BLASTX nr result

ID: Achyranthes22_contig00070163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00070163
         (365 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ02990.1| hypothetical protein PRUPE_ppa006538mg [Prunus pe...    57   3e-06
ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumi...    57   3e-06
ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumi...    57   3e-06
ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protei...    56   4e-06

>gb|EMJ02990.1| hypothetical protein PRUPE_ppa006538mg [Prunus persica]
          Length = 406

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 40/104 (38%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
 Frame = +2

Query: 2   KKWVLLTSLGGRTIFLSKNS--SICASSLNGLKENCIYFSFKDIGKEFSEKKGGNIDDSV 175
           K+ V L SLG R +FL  +   S  AS L+G K NCI+F+       F    G       
Sbjct: 304 KRLVELKSLGDRVLFLGDDCTFSASASELSGCKGNCIFFT-----DNFFYTSGE------ 352

Query: 176 DYYDEDGVKTNEIGVFNYDKGKFGSFEEDFEDSKLFCWPPPSWV 307
              DE   K  +IGVF+ D G      +  E SKLF WPPP W+
Sbjct: 353 ---DEGVFKGRDIGVFDLDDGSIAPLSDYPEYSKLF-WPPPDWI 392


>ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
          Length = 458

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
 Frame = +2

Query: 2   KKWVLLTSLGGRTIFLSKNSSICASS--LNGLKENCIYFSFKDIGKEFSEKKGGNIDDSV 175
           KKW ++  LG   +FL +N S  AS+  ++G K NCI+F+             G +  +V
Sbjct: 295 KKWTVVCDLGNTMLFLGENCSFSASASGVSGCKGNCIFFT------------DGFLCPNV 342

Query: 176 DYYDEDGVKTNEIGVFNYDKGKFGSFEEDFEDSKLFCWPPPSWV 307
           D  ++D  K ++I +F+ + G      +    S+LF WPPPSW+
Sbjct: 343 D--EDDVFKGSDIAIFDLEFGTISPLSDSPMYSRLF-WPPPSWI 383


>ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
          Length = 404

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
 Frame = +2

Query: 2   KKWVLLTSLGGRTIFLSKNSSICASS--LNGLKENCIYFSFKDIGKEFSEKKGGNIDDSV 175
           KKW ++  LG   +FL +N S  AS+  ++G K NCI+F+             G +  +V
Sbjct: 295 KKWTVVCDLGNTMLFLGENCSFSASASGVSGCKGNCIFFT------------DGFLCPNV 342

Query: 176 DYYDEDGVKTNEIGVFNYDKGKFGSFEEDFEDSKLFCWPPPSWV 307
           D  ++D  K ++I +F+ + G      +    S+LF WPPPSW+
Sbjct: 343 D--EDDVFKGSDIAIFDLEFGTISPLSDSPMYSRLF-WPPPSWI 383


>ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP23-like [Vitis
           vinifera]
          Length = 387

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 37/105 (35%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
 Frame = +2

Query: 2   KKWVLLTSLGGRTIFLSKNSSICA--SSLNGLKENCIYFSFKDIGKEFSEKKGGNIDDSV 175
           +KWV + SLG R +FL  +SS  A  S   G K N I F+              NI    
Sbjct: 292 QKWVEIESLGDRLLFLGDDSSFSARASDFYGCKGNSICFT--------------NISFFS 337

Query: 176 DYYDEDGVKTNEIGVFNYDKGKFGSFEEDFEDSKLFCWPPPSWVN 310
           D  ++D  ++  IGVF+ D G  G        SK   WPPP+WV+
Sbjct: 338 DAEEDDASRSGTIGVFDLDSGSIGPLSSYANYSKTI-WPPPAWVS 381


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