BLASTX nr result
ID: Achyranthes22_contig00067096
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes22_contig00067096
(405 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 112 8e-32
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 89 4e-21
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 89 4e-21
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 84 5e-21
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 84 5e-21
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 87 6e-21
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 82 1e-20
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 84 2e-20
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g... 84 2e-20
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 82 3e-20
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 82 3e-20
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 83 3e-20
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 82 8e-20
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 82 8e-20
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 82 8e-20
emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group] 84 8e-20
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja... 84 3e-19
emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera] 84 3e-19
gb|EXB73293.1| Retrovirus-related Pol polyprotein from transposo... 86 5e-19
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 79 7e-19
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 112 bits (281), Expect(2) = 8e-32
Identities = 56/75 (74%), Positives = 60/75 (80%)
Frame = +1
Query: 1 KILVVNQAGKKVKRLRADNCLEFCSLEFDRFYKDEGIARHHIVRNTPHQNGVTERMDQTL 180
KIL+ NQ GKK+KRLR DN LEFC EFD+F KDEGIARH VRNTP QNGV ERM+QTL
Sbjct: 522 KILMENQTGKKIKRLRTDNGLEFCWSEFDQFCKDEGIARHRTVRNTPQQNGVAERMNQTL 581
Query: 181 LERARCMLFNANPPR 225
LERARCML NA R
Sbjct: 582 LERARCMLSNAGLDR 596
Score = 50.1 bits (118), Expect(2) = 8e-32
Identities = 31/60 (51%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +2
Query: 230 EAVSTTYYLINRD*SCISYRY*LQDTL*SLVW*--VPDYTNLKAFGCTTYYYVIEGKLEP 403
EAVST YLINR +Q +W DY+NLKAFGCT YY+V EGKLEP
Sbjct: 601 EAVSTACYLINR-----GPHTGIQCKTPMEMWSGKAADYSNLKAFGCTAYYHVSEGKLEP 655
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 89.4 bits (220), Expect(2) = 4e-21
Identities = 42/71 (59%), Positives = 52/71 (73%)
Frame = +1
Query: 1 KILVVNQAGKKVKRLRADNCLEFCSLEFDRFYKDEGIARHHIVRNTPHQNGVTERMDQTL 180
K +V + GK VK LR DN LEFC+ +FD F + EGI RH VR+TP QNGV ERM+QTL
Sbjct: 856 KTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMNQTL 915
Query: 181 LERARCMLFNA 213
++RARCM +A
Sbjct: 916 VQRARCMRIDA 926
Score = 37.7 bits (86), Expect(2) = 4e-21
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +2
Query: 230 EAVSTTYYLINRD*S-CISYRY*LQDTL*SLVW*--VPDYTNLKAFGCTTYYYVIEGKLE 400
EAV+T YL+NR S I ++ + VW +Y+ LK FGC Y +V +GKLE
