BLASTX nr result
ID: Achyranthes22_contig00068921
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes22_contig00068921
(334 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 51 2e-14
emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera] 49 1e-13
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 48 2e-13
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera] 47 3e-13
ref|XP_003602418.1| Stomatin-like protein [Medicago truncatula] ... 45 2e-10
emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera] 40 2e-09
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] 40 2e-08
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi... 49 2e-08
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera] 46 3e-08
emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera] 37 4e-08
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera] 47 4e-08
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 40 7e-08
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 41 7e-08
ref|XP_006584292.1| PREDICTED: uncharacterized protein LOC102668... 41 7e-08
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 41 7e-08
gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|3860380... 40 7e-08
ref|XP_006586529.1| PREDICTED: uncharacterized mitochondrial pro... 39 8e-08
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 41 9e-08
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab... 43 1e-07
emb|CAN83978.1| hypothetical protein VITISV_007067 [Vitis vinifera] 39 3e-07
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 51.2 bits (121), Expect(3) = 2e-14
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = +3
Query: 27 LLSKFMHTAIVDNWEATLRVVWYRKRDLSQGXXXXXXXXXXXXGWCDSDW 176
+LS+FMH +++WEA LRVV Y K QG GWCDSDW
Sbjct: 900 ILSQFMHEPRIEHWEAALRVVRYLKGTPGQGILLRADSDLSLQGWCDSDW 949
Score = 37.4 bits (85), Expect(3) = 2e-14
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +2
Query: 185 PLT*RSISRWSCFLGSSLVLWKTKKQN 265
P+T RS+S W FLG S + WKTKKQ+
Sbjct: 953 PVTRRSLSGWLVFLGQSPISWKTKKQH 979
Score = 35.4 bits (80), Expect(3) = 2e-14
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +1
Query: 268 VSRYSSEVEYRSMASITFELKW 333
VSR S+E EYR+MA++T ELKW
Sbjct: 981 VSRSSAEAEYRAMAAVTCELKW 1002
>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
Length = 1461
Score = 48.5 bits (114), Expect(3) = 1e-13
Identities = 22/50 (44%), Positives = 27/50 (54%)
Frame = +3
Query: 27 LLSKFMHTAIVDNWEATLRVVWYRKRDLSQGXXXXXXXXXXXXGWCDSDW 176
+LS+FM +++WEA LRVV Y K QG GWCDSDW
Sbjct: 1262 ILSQFMQEPRIEHWEAALRVVHYLKGTPGQGILLRADSDLSLQGWCDSDW 1311
Score = 37.4 bits (85), Expect(3) = 1e-13
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +2
Query: 185 PLT*RSISRWSCFLGSSLVLWKTKKQN 265
P+T RS+S W FLG S + WKTKKQ+
Sbjct: 1315 PVTKRSLSGWLVFLGQSPISWKTKKQH 1341
Score = 35.4 bits (80), Expect(3) = 1e-13
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +1
Query: 268 VSRYSSEVEYRSMASITFELKW 333
VSR S+E EYR+MA++T ELKW
Sbjct: 1343 VSRSSAEAEYRAMAAVTCELKW 1364
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 47.8 bits (112), Expect(3) = 2e-13
Identities = 22/50 (44%), Positives = 27/50 (54%)
Frame = +3
Query: 27 LLSKFMHTAIVDNWEATLRVVWYRKRDLSQGXXXXXXXXXXXXGWCDSDW 176
