETQLC 1205


>ref|XP_004288915.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Fragaria
            vesca subsp. vesca]
          Length = 1201

 Score =  906 bits (2342), Expect = 0.0
 Identities = 441/551 (80%), Positives = 492/551 (89%), Gaps = 4/551 (0%)
 Frame = -1

Query: 1861 RPLLVVENLKKIKILKGDNFSFETLLDKXXXXXXXXXXXEDCRIAWGIKFLF-EDKGKDT 1685
            RPLLVV+ LKKIK  KG+  +F+  LDK           EDCR AW IK+LF E++G   
Sbjct: 651  RPLLVVQGLKKIKAAKGEKHTFQDFLDKGIIEFIGAEEEEDCRTAWAIKYLFMEEQGSVV 710

Query: 1684 KYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRLDTLTHQ 1505
            KYTHCELDMSFLLG+SCGIIPFANHDHARRVLYQS+KHS QAIGYS+TNPN+R+DTL+H 
Sbjct: 711  KYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSQQAIGYSTTNPNLRVDTLSHN 770

Query: 1504 MYYPQRPLFRSVISDSLGEP---LGRNQVLPKAEFFNGQNGIVAVNVHLGYNQEDSLVMN 1334
            ++YPQRPLFR++I+DSLG+P   +G N  +PK E+FNGQN IVAVNVHLGYNQEDS+VMN
Sbjct: 771  LHYPQRPLFRTMIADSLGKPGYPVGHNGFMPKPEYFNGQNAIVAVNVHLGYNQEDSIVMN 830

Query: 1333 RASLERGMFRTEHFRSYKAEVDNNESSEKRRKFEDVVSFGKIQSKIGRVDSLDDDGFPFI 1154
            RASLERGMFR+EH RSYKAEV+N  S EKRRK ++ V+FGKIQSK GRVD+LDDDGFP +
Sbjct: 831  RASLERGMFRSEHIRSYKAEVENKLSLEKRRKPDECVNFGKIQSKFGRVDNLDDDGFPCV 890

Query: 1153 GANLHSGDIIIGRCAESGADHSVKLKHTERGMVQKVVLSANDDGKTFAVVSLRQVRSPCL 974
            GA+L SGDIIIGRC+ESG DHS+KLKHTERGMVQKVVLS+ND GK FAVVSLRQVRSP L
Sbjct: 891  GASLQSGDIIIGRCSESGTDHSIKLKHTERGMVQKVVLSSNDAGKNFAVVSLRQVRSPSL 950

Query: 973  GDKFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA 794
            GDKFSSMHGQKGVLG+LE QENFPFT QGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA
Sbjct: 951  GDKFSSMHGQKGVLGFLEYQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA 1010

Query: 793  CGGTLKYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQRLI 614
            CGG+ +YATPFSTLSV+ IT+QLHRAGFSRWGNERVYNGRTGEM+R LIFMGPTFYQRLI
Sbjct: 1011 CGGSKRYATPFSTLSVDDITDQLHRAGFSRWGNERVYNGRTGEMVRQLIFMGPTFYQRLI 1070

Query: 613  HMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSD 434
            HMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSD
Sbjct: 1071 HMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSD 1130

Query: 433  SSQMHVCRKCKNIANVIQRAVPGGKKIRGPYCRFCESVDEIVKINVPYGAKLLCQELFSM 254
            SS M+VC+KC+N ANVI+R + GG+KIRGPYCR C+S D+IV++NVPYGAKLLCQELFSM
Sbjct: 1131 SSLMNVCQKCQNAANVIERKLTGGRKIRGPYCRVCDSADDIVRVNVPYGAKLLCQELFSM 1190

Query: 253  GISLRFETELC 221
            GISL+FET LC
Sbjct: 1191 GISLKFETRLC 1201


>ref|XP_004501385.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cicer
            arietinum]
          Length = 1199

 Score =  906 bits (2341), Expect = 0.0
 Identities = 441/550 (80%), Positives = 496/550 (90%), Gaps = 3/550 (0%)
 Frame = -1

Query: 1861 RPLLVVENLKKIKILKGDNFSFETLLDKXXXXXXXXXXXEDCRIAWGIKFLFEDKGKDT- 1685
            RPLLVV NL KIK  K D  SF++LLD            EDC+ AWG+ +LF  +GK + 
Sbjct: 650  RPLLVVSNLLKIKGSKSDPKSFQSLLDNGLIELIGPEEEEDCKTAWGVPYLFGKEGKSSV 709

Query: 1684 KYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRLDTLTHQ 1505
            KYTHCELDMSFLLG+SC ++PFANHDHARRVLYQS+KHS QAIG+S+TNP+IR+D L+HQ
Sbjct: 710  KYTHCELDMSFLLGLSCSLVPFANHDHARRVLYQSQKHSSQAIGFSTTNPDIRVDALSHQ 769

