BLASTX nr result

ID: Achyranthes22_contig00068948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00068948
         (333 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera]    44   9e-07
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat...    40   8e-06

>emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera]
          Length = 1173

 Score = 43.5 bits (101), Expect(3) = 9e-07
 Identities = 23/57 (40%), Positives = 31/57 (54%)
 Frame = +2

Query: 47   SKSPFEINYGINPFTPIDIFPLLIEDLXXXXXXXXXXXXYIQLANKHRRDL*CKPGD 217
            S SPFEI YG NP TP+D+ PL + ++            Y+  ANK RR +  + GD
Sbjct: 1000 SFSPFEIVYGFNPLTPLDLLPLPVNEM--TSLDEKKNEQYVTKANKGRRQVLFESGD 1054



 Score = 33.5 bits (75), Expect(3) = 9e-07
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = +3

Query: 231  IEKETFPSMRKTKLISRSDGSFEVLESI 314
            + KE FP+ R++KL  R DG F+VLE I
Sbjct: 1060 MRKERFPTRRQSKLHPRGDGPFQVLERI 1087



 Score = 20.4 bits (41), Expect(3) = 9e-07
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = +1

Query: 217  FVWIQLKKRHFP 252
            +VW+ ++K  FP
Sbjct: 1055 WVWVHMRKERFP 1066


>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
          Length = 1358

 Score = 40.4 bits (93), Expect(2) = 8e-06
 Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 17/72 (23%)
 Frame = +2

Query: 53   SPFEINYGINPFTPIDIFPLLIED-----------------LXXXXXXXXXXXXYIQLAN 181
            SPFE+ YG NP TP+D+ PL + D                              Y Q AN
Sbjct: 1133 SPFEVAYGFNPLTPLDLIPLHVNDKECVDAAKKAQGIREFHSKVRAQIEKKNEQYAQKAN 1192

Query: 182  KHRRDL*CKPGD 217
            K R+ +  KPGD
Sbjct: 1193 KGRKAIIFKPGD 1204



 Score = 34.7 bits (78), Expect(2) = 8e-06
 Identities = 15/26 (57%), Positives = 19/26 (73%)
 Frame = +3

Query: 237  KETFPSMRKTKLISRSDGSFEVLESI 314
            K  FP+ RK+KL+ R DG F+VLE I
Sbjct: 1212 KNRFPNQRKSKLMPRGDGPFQVLERI 1237


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