BLASTX nr result
ID: Achyranthes22_contig00069219
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes22_contig00069219
(259 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 105 8e-21
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 77 3e-12
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 75 1e-11
gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-... 73 3e-11
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 73 5e-11
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 73 5e-11
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 72 1e-10
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 72 1e-10
gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidop... 72 1e-10
emb|CCI55401.1| PH01B015M02.2 [Phyllostachys edulis] 71 1e-10
ref|XP_003606104.1| Aspartyl-tRNA synthetase [Medicago truncatul... 71 1e-10
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana] 71 1e-10
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi... 71 2e-10
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 70 2e-10
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 70 2e-10
emb|CAH66031.1| H0515C11.7 [Oryza sativa Indica Group] 70 3e-10
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 70 3e-10
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 69 5e-10
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 69 5e-10
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group] 69 5e-10
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 105 bits (261), Expect = 8e-21
Identities = 47/62 (75%), Positives = 53/62 (85%)
Frame = +1
Query: 1 SKDQVHHDRTKHIDVRYHFMTTEKRIKVKKIDTDENPTDMFTKSVPHSKFQLCLDLLNIS 180
+KDQVHH+RTKHIDVRYHF+ +EKRIKVKK+ T +NP DMFTK VP SKFQ CLDLLNI
Sbjct: 1246 AKDQVHHERTKHIDVRYHFLRSEKRIKVKKVGTADNPADMFTKPVPQSKFQHCLDLLNIR 1305
Query: 181 DC 186
C
Sbjct: 1306 SC 1307
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 76.6 bits (187), Expect = 3e-12
Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 3/71 (4%)
Frame = +1
Query: 1 SKDQVHHDRTKHIDVRYHF---MTTEKRIKVKKIDTDENPTDMFTKSVPHSKFQLCLDLL 171
+KDQ+ H+RTKHIDVRYHF + E +K+ KI +NP DM TK VP +KF+LC L+
Sbjct: 1476 TKDQMFHERTKHIDVRYHFIRGLIAEGDVKICKISIHDNPADMMTKPVPATKFELCSSLV 1535
Query: 172 NISDCYMPCDG 204
+SD +P +G
Sbjct: 1536 ILSDANVPGEG 1546
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 74.7 bits (182), Expect = 1e-11
Identities = 35/63 (55%), Positives = 46/63 (73%), Gaps = 3/63 (4%)
Frame = +1
Query: 1 SKDQVHHDRTKHIDVRYHFMT---TEKRIKVKKIDTDENPTDMFTKSVPHSKFQLCLDLL 171
+KDQ+ H+RTKHIDVRYHF+ TE +KV KI T +NP DM TK VP +KF+LC L+
Sbjct: 1075 TKDQMFHERTKHIDVRYHFIRSVITEGDVKVCKISTHDNPADMMTKPVPATKFELCSSLV 1134
Query: 172 NIS 180
++
Sbjct: 1135 GVT 1137
>gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549746|gb|ABA92543.1|
retrotransposon protein, putative, Ty1-copia subclass,
expressed [Oryza sativa Japonica Group]
Length = 1170
Score = 73.2 bits (178), Expect = 3e-11
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 3/63 (4%)
Frame = +1
Query: 1 SKDQVHHDRTKHIDVRYHFMT---TEKRIKVKKIDTDENPTDMFTKSVPHSKFQLCLDLL 171
+KDQ+ H+RTKHID+RYHF+ TE +KV KI T +NP DM TK VP +KF+LC L+
Sbjct: 1107 TKDQMFHERTKHIDLRYHFIRGVITEGEVKVCKISTHDNPADMMTKLVPATKFELCSSLV 1166
Query: 172 NIS 180
++
Sbjct: 1167 AVT 1169
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 72.8 bits (177), Expect = 5e-11
Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 3/63 (4%)
Frame = +1
Query: 1 SKDQVHHDRTKHIDVRYHFMT---TEKRIKVKKIDTDENPTDMFTKSVPHSKFQLCLDLL 171
+KDQ+ H+RTKHIDVRYHF+ E +KV KI T +NP DM TK VP +KF+LC L+
Sbjct: 1118 TKDQMFHERTKHIDVRYHFIRGVIAEGDVKVCKISTHDNPADMMTKPVPATKFELCSSLV 1177
Query: 172 NIS 180
++
Sbjct: 1178 GVT 1180
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 72.8 bits (177), Expect = 5e-11
Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 3/63 (4%)
Frame = +1
Query: 1 SKDQVHHDRTKHIDVRYHFMT---TEKRIKVKKIDTDENPTDMFTKSVPHSKFQLCLDLL 171
+KDQ+ H+RTKHIDVRYHF+ E +KV KI T +NP DM TK VP +KF+LC L+
Sbjct: 1148 TKDQMFHERTKHIDVRYHFIRGVIAEGDVKVCKISTHDNPADMMTKPVPTTKFELCSSLV 1207
Query: 172 NIS 180
++
Sbjct: 1208 GVT 1210
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 71.6 bits (174), Expect = 1e-10
Identities = 33/62 (53%), Positives = 46/62 (74%), Gaps = 3/62 (4%)
Frame = +1
Query: 1 SKDQVHHDRTKHIDVRYHF---MTTEKRIKVKKIDTDENPTDMFTKSVPHSKFQLCLDLL 171
SK+ ++H RTKHIDVRYH+ M ++ +KV KI T+ENP DM TK VP +KF+LC +L+
Sbjct: 1264 SKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFELCKELV 1323
Query: 172 NI 177
+
Sbjct: 1324 GM 1325
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 71.6 bits (174), Expect = 1e-10
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 3/63 (4%)
Frame = +1
Query: 1 SKDQVHHDRTKHIDVRYHFMT---TEKRIKVKKIDTDENPTDMFTKSVPHSKFQLCLDLL 171
+KDQ+ H+RTKHID+RYHF+ E +KV KI T +NP DM TK VP +KF+LC L+
Sbjct: 1178 TKDQMFHERTKHIDLRYHFIRGVIAEGDVKVCKISTHDNPVDMMTKPVPATKFELCSSLV 1237
Query: 172 NIS 180
++
Sbjct: 1238 GVT 1240
>gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1137
Score = 71.6 bits (174), Expect = 1e-10
Identities = 33/63 (52%), Positives = 47/63 (74%), Gaps = 3/63 (4%)
Frame = +1
Query: 1 SKDQVHHDRTKHIDVRYHF---MTTEKRIKVKKIDTDENPTDMFTKSVPHSKFQLCLDLL 171
+K+ V+H+RTKHIDV+YHF + ++V KIDT++NP D+FTK +P SKFQ L+LL
Sbjct: 1073 AKNAVYHERTKHIDVKYHFIRDLVNNGEVQVLKIDTEDNPADIFTKVLPVSKFQDALELL 1132
Query: 172 NIS 180
+S
Sbjct: 1133 RVS 1135
>emb|CCI55401.1| PH01B015M02.2 [Phyllostachys edulis]
Length = 1655
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/62 (51%), Positives = 47/62 (75%), Gaps = 3/62 (4%)
Frame = +1
Query: 1 SKDQVHHDRTKHIDVRYHFMT---TEKRIKVKKIDTDENPTDMFTKSVPHSKFQLCLDLL 171
+KDQ+ H+RTKHIDV+YH++ ++ +KV KI T +NP DM TKSVP +KF+LC +L+
Sbjct: 1592 TKDQMFHERTKHIDVKYHYIQDVISQGNVKVCKISTYDNPADMMTKSVPITKFELCSNLV 1651
Query: 172 NI 177
+
Sbjct: 1652 GV 1653
>ref|XP_003606104.1| Aspartyl-tRNA synthetase [Medicago truncatula]
gi|355507159|gb|AES88301.1| Aspartyl-tRNA synthetase
[Medicago truncatula]
Length = 803
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/57 (56%), Positives = 44/57 (77%), Gaps = 3/57 (5%)
Frame = +1
Query: 10 QVHHDRTKHIDVRYHF---MTTEKRIKVKKIDTDENPTDMFTKSVPHSKFQLCLDLL 171
QV+H+RTKHID+R HF M K I V+K+ ++ENP D+FTKS+P S+F+ CLDL+
Sbjct: 98 QVYHERTKHIDIRLHFVRDMIESKEIVVEKVASEENPADVFTKSLPRSRFKHCLDLI 154
>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1363
Score = 71.2 bits (173), Expect = 1e-10
Identities = 31/62 (50%), Positives = 46/62 (74%), Gaps = 3/62 (4%)
Frame = +1
Query: 1 SKDQVHHDRTKHIDVRYHFMT---TEKRIKVKKIDTDENPTDMFTKSVPHSKFQLCLDLL 171
SK+ VHH+RTKHIDV++HF+ + +++V KI T++NP D+FTK +P +KFQ LD L
Sbjct: 1299 SKNNVHHERTKHIDVKFHFIREIIADGKVEVSKISTEKNPADIFTKVLPVNKFQTALDFL 1358
Query: 172 NI 177
+
Sbjct: 1359 RV 1360
>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1342