Query: 1504 MYYPQRPLFRSVISDSLGEP--LGRNQVLPKAEFFNGQNGIVAVNVHLGYNQEDSLVMNR 1331
            ++YPQ+PLF+++ SD LG+P  LG +++LPK+EF+NGQN IVAVNVHLGYNQEDSLVMNR
Sbjct: 770  LFYPQKPLFQTMTSDCLGKPGYLGPSKLLPKSEFYNGQNAIVAVNVHLGYNQEDSLVMNR 829

Query: 1330 ASLERGMFRTEHFRSYKAEVDNNESSEKRRKFEDVVSFGKIQSKIGRVDSLDDDGFPFIG 1151
            ASL+RGMFR+EH RSYKAE +N ES+EK+RK ED+V+FGKIQSKIGRVDSLDDDGFPF+G
Sbjct: 830  ASLQRGMFRSEHIRSYKAENENKESTEKKRKPEDIVNFGKIQSKIGRVDSLDDDGFPFVG 889

Query: 1150 ANLHSGDIIIGRCAESGADHSVKLKHTERGMVQKVVLSANDDGKTFAVVSLRQVRSPCLG 971
            ANL  GDIIIGRCA+SGADHS+KLKHTERG VQKVVLS+ND+GK FAVVSLRQVRSP LG
Sbjct: 890  ANLQIGDIIIGRCADSGADHSIKLKHTERGYVQKVVLSSNDEGKNFAVVSLRQVRSPVLG 949

Query: 970  DKFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAC 791
            DKFSSMHGQKGVLG+LESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAC
Sbjct: 950  DKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAC 1009

Query: 790  GGTLKYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQRLIH 611
             G+L+ ATPFST SVEAIT+QLHRAGFSRWGNERVYNGRTGEM+R+LIFMGPTFYQRL H
Sbjct: 1010 VGSLRNATPFSTSSVEAITDQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLHH 1069

Query: 610  MSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDS 431
            MSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANL+ERLFTLSDS
Sbjct: 1070 MSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLYERLFTLSDS 1129

Query: 430  SQMHVCRKCKNIANVIQRAVPGGKKIRGPYCRFCESVDEIVKINVPYGAKLLCQELFSMG 251
            SQ+H+C KCKN+ANVI R V GG+KIRGPYCRFCES D+IV  +VPYGAKLLCQELFSMG
Sbjct: 1130 SQIHICSKCKNVANVILRPVSGGRKIRGPYCRFCESADDIVVAHVPYGAKLLCQELFSMG 1189

Query: 250  ISLRFETELC 221
            I+L+FETELC
Sbjct: 1190 INLKFETELC 1199


>ref|XP_003603295.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
            gi|355492343|gb|AES73546.1| DNA-directed RNA polymerase
            subunit beta [Medicago truncatula]
          Length = 1237

 Score =  905 bits (2340), Expect = 0.0
 Identities = 440/550 (80%), Positives = 498/550 (90%), Gaps = 3/550 (0%)
 Frame = -1

Query: 1861 RPLLVVENLKKIKILKGDNFSFETLLDKXXXXXXXXXXXEDCRIAWGIKFLFEDKGKDT- 1685
            RPLLVV NL KIK  K ++ SF++LLD            ED + AWG+++LF  +GK + 
Sbjct: 688  RPLLVVSNLLKIKGSKSEHKSFQSLLDNGVIELIGPEEEEDFKTAWGVQYLFGKEGKSSV 747

Query: 1684 KYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRLDTLTHQ 1505
            KYTHCELDMSFLLG+SC ++PFANHDHARRVLYQS+KHS QAIG+++TNPNIR+D L+HQ
Sbjct: 748  KYTHCELDMSFLLGLSCSLVPFANHDHARRVLYQSQKHSSQAIGFATTNPNIRVDALSHQ 807

Query: 1504 MYYPQRPLFRSVISDSLGEP--LGRNQVLPKAEFFNGQNGIVAVNVHLGYNQEDSLVMNR 1331
            ++YPQRPLF+++ SD LG+P  LG+++V+PK+EF+NGQN IVAVNVHLGYNQEDSLVMNR
Sbjct: 808  LFYPQRPLFQTMTSDCLGKPGYLGQSKVVPKSEFYNGQNAIVAVNVHLGYNQEDSLVMNR 867

Query: 1330 ASLERGMFRTEHFRSYKAEVDNNESSEKRRKFEDVVSFGKIQSKIGRVDSLDDDGFPFIG 1151
            ASL+RGMFR+EH RSYKAE++N ESSEKR+K ED+V+FGKIQSKIGRVDSLDDDGFPF+G
Sbjct: 868  ASLQRGMFRSEHIRSYKAEIENKESSEKRKKPEDIVNFGKIQSKIGRVDSLDDDGFPFVG 927

