BLASTX nr result

ID: Achyranthes22_contig00062708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00062708
         (564 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   192   5e-47
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     182   4e-44
gb|ABA97705.1| retrotransposon protein, putative, Ty1-copia subc...   181   1e-43
emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]         181   1e-43
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...   179   5e-43
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]     179   5e-43
gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subc...   177   2e-42
gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc...   174   1e-41
gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subc...   173   2e-41
gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Ja...   170   2e-40
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...   168   7e-40
ref|XP_004978922.1| PREDICTED: uncharacterized protein LOC101776...   158   8e-37
gb|EMS50467.1| Retrovirus-related Pol polyprotein from transposo...   155   5e-36
gb|EMT06479.1| hypothetical protein F775_22266 [Aegilops tauschii]    155   8e-36
gb|AAX96621.1| retrotransposon protein, putative, Ty1-copia sub-...   149   6e-34
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc...   149   6e-34
emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]   145   5e-33
gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subc...   144   1e-32
gb|ADJ18449.1| gag/pol protein [Bryonia dioica]                       142   4e-32
gb|EXC18499.1| Retrovirus-related Pol polyprotein from transposo...   140   2e-31

>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
           19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
           putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  192 bits (488), Expect = 5e-47
 Identities = 110/196 (56%), Positives = 129/196 (65%), Gaps = 9/196 (4%)
 Frame = -2

Query: 563 VARNGVFLESNMLSTKASGSNDL-EEVRETEPQVVASSSDSIQETIPSLERTEEVPQVPQ 387
           V RNG FLE   LS   SGS  L EEVRE +  V  S     +E    L R  E   V  
Sbjct: 354 VVRNGAFLEREFLSKGTSGSKVLLEEVREPQGDVPTSQ----EEHQLDLRRVVEPILVEP 409

Query: 386 QVETTNEAQDPRRSSRKIVPPKRY--------SYLMTENNEPTNYKAALESPDSDKWLEA 231
           +V         RRS R    P R+        +  M E++EPT+Y+ AL  PDSDKWLEA
Sbjct: 410 EV---------RRSERSRHEPDRFRDWVMDDHALFMIESDEPTSYEEALMGPDSDKWLEA 460

Query: 230 MKTEMDSMSENQVWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQVHGI 51
            K+EM+SMS+N+VW LVDLPDGVKPIECKWI+K K+DMDGN+ +YKA LVAKGYKQVHGI
Sbjct: 461 AKSEMESMSQNKVWTLVDLPDGVKPIECKWIFKKKIDMDGNIQIYKAGLVAKGYKQVHGI 520

Query: 50  DYEETFSPVAMLKSIR 3
           DY+ET+SPVAMLKSIR
Sbjct: 521 DYDETYSPVAMLKSIR 536


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  182 bits (463), Expect = 4e-44
 Identities = 102/194 (52%), Positives = 132/194 (68%), Gaps = 7/194 (3%)
 Frame = -2

Query: 563  VARNGVFLESNMLSTKASGSN-DLEEVRETEPQVVASSSDSIQETIPSLERTEEVPQVPQ 387
            VAR+GVFLE   LS + SG    LEEV+ET P+ V+++++  QE         +    P 
Sbjct: 710  VARHGVFLEKEFLSRRVSGIRVHLEEVQET-PETVSATTEPQQE---------DQSVAPP 759

Query: 386  QVETTNEAQDPRRSSRKIVPPKRYS------YLMTENNEPTNYKAALESPDSDKWLEAMK 225
             V+T      PRRS R    P RY+       L+ +N+EP  Y+ A+   DS+KWL AMK
Sbjct: 760  VVDTPA----PRRSERSRRAPDRYTGAEQRDILLLDNDEPKTYEEAMVGHDSNKWLGAMK 815

Query: 224  TEMDSMSENQVWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQVHGIDY 45
            +E++SM +NQVW+LVD PDGVK IECKW++K K DMDGNV +YKARLVAKG+KQ+ G+DY
Sbjct: 816  SEIESMYDNQVWNLVDPPDGVKTIECKWLFKKKADMDGNVHIYKARLVAKGFKQIQGVDY 875

