BLASTX nr result

ID: Achyranthes22_contig00068356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00068356
         (242 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327777.1| short internodes 2 [Populus trichocarpa] gi|...    59   9e-07
ref|XP_006380784.1| hypothetical protein POPTR_0007s13610g [Popu...    57   3e-06
ref|XP_006291335.1| hypothetical protein CARUB_v10017469mg [Caps...    55   1e-05

>ref|XP_002327777.1| short internodes 2 [Populus trichocarpa]
           gi|566170918|ref|XP_006383148.1| SHORT INTERNODES family
           protein [Populus trichocarpa]
           gi|550338728|gb|ERP60945.1| SHORT INTERNODES family
           protein [Populus trichocarpa]
          Length = 344

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/55 (52%), Positives = 35/55 (63%)
 Frame = -3

Query: 240 TTDLMGTVGGGGTDNPASATASFLDPIGASTSGAVYPTPINAFLAGTQFFPPPRS 76
           T+  +   GGGG    AS TASFLDP       ++YP P+N F+AGTQFFP PRS
Sbjct: 296 TSATISATGGGGGVTVASTTASFLDP------SSLYPAPLNTFMAGTQFFPNPRS 344


>ref|XP_006380784.1| hypothetical protein POPTR_0007s13610g [Populus trichocarpa]
           gi|550334816|gb|ERP58581.1| hypothetical protein
           POPTR_0007s13610g [Populus trichocarpa]
          Length = 329

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/50 (56%), Positives = 33/50 (66%)
 Frame = -3

Query: 225 GTVGGGGTDNPASATASFLDPIGASTSGAVYPTPINAFLAGTQFFPPPRS 76
           GT  GGG    AS TA+FLDP       ++YP P+N F+AGTQFFP PRS
Sbjct: 286 GTATGGGGVTVASTTAAFLDP------SSLYPAPLNTFMAGTQFFPNPRS 329


>ref|XP_006291335.1| hypothetical protein CARUB_v10017469mg [Capsella rubella]
           gi|482560042|gb|EOA24233.1| hypothetical protein
           CARUB_v10017469mg [Capsella rubella]
          Length = 369

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/46 (54%), Positives = 33/46 (71%)
 Frame = -3

Query: 213 GGGTDNPASATASFLDPIGASTSGAVYPTPINAFLAGTQFFPPPRS 76
           GGG  + ++A A+++DP       A+YPTPIN F+AGTQFFP PRS
Sbjct: 330 GGGIGSSSAAAATYIDP------AALYPTPINTFMAGTQFFPSPRS 369


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