Query: 1150 ANLHSGDIIIGRCAESGADHSVKLKHTERGMVQKVVLSANDDGKTFAVVSLRQVRSPCLG 971
            ANL SGDIIIGRCA+SG DHS+KLKHTERG VQKVVLS+ND+GK FAVVSLRQVRSP LG
Sbjct: 928  ANLQSGDIIIGRCADSGTDHSIKLKHTERGYVQKVVLSSNDEGKNFAVVSLRQVRSPVLG 987

Query: 970  DKFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAC 791
            DKFSSMHGQKGVLG+LESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAC
Sbjct: 988  DKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAC 1047

Query: 790  GGTLKYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQRLIH 611
             G+L+ ATPFST SVEAIT+QLHRAGFSRWGNERVYNGRTGEM+R+LIFMGPTFYQRL H
Sbjct: 1048 VGSLRNATPFSTSSVEAITDQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLHH 1107

Query: 610  MSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDS 431
            MSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANL+ERLFTLSDS
Sbjct: 1108 MSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLYERLFTLSDS 1167

Query: 430  SQMHVCRKCKNIANVIQRAVPGGKKIRGPYCRFCESVDEIVKINVPYGAKLLCQELFSMG 251
            SQ+H+C KCKN+ANVI R V GG+KIRGPYCRFCES D+IV  +VPYGAKLL QELFSMG
Sbjct: 1168 SQIHICSKCKNVANVILRPVSGGRKIRGPYCRFCESADDIVVASVPYGAKLLSQELFSMG 1227

Query: 250  ISLRFETELC 221
            I+L+FETELC
Sbjct: 1228 INLKFETELC 1237


>gb|ESW08936.1| hypothetical protein PHAVU_009G087100g [Phaseolus vulgaris]
          Length = 1202

 Score =  900 bits (2327), Expect = 0.0
 Identities = 433/551 (78%), Positives = 494/551 (89%), Gaps = 4/551 (0%)
 Frame = -1

Query: 1861 RPLLVVENLKKIKILKGDNFSFETLLDKXXXXXXXXXXXEDCRIAWGIKFLFEDKGK-DT 1685
            RPLLVV NL +IK  K D +SF TLL++           EDC  AWG+++LF  +GK   
Sbjct: 652  RPLLVVGNLLRIKRFKSDRYSFRTLLEEGVIELIGPEEEEDCCTAWGVQYLFGKEGKRSV 711

Query: 1684 KYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRLDTLTHQ 1505
            KYTHCELDMSFLLG+SC ++PFANHDHARRVLYQS+KHS QAIG+S+ NPN R+DTL+HQ
Sbjct: 712  KYTHCELDMSFLLGLSCSLVPFANHDHARRVLYQSQKHSSQAIGFSTLNPNTRIDTLSHQ 771

Query: 1504 MYYPQRPLFRSVISDSLGEP---LGRNQVLPKAEFFNGQNGIVAVNVHLGYNQEDSLVMN 1334
            ++YPQRPLF+++ SD LG+P   LG++++ PKAEF+NGQN IVAVNVHLGYNQEDSLVMN
Sbjct: 772  LHYPQRPLFQTMASDCLGKPTSPLGQSKIHPKAEFYNGQNAIVAVNVHLGYNQEDSLVMN 831

Query: 1333 RASLERGMFRTEHFRSYKAEVDNNESSEKRRKFEDVVSFGKIQSKIGRVDSLDDDGFPFI 1154
            RASL+RGMFR+EH RSYK+E+DN +SSEK+RK ED+V+FGK+QSKIGRVDSLDDDGFP++
Sbjct: 832  RASLQRGMFRSEHIRSYKSEIDNKQSSEKKRKSEDIVNFGKLQSKIGRVDSLDDDGFPYV 891

Query: 1153 GANLHSGDIIIGRCAESGADHSVKLKHTERGMVQKVVLSANDDGKTFAVVSLRQVRSPCL 974
            GANL SGDIIIGRCAESGAD+SVKLKHTERG VQKVVLS+ND+GK FA VSLRQVRSP L
Sbjct: 892  GANLQSGDIIIGRCAESGADNSVKLKHTERGYVQKVVLSSNDEGKNFAAVSLRQVRSPVL 951

Query: 973  GDKFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA 794
            GDKFSSMHGQKGVLG+LE QENFPFT+QGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA
Sbjct: 952  GDKFSSMHGQKGVLGFLECQENFPFTRQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA 1011