+LS+FM +++WEA LRVV Y K QG GWCDSDW
Sbjct: 979 ILSQFMXEPRIEHWEAALRVVRYLKGTPGQGILLRADSDLSLQGWCDSDW 1028
Score = 37.4 bits (85), Expect(3) = 2e-13
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +2
Query: 185 PLT*RSISRWSCFLGSSLVLWKTKKQN 265
P+T RS+S W FLG S + WKTKKQ+
Sbjct: 1032 PVTRRSLSGWLVFLGQSPISWKTKKQH 1058
Score = 35.4 bits (80), Expect(3) = 2e-13
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +1
Query: 268 VSRYSSEVEYRSMASITFELKW 333
VSR S+E EYR+MA++T ELKW
Sbjct: 1060 VSRSSAEAEYRAMAAVTCELKW 1081
>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
Length = 1129
Score = 47.0 bits (110), Expect(3) = 3e-13
Identities = 21/50 (42%), Positives = 26/50 (52%)
Frame = +3
Query: 27 LLSKFMHTAIVDNWEATLRVVWYRKRDLSQGXXXXXXXXXXXXGWCDSDW 176
+LS+FM +++WE LRVV Y K QG GWCDSDW
Sbjct: 930 ILSQFMQEPRIEHWEVALRVVHYLKGTPGQGILLRADSDLSLQGWCDSDW 979
Score = 37.4 bits (85), Expect(3) = 3e-13
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +2
Query: 185 PLT*RSISRWSCFLGSSLVLWKTKKQN 265
P+T RS+S W FLG S + WKTKKQ+
Sbjct: 983 PVTRRSLSGWLVFLGQSHISWKTKKQH 1009
Score = 35.4 bits (80), Expect(3) = 3e-13
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +1
Query: 268 VSRYSSEVEYRSMASITFELKW 333
VSR S+E EYR+MA++T ELKW
Sbjct: 1011 VSRSSAEAEYRAMAAVTCELKW 1032
>ref|XP_003602418.1| Stomatin-like protein [Medicago truncatula]
gi|355491466|gb|AES72669.1| Stomatin-like protein
[Medicago truncatula]
Length = 605
Score = 45.1 bits (105), Expect(3) = 2e-10
Identities = 21/50 (42%), Positives = 26/50 (52%)
Frame = +3
Query: 27 LLSKFMHTAIVDNWEATLRVVWYRKRDLSQGXXXXXXXXXXXXGWCDSDW 176
+LS+FM D+W A LRVV Y K + QG GWCD+DW
Sbjct: 407 ILSQFMQQPREDHWTAALRVVRYLKGNPGQGIFLDSTSDMKLHGWCDADW 456
Score = 34.3 bits (77), Expect(3) = 2e-10
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +1
Query: 268 VSRYSSEVEYRSMASITFELKW 333
VSR S+E EYRSMA+ T ELKW
Sbjct: 487 VSRSSAESEYRSMANTTCELKW 508
Score = 30.8 bits (68), Expect(3) = 2e-10
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 185 PLT*RSISRWSCFLGSSLVLWKTKKQNM 268
P+T RS++ W LG+S + WKTKKQ +
Sbjct: 460 PITRRSLTGW-VILGNSPISWKTKKQQV 486
>emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera]
Length = 1262
Score = 39.7 bits (91), Expect(3) = 2e-09
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +3
Query: 57 VDNWEATLRVVWYRKRDLSQGXXXXXXXXXXXXGWCDSDW 176
+++WE LRVV Y K QG GWCDSDW
Sbjct: 1073 IEHWEXALRVVRYLKGTPGQGILLXADSDLSLQGWCDSDW 1112
Score = 35.4 bits (80), Expect(3) = 2e-09
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +1
Query: 268 VSRYSSEVEYRSMASITFELKW 333
VSR S+E EYR+MA++T ELKW
Sbjct: 1144 VSRSSAEAEYRAMAAVTCELKW 1165
Score = 31.6 bits (70), Expect(3) = 2e-09
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 185 PLT*RSISRWSCFLGSSLVLWKTKKQN 265
P+T S+S W FLG S + +KTKKQ+
Sbjct: 1116 PVTRXSLSGWLVFLGQSPISYKTKKQH 1142
>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
Length = 1813
Score = 39.7 bits (91), Expect(3) = 2e-08
Identities = 20/49 (40%), Positives = 25/49 (51%)
Frame = +3
Query: 30 LSKFMHTAIVDNWEATLRVVWYRKRDLSQGXXXXXXXXXXXXGWCDSDW 176
LS+FM+T +WEA LRV+ Y K QG +CDSDW
Sbjct: 1531 LSQFMNTPRKPHWEAALRVLRYIKGSPGQGLFLPSENNLTLSAFCDSDW 1579
Score = 33.5 bits (75), Expect(3) = 2e-08
