BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00062541
         (208 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX19931.1| viral replicase [Nandina mosaic virus]                 133   2e-29
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ...   119   3e-25
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ...   119   3e-25
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ...   119   3e-25
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ...   119   3e-25
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ...   119   3e-25
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ...   119   3e-25
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ...   119   4e-25
gb|AGW45389.1| RNA-dependent RNA polymerase, partial [Plantago a...   117   2e-24
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1...    91   1e-16
ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi...    82   1e-13
ref|YP_001960940.1| RNA-dependent RNA polymerase [Lettuce virus ...    66   4e-09
gb|AHB59866.1| replicase [Narcissus mosaic virus]                      64   3e-08
ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|A...    62   6e-08
gb|AAP51012.1| 186K protein [Narcissus mosaic virus strain New Z...    62   6e-08
ref|NP_040778.1| replicase [Narcissus mosaic virus] gi|139136|sp...    60   4e-07
gb|AGO03686.1| RNA dependent RNA polymerase, partial [Actinidia ...    60   4e-07
ref|NP_054025.1| RNA dependent RNA polymerase [Cymbidium mosaic ...    58   1e-06
ref|YP_319827.1| replicase protein [Alstroemeria virus x] gi|742...    58   1e-06
gb|AFM45301.1| RNA-dependent RNA polymerase [Cymbidium mosaic vi...    58   1e-06

>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
          Length = 1368

 Score =  133 bits (335), Expect = 2e-29
 Identities = 63/68 (92%), Positives = 66/68 (97%)
 Frame = +3

Query: 3   LDSHTCFEDVLSGNLIQRLLRPLRADIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 182
           LDSHTCFEDVLSGNL+QRLLRPLRAD+QR+L FFRGRPSFVKLIKALDWQPITLEFPVR 
Sbjct: 348 LDSHTCFEDVLSGNLLQRLLRPLRADMQRILHFFRGRPSFVKLIKALDWQPITLEFPVRR 407

Query: 183 VNTRLRGP 206
           VNTRLRGP
Sbjct: 408 VNTRLRGP 415


>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  119 bits (299), Expect = 3e-25
 Identities = 55/67 (82%), Positives = 62/67 (92%)
 Frame = +3

Query: 3   LDSHTCFEDVLSGNLIQRLLRPLRADIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 182
           LDSHTCFED+LSGNL+QR+LRPLR+ + ++L FFRGRPSFVKLIKALDWQPITLEFPVR 
Sbjct: 348 LDSHTCFEDILSGNLLQRMLRPLRSGLTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRK 407

Query: 183 VNTRLRG 203
           VNT LRG
Sbjct: 408 VNTHLRG 414


>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  119 bits (299), Expect = 3e-25
 Identities = 55/67 (82%), Positives = 62/67 (92%)
 Frame = +3

Query: 3   LDSHTCFEDVLSGNLIQRLLRPLRADIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 182
           LDSHTCFED+LSGNL+QR+LRPLR+ + ++L FFRGRPSFVKLIKALDWQPITLEFPVR 
Sbjct: 348 LDSHTCFEDILSGNLLQRMLRPLRSGLTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRK 407

Query: 183 VNTRLRG 203
           VNT LRG
Sbjct: 408 VNTHLRG 414


>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  119 bits (299), Expect = 3e-25
 Identities = 55/67 (82%), Positives = 62/67 (92%)
 Frame = +3

Query: 3   LDSHTCFEDVLSGNLIQRLLRPLRADIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 182
           LDSHTCFED+LSGNL+QR+LRPLR+ + ++L FFRGRPSFVKLIKALDWQPITLEFPVR 
Sbjct: 348 LDSHTCFEDILSGNLLQRMLRPLRSGLTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRK 407

Query: 183 VNTRLRG 203
           VNT LRG
Sbjct: 408 VNTHLRG 414


>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  119 bits (299), Expect = 3e-25
 Identities = 55/67 (82%), Positives = 62/67 (92%)
 Frame = +3

Query: 3   LDSHTCFEDVLSGNLIQRLLRPLRADIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 182
           LDSHTCFED+LSGNL+QR+LRPLR+ + ++L FFRGRPSFVKLIKALDWQPITLEFPVR 
Sbjct: 348 LDSHTCFEDILSGNLLQRMLRPLRSGLTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRK 407

Query: 183 VNTRLRG 203
           VNT LRG
Sbjct: 408 VNTHLRG 414


>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  119 bits (299), Expect = 3e-25
 Identities = 55/67 (82%), Positives = 62/67 (92%)
 Frame = +3

Query: 3   LDSHTCFEDVLSGNLIQRLLRPLRADIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 182
           LDSHTCFED+LSGNL+QR+LRPLR+ + ++L FFRGRPSFVKLIKALDWQPITLEFPVR 
Sbjct: 348 LDSHTCFEDILSGNLLQRMLRPLRSGLTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRK 407

