BLASTX nr result
ID: Achyranthes22_contig00062708
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Achyranthes22_contig00062708 (564 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 192 5e-47 dbj|BAA22288.1| polyprotein [Oryza australiensis] 182 4e-44 gb|ABA97705.1| retrotransposon protein, putative, Ty1-copia subc... 181 1e-43 emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group] 181 1e-43 gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc... 179 5e-43 gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group] 179 5e-43 gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subc... 177 2e-42 gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc... 174 1e-41 gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subc... 173 2e-41 gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Ja... 170 2e-40 gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e... 168 7e-40 ref|XP_004978922.1| PREDICTED: uncharacterized protein LOC101776... 158 8e-37 gb|EMS50467.1| Retrovirus-related Pol polyprotein from transposo... 155 5e-36 gb|EMT06479.1| hypothetical protein F775_22266 [Aegilops tauschii] 155 8e-36 gb|AAX96621.1| retrotransposon protein, putative, Ty1-copia sub-... 149 6e-34 gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc... 149 6e-34 emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera] 145 5e-33 gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subc... 144 1e-32 gb|ADJ18449.1| gag/pol protein [Bryonia dioica] 142 4e-32 gb|EXC18499.1| Retrovirus-related Pol polyprotein from transposo... 140 2e-31 >gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score 19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1| putative retrotransposon protein [Arabidopsis thaliana] Length = 964 Score = 192 bits (488), Expect = 5e-47 Identities = 110/196 (56%), Positives = 129/196 (65%), Gaps = 9/196 (4%) Frame = -2 Query: 563 VARNGVFLESNMLSTKASGSNDL-EEVRETEPQVVASSSDSIQETIPSLERTEEVPQVPQ 387 V RNG FLE LS SGS L EEVRE + V S +E L R E V Sbjct: 354 VVRNGAFLEREFLSKGTSGSKVLLEEVREPQGDVPTSQ----EEHQLDLRRVVEPILVEP 409 Query: 386 QVETTNEAQDPRRSSRKIVPPKRY--------SYLMTENNEPTNYKAALESPDSDKWLEA 231 +V RRS R P R+ + M E++EPT+Y+ AL PDSDKWLEA Sbjct: 410 EV---------RRSERSRHEPDRFRDWVMDDHALFMIESDEPTSYEEALMGPDSDKWLEA 460 Query: 230 MKTEMDSMSENQVWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQVHGI 51 K+EM+SMS+N+VW LVDLPDGVKPIECKWI+K K+DMDGN+ +YKA LVAKGYKQVHGI Sbjct: 461 AKSEMESMSQNKVWTLVDLPDGVKPIECKWIFKKKIDMDGNIQIYKAGLVAKGYKQVHGI 520 Query: 50 