BLASTX nr result
ID: Achyranthes22_contig00065109
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes22_contig00065109
(411 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 149 4e-34
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 149 5e-34
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera] 149 5e-34
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi... 147 1e-33
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera] 147 2e-33
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera] 145 4e-33
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab... 144 9e-33
emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera] 144 9e-33
emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera] 142 4e-32
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi... 137 1e-30
emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera] 135 7e-30
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 134 2e-29
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi... 134 2e-29
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 131 8e-29
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t... 131 8e-29
emb|CAN83378.1| hypothetical protein VITISV_011333 [Vitis vinifera] 130 2e-28
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 129 3e-28
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 129 3e-28
dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t... 129 5e-28
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 127 1e-27
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 149 bits (376), Expect = 4e-34
Identities = 77/131 (58%), Positives = 94/131 (71%), Gaps = 4/131 (3%)
Frame = +2
Query: 29 ELIGAGERRDGLYYFRCVP--IVQAVTVPRLTE-FELWHRRLGHPSDRVLKLVPAISSSS 199
ELIG G RRDGLYYF VQ V+V ELWH+R+GHPS++V+KL+P +S+
Sbjct: 232 ELIGTGVRRDGLYYFGGAEGDSVQHVSVHNAASTLELWHKRMGHPSEKVVKLLPPVSNLK 291
Query: 200 STKKLNKACTVCPQAKQHRDSFPVSDNKASKIFDLIHCDLWGP-NTTPSCDAFYFLTIVD 376
+ LNKAC +C +AK RD FP+SDNKA++IF+ IHCDLWG SC A YFLTIVD
Sbjct: 292 GS--LNKACEICFRAKHXRDKFPLSDNKATRIFEKIHCDLWGSYKHVSSCGARYFLTIVD 349
Query: 377 DFSRAVWVYLL 409
DFSRAVW+YLL
Sbjct: 350 DFSRAVWIYLL 360
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 149 bits (375), Expect = 5e-34
Identities = 77/131 (58%), Positives = 94/131 (71%), Gaps = 4/131 (3%)
Frame = +2
Query: 29 ELIGAGERRDGLYYFRCVP--IVQAVTVPRLTE-FELWHRRLGHPSDRVLKLVPAISSSS 199
ELIG G RRDGLYYF VQ V+V ELWH+R+GHPS++V+KL+P +S+