Query: 44   EETFSPVAMLKSIR 3
            +ETFSPVAMLKSIR
Sbjct: 876  DETFSPVAMLKSIR 889


>gb|ABA97705.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 810

 Score =  181 bits (459), Expect = 1e-43
 Identities = 101/196 (51%), Positives = 134/196 (68%), Gaps = 9/196 (4%)
 Frame = -2

Query: 563 VARNGVFLESNMLSTKASGSN-DLEEVRETEPQVVASSSDSIQETIPSLERTEEVPQVPQ 387
           VAR+GVFLE   +S K SGS   LEE++ET P+  ++S+   Q     +++ E+V     
Sbjct: 406 VARHGVFLEKEFISRKDSGSMVRLEEIQET-PENASTSTQPQQAEQDVVQQVEQVV---- 460

Query: 386 QVETTNEAQDPRRSSRKIVPPKRYSYLMT--------ENNEPTNYKAALESPDSDKWLEA 231
            VE   EA   RRS R    P RY+ L T        +N+EPT Y+ A+  PDS+KWL A
Sbjct: 461 -VEPVVEALASRRSKRIRRTPARYALLTTGQRDILLLDNDEPTIYEEAMVGPDSEKWLGA 519

Query: 230 MKTEMDSMSENQVWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQVHGI 51
           MK++++SM  NQVW+LVD PDGVK I+CKW++K   D+DGNV +YKARLVAKG++Q+ G+
Sbjct: 520 MKSKIESMHVNQVWNLVDPPDGVKAIKCKWVFKKNTDVDGNVHIYKARLVAKGFRQIQGV 579

Query: 50  DYEETFSPVAMLKSIR 3
           DY+ETFSPVAMLKSIR
Sbjct: 580 DYDETFSPVAMLKSIR 595


>emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]
          Length = 923

 Score =  181 bits (459), Expect = 1e-43
 Identities = 98/196 (50%), Positives = 128/196 (65%), Gaps = 9/196 (4%)
 Frame = -2

Query: 563  VARNGVFLESNMLSTKASGSN-DLEEVRETEPQVVASSSDSIQETIPSLERTEEVPQVPQ 387
            V R+GVFLE   +S K SGS   LEE++ET      S+     E        ++V Q   
Sbjct: 585  VVRHGVFLEKEFISRKDSGSMVRLEEIQETPENASMSTQPQQAE--------QDVVQEQV 636

Query: 386  QVETTNEAQDPRRSSRKIVPPKRYSYL--------MTENNEPTNYKAALESPDSDKWLEA 231
             VE   EA   RRS R    P RY+ L        + +N+EPT Y+  +  PDS+KWL A
Sbjct: 637  VVEPVVEAPSSRRSERTRRTPARYALLTIRQRDILLLDNDEPTTYEETMVGPDSEKWLGA 696

Query: 230  MKTEMDSMSENQVWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQVHGI 51
            MK+E++SM  NQVW+LVD PDGVK IECKW++K K+D+DGNV +YKA+LVAKG++Q+ G+
Sbjct: 697  MKSEIESMHVNQVWNLVDPPDGVKAIECKWVFKKKIDIDGNVHMYKAQLVAKGFRQIQGV 756

Query: 50   DYEETFSPVAMLKSIR 3
            DY+ETFSP+AMLKSIR
Sbjct: 757  DYDETFSPIAMLKSIR 772


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1248

 Score =  179 bits (453), Expect = 5e-43
 Identities = 98/196 (50%), Positives = 130/196 (66%), Gaps = 9/196 (4%)
 Frame = -2

Query: 563  VARNGVFLESNMLSTKASGSN-DLEEVRETEPQVVASSSDSIQETIPSLERTEEVPQVPQ 387
            VAR+GVFLE   +S K SGS   L+E++ET      S+   +++ +      ++V QV  
Sbjct: 650  VARHGVFLEKEFISRKDSGSMVRLKEIQETPENASTSTQPQVEQDV-----VQQVEQVV- 703

Query: 386  QVETTNEAQDPRRSSRKIVPPKRYSYL--------MTENNEPTNYKAALESPDSDKWLEA 231
             VE   EA   RRS R    P RY+ L        + +N+EPT Y+ A+  PD++KWL A
Sbjct: 704  -VEPVVEAPASRRSERIRRTPARYALLTSGQRDILLLDNDEPTTYEEAMVGPDTEKWLGA 762

Query: 230  MKTEMDSMSENQVWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQVHGI 51
            MK+E++SM  NQVW+LVD PDGVK IECKWI+K   D+DG V +Y ARLVAKG++Q+ G+
Sbjct: 763  MKSEIESMHVNQVWNLVDPPDGVKAIECKWIFKKMTDVDGTVHIYNARLVAKGFRQIQGV 822

Query: 50   DYEETFSPVAMLKSIR 3
            DY+ETFSPVAMLKSIR
Sbjct: 823  DYDETFSPVAMLKSIR 838


>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score =  179 bits (453), Expect = 5e-43
 Identities = 98/196 (50%), Positives = 130/196 (66%), Gaps = 9/196 (4%)
 Frame = -2

Query: 563  VARNGVFLESNMLSTKASGSN-DLEEVRETEPQVVASSSDSIQETIPSLERTEEVPQVPQ 387
            VAR+GVFLE   +S K SGS   L+E++ET      S+   +++ +      ++V QV  
Sbjct: 563  VARHGVFLEKEFISRKDSGSMVRLKEIQETPENASTSTQPQVEQDV-----VQQVEQVV- 616

Query: 386  QVETTNEAQDPRRSSRKIVPPKRYSYL--------MTENNEPTNYKAALESPDSDKWLEA 231
             VE   EA   RRS R    P RY+ L        + +N+EPT Y+ A+  PD++KWL A
Sbjct: 617  -VEPVVEAPASRRSERIRRTPARYALLTSGQRDILLLDNDEPTTYEEAMVGPDTEKWLGA 675

Query: 230  MKTEMDSMSENQVWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQVHGI 51
            MK+E++SM  NQVW+LVD PDGVK IECKWI+K   D+DG V +Y ARLVAKG++Q+ G+
Sbjct: 676  MKSEIESMHVNQVWNLVDPPDGVKAIECKWIFKKMTDVDGTVHIYNARLVAKGFRQIQGV 735

Query: 50   DYEETFSPVAMLKSIR 3
            DY+ETFSPVAMLKSIR
Sbjct: 736  DYDETFSPVAMLKSIR 751


>gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1745

 Score =  177 bits (448), Expect = 2e-42
 Identities = 99/196 (50%), Positives = 133/196 (67%), Gaps = 9/196 (4%)
 Frame = -2

Query: 563  VARNGVFLESNMLSTKASGSN-DLEEVRETEPQVVASSSDSIQETIPSLERTEEVPQVPQ 387
            VAR+GVFL+   +S K SGS   LEE++ET P+  ++S+   Q     +++ E+V     
Sbjct: 1186 VARHGVFLKKEFISRKDSGSIVRLEEIQET-PENASTSTQPQQAEQDVVQQVEQVV---- 1240

Query: 386  QVETTNEAQDPRRSSRKIVPPKRYSYL--------MTENNEPTNYKAALESPDSDKWLEA 231
             VE   EA   RRS R    P RY+ L        + +N+EPT Y+ A+  PDS+KW  A
Sbjct: 1241 -VEPVVEAPASRRSERIRRTPARYALLTIGQRDILLLDNDEPTTYEEAMVGPDSEKWPGA 1299

Query: 230  MKTEMDSMSENQVWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQVHGI 51
            MK+E++SM  NQVW+LVD PDGVK IECKW++K K  +DGNV +YKARLVAKG++Q+ G+
Sbjct: 1300 MKSEIESMHVNQVWNLVDPPDGVKAIECKWVFKKKTYVDGNVHIYKARLVAKGFRQIQGV 1359

Query: 50   DYEETFSPVAMLKSIR 3
            DY+ETFSPVAMLKSI+
Sbjct: 1360 DYDETFSPVAMLKSIQ 1375


>gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 829

 Score =  174 bits (441), Expect = 1e-41
 Identities = 95/188 (50%), Positives = 121/188 (64%), Gaps = 1/188 (0%)
 Frame = -2

