BLASTX nr result

ID: Achyranthes22_contig00069395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00069395
         (391 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274344.1| PREDICTED: pentatricopeptide repeat-containi...    72   1e-10
ref|XP_002533676.1| pentatricopeptide repeat-containing protein,...    72   1e-10

>ref|XP_002274344.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 739

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 44/117 (37%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
 Frame = +1

Query: 49  SFKFPLLYSHNLRTSPFCTLS---SSYFHFCRDLRTLKILHAHRIVSLQHQTPPIMLELV 219
           SF   L  +H+L  S + T S   SS  H C +L+ LK +HA  IVS   Q   +  +L+
Sbjct: 32  SFSSVLFRTHHLN-SHYLTCSFPYSSLLHSCNNLQALKRIHASLIVSSGFQPLSVASKLI 90

Query: 220 HLYMKFGDFXXXXXXXXXXQEHNTKVWNLLIKNALDLGKFEVGIFIYRKMRELGVYH 390
            LY +  DF          +E NT +WN +IK+ +D G F   +  Y +MRELGV H
Sbjct: 91  TLYSQLNDFRSAFSICNSFEEPNTVIWNSIIKSHVDSGLFGYALLQYGRMRELGVAH 147


>ref|XP_002533676.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526427|gb|EEF28706.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 726

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
 Frame = +1

Query: 34  LHFSPSFKFP--LLYSHNLRTSPFCTLSSSYFHFCRDLRTLKILHAHRIVS--LQHQTPP 201
           LHF  + K    LL+SH L+T    +L S   H C+DLRTLK +HA  +VS         
Sbjct: 5   LHFFTTTKHHPLLLHSHYLKTHHLSSLFS-LLHSCKDLRTLKQIHASLLVSTGFNESISF 63

Query: 202 IMLELVHLYMKFGDFXXXXXXXXXXQEHNTKVWNLLIKNALDLGKFEVGIFIYRKMRELG 381
              +L+  Y KF D           QE NT  WNL+++  LD G     + +Y+KMRE G
Sbjct: 64  PSTKLISFYSKFNDLESAISVFSLLQEPNTLSWNLIMRTHLDFGLVTEALLLYKKMRESG 123

Query: 382 V 384
           V
Sbjct: 124 V 124


Top