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +2
Query: 197 RSISRWSCFLGSSLVLWKTKKQ 262
RS+S + FLGSSL+ WK+KKQ
Sbjct: 1587 RSVSGYCVFLGSSLISWKSKKQ 1608
Score = 30.0 bits (66), Expect(3) = 2e-08
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 268 VSRYSSEVEYRSMASITFELKW 333
VSR S+E EYR+MA+ EL W
Sbjct: 1611 VSRSSAEAEYRAMANTCLELTW 1632
>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 48.5 bits (114), Expect(3) = 2e-08
Identities = 23/54 (42%), Positives = 27/54 (50%)
Frame = +3
Query: 15 FEFLLLSKFMHTAIVDNWEATLRVVWYRKRDLSQGXXXXXXXXXXXXGWCDSDW 176
F +L++FM D+W A LRVV Y K D QG GWCDSDW
Sbjct: 1130 FSVHILARFMQEPREDHWAAALRVVRYLKADPGQGVFLRRSGDFQITGWCDSDW 1183
Score = 27.3 bits (59), Expect(3) = 2e-08
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 176 ANYPLT*RSISRWSCFLGSSLVLWKTKKQN 265
A P++ RS++ + G S + WKTKKQ+
Sbjct: 1184 AGDPMSRRSVTGYFVQFGDSPISWKTKKQD 1213
Score = 26.9 bits (58), Expect(3) = 2e-08
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 268 VSRYSSEVEYRSMASITFELKW 333
VS+ S+E EYR+M+ + EL W
Sbjct: 1215 VSKSSAEAEYRAMSFLASELLW 1236
>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
Length = 1196
Score = 46.2 bits (108), Expect(2) = 3e-08
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +3
Query: 30 LSKFMHTAIVDNWEATLRVVWYRKRDLSQGXXXXXXXXXXXXGWCDSDW 176
LS+FM +++WEA LRV Y K QG GWCDSDW
Sbjct: 1107 LSQFMQEPRIEHWEAALRVXRYLKGTXGQGILLRXDSDLSLQGWCDSDW 1155
Score = 37.4 bits (85), Expect(2) = 3e-08
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +2
Query: 185 PLT*RSISRWSCFLGSSLVLWKTKKQN 265
P+T RS+S W FLG S + WKTKKQ+
Sbjct: 1159 PVTXRSLSGWLVFLGQSPISWKTKKQH 1185
>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
Length = 1157
Score = 36.6 bits (83), Expect(3) = 4e-08
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +1
Query: 268 VSRYSSEVEYRSMASITFELKW 333
VSR S E EYRSMA+IT ELKW
Sbjct: 1076 VSRSSDEAEYRSMATITCELKW 1097
Score = 34.7 bits (78), Expect(3) = 4e-08
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 182 YPLT*RSISRWSCFLGSSLVLWKTKKQN 265
YPLT RS++ + LG+S + WKTKKQ+
Sbjct: 1047 YPLTRRSLTGYFILLGNSPISWKTKKQH 1074
Score = 30.8 bits (68), Expect(3) = 4e-08
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 27 LLSKFMHTAIVDNWEATLRVVWYRKRDLSQG 119
+L++FM ++WE LRVV Y K +L QG
Sbjct: 1005 MLAQFMQQPNDEHWEVALRVVRYLKGNLGQG 1035
>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
Length = 1450
Score = 47.4 bits (111), Expect(2) = 4e-08
Identities = 21/50 (42%), Positives = 27/50 (54%)
Frame = +3
Query: 27 LLSKFMHTAIVDNWEATLRVVWYRKRDLSQGXXXXXXXXXXXXGWCDSDW 176
++S+FM +++WEA LRVV Y K QG GWCDSDW
Sbjct: 1262 IISQFMQEPRIEHWEAALRVVRYLKGTPGQGVLLRADSDLSLQGWCDSDW 1311
Score = 35.4 bits (80), Expect(2) = 4e-08
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +1
Query: 268 VSRYSSEVEYRSMASITFELKW 333
VSR S+E EYR+MA++T ELKW
Sbjct: 1332 VSRSSAEAEYRAMAAVTCELKW 1353
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 39.7 bits (91), Expect(3) = 7e-08
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +3
Query: 27 LLSKFMHTAIVDNWEATLRVVWYRKRDLSQGXXXXXXXXXXXXGWCDSDW 176
+LS+FM +V +WEA LR+V Y K +QG +CDSD+
Sbjct: 1297 ILSQFMQAPLVAHWEAALRLVRYLKGSPAQGIFLRSDSSLIINAYCDSDY 1346