Sbjct: 935 EAVNTAAYLVNRSPSTAIDFKTPQE------VWSGKPSNYSGLKIFGCPAYAHVSDGKLE 988
Query: 401 P 403
P
Sbjct: 989 P 989
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 89.4 bits (220), Expect(2) = 4e-21
Identities = 42/71 (59%), Positives = 52/71 (73%)
Frame = +1
Query: 1 KILVVNQAGKKVKRLRADNCLEFCSLEFDRFYKDEGIARHHIVRNTPHQNGVTERMDQTL 180
K +V + GK VK LR DN LEFC+ +FD F + EGI RH VR+TP QNGV ERM+QTL
Sbjct: 643 KTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMNQTL 702
Query: 181 LERARCMLFNA 213
++RARCM +A
Sbjct: 703 VQRARCMRIDA 713
Score = 37.7 bits (86), Expect(2) = 4e-21
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +2
Query: 230 EAVSTTYYLINRD*S-CISYRY*LQDTL*SLVW*--VPDYTNLKAFGCTTYYYVIEGKLE 400
EAV+T YL+NR S I ++ + VW +Y+ LK FGC Y +V +GKLE
Sbjct: 722 EAVNTAAYLVNRSPSTAIDFKTPQE------VWSGKPSNYSGLKIFGCPAYAHVSDGKLE 775
Query: 401 P 403
P
Sbjct: 776 P 776
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 84.3 bits (207), Expect(2) = 5e-21
Identities = 41/80 (51%), Positives = 54/80 (67%)
Frame = +1
Query: 1 KILVVNQAGKKVKRLRADNCLEFCSLEFDRFYKDEGIARHHIVRNTPHQNGVTERMDQTL 180
K +V Q +KVK LR DN +EFCS F + K EGI RH+ V +TP QNGV ERM++T+
Sbjct: 529 KTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIMRHYTVPHTPQQNGVAERMNRTI 588
Query: 181 LERARCMLFNANPPRSRGSE 240
+ +ARCML NA P+ +E
Sbjct: 589 ISKARCMLSNAGLPKQFWAE 608
Score = 42.4 bits (98), Expect(2) = 5e-21
Identities = 28/60 (46%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +2
Query: 230 EAVSTTYYLINRD*SCISYRY*LQDTL*SLVW*--VPDYTNLKAFGCTTYYYVIEGKLEP 403
EAVST YLINR S Y + VW +Y++LK FGCT Y +V GKLEP
Sbjct: 608 EAVSTACYLINR-----SPGYAIDKKTPIKVWSGSPANYSDLKVFGCTAYAHVDNGKLEP 662
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 84.3 bits (207), Expect(2) = 5e-21
Identities = 41/80 (51%), Positives = 54/80 (67%)
Frame = +1
Query: 1 KILVVNQAGKKVKRLRADNCLEFCSLEFDRFYKDEGIARHHIVRNTPHQNGVTERMDQTL 180
K +V Q +KVK LR DN +EFCS F + K EGI RH+ V +TP QNGV ERM++T+
Sbjct: 361 KTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIMRHYTVPHTPQQNGVAERMNRTI 420
Query: 181 LERARCMLFNANPPRSRGSE 240
+ +ARCML NA P+ +E
Sbjct: 421 ISKARCMLSNAGLPKQFWAE 440
Score = 42.4 bits (98), Expect(2) = 5e-21
Identities = 28/60 (46%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +2
Query: 230 EAVSTTYYLINRD*SCISYRY*LQDTL*SLVW*--VPDYTNLKAFGCTTYYYVIEGKLEP 403
EAVST YLINR S Y + VW +Y++LK FGCT Y +V GKLEP
Sbjct: 440 EAVSTACYLINR-----SPGYAIDKKTPIKVWSGSPANYSDLKVFGCTAYAHVDNGKLEP 494
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 86.7 bits (213), Expect(2) = 6e-21
Identities = 40/75 (53%), Positives = 53/75 (70%)
Frame = +1
Query: 1 KILVVNQAGKKVKRLRADNCLEFCSLEFDRFYKDEGIARHHIVRNTPHQNGVTERMDQTL 180
K +V Q +KVK LR DN +EFCS +F + + EGI RH+ V +TP QNGV ERM++T+
Sbjct: 483 KTMVERQTERKVKVLRTDNGMEFCSRQFKSYCRSEGIVRHYTVSHTPQQNGVVERMNRTI 542