Score = 70.9 bits (172), Expect = 2e-10
Identities = 36/63 (57%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
Frame = +1
Query: 1 SKDQVHHDRTKHIDVRYHFM---TTEKRIKVKKIDTDENPTDMFTKSVPHSKFQLCLDLL 171
SK+ VHH+RTKHIDVRYHF+ + I+V KI T NP D+FTK+VP SK Q L LL
Sbjct: 1278 SKNSVHHERTKHIDVRYHFIREKIADGEIQVVKISTTWNPADIFTKTVPVSKLQEALKLL 1337
Query: 172 NIS 180
+S
Sbjct: 1338 RVS 1340
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 70.5 bits (171), Expect = 2e-10
Identities = 31/62 (50%), Positives = 45/62 (72%), Gaps = 3/62 (4%)
Frame = +1
Query: 1 SKDQVHHDRTKHIDVRYHFMTT---EKRIKVKKIDTDENPTDMFTKSVPHSKFQLCLDLL 171
+KDQ+ H+RTKHID++YHF+ E ++KV KI T +NP DM TK +P +KF+LC L+
Sbjct: 1270 TKDQMFHERTKHIDIKYHFVRDVIEEGKLKVCKISTHDNPADMMTKPIPVAKFELCSSLV 1329
Query: 172 NI 177
+
Sbjct: 1330 GL 1331
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 70.5 bits (171), Expect = 2e-10
Identities = 31/62 (50%), Positives = 45/62 (72%), Gaps = 3/62 (4%)
Frame = +1
Query: 1 SKDQVHHDRTKHIDVRYHFMTT---EKRIKVKKIDTDENPTDMFTKSVPHSKFQLCLDLL 171
+KDQ+ H+RTKHID++YHF+ E ++KV KI T +NP DM TK +P +KF+LC L+
Sbjct: 1270 TKDQMFHERTKHIDIKYHFVRDVIEEGKLKVCKISTHDNPADMMTKPIPVAKFELCSSLV 1329
Query: 172 NI 177
+
Sbjct: 1330 GL 1331
>emb|CAH66031.1| H0515C11.7 [Oryza sativa Indica Group]
Length = 293
Score = 70.1 bits (170), Expect = 3e-10
Identities = 31/62 (50%), Positives = 45/62 (72%), Gaps = 3/62 (4%)
Frame = +1
Query: 1 SKDQVHHDRTKHIDVRYHFM---TTEKRIKVKKIDTDENPTDMFTKSVPHSKFQLCLDLL 171
+KDQ+ H+RTKHID++YH++ + ++KV KI T +NP DM TK VP +KF+LC L+
Sbjct: 230 TKDQMFHERTKHIDIKYHYVRDVVAQGKLKVCKISTHDNPADMMTKPVPVAKFELCSSLV 289
Query: 172 NI 177
I
Sbjct: 290 GI 291
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1175
Score = 70.1 bits (170), Expect = 3e-10
Identities = 31/62 (50%), Positives = 45/62 (72%), Gaps = 3/62 (4%)
Frame = +1
Query: 1 SKDQVHHDRTKHIDVRYHFM---TTEKRIKVKKIDTDENPTDMFTKSVPHSKFQLCLDLL 171
+KDQ+ H+RTKHID++YH++ + ++KV KI T +NP DM TK VP +KF+LC L+
Sbjct: 1112 TKDQMFHERTKHIDIKYHYVRDVVAQGKLKVCKISTHDNPVDMMTKHVPVAKFELCSSLV 1171
Query: 172 NI 177
I
Sbjct: 1172 GI 1173
>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
Length = 944
Score = 69.3 bits (168), Expect = 5e-10
Identities = 32/62 (51%), Positives = 44/62 (70%), Gaps = 3/62 (4%)
Frame = +1
Query: 1 SKDQVHHDRTKHIDVRYHFMT---TEKRIKVKKIDTDENPTDMFTKSVPHSKFQLCLDLL 171
++DQ+ H+RTKHIDVRYHF+ E +KV KI T +NP DM K+VP +KF+LC L+
Sbjct: 881 TEDQMFHERTKHIDVRYHFIRGVIAEGDVKVCKISTHDNPADMMIKAVPATKFELCSSLV 940
Query: 172 NI 177
+
Sbjct: 941 GV 942
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 69.3 bits (168), Expect = 5e-10
Identities = 31/62 (50%), Positives = 45/62 (72%), Gaps = 3/62 (4%)
Frame = +1
Query: 1 SKDQVHHDRTKHIDVRYHFMTT---EKRIKVKKIDTDENPTDMFTKSVPHSKFQLCLDLL 171
+KDQ+ H+RTKHID++YHF+ E ++KV KI T +NP DM TK +P +KF+LC L+
Sbjct: 1272 TKDQMFHERTKHIDIKYHFVRDVIEEGKLKVCKICTHDNPADMMTKPIPVAKFELCSSLV 1331
Query: 172 NI 177
+
Sbjct: 1332 GL 1333
>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
Length = 944
Score = 69.3 bits (168), Expect = 5e-10
Identities = 32/62 (51%), Positives = 44/62 (70%), Gaps = 3/62 (4%)
Frame = +1
Query: 1 SKDQVHHDRTKHIDVRYHFMT---TEKRIKVKKIDTDENPTDMFTKSVPHSKFQLCLDLL 171
++DQ+ H+RTKHIDVRYHF+ E +KV KI T +NP DM K+VP +KF+LC L+
Sbjct: 881 TEDQMFHERTKHIDVRYHFIRGVIAEGDVKVCKISTHDNPADMMIKAVPATKFELCSSLV 940
Query: 172 NI 177
+
Sbjct: 941 GV 942