Query: 563  VARNGVFLESNMLSTKASGSN-DLEEVRETEPQVVASSSDSIQETIPSLERTEEVPQVPQ 387
            VAR+GVFLE   +S K SGS   LEE++ET+     S+                    PQ
Sbjct: 511  VARHGVFLEKEFISRKDSGSMVRLEEIQETQENASTSTQ-------------------PQ 551

Query: 386  QVETTNEAQDPRRSSRKIVPPKRYSYLMTENNEPTNYKAALESPDSDKWLEAMKTEMDSM 207
            Q E     QD  +  R    PK Y   + +++EPT Y  A+  PDS+KWL AMK+E++SM
Sbjct: 552  QAE-----QDVVQQHRFHEGPKGYGVHLRDDDEPTTYVEAMVGPDSEKWLGAMKSEIESM 606

Query: 206  SENQVWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQVHGIDYEETFSP 27
              NQVW+LVD PDGVK IECKW++K K D+DGNV +YKARLVAKG++Q+ G+DY+ETFSP
Sbjct: 607  HVNQVWNLVDPPDGVKAIECKWVFKKKTDVDGNVHIYKARLVAKGFRQIQGVDYDETFSP 666

Query: 26   VAMLKSIR 3
             AMLKSIR
Sbjct: 667  FAMLKSIR 674


>gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 932

 Score =  173 bits (439), Expect = 2e-41
 Identities = 98/196 (50%), Positives = 130/196 (66%), Gaps = 9/196 (4%)
 Frame = -2

Query: 563 VARNGVFLESNMLSTKASGSN-DLEEVRETEPQVVASSSDSIQETIPSLERTEEVPQVPQ 387
           VAR+ VFLE   +STK SG    LEE++ET P+  ++S+   Q+    +++ E+V     
Sbjct: 381 VARHDVFLEKEFISTKDSGIMVRLEEIQET-PKNASTSTQPQQDEQDVVQQVEQVV---- 435

Query: 386 QVETTNEAQDPRRSSRKIVPPKRYSYLMT--------ENNEPTNYKAALESPDSDKWLEA 231
            VE   EA   RRS R    P RY+ L T        +N++PT Y+ A+  PDS KWL A
Sbjct: 436 -VEPVVEAPASRRSERIWRTPARYALLTTGQRDILLLDNDKPTTYEEAMVGPDSKKWLGA 494

Query: 230 MKTEMDSMSENQVWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQVHGI 51
           MK+E++SM  NQVW+LVD PDGVK IECKW++K K D+DGNV +YKARLVAKG++Q+  +
Sbjct: 495 MKSEIESMHVNQVWNLVDPPDGVKGIECKWVFKKKTDLDGNVHIYKARLVAKGFRQIQSV 554

Query: 50  DYEETFSPVAMLKSIR 3
           DY+ TFS V MLKSIR
Sbjct: 555 DYDGTFSSVGMLKSIR 570


>gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Japonica Group]
          Length = 700

 Score =  170 bits (431), Expect = 2e-40
 Identities = 97/195 (49%), Positives = 123/195 (63%), Gaps = 8/195 (4%)
 Frame = -2

Query: 563 VARNGVFLESNMLSTKASGSNDLEEVRETEPQVVASSSDSIQETIPSLERTEEVPQVPQQ 384
           VAR+GVFLE   +S K SGS +  E   T  Q   +  D +Q+          V QV   
Sbjct: 261 VARHGVFLEKKFISRKDSGSMETPENASTSTQPQQAEQDVVQQ----------VEQVV-- 308

Query: 383 VETTNEAQDPRRSSRKIVPPKRYSYLMTE--------NNEPTNYKAALESPDSDKWLEAM 228
           VE   EA   RRS R    P RY+ L T         N+EPT Y+ A+  P S+KWL AM
Sbjct: 309 VEPVVEAPASRRSERIRRTPARYALLTTGQCDILLLGNDEPTTYEEAMVGPGSEKWLGAM 368

Query: 227 KTEMDSMSENQVWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQVHGID 48
           K++++SM  NQVW+LVD  D VK IECKW++K K D+DGNV +YKARLVAKG++Q+ G++
Sbjct: 369 KSKIESMHVNQVWNLVDPLDSVKAIECKWVFKKKTDVDGNVHIYKARLVAKGFRQIQGVN 428