DYEETFSPVAMLKSIR 3 DY+ET+SPVAMLKSIR Sbjct: 521 DYDETYSPVAMLKSIR 536 >dbj|BAA22288.1| polyprotein [Oryza australiensis] Length = 1317 Score = 182 bits (463), Expect = 4e-44 Identities = 102/194 (52%), Positives = 132/194 (68%), Gaps = 7/194 (3%) Frame = -2 Query: 563 VARNGVFLESNMLSTKASGSN-DLEEVRETEPQVVASSSDSIQETIPSLERTEEVPQVPQ 387 VAR+GVFLE LS + SG LEEV+ET P+ V+++++ QE + P Sbjct: 710 VARHGVFLEKEFLSRRVSGIRVHLEEVQET-PETVSATTEPQQE---------DQSVAPP 759 Query: 386 QVETTNEAQDPRRSSRKIVPPKRYS------YLMTENNEPTNYKAALESPDSDKWLEAMK 225 V+T PRRS R P RY+ L+ +N+EP Y+ A+ DS+KWL AMK Sbjct: 760 VVDTPA----PRRSERSRRAPDRYTGAEQRDILLLDNDEPKTYEEAMVGHDSNKWLGAMK 815 Query: 224 TEMDSMSENQVWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQVHGIDY 45 +E++SM +NQVW+LVD PDGVK IECKW++K K DMDGNV +YKARLVAKG+KQ+ G+DY Sbjct: 816 SEIESMYDNQVWNLVDPPDGVKTIECKWLFKKKADMDGNVHIYKARLVAKGFKQIQGVDY 875 Query: 44 EETFSPVAMLKSIR 3 +ETFSPVAMLKSIR Sbjct: 876 DETFSPVAMLKSIR 889 >gb|ABA97705.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 810 Score = 181 bits (459), Expect = 1e-43 Identities = 101/196 (51%), Positives = 134/196 (68%), Gaps = 9/196 (4%) Frame = -2 Query: 563 VARNGVFLESNMLSTKASGSN-DLEEVRETEPQVVASSSDSIQETIPSLERTEEVPQVPQ 387 VAR+GVFLE +S K SGS LEE++ET P+ ++S+ Q +++ E+V Sbjct: 406 VARHGVFLEKEFISRKDSGSMVRLEEIQET-PENASTSTQPQQAEQDVVQQVEQVV---- 460 Query: 386 QVETTNEAQDPRRSSRKIVPPKRYSYLMT--------ENNEPTNYKAALESPDSDKWLEA 231 VE EA RRS R P RY+ L T +N+EPT Y+ A+ PDS+KWL A Sbjct: 461 -VEPVVEALASRRSKRIRRTPARYALLTTGQRDILLLDNDEPTIYEEAMVGPDSEKWLGA 519 Query: 230 MKTEMDSMSENQVWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQVHGI 51 MK++++SM NQVW+LVD PDGVK I+CKW++K D+DGNV +YKARLVAKG++Q+ G+ Sbjct: 520 MKSKIESMHVNQVWNLVDPPDGVKAIKCKWVFKKNTDVDGNVHIYKARLVAKGFRQIQGV 579 Query: 50 DYEETFSPVAMLKSIR 3 DY+ETFSPVAMLKSIR Sbjct: 580 DYDETFSPVAMLKSIR 595 >emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group] Length = 923 Score = 181 bits (459), Expect = 1e-43 Identities = 98/196 (50%), Positives = 128/196 (65%), Gaps = 9/196 (4%) Frame = -2 Query: 563 VARNGVFLESNMLSTKASGSN-DLEEVRETEPQVVASSSDSIQETIPSLERTEEVPQVPQ 387 V R+GVFLE +S K SGS LEE++ET S+ E ++V Q Sbjct: 585 VVRHGVFLEKEFISRKDSGSMVRLEEIQETPENASMSTQPQQAE--------QDVVQEQV 636 Query: 386 QVETTNEAQDPRRSSRKIVPPKRYSYL--------MTENNEPTNYKAALESPDSDKWLEA 231 VE EA RRS R P RY+ L + +N+EPT Y+ + PDS+KWL A Sbjct: 637 VVEPVVEAPSSRRSERTRRTPARYALLTIRQRDILLLDNDEPTTYEETMVGPDSEKWLGA 696 Query: 230 MKTEMDSMSENQVWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQVHGI 51 MK+E++SM NQVW+LVD PDGVK IECKW++K K+D+DGNV +YKA+LVAKG++Q+ G+ Sbjct: 697 MKSEIESMHVNQVWNLVDPPDGVKAIECKWVFKKKIDIDGNVHMYKAQLVAKGFRQIQGV 756 Query: 50 DYEETFSPVAMLKSIR 3 DY+ETFSP+AMLKSIR Sbjct: 757 DYDETFSPIAMLKSIR 772 >gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1248 Score = 179 bits (453), Expect = 5e-43 Identities = 98/196 (50%), Positives = 130/196 (66%), Gaps = 9/196 (4%) Frame = -2 Query: 563 VARNGVFLESNMLSTKASGSN-DLEEVRETEPQVVASSSDSIQETIPSLERTEEVPQVPQ 387 VAR+GVFLE +S K SGS L+E++ET S+ +++ + ++V QV Sbjct: 650 VARHGVFLEKEFISRKDSGSMVRLKEIQETPENASTSTQPQVEQDV-----VQQVEQVV- 703 Query: 386 QVETTNEAQDPRRSSRKIVPPKRYSYL--------MTENNEPTNYKAALESPDSDKWLEA 231 VE EA RRS R P RY+ L + +N+EPT Y+ A+ PD++KWL A Sbjct: 704 -VEPVVEAPASRRSERIRRTPARYALLTSGQRDILLLDNDEPTTYEEAMVGPDTEKWLGA 762 Query: 230 MKTEMDSMSENQVWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQVHGI 51 MK+E++SM NQVW+LVD PDGVK IECKWI+K D+DG V +Y ARLVAKG++Q+ G+ Sbjct: 763 MKSEIESMHVNQVWNLVDPPDGVKAIECKWIFKKMTDVDGTVHIYNARLVAKGFRQIQGV 822 Query: 50 DYEETFSPVAMLKSIR 3 DY+ETFSPVAMLKSIR Sbjct: 823 DYDETFSPVAMLKSIR 838 >gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1161 Score = 179 bits (453), Expect = 5e-43 Identities = 98/196 (50%), Positives = 130/196 (66%), Gaps = 9/196 (4%) Frame = -2 Query: 563 VARNGVFLESNMLSTKASGSN-DLEEVRETEPQVVASSSDSIQETIPSLERTEEVPQVPQ 387 VAR+GVFLE +S K SGS L+E++ET S+ +++ + ++V QV Sbjct: 563 VARHGVFLEKEFISRKDSGSMVRLKEIQETPENASTSTQPQVEQDV-----VQQVEQVV- 616 Query: 386 QVETTNEAQDPRRSSRKIVPPKRYSYL--------MTENNEPTNYKAALESPDSDKWLEA 231 VE EA RRS R P RY+ L + +N+EPT Y+ A+ PD++KWL A Sbjct: 617 -VEPVVEAPASRRSERIRRTPARYALLTSGQRDILLLDNDEPTTYEEAMVGPDTEKWLGA 675 Query: 230 MKTEMDSMSENQVWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQVHGI 51 MK+E++SM NQVW+LVD PDGVK IECKWI+K D+DG V +Y ARLVAKG++Q+ G+ Sbjct: 676 MKSEIESMHVNQVWNLVDPPDGVKAIECKWIFKKMTDVDGTVHIYNARLVAKGFRQIQGV 735 Query: 50 DYEETFSPVAMLKSIR 3 DY+ETFSPVAMLKSIR Sbjct: 736 DYDETFSPVAMLKSIR 751 >gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1745 Score = 177 bits (448), Expect = 2e-42 Identities = 99/196 (50%), Positives = 133/196 (67%), Gaps = 9/196 (4%) Frame = -2 Query: 563 VARNGVFLESNMLSTKASGSN-DLEEVRETEPQVVASSSDSIQETIPSLERTEEVPQVPQ 387 VAR+GVFL+ +S K SGS LEE++ET P+ ++S+ Q +++ E+V Sbjct: 1186 VARHGVFLKKEFISRKDSGSIVRLEEIQET-PENASTSTQPQQAEQDVVQQVEQVV---- 1240 Query: 386 QVETTNEAQDPRRSSRKIVPPKRYSYL--------MTENNEPTNYKAALESPDSDKWLEA 231 VE EA RRS R P RY+ L + +N+EPT Y+ A+ PDS+KW A Sbjct: 1241 -VEPVVEAPASRRSERIRRTPARYALLTIGQRDILLLDNDEPTTYEEAMVGPDSEKWPGA 1299 Query: 230 MKTEMDSMSENQVWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQVHGI 51 MK+E++SM NQVW+LVD PDGVK IECKW++K K +DGNV +YKARLVAKG++Q+ G+ Sbjct: 1300 MKSEIESMHVNQVWNLVDPPDGVKAIECKWVFKKKTYVDGNVHIYKARLVAKGFRQIQGV 1359 Query: 50 DYEETFSPVAMLKSIR 3 DY+ETFSPVAMLKSI+ Sbjct: 1360 DYDETFSPVAMLKSIQ 1375 >gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 829 Score = 174 bits (441), Expect = 1e-41 Identities = 95/188 (50%), Positives = 121/188 (64%), Gaps = 1/188 (0%) Frame = -2 Query: 563 VARNGVFLESNMLSTKASGSN-DLEEVRETEPQVVASSSDSIQETIPSLERTEEVPQVPQ 387 VAR+GVFLE +S K SGS LEE++ET+ S+ PQ Sbjct: 511 VARHGVFLEKEFISRKDSGSMVRLEEIQETQENASTSTQ-------------------PQ 551 Query: 386 QVETTNEAQDPRRSSRKIVPPKRYSYLMTENNEPTNYKAALESPDSDKWLEAMKTEMDSM 207 Q E QD + R PK Y + +++EPT Y A+ PDS+KWL AMK+E++SM Sbjct: 552 QAE-----QDVVQQHRFHEGPKGYGVHLRDDDEPTTYVEAMVGPDSEKWLGAMKSEIESM 606 Query: 206 SENQVWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQVHGIDYEETFSP 27 NQVW+LVD PDGVK IECKW++K K D+DGNV +YKARLVAKG++Q+ G+DY+ETFSP Sbjct: 607 HVNQVWNLVDPPDGVKAIECKWVFKKKTDVDGNVHIYKARLVAKGFRQIQGVDYDETFSP 666 Query: 26 VAMLKSIR 3 AMLKSIR Sbjct: 667 FAMLKSIR 674 >gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 932 Score = 173 bits (439), Expect = 2e-41 Identities = 98/196 (50%), Positives = 130/196 (66%), Gaps = 9/196 (4%) Frame = -2 Query: 563 VARNGVFLESNMLSTKASGSN-DLEEVRETEPQVVASSSDSIQETIPSLERTEEVPQVPQ 387 VAR+ VFLE +STK SG LEE++ET P+ ++S+ Q+ +++ E+V Sbjct: 381 VARHDVFLEKEFISTKDSGIMVRLEEIQET-PKNASTSTQPQQDEQDVVQQVEQVV---- 435 Query: 386 QVETTNEAQDPRRSSRKIVPPKRYSYLMT--------ENNEPTNYKAALESPDSDKWLEA 231 VE EA RRS R P RY+ L T +N++PT Y+ A+ PDS KWL A Sbjct: 436 -VEPVVEAPASRRSERIWRTPARYALLTTGQRDILLLDNDKPTTYEEAMVGPDSKKWLGA 494 Query: 230 MKTEMDSMSENQVWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQVHGI 51 MK+E++SM NQVW+LVD PDGVK IECKW++K K D+DGNV +YKARLVAKG++Q+ + Sbjct: 495 MKSEIESMHVNQVWNLVDPPDGVKGIECKWVFKKKTDLDGNVHIYKARLVAKGFRQIQSV 554 Query: 50 DYEETFSPVAMLKSIR 3 DY+ TFS V MLKSIR Sbjct: 555 DYDGTFSSVGMLKSIR 570 >gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Japonica Group] Length = 700 Score = 170 bits (431), Expect = 2e-40 Identities = 97/195 (49%), Positives = 123/195 (63%), Gaps = 8/195 (4%) Frame = -2 Query: 563 VARNGVFLESNMLSTKASGSNDLEEVRETEPQVVASSSDSIQETIPSLERTEEVPQVPQQ 384 VAR+GVFLE +S K SGS + E T Q + D +Q+ V QV Sbjct: 261 VARHGVFLEKKFISRKDSGSMETPENASTSTQPQQAEQDVVQQ----------VEQVV-- 308 Query: 383 