Sbjct: 146 ELIGTGVRRDGLYYFGGAEGDSVQHVSVHNAASTLELWHKRMGHPSEKVVKLLPPVSNLK 205
Query: 200 STKKLNKACTVCPQAKQHRDSFPVSDNKASKIFDLIHCDLWGP-NTTPSCDAFYFLTIVD 376
+ LNKAC +C +AK RD FP+SDNKA++IF+ IHCDLWG SC A YFLTIVD
Sbjct: 206 GS--LNKACEICFRAKHPRDKFPLSDNKATRIFEKIHCDLWGSYKHVSSCGARYFLTIVD 263
Query: 377 DFSRAVWVYLL 409
DFSRAVW+YLL
Sbjct: 264 DFSRAVWIYLL 274
>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
Length = 1196
Score = 149 bits (375), Expect = 5e-34
Identities = 77/131 (58%), Positives = 94/131 (71%), Gaps = 4/131 (3%)
Frame = +2
Query: 29 ELIGAGERRDGLYYFRCVP--IVQAVTVPRLTE-FELWHRRLGHPSDRVLKLVPAISSSS 199
ELIG G RRDGLYYF VQ V+V ELWH+R+GHPS++V+KL+P +S+
Sbjct: 359 ELIGTGVRRDGLYYFDGAEGDSVQHVSVHNAASTLELWHKRMGHPSEKVVKLLPPVSNLK 418
Query: 200 STKKLNKACTVCPQAKQHRDSFPVSDNKASKIFDLIHCDLWGP-NTTPSCDAFYFLTIVD 376
+ LNKAC +C +AK RD FP+SDNKA++IF+ IHCDLWG SC A YFLTIVD
Sbjct: 419 GS--LNKACEICFRAKHPRDKFPLSDNKATRIFEKIHCDLWGSYKHVSSCGARYFLTIVD 476
Query: 377 DFSRAVWVYLL 409
DFSRAVW+YLL
Sbjct: 477 DFSRAVWIYLL 487
>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 147 bits (371), Expect = 1e-33
Identities = 71/127 (55%), Positives = 91/127 (71%), Gaps = 1/127 (0%)
Frame = +2
Query: 32 LIGAGERRDGLYYFRCVPIVQAVTVPRLTEFELWHRRLGHPSDRVLKLVPAISSSSSTKK 211
++GAG R G ++FR I +VTV +ELWH R+GHP+ RV+ L+P S S S+
Sbjct: 359 VMGAGRRVGGTFHFRSTEIAASVTVKEEKNYELWHSRMGHPAARVVSLIPESSVSVSSTH 418
Query: 212 LNKACTVCPQAKQHRDSFPVSDNKASKIFDLIHCDLWGPNTTPS-CDAFYFLTIVDDFSR 388
LNKAC VC +AKQ R+SFP+S NK +IF+LI+CDLWGP TPS A YFLTI+DD+SR
Sbjct: 419 LNKACDVCHRAKQTRNSFPLSINKTLRIFELIYCDLWGPYRTPSHTGARYFLTIIDDYSR 478
Query: 389 AVWVYLL 409
VW+YLL
Sbjct: 479 GVWLYLL 485
>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
Length = 1450
Score = 147 bits (370), Expect = 2e-33
Identities = 75/131 (57%), Positives = 94/131 (71%), Gaps = 4/131 (3%)
Frame = +2
Query: 29 ELIGAGERRDGLYYFRCVP--IVQAVTVPRLTE-FELWHRRLGHPSDRVLKLVPAISSSS 199
ELIG G RRDGLYYF VQ V+V ELWH+R+GHPS++V+KL+P +S+
Sbjct: 479 ELIGTGVRRDGLYYFGGAEGDSVQHVSVHNAASTLELWHKRMGHPSEKVVKLLPPVSNLK 538
Query: 200 STKKLNKACTVCPQAKQHRDSFPVSDNKASKIFDLIHCDLWGP-NTTPSCDAFYFLTIVD 376
+ LNKAC +C +AK RD FP++DNKA++IF+ IHCDLWG SC A YFLTI+D
Sbjct: 539 GS--LNKACEICFRAKHPRDKFPLTDNKATRIFEKIHCDLWGSYKHVSSCAARYFLTIID 596
Query: 377 DFSRAVWVYLL 409
DFSRAVW+YLL
Sbjct: 597 DFSRAVWIYLL 607
>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
Length = 1129
