BLASTX nr result

ID: Achyranthes22_contig00070688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00070688
         (296 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592563.1| Transcription factor MADS box [Medicago trun...    45   5e-07
gb|ABK28380.1| unknown [Arabidopsis thaliana]                          45   2e-06
ref|NP_171660.1| protein agamous-like 28 [Arabidopsis thaliana] ...    45   2e-06
emb|CAA73304.1| MADS-box protein [Arabidopsis thaliana]                45   2e-06

>ref|XP_003592563.1| Transcription factor MADS box [Medicago truncatula]
           gi|355481611|gb|AES62814.1| Transcription factor MADS
           box [Medicago truncatula]
          Length = 228

 Score = 45.1 bits (105), Expect(2) = 5e-07
 Identities = 20/29 (68%), Positives = 23/29 (79%)
 Frame = +1

Query: 130 IINKTSKQVTFSKRRNGLFKNVSELCTLC 216
           I N+++ QVTFSK  NGLFK  SELCTLC
Sbjct: 18  ISNESNLQVTFSKHHNGLFKKASELCTLC 46



 Score = 34.3 bits (77), Expect(2) = 5e-07
 Identities = 13/26 (50%), Positives = 20/26 (76%)
 Frame = +3

Query: 219 AEVGVITFSGAGKLSSFGHPSADAII 296
           A+V ++ FS +GK+ SFGHP+ D +I
Sbjct: 48  ADVALVVFSPSGKVFSFGHPNLDTVI 73


>gb|ABK28380.1| unknown [Arabidopsis thaliana]
          Length = 248

 Score = 45.1 bits (105), Expect(2) = 2e-06
 Identities = 20/27 (74%), Positives = 24/27 (88%)
 Frame = +1

Query: 136 NKTSKQVTFSKRRNGLFKNVSELCTLC 216
           N+++ QVTFSKRR+GLFK  SELCTLC
Sbjct: 18  NESNLQVTFSKRRSGLFKKGSELCTLC 44



 Score = 32.3 bits (72), Expect(2) = 2e-06
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +3

Query: 219 AEVGVITFSGAGKLSSFGHPSADAII 296
           AE+ +I FS +GK  SFGHP+ + ++
Sbjct: 46  AEIAIIVFSPSGKAYSFGHPNVNKLL 71


>ref|NP_171660.1| protein agamous-like 28 [Arabidopsis thaliana]
           gi|8920589|gb|AAF81311.1|AC061957_7 Contains strong
           similarity (practically identical) to a MADS-box protein
           from Arabidopsis thaliana gi|2505875 and contains a
           SRF-type transcription factor (DNA-binding and
           dimerisation) PF|00319 domain [Arabidopsis thaliana]
           gi|32402426|gb|AAN52795.1| MADS-box protein AGL28
           [Arabidopsis thaliana] gi|91805725|gb|ABE65591.1|
           MADS-box protein [Arabidopsis thaliana]
           gi|225897852|dbj|BAH30258.1| hypothetical protein
           [Arabidopsis thaliana] gi|332189179|gb|AEE27300.1|
           protein agamous-like 28 [Arabidopsis thaliana]
          Length = 247

 Score = 45.1 bits (105), Expect(2) = 2e-06
 Identities = 20/27 (74%), Positives = 24/27 (88%)
 Frame = +1

Query: 136 NKTSKQVTFSKRRNGLFKNVSELCTLC 216
           N+++ QVTFSKRR+GLFK  SELCTLC
Sbjct: 18  NESNLQVTFSKRRSGLFKKGSELCTLC 44



 Score = 32.3 bits (72), Expect(2) = 2e-06
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +3

Query: 219 AEVGVITFSGAGKLSSFGHPSADAII 296
           AE+ +I FS +GK  SFGHP+ + ++
Sbjct: 46  AEIAIIVFSPSGKAYSFGHPNVNKLL 71


>emb|CAA73304.1| MADS-box protein [Arabidopsis thaliana]
          Length = 244

 Score = 45.1 bits (105), Expect(2) = 2e-06
 Identities = 20/27 (74%), Positives = 24/27 (88%)
 Frame = +1

Query: 136 NKTSKQVTFSKRRNGLFKNVSELCTLC 216
           N+++ QVTFSKRR+GLFK  SELCTLC
Sbjct: 18  NESNLQVTFSKRRSGLFKKGSELCTLC 44



 Score = 32.3 bits (72), Expect(2) = 2e-06
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +3

Query: 219 AEVGVITFSGAGKLSSFGHPSADAII 296
           AE+ +I FS +GK  SFGHP+ + ++
Sbjct: 46  AEIAIIVFSPSGKAYSFGHPNVNKLL 71


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