VETTNEAQDPRRSSRKIVPPKRYSYLMTE--------NNEPTNYKAALESPDSDKWLEAM 228 VE EA RRS R P RY+ L T N+EPT Y+ A+ P S+KWL AM Sbjct: 309 VEPVVEAPASRRSERIRRTPARYALLTTGQCDILLLGNDEPTTYEEAMVGPGSEKWLGAM 368 Query: 227 KTEMDSMSENQVWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQVHGID 48 K++++SM NQVW+LVD D VK IECKW++K K D+DGNV +YKARLVAKG++Q+ G++ Sbjct: 369 KSKIESMHVNQVWNLVDPLDSVKAIECKWVFKKKTDVDGNVHIYKARLVAKGFRQIQGVN 428 Query: 47 YEETFSPVAMLKSIR 3 Y+ETFSPVAMLKSIR Sbjct: 429 YDETFSPVAMLKSIR 443 >gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis] Length = 1313 Score = 168 bits (426), Expect = 7e-40 Identities = 83/129 (64%), Positives = 101/129 (78%), Gaps = 2/129 (1%) Frame = -2 Query: 383 VETTNEAQDPRRSSRKIVPPKRYSY--LMTENNEPTNYKAALESPDSDKWLEAMKTEMDS 210 VE +EA PRRS R P RY++ L+ N+EP YK A+ PDS+KWL AMK+E+DS Sbjct: 757 VEPVDEASAPRRSKRPCQMPIRYAHDILLLNNDEPNTYKEAMMDPDSEKWLGAMKSEIDS 816 Query: 209 MSENQVWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQVHGIDYEETFS 30 M +NQVW+LVD DGVK IECKWIYK K+DMDGNV ++KARLVAKG++QV G+DY+ETFS Sbjct: 817 MRDNQVWNLVDPLDGVKTIECKWIYKKKIDMDGNVHIHKARLVAKGFRQVQGVDYDETFS 876 Query: 29 PVAMLKSIR 3 VAMLKSIR Sbjct: 877 LVAMLKSIR 885 >ref|XP_004978922.1| PREDICTED: uncharacterized protein LOC101776990, partial [Setaria italica] Length = 1686 Score = 158 bits (400), Expect = 8e-37 Identities = 76/131 (58%), Positives = 95/131 (72%) Frame = -2 Query: 395 VPQQVETTNEAQDPRRSSRKIVPPKRYSYLMTENNEPTNYKAALESPDSDKWLEAMKTEM 216 V +QVE + P + R + L+ +N+EP Y A+ PDSDKW AM++E+ Sbjct: 170 VAEQVEIPMAREAPPQPRRSARLREMREILLLDNDEPVTYAEAMMDPDSDKWQSAMQSEI 229 Query: 215 DSMSENQVWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQVHGIDYEET 36 +SM +NQVW+LVD PDGVK IECKWIYK K DMDGNV +YKARLVAKG++QV G+DY+ET Sbjct: 230 ESMGDNQVWNLVDPPDGVKAIECKWIYKKKKDMDGNVHIYKARLVAKGFRQVQGVDYDET 289 Query: 35 FSPVAMLKSIR 3 FSPV MLKSIR Sbjct: 290 FSPVVMLKSIR 300 >gb|EMS50467.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Triticum urartu] Length = 1808 Score = 155 bits (393), Expect = 5e-36 Identities = 91/188 (48%), Positives = 116/188 (61%), Gaps = 1/188 (0%) Frame = -2 Query: 563 VARNGVFLESNMLSTKASGSN-DLEEVRETEPQVVASSSDSIQETIPSLERTEEVPQVPQ 387 VA+NG FLE LS + SG +L+EV P + +SSS + VP +P Sbjct: 1302 VAKNGSFLEKECLSKEVSGRKVELDEVIVPSPLLESSSS------------LKSVPVIPA 1349 Query: 386 QVETTNEAQDPRRSSRKIVPPKRYSYLMTENNEPTNYKAALESPDSDKWLEAMKTEMDSM 207 V D S + P ++ +++EPTNY+ A+ SP S KWLE MK+EM SM Sbjct: 1350 PVSEEANDDDHETSDQVTAEP----VMLLDHDEPTNYEEAMMSPYSAKWLEDMKSEMGSM 1405 Query: 206 SENQVWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQVHGIDYEETFSP 27 EN+V LVDL D + IE KWI+K K+D DGN IVYKARLVAKG++QV G+DY ETFSP Sbjct: 1406 YENKVCTLVDLLDDHQAIENKWIFKKKIDADGNAIVYKARLVAKGFRQVQGVDYGETFSP 1465 Query: 26 VAMLKSIR 3 VAMLKS+R Sbjct: 1466 VAMLKSVR 1473 >gb|EMT06479.1| hypothetical protein F775_22266 [Aegilops tauschii] Length = 898 Score = 155 bits (391), Expect = 8e-36 Identities = 78/124 (62%), Positives = 96/124 (77%), Gaps = 5/124 (4%) Frame = -2 Query: 359 DPRRSSRKIVPPKRYS-----YLMTENNEPTNYKAALESPDSDKWLEAMKTEMDSMSENQ 195 +PRRS+R P+ Y ++ +++EPTNY+ A+ S DS KWLEAMK+EM SM EN+ Sbjct: 724 EPRRSTRLRSAPEWYGNPVLEVMLIDHDEPTNYEEAMVSLDSAKWLEAMKSEMGSMYENK 783 Query: 194 VWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQVHGIDYEETFSPVAML 15 VW LVDLPDG + IE KWI+K K D DGNV VYKARLVAKG++QV GIDY+ETFSPVAML Sbjct: 784 VWTLVDLPDGRQAIENKWIFKKKTDADGNVTVYKARLVAKGFRQVQGIDYDETFSPVAML 843 Query: 14 KSIR 3 KS+R Sbjct: 844 KSVR 847 >gb|AAX96621.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa Japonica Group] gi|77550176|gb|ABA92973.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 591 Score = 149 bits (375), Expect = 6e-34 Identities = 65/102 (63%), Positives = 85/102 (83%) Frame = -2 Query: 308 LMTENNEPTNYKAALESPDSDKWLEAMKTEMDSMSENQVWDLVDLPDGVKPIECKWIYKI 129 L+ +N+EPT Y+ + PDS+KWL AMK+E++SM NQ+W+LVD PDGVK IECKW++K Sbjct: 421 LLLDNDEPTTYEETMVGPDSEKWLGAMKSEIESMHVNQIWNLVDPPDGVKAIECKWVFKK 480 Query: 128 KLDMDGNVIVYKARLVAKGYKQVHGIDYEETFSPVAMLKSIR 3 K D+DGNV +YK RLVAK Y+Q+ G+DY+ETFSPVAMLKSI+ Sbjct: 481 KTDVDGNVHIYKIRLVAKSYRQIQGVDYDETFSPVAMLKSIQ 522 >gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1073 Score = 149 bits (375), Expect = 6e-34 Identities = 68/108 (62%), Positives = 88/108 (81%) Frame = -2 Query: 326 PKRYSYLMTENNEPTNYKAALESPDSDKWLEAMKTEMDSMSENQVWDLVDLPDGVKPIEC 147 PK Y + +N++PT Y+ A+ DS+K L AMK+E++SM NQVW+LVD PDGVK IEC Sbjct: 712 PKEYDVHLRDNDKPTTYEEAMVGLDSEKCLGAMKSEIESMHVNQVWNLVDPPDGVKAIEC 771 Query: 146 KWIYKIKLDMDGNVIVYKARLVAKGYKQVHGIDYEETFSPVAMLKSIR 3 KW++K K D+DGNV +YKARLVAKG++Q+ G+DY+ETFSPVAMLKSIR Sbjct: 772 KWVFKKKTDVDGNVHIYKARLVAKGFRQIQGVDYDETFSPVAMLKSIR 819 >emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera] Length = 633 Score = 145 bits (367), Expect = 5e-33 Identities = 85/160 (53%), Positives = 98/160 (61%), Gaps = 11/160 (6%) Frame = -2 Query: 449 DSIQETIPSLERTEEVPQVPQQVETTNEAQDP---RRSSRKIVPPKRYSYLMTE------ 297 D +Q+ +P + + PQQ E A P RRS R PP RY+ L Sbjct: 49 DEVQDVVPPVINLXALQ--PQQBEGV--AXQPVVLRRSGRTRRPPVRYTXLGEAFDRIPE 104 