Query: 183 VNTRLRG 203
           VNT LRG
Sbjct: 408 VNTHLRG 414


>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  119 bits (299), Expect = 3e-25
 Identities = 55/67 (82%), Positives = 62/67 (92%)
 Frame = +3

Query: 3   LDSHTCFEDVLSGNLIQRLLRPLRADIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 182
           LDSHTCFED+LSGNL+QR+LRPLR+ + ++L FFRGRPSFVKLIKALDWQPITLEFPVR 
Sbjct: 348 LDSHTCFEDILSGNLLQRMLRPLRSGLTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRK 407

Query: 183 VNTRLRG 203
           VNT LRG
Sbjct: 408 VNTHLRG 414


>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  119 bits (298), Expect = 4e-25
 Identities = 55/67 (82%), Positives = 62/67 (92%)
 Frame = +3

Query: 3   LDSHTCFEDVLSGNLIQRLLRPLRADIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 182
           LDSHTCFED+LSGNL+QR+LRPL++ I ++L FFRGRPSFVKLIKALDWQPITLEFPVR 
Sbjct: 348 LDSHTCFEDILSGNLLQRMLRPLKSGITQLLNFFRGRPSFVKLIKALDWQPITLEFPVRK 407

Query: 183 VNTRLRG 203
           VNT LRG
Sbjct: 408 VNTHLRG 414


>gb|AGW45389.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
           virus]
          Length = 669

 Score =  117 bits (293), Expect = 2e-24
 Identities = 54/68 (79%), Positives = 61/68 (89%)
 Frame = +3

Query: 3   LDSHTCFEDVLSGNLIQRLLRPLRADIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 182
           LDSHTCFED+LSGNL+QR+LRPL +   ++L FFRGRPSFVKLI+ALDWQPITLEFPVR 
Sbjct: 348 LDSHTCFEDILSGNLLQRILRPLTSGATQILNFFRGRPSFVKLIQALDWQPITLEFPVRK 407

Query: 183 VNTRLRGP 206
           VNT LRGP
Sbjct: 408 VNTLLRGP 415


>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
           gi|1173174|sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA
           replication protein; AltName: Full=156 kDa protein;
           AltName: Full=ORF1 protein; Includes: RecName:
           Full=RNA-directed RNA polymerase; Includes: RecName:
           Full=Helicase gi|311645|emb|CAA79761.1| 156K-protein
           [Plantago asiatica mosaic virus]
          Length = 1385

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 47/68 (69%), Positives = 50/68 (73%)
 Frame = +3

Query: 3   LDSHTCFEDVLSGNLIQRLLRPLRADIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 182
           LDSHTCFEDV    L  +        I R+LQFFRGRPSFVKLIKALDWQPITLEFPVR 
Sbjct: 347 LDSHTCFEDV-PPKLAPKTTPAPPLGISRILQFFRGRPSFVKLIKALDWQPITLEFPVRD 405

Query: 183 VNTRLRGP 206
           V T +RGP
Sbjct: 406 VRTTVRGP 413


>ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X]
           gi|23491554|dbj|BAC16785.1| RNA-dependent RNA polymerase
           [Tulip virus X]
          Length = 1361

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 39/68 (57%), Positives = 48/68 (70%)
 Frame = +3

Query: 3   LDSHTCFEDVLSGNLIQRLLRPLRADIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 182
           LDS TC ED+LSG+L+ RLLRP R + Q +++FF+G P   KLIKAL WQP+ LEF V T
Sbjct: 347 LDSATCHEDILSGSLLTRLLRPARVNWQALVRFFKGSPDHTKLIKALQWQPVLLEFKVST 406

Query: 183 VNTRLRGP 206
           V    R P
Sbjct: 407 VLVHKRTP 414


>ref|YP_001960940.1| RNA-dependent RNA polymerase [Lettuce virus X]
           gi|189458580|emb|CAN88808.1| RNA-dependent RNA
           polymerase [Lettuce virus X]
          Length = 1708

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 30/65 (46%), Positives = 42/65 (64%)
 Frame = +3

Query: 3   LDSHTCFEDVLSGNLIQRLLRPLRADIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 182
           L S+TC+ED+LSG LI+RL RP+R  + R ++FF GR  F KL+ AL W+P T       
Sbjct: 352 LKSYTCYEDLLSGGLIKRLTRPVRTAVTRFIEFFAGRNDFNKLMDALKWEPFTYTLEPAV 411

Query: 183 VNTRL 197
             T++
Sbjct: 412 YKTKV 416


>gb|AHB59866.1| replicase [Narcissus mosaic virus]
          Length = 1630

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 5/71 (7%)
 Frame = +3

Query: 3   LDSHTCFEDVLSGNLIQRLLRPLRADIQRVLQFFRGRPSFVKLIKALDWQPIT-----LE 167
           LDS TC+ED+LS N+  RL RPLR  +++ ++FF+G+  F KL+ AL WQP +     ++
Sbjct: 352 LDSITCYEDLLSSNIWTRLTRPLRTAVRKFVEFFKGKQDFDKLLIALKWQPFSYSLEPVD 411