Query: 47  YEETFSPVAMLKSIR 3
           Y+ETFSPVAMLKSIR
Sbjct: 429 YDETFSPVAMLKSIR 443


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  168 bits (426), Expect = 7e-40
 Identities = 83/129 (64%), Positives = 101/129 (78%), Gaps = 2/129 (1%)
 Frame = -2

Query: 383  VETTNEAQDPRRSSRKIVPPKRYSY--LMTENNEPTNYKAALESPDSDKWLEAMKTEMDS 210
            VE  +EA  PRRS R    P RY++  L+  N+EP  YK A+  PDS+KWL AMK+E+DS
Sbjct: 757  VEPVDEASAPRRSKRPCQMPIRYAHDILLLNNDEPNTYKEAMMDPDSEKWLGAMKSEIDS 816

Query: 209  MSENQVWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQVHGIDYEETFS 30
            M +NQVW+LVD  DGVK IECKWIYK K+DMDGNV ++KARLVAKG++QV G+DY+ETFS
Sbjct: 817  MRDNQVWNLVDPLDGVKTIECKWIYKKKIDMDGNVHIHKARLVAKGFRQVQGVDYDETFS 876

Query: 29   PVAMLKSIR 3
             VAMLKSIR
Sbjct: 877  LVAMLKSIR 885


>ref|XP_004978922.1| PREDICTED: uncharacterized protein LOC101776990, partial [Setaria
           italica]
          Length = 1686

 Score =  158 bits (400), Expect = 8e-37
 Identities = 76/131 (58%), Positives = 95/131 (72%)
 Frame = -2

Query: 395 VPQQVETTNEAQDPRRSSRKIVPPKRYSYLMTENNEPTNYKAALESPDSDKWLEAMKTEM 216
           V +QVE     + P +  R     +    L+ +N+EP  Y  A+  PDSDKW  AM++E+
Sbjct: 170 VAEQVEIPMAREAPPQPRRSARLREMREILLLDNDEPVTYAEAMMDPDSDKWQSAMQSEI 229

Query: 215 DSMSENQVWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQVHGIDYEET 36
           +SM +NQVW+LVD PDGVK IECKWIYK K DMDGNV +YKARLVAKG++QV G+DY+ET
Sbjct: 230 ESMGDNQVWNLVDPPDGVKAIECKWIYKKKKDMDGNVHIYKARLVAKGFRQVQGVDYDET 289

Query: 35  FSPVAMLKSIR 3
           FSPV MLKSIR
Sbjct: 290 FSPVVMLKSIR 300


>gb|EMS50467.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Triticum
            urartu]
          Length = 1808

 Score =  155 bits (393), Expect = 5e-36
 Identities = 91/188 (48%), Positives = 116/188 (61%), Gaps = 1/188 (0%)
 Frame = -2

Query: 563  VARNGVFLESNMLSTKASGSN-DLEEVRETEPQVVASSSDSIQETIPSLERTEEVPQVPQ 387
            VA+NG FLE   LS + SG   +L+EV    P + +SSS             + VP +P 
Sbjct: 1302 VAKNGSFLEKECLSKEVSGRKVELDEVIVPSPLLESSSS------------LKSVPVIPA 1349

Query: 386  QVETTNEAQDPRRSSRKIVPPKRYSYLMTENNEPTNYKAALESPDSDKWLEAMKTEMDSM 207
             V       D   S +    P     ++ +++EPTNY+ A+ SP S KWLE MK+EM SM
Sbjct: 1350 PVSEEANDDDHETSDQVTAEP----VMLLDHDEPTNYEEAMMSPYSAKWLEDMKSEMGSM 1405

Query: 206  SENQVWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQVHGIDYEETFSP 27
             EN+V  LVDL D  + IE KWI+K K+D DGN IVYKARLVAKG++QV G+DY ETFSP
Sbjct: 1406 YENKVCTLVDLLDDHQAIENKWIFKKKIDADGNAIVYKARLVAKGFRQVQGVDYGETFSP 1465

Query: 26   VAMLKSIR 3
            VAMLKS+R
Sbjct: 1466 VAMLKSVR 1473


>gb|EMT06479.1| hypothetical protein F775_22266 [Aegilops tauschii]
          Length = 898