Query: 296 --NNEPTNYKAALESPDSDKWLEAMKTEMDSMSENQVWDLVDLPDGVKPIECKWIYKIKL 123 N EP Y AL+ D+DKWL AMK+EM+SM NQVW+LV+ P GVKPI CKWIYK K Sbjct: 105 EVNTEPVCYDDALQDKDADKWLVAMKSEMESMYSNQVWELVEPPKGVKPIGCKWIYKKKR 164 Query: 122 DMDGNVIVYKARLVAKGYKQVHGIDYEETFSPVAMLKSIR 3 +DG YKA LVAKGY Q GIDYEETFSPVAMLKSIR Sbjct: 165 GIDGKXZTYKAXLVAKGYTQKEGIDYEETFSPVAMLKSIR 204 >gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 655 Score = 144 bits (364), Expect = 1e-32 Identities = 66/108 (61%), Positives = 86/108 (79%) Frame = -2 Query: 326 PKRYSYLMTENNEPTNYKAALESPDSDKWLEAMKTEMDSMSENQVWDLVDLPDGVKPIEC 147 PK Y + N+EPT Y+ A+ P S+KWL AMK++++SM NQVW+LVD D VK IEC Sbjct: 291 PKGYGVHLRGNDEPTTYEEAMVGPGSEKWLGAMKSKIESMHVNQVWNLVDPLDSVKAIEC 350 Query: 146 KWIYKIKLDMDGNVIVYKARLVAKGYKQVHGIDYEETFSPVAMLKSIR 3 KW++K K D+DGNV +YKARLVAKG++Q+ G++Y+ETFSPVAMLKSIR Sbjct: 351 KWVFKKKTDVDGNVHIYKARLVAKGFRQIQGVNYDETFSPVAMLKSIR 398 >gb|ADJ18449.1| gag/pol protein [Bryonia dioica] Length = 1292 Score = 142 bits (359), Expect = 4e-32 Identities = 74/139 (53%), Positives = 87/139 (62%), Gaps = 8/139 (5%) Frame = -2 Query: 395 VPQQVETTNEAQDPRRSSRKIVPPKRYSYLMTEN--------NEPTNYKAALESPDSDKW 240 + Q T+ E + PRRS R + P RY L+ +P YK A+ D D+W Sbjct: 761 ISDQSHTSQELRVPRRSGRVVHQPNRYLGLVETQIIIPDDGVEDPLTYKQAMNDVDRDQW 820 Query: 239 LEAMKTEMDSMSENQVWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQV 60 ++AM EM+SM N VW LVDLP VKPI CKWIYK K D G V +KARLVAKGY Q Sbjct: 821 IKAMNLEMESMYFNSVWTLVDLPSDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQK 880 Query: 59 HGIDYEETFSPVAMLKSIR 3 G+DYEETFSPVAMLKSIR Sbjct: 881 EGVDYEETFSPVAMLKSIR 899 >gb|EXC18499.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus notabilis] Length = 414 Score = 140 bits (353), Expect = 2e-31 Identities = 88/196 (44%), Positives = 112/196 (57%), Gaps = 9/196 (4%) Frame = -2 Query: 563 VARNGVFLESN-MLSTKASGSNDLEEVRETE--PQVVASSSDSIQETIPSLERTEEVPQV 393 V+ N FLE + M+ K LEE+ E PQ Q+TI V Sbjct: 197 VSTNATFLEHDYMIDFKPRSKIVLEELLSDEIRPQPTRVVGPLRQKTI-----------V 245 Query: 392 PQQVETTNEAQDPRRSSRKIVPPKRYS---YLMTENN---EPTNYKAALESPDSDKWLEA 231 P Q PRRS R P RY+ ++T ++ +P+ ++ A++ + ++W A Sbjct: 246 PDQT-----LMAPRRSRRVSRLPDRYTGEAQIVTADDGKEDPSTFRDAMDDSNKEEWQAA 300 Query: 230 MKTEMDSMSENQVWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQVHGI 51 MK E++SM N VW LVDLP+GVKPI CKWIYK K +DG V YKARLVAKGY Q G+ Sbjct: 301 MKLEIESMHSNSVWQLVDLPEGVKPIRCKWIYKRKRGVDGKVETYKARLVAKGYTQKEGV 360 Query: 50 DYEETFSPVAMLKSIR 3 DYEETFSPVAMLKSIR Sbjct: 361 DYEETFSPVAMLKSIR 376