Query: 793  CGGTLKYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQRLI 614
            CGG L++ATPFST SV+AIT+QLHRAGFSRWGNERVYNGRTGEM+R+LIFMGPTFYQRL 
Sbjct: 1012 CGGKLRHATPFSTPSVDAITDQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLH 1071

Query: 613  HMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSD 434
            HMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANL+ERLFTLSD
Sbjct: 1072 HMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLYERLFTLSD 1131

Query: 433  SSQMHVCRKCKNIANVIQRAVPGGKKIRGPYCRFCESVDEIVKINVPYGAKLLCQELFSM 254
            SSQ+H+C  CKN++NVI R V GG+K+RGPYCR CES D+IV  +VPYGAKLLCQELFSM
Sbjct: 1132 SSQIHICSGCKNVSNVIMRPVSGGRKVRGPYCRHCESADDIVVAHVPYGAKLLCQELFSM 1191

Query: 253  GISLRFETELC 221
            GI+L+FET+LC
Sbjct: 1192 GINLKFETQLC 1202


>ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citrus clementina]
            gi|568850178|ref|XP_006478802.1| PREDICTED: DNA-directed
            RNA polymerases IV and V subunit 2-like [Citrus sinensis]
            gi|557545145|gb|ESR56123.1| hypothetical protein
            CICLE_v10018562mg [Citrus clementina]
          Length = 1198

 Score =  900 bits (2325), Expect = 0.0
 Identities = 438/556 (78%), Positives = 491/556 (88%), Gaps = 9/556 (1%)
 Frame = -1

Query: 1861 RPLLVVENLKKIKILKGDNFSFETLLDKXXXXXXXXXXXEDCRIAWGIKFLFED--KGKD 1688
            RPLLVVEN+ KIK L+G N++F+ LLD            EDC  AWGIK+L +D    K 
Sbjct: 643  RPLLVVENMGKIKSLEGKNYTFQALLDHGIIELVGTEEEEDCCTAWGIKYLLKDIEDKKP 702

Query: 1687 TKYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRLDTLTH 1508
             K+THCELDMSFLLG+SCGIIPFANHDHARRVLYQS+KHS QAIG+ +TNP+IR+DTL+H
Sbjct: 703  IKFTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPSIRVDTLSH 762

Query: 1507 QMYYPQRPLFRSVISDSLGEP-LGRNQVLPKAEFFNGQNGIVAVNVHLGYNQEDSLVMNR 1331
            Q++YPQRPLFR++ISD LG+P  G N +LP+ E +NGQN IVAVNVHLGYNQEDSLVMNR
Sbjct: 763  QLFYPQRPLFRTMISDCLGKPGYGHNHILPRPELYNGQNAIVAVNVHLGYNQEDSLVMNR 822

Query: 1330 ASLERGMFRTEHFRSYKAEVDNNESSEKRRKFEDVVSFGKIQSKIGRVDSLDDDGFPFIG 1151
            ASLERGMFR+EH RSYKAEVDN E   KRR  +D+V+FGKIQSKIGRVDSLDDDGFPFIG
Sbjct: 823  ASLERGMFRSEHIRSYKAEVDNKEMQVKRRSSDDMVNFGKIQSKIGRVDSLDDDGFPFIG 882

Query: 1150 ANLHSGDIIIGRCAESGADHSVKLKHTERGMVQKVVLSANDDGKTFAVVSLRQVRSPCLG 971
            ANL  GDI+IG+ A+SGADHS+KLKHTERGMVQKVVLS+NDDGK F+VVSLRQVRSPCLG
Sbjct: 883  ANLQCGDIVIGKYADSGADHSIKLKHTERGMVQKVVLSSNDDGKNFSVVSLRQVRSPCLG 942

Query: 970  DKFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA- 794
            DKFSSMHGQKGVLG+LESQENFPFT QGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA 
Sbjct: 943  DKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAA 1002

Query: 793  -----CGGTLKYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTF 629
                 C G  +YATPF+T SV+AITEQLHRAGFS+WG ER+Y+GRTGEM+R+LIF+GPTF
Sbjct: 1003 LGKGICSGLKRYATPFATPSVDAITEQLHRAGFSKWGTERLYDGRTGEMVRSLIFIGPTF 1062

Query: 628  YQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERL 449
            YQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA+ANLHERL
Sbjct: 1063 YQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERL 1122

Query: 448  FTLSDSSQMHVCRKCKNIANVIQRAVPGGKKIRGPYCRFCESVDEIVKINVPYGAKLLCQ 269
            FTLSDS QMH+CRKCKN+ANVIQR V GG+K+RGPYCR C+S D+IVK NVPYGAKLLCQ
Sbjct: 1123 FTLSDSYQMHICRKCKNVANVIQRVVGGGRKVRGPYCRICDSGDDIVKANVPYGAKLLCQ 1182

