BLASTX nr result
ID: Achyranthes22_contig00068948
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Achyranthes22_contig00068948 (333 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera] 44 9e-07 gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat... 40 8e-06 >emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera] Length = 1173 Score = 43.5 bits (101), Expect(3) = 9e-07 Identities = 23/57 (40%), Positives = 31/57 (54%) Frame = +2 Query: 47 SKSPFEINYGINPFTPIDIFPLLIEDLXXXXXXXXXXXXYIQLANKHRRDL*CKPGD 217 S SPFEI YG NP TP+D+ PL + ++ Y+ ANK RR + + GD Sbjct: 1000 SFSPFEIVYGFNPLTPLDLLPLPVNEM--TSLDEKKNEQYVTKANKGRRQVLFESGD 1054 Score = 33.5 bits (75), Expect(3) = 9e-07 Identities = 15/28 (53%), Positives = 20/28 (71%) Frame = +3 Query: 231 IEKETFPSMRKTKLISRSDGSFEVLESI 314 + KE FP+ R++KL R DG F+VLE I Sbjct: 1060 MRKERFPTRRQSKLHPRGDGPFQVLERI 1087 Score = 20.4 bits (41), Expect(3) = 9e-07 Identities = 5/12 (41%), Positives = 9/12 (75%) Frame = +1 Query: 217 FVWIQLKKRHFP 252 +VW+ ++K FP Sbjct: 1055 WVWVHMRKERFP 1066 >gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas] Length = 1358 Score = 40.4 bits (93), Expect(2) = 8e-06 Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 17/72 (23%) Frame = +2 Query: 53 SPFEINYGINPFTPIDIFPLLIED-----------------LXXXXXXXXXXXXYIQLAN 181 SPFE+ YG NP TP+D+ PL + D Y Q AN Sbjct: 1133 SPFEVAYGFNPLTPLDLIPLHVNDKECVDAAKKAQGIREFHSKVRAQIEKKNEQYAQKAN 1192 Query: 182 KHRRDL*CKPGD 217 K R+ + KPGD Sbjct: 1193 KGRKAIIFKPGD 1204 Score = 34.7 bits (78), Expect(2) = 8e-06 Identities = 15/26 (57%), Positives = 19/26 (73%) Frame = +3 Query: 237 KETFPSMRKTKLISRSDGSFEVLESI 314 K FP+ RK+KL+ R DG F+VLE I Sbjct: 1212 KNRFPNQRKSKLMPRGDGPFQVLERI 1237