Query: 181 LERARCMLFNANPPR 225
+ +ARCML NA PR
Sbjct: 543 ISKARCMLSNAGLPR 557
Score = 39.7 bits (91), Expect(2) = 6e-21
Identities = 26/60 (43%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 230 EAVSTTYYLINRD*SCISYRY*LQDTL*SLVW*--VPDYTNLKAFGCTTYYYVIEGKLEP 403
EA ST YLINR S Y + +W +Y++LK FGCT Y +V GKLEP
Sbjct: 562 EAASTACYLINRSPS-----YAIDKKTPIEMWSGSPANYSDLKVFGCTAYAHVDNGKLEP 616
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 82.4 bits (202), Expect(2) = 1e-20
Identities = 40/80 (50%), Positives = 53/80 (66%)
Frame = +1
Query: 1 KILVVNQAGKKVKRLRADNCLEFCSLEFDRFYKDEGIARHHIVRNTPHQNGVTERMDQTL 180
K +V Q +KVK LR DN +EFCS F + K EGI RH+ V +TP QNGV ERM++ +
Sbjct: 544 KTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRII 603
Query: 181 LERARCMLFNANPPRSRGSE 240
+ +ARCML NA P+ +E
Sbjct: 604 ISKARCMLSNAGLPKQFWAE 623
Score = 43.1 bits (100), Expect(2) = 1e-20
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +2
Query: 230 EAVSTTYYLINRD*SCISYRY*LQDTL*SLVW*--VPDYTNLKAFGCTTYYYVIEGKLEP 403
EAVST YLINR S + + ++ VW +Y++LK FGCT Y +V GKLEP
Sbjct: 623 EAVSTACYLINRSPSYANKKTPIE------VWSGSPANYSDLKVFGCTAYAHVDNGKLEP 676
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 83.6 bits (205), Expect(2) = 2e-20
Identities = 40/80 (50%), Positives = 54/80 (67%)
Frame = +1
Query: 1 KILVVNQAGKKVKRLRADNCLEFCSLEFDRFYKDEGIARHHIVRNTPHQNGVTERMDQTL 180
K +V Q +KVK LR DN +EFCS F + K EGI RH+ V +TP QNGV ERM++T+
Sbjct: 751 KTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTI 810
Query: 181 LERARCMLFNANPPRSRGSE 240
+ +ARC+L NA P+ +E
Sbjct: 811 ISKARCLLSNAGLPKQFWAE 830
Score = 41.2 bits (95), Expect(2) = 2e-20
Identities = 27/60 (45%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +2
Query: 230 EAVSTTYYLINRD*SCISYRY*LQDTL*SLVW*--VPDYTNLKAFGCTTYYYVIEGKLEP 403
EAVST YLINR S Y + VW +Y++L+ FGCT Y +V GKLEP
Sbjct: 830 EAVSTACYLINRSPS-----YAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEP 884
>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
Japonica Group]
Length = 1601
Score = 83.6 bits (205), Expect(2) = 2e-20
Identities = 40/80 (50%), Positives = 54/80 (67%)
Frame = +1
Query: 1 KILVVNQAGKKVKRLRADNCLEFCSLEFDRFYKDEGIARHHIVRNTPHQNGVTERMDQTL 180
K +V Q +KVK LR DN +EFCS F + K EGI RH+ V +TP QNGV ERM++T+
Sbjct: 544 KTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTI 603
Query: 181 LERARCMLFNANPPRSRGSE 240
+ +ARC+L NA P+ +E
Sbjct: 604 ISKARCLLSNAGLPKQFWAE 623
Score = 41.2 bits (95), Expect(2) = 2e-20
Identities = 27/60 (45%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +2
Query: 230 EAVSTTYYLINRD*SCISYRY*LQDTL*SLVW*--VPDYTNLKAFGCTTYYYVIEGKLEP 403
EAVST YLINR S Y + VW +Y++L+ FGCT Y +V GKLEP
Sbjct: 623 EAVSTACYLINRSPS-----YAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEP 677
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 82.0 bits (201), Expect(2) = 3e-20