 Score =  155 bits (391), Expect = 8e-36
 Identities = 78/124 (62%), Positives = 96/124 (77%), Gaps = 5/124 (4%)
 Frame = -2

Query: 359  DPRRSSRKIVPPKRYS-----YLMTENNEPTNYKAALESPDSDKWLEAMKTEMDSMSENQ 195
            +PRRS+R    P+ Y       ++ +++EPTNY+ A+ S DS KWLEAMK+EM SM EN+
Sbjct: 724  EPRRSTRLRSAPEWYGNPVLEVMLIDHDEPTNYEEAMVSLDSAKWLEAMKSEMGSMYENK 783

Query: 194  VWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQVHGIDYEETFSPVAML 15
            VW LVDLPDG + IE KWI+K K D DGNV VYKARLVAKG++QV GIDY+ETFSPVAML
Sbjct: 784  VWTLVDLPDGRQAIENKWIFKKKTDADGNVTVYKARLVAKGFRQVQGIDYDETFSPVAML 843

Query: 14   KSIR 3
            KS+R
Sbjct: 844  KSVR 847


>gb|AAX96621.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77550176|gb|ABA92973.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 591

 Score =  149 bits (375), Expect = 6e-34
 Identities = 65/102 (63%), Positives = 85/102 (83%)
 Frame = -2

Query: 308 LMTENNEPTNYKAALESPDSDKWLEAMKTEMDSMSENQVWDLVDLPDGVKPIECKWIYKI 129
           L+ +N+EPT Y+  +  PDS+KWL AMK+E++SM  NQ+W+LVD PDGVK IECKW++K 
Sbjct: 421 LLLDNDEPTTYEETMVGPDSEKWLGAMKSEIESMHVNQIWNLVDPPDGVKAIECKWVFKK 480

Query: 128 KLDMDGNVIVYKARLVAKGYKQVHGIDYEETFSPVAMLKSIR 3
           K D+DGNV +YK RLVAK Y+Q+ G+DY+ETFSPVAMLKSI+
Sbjct: 481 KTDVDGNVHIYKIRLVAKSYRQIQGVDYDETFSPVAMLKSIQ 522


>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1073

 Score =  149 bits (375), Expect = 6e-34
 Identities = 68/108 (62%), Positives = 88/108 (81%)
 Frame = -2

Query: 326  PKRYSYLMTENNEPTNYKAALESPDSDKWLEAMKTEMDSMSENQVWDLVDLPDGVKPIEC 147
            PK Y   + +N++PT Y+ A+   DS+K L AMK+E++SM  NQVW+LVD PDGVK IEC
Sbjct: 712  PKEYDVHLRDNDKPTTYEEAMVGLDSEKCLGAMKSEIESMHVNQVWNLVDPPDGVKAIEC 771

Query: 146  KWIYKIKLDMDGNVIVYKARLVAKGYKQVHGIDYEETFSPVAMLKSIR 3
            KW++K K D+DGNV +YKARLVAKG++Q+ G+DY+ETFSPVAMLKSIR
Sbjct: 772  KWVFKKKTDVDGNVHIYKARLVAKGFRQIQGVDYDETFSPVAMLKSIR 819


>emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]
          Length = 633

 Score =  145 bits (367), Expect = 5e-33
 Identities = 85/160 (53%), Positives = 98/160 (61%), Gaps = 11/160 (6%)
 Frame = -2

Query: 449 DSIQETIPSLERTEEVPQVPQQVETTNEAQDP---RRSSRKIVPPKRYSYLMTE------ 297
           D +Q+ +P +     +   PQQ E    A  P   RRS R   PP RY+ L         
Sbjct: 49  DEVQDVVPPVINLXALQ--PQQBEGV--AXQPVVLRRSGRTRRPPVRYTXLGEAFDRIPE 104

Query: 296 --NNEPTNYKAALESPDSDKWLEAMKTEMDSMSENQVWDLVDLPDGVKPIECKWIYKIKL 123
             N EP  Y  AL+  D+DKWL AMK+EM+SM  NQVW+LV+ P GVKPI CKWIYK K 
Sbjct: 105 EVNTEPVCYDDALQDKDADKWLVAMKSEMESMYSNQVWELVEPPKGVKPIGCKWIYKKKR 164