Query: 268  ELFSMGISLRFETELC 221
            ELFSMGI+L+F+TE C
Sbjct: 1183 ELFSMGITLKFDTEFC 1198


>ref|XP_003527775.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Glycine max]
          Length = 1205

 Score =  899 bits (2324), Expect = 0.0
 Identities = 441/554 (79%), Positives = 496/554 (89%), Gaps = 7/554 (1%)
 Frame = -1

Query: 1861 RPLLVVENLKKIKILKGDNFSFETLLDKXXXXXXXXXXXEDCRIAWGIKFLFEDKGK-DT 1685
            RPLLVV NL KIK  K D  SF++LLDK           EDC  AWG+++LF  +GK   
Sbjct: 652  RPLLVVGNLLKIKGFKSDCNSFQSLLDKGVIELIGPEEEEDCCTAWGVEYLFGKEGKRSV 711

Query: 1684 KYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRLDTLTHQ 1505
            KYTHCELDMSFLLG+SC ++PFANHDHARRVLYQS+KHS QAIG+S+TNPNIR+DTL+HQ
Sbjct: 712  KYTHCELDMSFLLGLSCSLVPFANHDHARRVLYQSQKHSSQAIGFSTTNPNIRVDTLSHQ 771

Query: 1504 MYYPQRPLFRSVISDSLGEP---LGRNQVL---PKAEFFNGQNGIVAVNVHLGYNQEDSL 1343
            ++YPQ+PLFR++ SD LG+P   LG+N++    PKAEF+NGQN IVAVNVHLGYNQEDSL
Sbjct: 772  LHYPQKPLFRTMASDCLGKPDNSLGQNKISKIPPKAEFYNGQNAIVAVNVHLGYNQEDSL 831

Query: 1342 VMNRASLERGMFRTEHFRSYKAEVDNNESSEKRRKFEDVVSFGKIQSKIGRVDSLDDDGF 1163
            VMNRASL+RGMFR+EH RSYK+E+DN ESS+K+RK ED+V+F K+QSKIGRVDSLDDDGF
Sbjct: 832  VMNRASLQRGMFRSEHIRSYKSEIDNKESSDKKRKPEDIVNFAKLQSKIGRVDSLDDDGF 891

Query: 1162 PFIGANLHSGDIIIGRCAESGADHSVKLKHTERGMVQKVVLSANDDGKTFAVVSLRQVRS 983
            P++GANL SGDIIIG+ AESGAD+SVKLKHTERG VQKVVLS+ND+GK FAVVSLRQVRS
Sbjct: 892  PYVGANLQSGDIIIGKGAESGADNSVKLKHTERGYVQKVVLSSNDEGKNFAVVSLRQVRS 951

Query: 982  PCLGDKFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGK 803
            P LGDKFSSMHGQKGVLG+LESQENFPFT+QGIVPDIVINPHAFPSRQTPGQLLEAALGK
Sbjct: 952  PVLGDKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIVINPHAFPSRQTPGQLLEAALGK 1011

Query: 802  GIACGGTLKYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQ 623
            GIACGG L+ ATPFST SV+AITEQLHRAGFSRWGNERVYNGRTGEM+R+LIFMGPTFYQ
Sbjct: 1012 GIACGGILRQATPFSTPSVDAITEQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQ 1071

Query: 622  RLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFT 443
            RL HMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANL+ERLFT
Sbjct: 1072 RLHHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLYERLFT 1131

Query: 442  LSDSSQMHVCRKCKNIANVIQRAVPGGKKIRGPYCRFCESVDEIVKINVPYGAKLLCQEL 263
            LSDSSQ+H+C KCKN+ANVI R V GG+KIRGPYCR CES D+IV  +VPYGAKLLCQEL
Sbjct: 1132 LSDSSQIHICSKCKNVANVILRPVSGGRKIRGPYCRHCESADDIVVAHVPYGAKLLCQEL 1191

Query: 262  FSMGISLRFETELC 221
            FSMGI+L+FET+LC
Sbjct: 1192 FSMGINLKFETQLC 1205


>ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1217

 Score =  896 bits (2316), Expect = 0.0
 Identities = 441/552 (79%), Positives = 489/552 (88%), Gaps = 5/552 (0%)
 Frame = -1

Query: 1861 RPLLVVENLKKIKILKGDNFSFETLLDKXXXXXXXXXXXEDCRIAWGIKFLF--EDKGKD 1688
            RPLLVV NLKKIK LKG ++ F++LLD            EDCR AWG++++   + +   
Sbjct: 667  RPLLVVSNLKKIKALKGGDYGFQSLLDNGIIEFIGPEEEEDCRTAWGVEYILKADKENPP 726