Score = 145 bits (367), Expect = 4e-33
Identities = 76/131 (58%), Positives = 92/131 (70%), Gaps = 4/131 (3%)
Frame = +2
Query: 29 ELIGAGERRDGLYYFRCVP--IVQAVTVPRLTE-FELWHRRLGHPSDRVLKLVPAISSSS 199
ELIG G RRDGLYYF VQ V+V ELWH R+GHPS++V+KL+P +S+
Sbjct: 227 ELIGTGVRRDGLYYFGGAEGDSVQHVSVHNAASTLELWHNRMGHPSEKVVKLLPLVSNIK 286
Query: 200 STKKLNKACTVCPQAKQHRDSFPVSDNKASKIFDLIHCDLWGP-NTTPSCDAFYFLTIVD 376
+ LNKAC +C +AK RD FP+SDNKA++IF+ IHCDLW SC A YFLTIVD
Sbjct: 287 GS--LNKACEICFRAKHPRDKFPLSDNKATRIFEKIHCDLWASYKHVSSCGARYFLTIVD 344
Query: 377 DFSRAVWVYLL 409
DFSRAVW+YLL
Sbjct: 345 DFSRAVWIYLL 355
>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1486
Score = 144 bits (364), Expect = 9e-33
Identities = 72/127 (56%), Positives = 88/127 (69%), Gaps = 1/127 (0%)
Frame = +2
Query: 32 LIGAGERRDGLYYFRCVPIVQAVTVPRLTEFELWHRRLGHPSDRVLKLVPAISSSSSTKK 211
LIGAG +GLY+FR V AVT L +LWH+RLGHPS + L L+P +SST
Sbjct: 474 LIGAGRELNGLYFFRGVETAAAVTSKALPSSQLWHQRLGHPSSKALHLLPFSDVTSSTFD 533
Query: 212 LNKACTVCPQAKQHRDSFPVSDNKASKIFDLIHCDLWGP-NTTPSCDAFYFLTIVDDFSR 388
+K C +C QAKQ RD FP+S NK S F+L+HCDLWGP TT C + YFLT+VDD+SR
Sbjct: 534 -SKTCEICIQAKQTRDPFPLSSNKTSFAFELVHCDLWGPYRTTSICGSRYFLTLVDDYSR 592
Query: 389 AVWVYLL 409
AVW+YLL
Sbjct: 593 AVWLYLL 599
>emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera]
Length = 1262
Score = 144 bits (364), Expect = 9e-33
Identities = 75/131 (57%), Positives = 93/131 (70%), Gaps = 4/131 (3%)
Frame = +2
Query: 29 ELIGAGERRDGLYYFRCVP--IVQAVTVPRLTE-FELWHRRLGHPSDRVLKLVPAISSSS 199
ELIG G RRDGLYYF V+ V+V ELWH+R+GHPS++V+KL+P +S+
Sbjct: 478 ELIGTGVRRDGLYYFGGAEGDSVEHVSVHNAASTLELWHKRMGHPSEKVVKLLPPVSNLK 537
Query: 200 STKKLNKACTVCPQAKQHRDSFPVSDNKASKIFDLIHCDLWGP-NTTPSCDAFYFLTIVD 376
+ LNKAC +C +AK RD F +SDNKA++IF+ IHCDLWG SC A YFLTIVD
Sbjct: 538 GS--LNKACEICFRAKHPRDKFSLSDNKATRIFEKIHCDLWGSYKHVSSCGARYFLTIVD 595
Query: 377 DFSRAVWVYLL 409
DFSRAVW+YLL
Sbjct: 596 DFSRAVWIYLL 606
>emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]
Length = 1191
Score = 142 bits (359), Expect = 4e-32
Identities = 75/131 (57%), Positives = 92/131 (70%), Gaps = 4/131 (3%)
Frame = +2
Query: 29 ELIGAGERRDGLYYFRCVP--IVQAVTVPRLTE-FELWHRRLGHPSDRVLKLVPAISSSS 199
ELI G RRDGLYYF VQ V+V ELWH+R+ HPS++V+KL+P +S+
Sbjct: 191 ELIRTGVRRDGLYYFGGAEGDSVQHVSVHNAASTLELWHKRMRHPSEKVVKLLPPVSNLK 250
Query: 200 STKKLNKACTVCPQAKQHRDSFPVSDNKASKIFDLIHCDLWGP-NTTPSCDAFYFLTIVD 376
+ LNKAC +C +AK RD FP+SDNKA++IF+ IHCDLWG SC A YFLTIVD