Identities = 40/80 (50%), Positives = 52/80 (65%)
Frame = +1
Query: 1 KILVVNQAGKKVKRLRADNCLEFCSLEFDRFYKDEGIARHHIVRNTPHQNGVTERMDQTL 180
K +V Q KKVK LR DN +EFCS F + K EGI H+ V +TP QNGV ERM+ +
Sbjct: 579 KTMVERQTEKKVKILRTDNGMEFCSKIFKSYCKSEGIVHHYTVPHTPQQNGVAERMNMAI 638
Query: 181 LERARCMLFNANPPRSRGSE 240
+ +ARCML NA+ P+ +E
Sbjct: 639 ISKARCMLSNADLPKQFWAE 658
Score = 42.0 bits (97), Expect(2) = 3e-20
Identities = 28/60 (46%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +2
Query: 230 EAVSTTYYLINRD*SCISYRY*LQDTL*SLVW*--VPDYTNLKAFGCTTYYYVIEGKLEP 403
EAVSTT YLINR S Y VW +Y++L+ FGCT Y +V GKLEP
Sbjct: 658 EAVSTTCYLINRSPS-----YATDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEP 712
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 82.0 bits (201), Expect(2) = 3e-20
Identities = 40/80 (50%), Positives = 52/80 (65%)
Frame = +1
Query: 1 KILVVNQAGKKVKRLRADNCLEFCSLEFDRFYKDEGIARHHIVRNTPHQNGVTERMDQTL 180
K +V Q KKVK LR DN +EFCS F + K EGI H+ V +TP QNGV ERM+ +
Sbjct: 579 KTMVERQTEKKVKILRTDNGMEFCSKIFKSYCKSEGIVHHYTVPHTPQQNGVAERMNMAI 638
Query: 181 LERARCMLFNANPPRSRGSE 240
+ +ARCML NA+ P+ +E
Sbjct: 639 ISKARCMLSNADLPKQFWAE 658
Score = 42.0 bits (97), Expect(2) = 3e-20
Identities = 28/60 (46%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +2
Query: 230 EAVSTTYYLINRD*SCISYRY*LQDTL*SLVW*--VPDYTNLKAFGCTTYYYVIEGKLEP 403
EAVSTT YLINR S Y VW +Y++L+ FGCT Y +V GKLEP
Sbjct: 658 EAVSTTCYLINRSPS-----YATDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEP 712
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 82.8 bits (203), Expect(2) = 3e-20
Identities = 40/80 (50%), Positives = 54/80 (67%)
Frame = +1
Query: 1 KILVVNQAGKKVKRLRADNCLEFCSLEFDRFYKDEGIARHHIVRNTPHQNGVTERMDQTL 180
K +V Q +KVK LR DN +E CS F + K EGI RH+ V +TP QNGV ERM++T+
Sbjct: 453 KTMVERQTERKVKILRTDNGMELCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTI 512
Query: 181 LERARCMLFNANPPRSRGSE 240
+ +ARCML NA+ P+ +E
Sbjct: 513 ISKARCMLSNASLPKQFWAE 532
Score = 41.2 bits (95), Expect(2) = 3e-20
Identities = 27/60 (45%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +2
Query: 230 EAVSTTYYLINRD*SCISYRY*LQDTL*SLVW*--VPDYTNLKAFGCTTYYYVIEGKLEP 403
EAVST YLINR S Y + VW +Y++L+ FGCT Y +V GKLEP
Sbjct: 532 EAVSTACYLINRSPS-----YAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEP 586
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 82.0 bits (201), Expect(2) = 8e-20
Identities = 37/71 (52%), Positives = 51/71 (71%)
Frame = +1
Query: 1 KILVVNQAGKKVKRLRADNCLEFCSLEFDRFYKDEGIARHHIVRNTPHQNGVTERMDQTL 180
K+++ Q +KVK LR DN EFCS F+ + + EGI RHH + +TP QNGV ERM++T+
Sbjct: 536 KVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMNRTI 595
Query: 181 LERARCMLFNA 213
+ RARCML +A
Sbjct: 596 ISRARCMLSHA 606
Score = 40.4 bits (93), Expect(2) = 8e-20
Identities = 28/60 (46%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 230 EAVSTTYYLINRD*SCISYRY*LQDTL*SLVW*--VPDYTNLKAFGCTTYYYVIEGKLEP 403