Query: 1687 TKYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRLDTLTH 1508
             KYTHCELDMSFLLG+SCGIIPFANHDHARRVLYQSEKHS QAIG+S+ NPN R+DT TH
Sbjct: 727  AKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNNRVDTNTH 786

Query: 1507 QMYYPQRPLFRSVISDSLGEPLG---RNQVLPKAEFFNGQNGIVAVNVHLGYNQEDSLVM 1337
            Q+YYPQRPLFR++++DSLG+P     +  +LP+ E+FNGQ  IVAVNVHLGYNQEDSLVM
Sbjct: 787  QLYYPQRPLFRTMLADSLGKPKCTQYQKGMLPRPEYFNGQCAIVAVNVHLGYNQEDSLVM 846

Query: 1336 NRASLERGMFRTEHFRSYKAEVDNNESSEKRRKFEDVVSFGKIQSKIGRVDSLDDDGFPF 1157
            NRASLERGMFR+EH RSYKAEVDN E+  K+ K ED V+FGK QSKIGRVDSLDDDGFPF
Sbjct: 847  NRASLERGMFRSEHVRSYKAEVDNKEAMAKKLKIEDSVNFGKTQSKIGRVDSLDDDGFPF 906

Query: 1156 IGANLHSGDIIIGRCAESGADHSVKLKHTERGMVQKVVLSANDDGKTFAVVSLRQVRSPC 977
            IGANL SGDIIIG+ AESGADHSVKLKHTERGMVQKV+LSAND+GK FAVVSLRQVRSPC
Sbjct: 907  IGANLQSGDIIIGKFAESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVSLRQVRSPC 966

Query: 976  LGDKFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGI 797
            LGDKFSSMHGQKGVLG+LESQENFPFT QGIVPDIVINPHAFPSRQTPGQLLEAALGKGI
Sbjct: 967  LGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGI 1026

Query: 796  ACGGTLKYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQRL 617
            A GG  KYATPFSTLSV+AI EQL   GF+RWGNERVYNGRTGEM+ +LIFMGPTFYQRL
Sbjct: 1027 ALGGGQKYATPFSTLSVDAIMEQLQGRGFTRWGNERVYNGRTGEMVHSLIFMGPTFYQRL 1086

Query: 616  IHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLS 437
            IHM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA+ANLHERLFTLS
Sbjct: 1087 IHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLS 1146

Query: 436  DSSQMHVCRKCKNIANVIQRAVPGGKKIRGPYCRFCESVDEIVKINVPYGAKLLCQELFS 257
            DSSQMH+C KCKN+ANVIQR V GG K+RGP+CRFCESV++IVK+NVPYGAKLLCQELFS
Sbjct: 1147 DSSQMHICGKCKNMANVIQRTVQGG-KVRGPFCRFCESVEDIVKVNVPYGAKLLCQELFS 1205

Query: 256  MGISLRFETELC 221
            MGISL+F+TE+C
Sbjct: 1206 MGISLKFDTEIC 1217


>ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a [Solanum
            lycopersicum]
          Length = 1217

 Score =  895 bits (2313), Expect = 0.0
 Identities = 440/552 (79%), Positives = 489/552 (88%), Gaps = 5/552 (0%)
 Frame = -1

Query: 1861 RPLLVVENLKKIKILKGDNFSFETLLDKXXXXXXXXXXXEDCRIAWGIKFLF--EDKGKD 1688
            RPLLVV NLKKIK LKG ++ F++LLD            EDCR AWG++++   + +   
Sbjct: 667  RPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEYILKADKENPP 726

Query: 1687 TKYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRLDTLTH 1508
             KYTHCELDMSFLLG+SCGIIPFANHDHARRVLYQSEKHS QAIG+S+ NPN R+DT TH
Sbjct: 727  AKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNNRVDTNTH 786

Query: 1507 QMYYPQRPLFRSVISDSLGEPLG---RNQVLPKAEFFNGQNGIVAVNVHLGYNQEDSLVM 1337
            Q+YYPQRPLFR++++DSLG+P     +  +LP+ E+FNGQ  IVAVNVHLGYNQEDSLVM
Sbjct: 787  QLYYPQRPLFRTMLADSLGKPKCAQYQKGMLPRPEYFNGQCAIVAVNVHLGYNQEDSLVM 846

Query: 1336 NRASLERGMFRTEHFRSYKAEVDNNESSEKRRKFEDVVSFGKIQSKIGRVDSLDDDGFPF 1157
            NRASLERGMFR+EH RSYKAEVDN E+  K+ K ED V+FGK QSKIGRVDSLDDDGFPF
Sbjct: 847  NRASLERGMFRSEHVRSYKAEVDNKEAMAKKLKIEDSVNFGKTQSKIGRVDSLDDDGFPF 906