Sbjct: 251 GS--LNKACEICFRAKHPRDKFPLSDNKATRIFEKIHCDLWGSYKHVSSCGARYFLTIVD 308
Query: 377 DFSRAVWVYLL 409
DFSRAVW+YLL
Sbjct: 309 DFSRAVWIYLL 319
>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1156
Score = 137 bits (346), Expect = 1e-30
Identities = 70/127 (55%), Positives = 88/127 (69%), Gaps = 1/127 (0%)
Frame = +2
Query: 32 LIGAGERRDGLYYFRCVPIVQAVTVPRLTEFELWHRRLGHPSDRVLKLVPAISSSSSTKK 211
LIG+GE RDG+YY V + T ++ LWH+RLGHPS VL +P ++SSS +
Sbjct: 58 LIGSGEERDGVYYLTDVATAKIHTAKVSSDQALWHQRLGHPSFSVLSSLPVLTSSSLSVG 117
Query: 212 LNKACTVCPQAKQHRDSFPVSDNKASKIFDLIHCDLWGPNTTP-SCDAFYFLTIVDDFSR 388
+++C VC +AKQ R+ FPVS NK+ + F LIHCD+WGP P SC A YFLTIVDDFSR
Sbjct: 118 -SRSCDVCFRAKQTREVFPVSTNKSIECFSLIHCDVWGPYRVPSSCGAVYFLTIVDDFSR 176
Query: 389 AVWVYLL 409
AVW YLL
Sbjct: 177 AVWTYLL 183
>emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]
Length = 1109
Score = 135 bits (339), Expect = 7e-30
Identities = 66/128 (51%), Positives = 85/128 (66%), Gaps = 2/128 (1%)
Frame = +2
Query: 32 LIGAGERRDGLYYFRCVPIVQAVTVPRLTEFELWHRRLGHPSDRVLKLVPAISS-SSSTK 208
LIG GE+ +GLY+ + V ++A + +ELWHRR+GHPS RV+ L+ + S +
Sbjct: 291 LIGVGEQCEGLYFLKGVAPIRAYKTTSIASYELWHRRMGHPSSRVVDLIXEVDSVGRNDG 350
Query: 209 KLNKACTVCPQAKQHRDSFPVSDNKASKIFDLIHCDLWGPNTTP-SCDAFYFLTIVDDFS 385
NK C +C +A+Q R+ F SDNKA + FDLIHCDLWG P SC YFLTIVDD S
Sbjct: 351 XKNKFCDICFRAQQTREMFFSSDNKAKECFDLIHCDLWGAYRVPASCGGIYFLTIVDDCS 410
Query: 386 RAVWVYLL 409
RAVW+YLL
Sbjct: 411 RAVWIYLL 418
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 134 bits (336), Expect = 2e-29
Identities = 68/127 (53%), Positives = 82/127 (64%), Gaps = 1/127 (0%)
Frame = +2
Query: 32 LIGAGERRDGLYYFRCVPIVQAVTVPRLTEFELWHRRLGHPSDRVLKLVPAISSSSSTKK 211
LIG GE RDG+YY V T+ LWH+RLGHPS VL +P S SS +
Sbjct: 480 LIGTGEERDGVYYLTDAATTTVHKVDVTTDHALWHQRLGHPSFSVLSSLPLFSGSSCSVS 539
Query: 212 LNKACTVCPQAKQHRDSFPVSDNKASKIFDLIHCDLWGPNTTP-SCDAFYFLTIVDDFSR 388
+++C VC +AKQ R+ FP S NK++ F LIHCD+WGP P SC A YFLTIVDDFSR
Sbjct: 540 -SRSCDVCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVPSSCGAVYFLTIVDDFSR 598
Query: 389 AVWVYLL 409
+VW YLL
Sbjct: 599 SVWTYLL 605
>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 134 bits (336), Expect = 2e-29
Identities = 68/127 (53%), Positives = 82/127 (64%), Gaps = 1/127 (0%)
Frame = +2
Query: 32 LIGAGERRDGLYYFRCVPIVQAVTVPRLTEFELWHRRLGHPSDRVLKLVPAISSSSSTKK 211
LIG GE RDG+YY V T+ LWH+RLGHPS VL +P S SS +