EA ST YLINR S L VW DY+ LK FGCT Y +V GKLEP
Sbjct: 615 EAASTACYLINRSPSIP-----LNKKTPIEVWSGTPADYSQLKVFGCTAYAHVDNGKLEP 669
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 82.0 bits (201), Expect(2) = 8e-20
Identities = 37/71 (52%), Positives = 51/71 (71%)
Frame = +1
Query: 1 KILVVNQAGKKVKRLRADNCLEFCSLEFDRFYKDEGIARHHIVRNTPHQNGVTERMDQTL 180
K+++ Q +KVK LR DN EFCS F+ + + EGI RHH + +TP QNGV ERM++T+
Sbjct: 536 KVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMNRTI 595
Query: 181 LERARCMLFNA 213
+ RARCML +A
Sbjct: 596 ISRARCMLSHA 606
Score = 40.4 bits (93), Expect(2) = 8e-20
Identities = 28/60 (46%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 230 EAVSTTYYLINRD*SCISYRY*LQDTL*SLVW*--VPDYTNLKAFGCTTYYYVIEGKLEP 403
EA ST YLINR S L VW DY+ LK FGCT Y +V GKLEP
Sbjct: 615 EAASTACYLINRSPSIP-----LNKKTPIEVWSGTPADYSQLKVFGCTAYAHVDNGKLEP 669
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 82.0 bits (201), Expect(2) = 8e-20
Identities = 37/71 (52%), Positives = 51/71 (71%)
Frame = +1
Query: 1 KILVVNQAGKKVKRLRADNCLEFCSLEFDRFYKDEGIARHHIVRNTPHQNGVTERMDQTL 180
K+++ Q +KVK LR DN EFCS F+ + + EGI RHH + +TP QNGV ERM++T+
Sbjct: 536 KVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMNRTI 595
Query: 181 LERARCMLFNA 213
+ RARCML +A
Sbjct: 596 ISRARCMLSHA 606
Score = 40.4 bits (93), Expect(2) = 8e-20
Identities = 28/60 (46%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 230 EAVSTTYYLINRD*SCISYRY*LQDTL*SLVW*--VPDYTNLKAFGCTTYYYVIEGKLEP 403
EA ST YLINR S L VW DY+ LK FGCT Y +V GKLEP
Sbjct: 615 EAASTACYLINRSPSIP-----LNKKTPIEVWSGMPADYSQLKVFGCTAYAHVDNGKLEP 669
>emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]
Length = 1009
Score = 84.3 bits (207), Expect(2) = 8e-20
Identities = 41/80 (51%), Positives = 54/80 (67%)
Frame = +1
Query: 1 KILVVNQAGKKVKRLRADNCLEFCSLEFDRFYKDEGIARHHIVRNTPHQNGVTERMDQTL 180
K +V Q +KVK LR DN +EFCS F + K EGI RH+ V +TP QNGV ERM++T+
Sbjct: 365 KTMVERQTERKVKILRPDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTI 424
Query: 181 LERARCMLFNANPPRSRGSE 240
+ +ARCML NA P+ +E
Sbjct: 425 ISKARCMLSNAGLPKQFWAE 444
Score = 38.1 bits (87), Expect(2) = 8e-20
Identities = 26/60 (43%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 230 EAVSTTYYLINRD*SCISYRY*LQDTL*SLVW*VPD--YTNLKAFGCTTYYYVIEGKLEP 403
EAVST YLINR S Y + VW Y++L+ F CT Y +V GKLEP
Sbjct: 444 EAVSTACYLINRSPS-----YAIDKKTPIEVWSSSPAKYSDLRVFSCTAYAHVDNGKLEP 498
>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
gi|20087076|gb|AAM10749.1|AC112514_2 Putative
retroelement [Oryza sativa Japonica Group]
Length = 1225
Score = 83.6 bits (205), Expect(2) = 3e-19
Identities = 40/80 (50%), Positives = 54/80 (67%)
Frame = +1
Query: 1 KILVVNQAGKKVKRLRADNCLEFCSLEFDRFYKDEGIARHHIVRNTPHQNGVTERMDQTL 180
K +V Q +KVK LR DN ++FCS F + K EGI RH+ V +TP QNGV ERM++T+