Query: 1156 IGANLHSGDIIIGRCAESGADHSVKLKHTERGMVQKVVLSANDDGKTFAVVSLRQVRSPC 977
            IGANL SGDIIIG+ +ESGADHSVKLKHTERGMVQKV+LSAND+GK FAVVSLRQVRSPC
Sbjct: 907  IGANLQSGDIIIGKFSESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVSLRQVRSPC 966

Query: 976  LGDKFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGI 797
            LGDKFSSMHGQKGVLG+LESQENFPFT QGIVPDIVINPHAFPSRQTPGQLLEAALGKGI
Sbjct: 967  LGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGI 1026

Query: 796  ACGGTLKYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQRL 617
            A GG  KYATPFSTLSV+AI EQL   GF+RWGNERVYNGRTGEM+ +LIFMGPTFYQRL
Sbjct: 1027 ALGGGQKYATPFSTLSVDAIMEQLQGRGFTRWGNERVYNGRTGEMVHSLIFMGPTFYQRL 1086

Query: 616  IHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLS 437
            IHM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA+ANLHERLFTLS
Sbjct: 1087 IHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLS 1146

Query: 436  DSSQMHVCRKCKNIANVIQRAVPGGKKIRGPYCRFCESVDEIVKINVPYGAKLLCQELFS 257
            DSSQMH+C KCKN+ANVIQR V GG K+RGP+CRFCESV++IVK+NVPYGAKLLCQELFS
Sbjct: 1147 DSSQMHICGKCKNMANVIQRTVQGG-KVRGPFCRFCESVEDIVKVNVPYGAKLLCQELFS 1205

Query: 256  MGISLRFETELC 221
            MGISL+F+TE+C
Sbjct: 1206 MGISLKFDTEIC 1217


>ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1219

 Score =  889 bits (2297), Expect = 0.0
 Identities = 441/556 (79%), Positives = 490/556 (88%), Gaps = 9/556 (1%)
 Frame = -1

Query: 1861 RPLLVVENLKKIKILK----GDNFSFETLLDKXXXXXXXXXXXEDCRIAWGIKFLF--ED 1700
            RPLLVV NLK IK LK    G ++ F+TLLDK           EDCR AWG+++L   + 
Sbjct: 665  RPLLVVSNLKNIKSLKDGMKGGDYGFQTLLDKGIIELIGPEEEEDCRTAWGVEYLLKADK 724

Query: 1699 KGKDTKYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRLD 1520
            +     YTHCELDMSFLLG+SCG+IPFANHDHARRVLYQSEKHS QAIG+S+ NPN R+D
Sbjct: 725  ENPPVNYTHCELDMSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNARVD 784

Query: 1519 TLTHQMYYPQRPLFRSVISDSLGEP-LGRNQ--VLPKAEFFNGQNGIVAVNVHLGYNQED 1349
            T THQ+YYPQRPLF +++SDSLG+P  GR+Q  +L + E++NGQ  IVAVNVHLGYNQED
Sbjct: 785  TNTHQLYYPQRPLFGTMLSDSLGKPKCGRHQKGMLSRPEYYNGQCAIVAVNVHLGYNQED 844

Query: 1348 SLVMNRASLERGMFRTEHFRSYKAEVDNNESSEKRRKFEDVVSFGKIQSKIGRVDSLDDD 1169
            S+VMNRASLERGMFR+EH RSYKAEVDN E+  K+ K ED V+FGK QSKIGRVDSLDDD
Sbjct: 845  SVVMNRASLERGMFRSEHVRSYKAEVDNKEAMGKKSKVEDSVNFGKTQSKIGRVDSLDDD 904

Query: 1168 GFPFIGANLHSGDIIIGRCAESGADHSVKLKHTERGMVQKVVLSANDDGKTFAVVSLRQV 989
            GFPFIGANL SGDIIIG+ AESGADHSVK+KHTERGMVQKV+LSANDDGK FAVVSLRQV
Sbjct: 905  GFPFIGANLQSGDIIIGKYAESGADHSVKMKHTERGMVQKVLLSANDDGKNFAVVSLRQV 964

Query: 988  RSPCLGDKFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAAL 809
            RSPCLGDKFSSMHGQKGVLGYLESQENFPFT QGIVPDIVINPHAFPSRQTPGQLLEAAL
Sbjct: 965  RSPCLGDKFSSMHGQKGVLGYLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQLLEAAL 1024

Query: 808  GKGIACGGTLKYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTF 629
            GKGIA GG  KYATPFS LSV+AI +QLH  GFSRWG+ERVYNGRTGEM+ +LIFMGPTF
Sbjct: 1025 GKGIALGGGEKYATPFSALSVDAILKQLHGRGFSRWGSERVYNGRTGEMVHSLIFMGPTF 1084