Sbjct: 480 LIGTGEERDGVYYLTDAATTTVHKVDITTDHALWHQRLGHPSFSVLSSLPLFSGSSCSVS 539
Query: 212 LNKACTVCPQAKQHRDSFPVSDNKASKIFDLIHCDLWGPNTTP-SCDAFYFLTIVDDFSR 388
+++C VC +AKQ R+ FP S NK++ F LIHCD+WGP P SC A YFLTIVDDFSR
Sbjct: 540 -SRSCDVCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVPSSCGAVYFLTIVDDFSR 598
Query: 389 AVWVYLL 409
+VW YLL
Sbjct: 599 SVWTYLL 605
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 131 bits (330), Expect = 8e-29
Identities = 64/125 (51%), Positives = 82/125 (65%), Gaps = 1/125 (0%)
Frame = +2
Query: 38 GAGERRDGLYYFRCVPIVQAVTVPRLTEFELWHRRLGHPSDRVLKLVPAISSSSSTKKLN 217
G G+R +G + FR + AV F+LWHRRLGH SD+++ L+P SS + L
Sbjct: 261 GIGKRENGSFCFRGMENAAAVHTSVKAPFDLWHRRLGHASDKIVNLLPRELLSSGKEILE 320
Query: 218 KACTVCPQAKQHRDSFPVSDNKASKIFDLIHCDLWGPNTTPS-CDAFYFLTIVDDFSRAV 394
C C +AKQ RD+FP+SDN++ F LIHCD+WGP TPS A YFLTIVDD+SR V
Sbjct: 321 NVCDTCMRAKQTRDTFPLSDNRSMDSFQLIHCDVWGPYRTPSYSGARYFLTIVDDYSRGV 380
Query: 395 WVYLL 409
WVYL+
Sbjct: 381 WVYLM 385
>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1462
Score = 131 bits (330), Expect = 8e-29
Identities = 66/128 (51%), Positives = 94/128 (73%), Gaps = 2/128 (1%)
Frame = +2
Query: 32 LIGAGERRDGLYYFRCVPIVQAVTVPRL-TEFELWHRRLGHPSDRVLKLVPAISSSSSTK 208
LIGAG++++GLY+FR V ++T R+ + +LWH RLGHPS +VLKL+ + S S+
Sbjct: 439 LIGAGKQQNGLYFFRGTETVASMT--RMDSSSQLWHCRLGHPSSKVLKLL-SFSDSTGHA 495
Query: 209 KLNKACTVCPQAKQHRDSFPVSDNKASKIFDLIHCDLWGP-NTTPSCDAFYFLTIVDDFS 385
+K C +C +AKQ RD FP+S+NK S F+++HCDLWGP TT C + YFLT+VD+++
Sbjct: 496 FDSKTCEICIKAKQTRDPFPLSNNKTSSPFEMVHCDLWGPYRTTSICGSNYFLTLVDNYT 555
Query: 386 RAVWVYLL 409
RAVW+YLL
Sbjct: 556 RAVWLYLL 563
>emb|CAN83378.1| hypothetical protein VITISV_011333 [Vitis vinifera]
Length = 758
Score = 130 bits (326), Expect = 2e-28
Identities = 63/128 (49%), Positives = 83/128 (64%), Gaps = 2/128 (1%)
Frame = +2
Query: 32 LIGAGERRDGLYYFRCVPIVQAVTVPRLTEFELWHRRLGHPSDRVLKLVPAISSSSSTKK 211
LIG G++ +GLY+ + V ++ A + +ELWHRR+GHPS RV+ L+ + S
Sbjct: 220 LIGTGKQCEGLYFLKGVALICAYETTGIASYELWHRRMGHPSSRVVDLIYEVDSVGGNDG 279
Query: 212 L-NKACTVCPQAKQHRDSFPVSDNKASKIFDLIHCDLWGPNTTP-SCDAFYFLTIVDDFS 385
+ NK C +C +A+Q R+ F SDNK + FDLIHCDLWG P SC YFLTIVDD S
Sbjct: 280 VKNKFCDICFRAQQTREVFFSSDNKVKECFDLIHCDLWGAYRVPTSCGGIYFLTIVDDCS 339
Query: 386 RAVWVYLL 409
R VW+YLL
Sbjct: 340 RVVWIYLL 347
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 129 bits (325), Expect = 3e-28