Score = 34.3 bits (77), Expect(3) = 7e-08
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 185 PLT*RSISRWSCFLGSSLVLWKTKKQN 265
PLT RS+S + +LG S + WKTKKQ+
Sbjct: 1350 PLTRRSLSAYVVYLGDSPISWKTKKQD 1376
Score = 27.3 bits (59), Expect(3) = 7e-08
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 268 VSRYSSEVEYRSMASITFELKW 333
VS S+E EYR+MA ELKW
Sbjct: 1378 VSYSSAEAEYRAMAYTLKELKW 1399
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 41.2 bits (95), Expect(3) = 7e-08
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +3
Query: 30 LSKFMHTAIVDNWEATLRVVWYRKRDLSQGXXXXXXXXXXXXGWCDSDW 176
L++FM D+W A +RVV Y K + QG GWCDSD+
Sbjct: 1270 LAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQINGWCDSDY 1318
Score = 31.2 bits (69), Expect(3) = 7e-08
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 268 VSRYSSEVEYRSMASITFELKW 333
VSR S+E EYR+MA +T EL W
Sbjct: 1350 VSRSSAEAEYRAMAFLTQELMW 1371
Score = 28.9 bits (63), Expect(3) = 7e-08
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 185 PLT*RSISRWSCFLGSSLVLWKTKKQ 262
PLT RS++ + LG + + WKTKKQ
Sbjct: 1322 PLTRRSLTGYFVQLGDTPISWKTKKQ 1347
>ref|XP_006584292.1| PREDICTED: uncharacterized protein LOC102668041 [Glycine max]
Length = 1176
Score = 41.2 bits (95), Expect(3) = 7e-08
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 27 LLSKFMHTAIVDNWEATLRVVWYRKRDLSQGXXXXXXXXXXXXGWCDSDW 176
++S+FM +D+W A +R++ Y KR QG G+CD+DW
Sbjct: 977 VISQFMQNPHLDHWNAVMRILRYVKRAPGQGLLYEDKGSTQLSGYCDADW 1026
Score = 30.8 bits (68), Expect(3) = 7e-08
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 176 ANYPLT*RSISRWSCFLGSSLVLWKTKKQNM 268
A P+ RS S + F+G +L+ WK+KKQ +
Sbjct: 1027 AGCPMDRRSTSGYYVFIGGNLISWKSKKQTV 1057
Score = 29.3 bits (64), Expect(3) = 7e-08
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 280 SSEVEYRSMASITFELKW 333
S+E EYRSMA +T EL W
Sbjct: 1062 SAEAEYRSMAMVTCELMW 1079
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 41.2 bits (95), Expect(3) = 7e-08
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +3
Query: 30 LSKFMHTAIVDNWEATLRVVWYRKRDLSQGXXXXXXXXXXXXGWCDSDW 176
L++FM D+W A +RVV Y K + QG GWCDSD+
Sbjct: 911 LAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQINGWCDSDY 959
Score = 31.2 bits (69), Expect(3) = 7e-08
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 268 VSRYSSEVEYRSMASITFELKW 333
VSR S+E EYR+MA +T EL W
Sbjct: 991 VSRSSAEAEYRAMAFLTQELMW 1012
Score = 28.9 bits (63), Expect(3) = 7e-08
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 185 PLT*RSISRWSCFLGSSLVLWKTKKQ 262
PLT RS++ + LG + + WKTKKQ
Sbjct: 963 PLTRRSLTGYFVQLGDTPISWKTKKQ 988
>gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|38603804|gb|AAR24647.1|
At2g23330 [Arabidopsis thaliana]
gi|110742535|dbj|BAE99183.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 776
Score = 39.7 bits (91), Expect(3) = 7e-08
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +3
Query: 27 LLSKFMHTAIVDNWEATLRVVWYRKRDLSQGXXXXXXXXXXXXGWCDSDW 176
+LS+FM +V +WEA LR+V Y K +QG +CDSD+
Sbjct: 577 ILSQFMQAPLVAHWEAALRLVRYLKGSPAQGIFLRSDSSLIINAYCDSDY 626
Score = 34.3 bits (77), Expect(3) = 7e-08
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 185 PLT*RSISRWSCFLGSSLVLWKTKKQN 265
PLT RS+S + +LG S + WKTKKQ+