Query: 122 DMDGNVIVYKARLVAKGYKQVHGIDYEETFSPVAMLKSIR 3
            +DG    YKA LVAKGY Q  GIDYEETFSPVAMLKSIR
Sbjct: 165 GIDGKXZTYKAXLVAKGYTQKEGIDYEETFSPVAMLKSIR 204


>gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 655

 Score =  144 bits (364), Expect = 1e-32
 Identities = 66/108 (61%), Positives = 86/108 (79%)
 Frame = -2

Query: 326 PKRYSYLMTENNEPTNYKAALESPDSDKWLEAMKTEMDSMSENQVWDLVDLPDGVKPIEC 147
           PK Y   +  N+EPT Y+ A+  P S+KWL AMK++++SM  NQVW+LVD  D VK IEC
Sbjct: 291 PKGYGVHLRGNDEPTTYEEAMVGPGSEKWLGAMKSKIESMHVNQVWNLVDPLDSVKAIEC 350

Query: 146 KWIYKIKLDMDGNVIVYKARLVAKGYKQVHGIDYEETFSPVAMLKSIR 3
           KW++K K D+DGNV +YKARLVAKG++Q+ G++Y+ETFSPVAMLKSIR
Sbjct: 351 KWVFKKKTDVDGNVHIYKARLVAKGFRQIQGVNYDETFSPVAMLKSIR 398


>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
          Length = 1292

 Score =  142 bits (359), Expect = 4e-32
 Identities = 74/139 (53%), Positives = 87/139 (62%), Gaps = 8/139 (5%)
 Frame = -2

Query: 395  VPQQVETTNEAQDPRRSSRKIVPPKRYSYLMTEN--------NEPTNYKAALESPDSDKW 240
            +  Q  T+ E + PRRS R +  P RY  L+            +P  YK A+   D D+W
Sbjct: 761  ISDQSHTSQELRVPRRSGRVVHQPNRYLGLVETQIIIPDDGVEDPLTYKQAMNDVDRDQW 820

Query: 239  LEAMKTEMDSMSENQVWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQV 60
            ++AM  EM+SM  N VW LVDLP  VKPI CKWIYK K D  G V  +KARLVAKGY Q 
Sbjct: 821  IKAMNLEMESMYFNSVWTLVDLPSDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQK 880

Query: 59   HGIDYEETFSPVAMLKSIR 3
             G+DYEETFSPVAMLKSIR
Sbjct: 881  EGVDYEETFSPVAMLKSIR 899


>gb|EXC18499.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
           notabilis]
          Length = 414

 Score =  140 bits (353), Expect = 2e-31
 Identities = 88/196 (44%), Positives = 112/196 (57%), Gaps = 9/196 (4%)
 Frame = -2

Query: 563 VARNGVFLESN-MLSTKASGSNDLEEVRETE--PQVVASSSDSIQETIPSLERTEEVPQV 393
           V+ N  FLE + M+  K      LEE+   E  PQ         Q+TI           V
Sbjct: 197 VSTNATFLEHDYMIDFKPRSKIVLEELLSDEIRPQPTRVVGPLRQKTI-----------V 245

Query: 392 PQQVETTNEAQDPRRSSRKIVPPKRYS---YLMTENN---EPTNYKAALESPDSDKWLEA 231
           P Q         PRRS R    P RY+    ++T ++   +P+ ++ A++  + ++W  A
Sbjct: 246 PDQT-----LMAPRRSRRVSRLPDRYTGEAQIVTADDGKEDPSTFRDAMDDSNKEEWQAA 300

Query: 230 MKTEMDSMSENQVWDLVDLPDGVKPIECKWIYKIKLDMDGNVIVYKARLVAKGYKQVHGI 51
           MK E++SM  N VW LVDLP+GVKPI CKWIYK K  +DG V  YKARLVAKGY Q  G+
Sbjct: 301 MKLEIESMHSNSVWQLVDLPEGVKPIRCKWIYKRKRGVDGKVETYKARLVAKGYTQKEGV 360

Query: 50  DYEETFSPVAMLKSIR 3
           DYEETFSPVAMLKSIR
Sbjct: 361 DYEETFSPVAMLKSIR 376


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