Identities = 63/125 (50%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
Frame = +2
Query: 38 GAGERRDGLYYFRCVPIVQAVTVPRLTEFELWHRRLGHPSDRVLKLVPAISSSSSTKKLN 217
G G+R +G + FR + AV F+LWHRRLGH SD+++ L+P SS + L
Sbjct: 261 GIGKRENGSFCFRGMENAAAVHTSVKAPFDLWHRRLGHASDKIVNLLPRELLSSGKEILE 320
Query: 218 KACTVCPQAKQHRDSFPVSDNKASKIFDLIHCDLWGPNTTPS-CDAFYFLTIVDDFSRAV 394
C C +AKQ RD+FP+ DN++ F LIHCD+WGP TPS A YFLTIVDD+SR V
Sbjct: 321 NVCDTCMRAKQTRDTFPLRDNRSMDSFQLIHCDVWGPYRTPSYSGARYFLTIVDDYSRGV 380
Query: 395 WVYLL 409
WVYL+
Sbjct: 381 WVYLM 385
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 129 bits (325), Expect = 3e-28
Identities = 68/127 (53%), Positives = 83/127 (65%), Gaps = 1/127 (0%)
Frame = +2
Query: 32 LIGAGERRDGLYYFRCVPIVQAVTVPRLTEFELWHRRLGHPSDRVLKLVPAISSSSSTKK 211
LIG+GE R G+YY V + T ++ LWH+RLGHPS VL +P S +SST
Sbjct: 497 LIGSGEERGGVYYLTDVTPAKIHTANVDSDQALWHQRLGHPSFSVLSSLPLFSKTSSTVT 556
Query: 212 LNKACTVCPQAKQHRDSFPVSDNKASKIFDLIHCDLWGPNTTP-SCDAFYFLTIVDDFSR 388
+ +C VC +AKQ R+ FP S NK + F LIHCD+WGP P SC A YFLTIVDD+SR
Sbjct: 557 -SHSCDVCFRAKQTREVFPESINKTEECFSLIHCDVWGPYRVPASCGAVYFLTIVDDYSR 615
Query: 389 AVWVYLL 409
AVW YLL
Sbjct: 616 AVWTYLL 622
>dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1098
Score = 129 bits (323), Expect = 5e-28
Identities = 66/128 (51%), Positives = 84/128 (65%), Gaps = 2/128 (1%)
Frame = +2
Query: 32 LIGAGERRDGLYYFRCVPIVQAVT-VPRLTEFELWHRRLGHPSDRVLKLVPAISSSSSTK 208
LIGAGE R+G+YYF V + + LWH RLGHPS VL P +SSSS
Sbjct: 471 LIGAGEEREGVYYFTGVLAARVNKGFKESSSATLWHHRLGHPSTGVLLSFPEFASSSSDL 530
Query: 209 KLNKACTVCPQAKQHRDSFPVSDNKASKIFDLIHCDLWGPNTTP-SCDAFYFLTIVDDFS 385
++ K+C +C +AKQ R+ F S NK + F+LIHCD+WGP TP SC + YFLTIVDDFS
Sbjct: 531 EIIKSCDICYRAKQAREVFSPSLNKTTVCFELIHCDVWGPYRTPASCGSVYFLTIVDDFS 590
Query: 386 RAVWVYLL 409
R+VW +L+
Sbjct: 591 RSVWTFLM 598
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 127 bits (320), Expect = 1e-27
Identities = 62/123 (50%), Positives = 80/123 (65%), Gaps = 1/123 (0%)
Frame = +2
Query: 44 GERRDGLYYFRCVPIVQAVTVPRLTEFELWHRRLGHPSDRVLKLVPAISSSSSTKKLNKA 223
G+R +G + FR + AV F+LWHRRLGH SD+++ L+P SS + L
Sbjct: 487 GKRENGSFCFRGMENAAAVHTSVKAPFDLWHRRLGHASDKIVNLLPRELLSSGKEILENV 546
Query: 224 CTVCPQAKQHRDSFPVSDNKASKIFDLIHCDLWGPNTTPS-CDAFYFLTIVDDFSRAVWV 400
C C +AKQ RD+FP+SDN++ F LIHCD+WGP PS A YFLTIVDD+SR VWV
Sbjct: 547 CDTCMRAKQTRDTFPLSDNRSMDSFQLIHCDVWGPYRAPSYSGARYFLTIVDDYSRGVWV 606
Query: 401 YLL 409
YL+
Sbjct: 607 YLM 609