Sbjct: 630 PLTRRSLSAYVVYLGDSPISWKTKKQD 656
Score = 27.3 bits (59), Expect(3) = 7e-08
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 268 VSRYSSEVEYRSMASITFELKW 333
VS S+E EYR+MA ELKW
Sbjct: 658 VSYSSAEAEYRAMAYTLKELKW 679
>ref|XP_006586529.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Glycine max]
Length = 168
Score = 39.3 bits (90), Expect(3) = 8e-08
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 27 LLSKFMHTAIVDNWEATLRVVWYRKRDLSQGXXXXXXXXXXXXGWCDSDW 176
++S+FM +D+W A +R++ Y KR L QG +CD DW
Sbjct: 44 VVSQFMQNPHLDHWNAVMRILRYVKRALGQGLLYEDKGNTQLSRYCDVDW 93
Score = 31.6 bits (70), Expect(3) = 8e-08
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 176 ANYPLT*RSISRWSCFLGSSLVLWKTKKQ 262
A+ P+ RS S + F+G +L+ WK+KKQ
Sbjct: 94 ADCPMDRRSASSYCVFIGGNLISWKSKKQ 122
Score = 30.4 bits (67), Expect(3) = 8e-08
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +1
Query: 268 VSRYSSEVEYRSMASITFELKW 333
V++ ++EVEYRSMA +T EL W
Sbjct: 125 VAQSNAEVEYRSMAMVTCELIW 146
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 41.2 bits (95), Expect(3) = 9e-08
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +3
Query: 30 LSKFMHTAIVDNWEATLRVVWYRKRDLSQGXXXXXXXXXXXXGWCDSDW 176
L++FM D+W A +RVV Y K + QG GWCDSD+
Sbjct: 911 LAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQINGWCDSDY 959
Score = 30.8 bits (68), Expect(3) = 9e-08
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +1
Query: 268 VSRYSSEVEYRSMASITFELKW 333
+SR S+E EYR+MA +T EL W
Sbjct: 991 ISRSSAEAEYRAMAFLTQELMW 1012
Score = 28.9 bits (63), Expect(3) = 9e-08
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 185 PLT*RSISRWSCFLGSSLVLWKTKKQ 262
PLT RS++ + LG + + WKTKKQ
Sbjct: 963 PLTRRSLTGYFVQLGDTPISWKTKKQ 988
>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1486
Score = 42.7 bits (99), Expect(3) = 1e-07
Identities = 21/50 (42%), Positives = 25/50 (50%)
Frame = +3
Query: 27 LLSKFMHTAIVDNWEATLRVVWYRKRDLSQGXXXXXXXXXXXXGWCDSDW 176
+LS+FMH +WEA LRVV Y K QG WCDSD+
Sbjct: 1287 ILSQFMHNPKPAHWEAALRVVRYLKSSPGQGILLRANTPLVLSAWCDSDF 1336
Score = 29.6 bits (65), Expect(3) = 1e-07
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 185 PLT*RSISRWSCFLGSSLVLWKTKKQNM 268
P + RS++ W LG S + WKT+KQN+
Sbjct: 1340 PHSDRSLTGWFIQLGGSPLSWKTQKQNV 1367
Score = 27.7 bits (60), Expect(3) = 1e-07
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 268 VSRYSSEVEYRSMASITFELKW 333
VSR S+E EYR+MA E+ W
Sbjct: 1368 VSRSSAEAEYRAMAETVSEIIW 1389
>emb|CAN83978.1| hypothetical protein VITISV_007067 [Vitis vinifera]
Length = 514
Score = 39.3 bits (90), Expect(3) = 3e-07
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +3
Query: 27 LLSKFMHTAIVDNWEATLRVVWYRKRDLSQGXXXXXXXXXXXXGWCDSDW 176
+L++FM ++WEATLRVV Y K + Q +CDSDW
Sbjct: 333 MLAQFMQQPKDEHWEATLRVVRYLKGNPGQSILLRSDCDLKLYAYCDSDW 382
Score = 31.6 bits (70), Expect(3) = 3e-07
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 176 ANYPLT*RSISRWSCFLGSSLVLWKTKKQN 265
A+ PLT RS++ + LG+ + WKTKKQ+
Sbjct: 383 ASCPLTRRSLTGYFILLGNXSISWKTKKQH 412
Score = 28.1 bits (61), Expect(3) = 3e-07
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +1
Query: 271 SRYSSEVEYRSMASITFELKW 333
S S E EYRSMA+ T E KW
Sbjct: 415 SXSSXEAEYRSMATTTCEWKW 435