Sbjct: 505 KTMVERQTERKVKILRTDNGMDFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTI 564
Query: 181 LERARCMLFNANPPRSRGSE 240
+ +ARCML NA P+ +E
Sbjct: 565 ISKARCMLSNAGLPKQFWAE 584
Score = 37.0 bits (84), Expect(2) = 3e-19
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 230 EAVSTTYYLINRD*SCISYRY*LQDTL*SLVW*--VPDYTNLKAFGCTTYYYVIEGKLEP 403
EAVST YLINR S Y + VW +Y++L+ FGC Y +V KLEP
Sbjct: 584 EAVSTACYLINRSPS-----YAIDKKTPIKVWSGSPANYSDLRVFGCIAYAHVDNSKLEP 638
>emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera]
Length = 947
Score = 84.3 bits (207), Expect(2) = 3e-19
Identities = 41/68 (60%), Positives = 51/68 (75%)
Frame = +1
Query: 1 KILVVNQAGKKVKRLRADNCLEFCSLEFDRFYKDEGIARHHIVRNTPHQNGVTERMDQTL 180
+ILV Q G+KVK+LR DN LEF S +F+ F + EGIA H VR TP QNG+ ERM++T+
Sbjct: 536 EILVETQVGRKVKKLRTDNELEFLSNDFNSFCQKEGIATHRTVRYTPQQNGLAERMNRTI 595
Query: 181 LERARCML 204
LER RCML
Sbjct: 596 LERVRCML 603
Score = 36.2 bits (82), Expect(2) = 3e-19
Identities = 26/61 (42%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 227 VEAVSTTYYLINRD*SCISYRY*LQDTL*SLVW*--VPDYTNLKAFGCTTYYYVIEGKLE 400
VEAV T +LI+R S LQ W V DY +LK FGCT Y + KLE
Sbjct: 614 VEAVETVVHLISRSPSSA-----LQFKTPQEKWTGKVVDYQHLKVFGCTAYVHTKTDKLE 668
Query: 401 P 403
P
Sbjct: 669 P 669
>gb|EXB73293.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis]
Length = 1822
Score = 85.5 bits (210), Expect(2) = 5e-19
Identities = 40/69 (57%), Positives = 50/69 (72%)
Frame = +1
Query: 19 QAGKKVKRLRADNCLEFCSLEFDRFYKDEGIARHHIVRNTPHQNGVTERMDQTLLERARC 198
Q GKK+K+LR DN LEF F++F KDE + RH VR TP QNG+ ERM++TLLER RC
Sbjct: 5 QTGKKIKKLRTDNGLEFLGDGFNQFLKDECVVRHKTVRKTPQQNGLAERMNRTLLERVRC 64
Query: 199 MLFNANPPR 225
ML A+ P+
Sbjct: 65 MLIEASLPK 73
Score = 34.3 bits (77), Expect(2) = 5e-19
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Frame = +2
Query: 230 EAVSTTYYLINR-D*SCISYRY*LQDTL*SLVW*VPDYT----NLKAFGCTTYYYVIEGK 394
E V+T YL+NR + I ++ + VW DY NLK FGCT Y + EGK
Sbjct: 78 EVVNTAAYLVNRCPLAAIDFKTPEE------VW--TDYPLNFENLKVFGCTAYAHQKEGK 129
Query: 395 LEP 403
L+P
Sbjct: 130 LDP 132
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 79.0 bits (193), Expect(2) = 7e-19
Identities = 36/71 (50%), Positives = 50/71 (70%)
Frame = +1
Query: 1 KILVVNQAGKKVKRLRADNCLEFCSLEFDRFYKDEGIARHHIVRNTPHQNGVTERMDQTL 180
K+++ Q +KVK L DN EFCS F+ + + EGI RHH + +TP QNGV ERM++T+
Sbjct: 538 KVMIERQTERKVKLLCTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMNRTI 597
Query: 181 LERARCMLFNA 213
+ RARCML +A
Sbjct: 598 ISRARCMLSHA 608
Score = 40.4 bits (93), Expect(2) = 7e-19
Identities = 28/60 (46%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 230 EAVSTTYYLINRD*SCISYRY*LQDTL*SLVW*--VPDYTNLKAFGCTTYYYVIEGKLEP 403
EA ST YLINR S L VW DY+ LK FGCT Y +V GKLEP
Sbjct: 617 EAASTACYLINRSPSIP-----LNKKTPIEVWSGTPADYSQLKVFGCTAYAHVDNGKLEP 671