Query: 628  YQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERL 449
            YQRLIHM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA+ANLHERL
Sbjct: 1085 YQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERL 1144

Query: 448  FTLSDSSQMHVCRKCKNIANVIQRAVPGGKKIRGPYCRFCESVDEIVKINVPYGAKLLCQ 269
            FTLSDSSQMH+C KCKN+ANVIQR+ PGG KIRGP+CRFCESV++IVK++VPYGAKLLCQ
Sbjct: 1145 FTLSDSSQMHICGKCKNMANVIQRSAPGG-KIRGPFCRFCESVEDIVKVDVPYGAKLLCQ 1203

Query: 268  ELFSMGISLRFETELC 221
            ELFSMGISL+F+TE+C
Sbjct: 1204 ELFSMGISLKFDTEIC 1219


>gb|EXB86677.1| DNA-directed RNA polymerase D subunit 2a [Morus notabilis]
          Length = 1196

 Score =  888 bits (2294), Expect = 0.0
 Identities = 432/553 (78%), Positives = 488/553 (88%), Gaps = 6/553 (1%)
 Frame = -1

Query: 1861 RPLLVVENLKKIKILKGDNFSFETLLDKXXXXXXXXXXXEDCRIAWGIKFLF-EDKGKDT 1685
            RPLLVVENL +IK  K   ++F +LLDK           EDCR AWGIK+LF ED GK  
Sbjct: 644  RPLLVVENLNRIKPSKEGKYTFHSLLDKGIIELIGAEEEEDCRTAWGIKYLFMEDGGKPV 703

Query: 1684 KYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRLDTLTHQ 1505
             YTHCELDMSFLL VSCGIIPFANHDHARRVLYQ++KHS QAIG+ +TNP+IR+DTL+HQ
Sbjct: 704  NYTHCELDMSFLLSVSCGIIPFANHDHARRVLYQAQKHSQQAIGFPTTNPDIRVDTLSHQ 763

Query: 1504 MYYPQRPLFRSVISDSLGE---PLGRNQVLPKAEFFNGQNGIVAVNVHLGYNQEDSLVMN 1334
            ++YPQRPLF+++ SD LG+      +N  +PK E FNGQN IVAVNVHLGYNQEDS+VMN
Sbjct: 764  LHYPQRPLFQTMTSDCLGKRGYAPSQNGFIPKFECFNGQNAIVAVNVHLGYNQEDSIVMN 823

Query: 1333 RASLERGMFRTEHFRSYKAEVDNNESSEKRRKFEDVVSFGKIQSKIGRVDSLDDDGFPFI 1154
            RASLERGMFR+EH RSYKA+VDN ES++KRRK +D  +F KI SK GRVDSLDDDGFPFI
Sbjct: 824  RASLERGMFRSEHIRSYKADVDNKESTDKRRKPDDCFNFAKIPSKNGRVDSLDDDGFPFI 883

Query: 1153 GANLHSGDIIIGRCAESGADHSVKLKHTERGMVQKVVLSANDDGKTFAVVSLRQVRSPCL 974
            GANL SGDI+IGRCAESGADHS+KLKHTE+GMVQKVVLS+NDDGK FAVVSLRQVR P L
Sbjct: 884  GANLQSGDIVIGRCAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNFAVVSLRQVRQPIL 943

Query: 973  GDKFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA 794
            GDKFSSMHGQKGVLGYLESQENFPFT QGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA
Sbjct: 944  GDKFSSMHGQKGVLGYLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA 1003

Query: 793  C--GGTLKYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQR 620
               G  L++ATPFST SV+AITEQLH+AGFSRWGNERVYNGRTGEM+R+LIFMGPTFYQR
Sbjct: 1004 LAKGIPLRHATPFSTPSVDAITEQLHKAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQR 1063

Query: 619  LIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTL 440
            L+HMSEDKVKFRNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGASANLHERLFTL
Sbjct: 1064 LVHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTL 1123

Query: 439  SDSSQMHVCRKCKNIANVIQRAVPGGKKIRGPYCRFCESVDEIVKINVPYGAKLLCQELF 260
            SDSSQMH+C +C N+AN+IQR++ GG+K+RGPYCR C+S D+IV++NVPYGAKLLCQELF
Sbjct: 1124 SDSSQMHICHRCHNVANIIQRSLMGGRKVRGPYCRICKSADDIVRVNVPYGAKLLCQELF 1183

Query: 259  SMGISLRFETELC 221
            +MGI+L+FET +C
Sbjct: 1184 TMGINLKFETRIC 1196