Query: 168 FPVRTVNTRLR 200
           F    V+ R+R
Sbjct: 412 FTAYFVSRRVR 422


>ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|ACN58194.1| replicase
           [Allium virus X]
          Length = 1701

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 29/61 (47%), Positives = 38/61 (62%)
 Frame = +3

Query: 6   DSHTCFEDVLSGNLIQRLLRPLRADIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTV 185
           DS TCF D+LSG+L ++L +PL A +     F  G P F KL+KAL WQ IT+   V  +
Sbjct: 347 DSMTCFSDILSGSLFKKLFQPLAAFLAECKHFIFGEPDFKKLLKALQWQDITMVVTVADI 406

Query: 186 N 188
           N
Sbjct: 407 N 407


>gb|AAP51012.1| 186K protein [Narcissus mosaic virus strain New Zealand]
          Length = 1643

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 30/71 (42%), Positives = 47/71 (66%), Gaps = 5/71 (7%)
 Frame = +3

Query: 3   LDSHTCFEDVLSGNLIQRLLRPLRADIQRVLQFFRGRPSFVKLIKALDWQPIT-----LE 167
           LDS TC+ED+LS ++  RL RPLR  +++ ++FF+G+  F KL+ AL WQP +     ++
Sbjct: 352 LDSTTCYEDLLSSDIWMRLTRPLRTAVRKFVEFFKGKQDFDKLLIALKWQPFSYSLEPVD 411

Query: 168 FPVRTVNTRLR 200
           F    V+ R+R
Sbjct: 412 FTAYFVSRRVR 422


>ref|NP_040778.1| replicase [Narcissus mosaic virus] gi|139136|sp|P15095.1|RDRP_NMV
           RecName: Full=RNA replication protein; AltName: Full=186
           kDa protein; AltName: Full=ORF1 protein; Includes:
           RecName: Full=RNA-directed RNA polymerase; Includes:
           RecName: Full=Helicase gi|222108|dbj|BAA02891.1| 186K
           protein [Narcissus mosaic virus]
          Length = 1643

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
 Frame = +3

Query: 3   LDSHTCFEDVLSGNLIQRLLRPLRADIQRVLQFFRGRPSFVKLIKALDWQPIT-----LE 167
           LDS TC+ED+LS ++  RL RPLR  +++ ++ F+G+  F KL+ AL WQP +     ++
Sbjct: 352 LDSITCYEDLLSSDIWMRLTRPLRTAVRKFVELFKGKQDFDKLLIALKWQPFSYSLEPVD 411

Query: 168 FPVRTVNTRLR 200
           F    V+ R+R
Sbjct: 412 FTAYFVSRRVR 422


>gb|AGO03686.1| RNA dependent RNA polymerase, partial [Actinidia virus X]
          Length = 1607

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 25/53 (47%), Positives = 40/53 (75%)
 Frame = +3

Query: 3   LDSHTCFEDVLSGNLIQRLLRPLRADIQRVLQFFRGRPSFVKLIKALDWQPIT 161
           LDS TCFED+LS N+ +RL  P+R + +++++FF+G+  F KL++AL W+  T
Sbjct: 357 LDSITCFEDMLSNNVWRRLTLPIRTNFRQLVEFFKGKSDFDKLLQALKWETFT 409


>ref|NP_054025.1| RNA dependent RNA polymerase [Cymbidium mosaic virus]
           gi|2105116|gb|AAB57879.1| RNA dependent RNA polymerase
           [Cymbidium mosaic virus]
          Length = 1417

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 25/64 (39%), Positives = 40/64 (62%)
 Frame = +3

Query: 3   LDSHTCFEDVLSGNLIQRLLRPLRADIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 182
           L S + ++D+LS N+ Q    P++  I+ ++Q F G   F +L+KALDWQ  +   PV T
Sbjct: 351 LSSVSSYDDILSSNIFQHFTIPIKNKIRELVQLFTGADQFNQLLKALDWQTFSYSMPVET 410

Query: 183 VNTR 194
           ++TR
Sbjct: 411 IHTR 414


>ref|YP_319827.1| replicase protein [Alstroemeria virus x]
           gi|74267429|dbj|BAE44211.1| replicase protein
           [Alstroemeria virus x]
          Length = 1646

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/65 (40%), Positives = 41/65 (63%)
 Frame = +3

Query: 3   LDSHTCFEDVLSGNLIQRLLRPLRADIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 182
           L S TC+ED+LSG+L++R+  P+R  I + ++ FRG+  FVKL+ AL W   T       
Sbjct: 352 LHSITCYEDLLSGSLLKRMTVPIRTAITKFVEVFRGKNDFVKLLDALKWDNFTYSIKPED 411

Query: 183 VNTRL 197
           + T++
Sbjct: 412 MTTKM 416


>gb|AFM45301.1| RNA-dependent RNA polymerase [Cymbidium mosaic virus]
          Length = 1417

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 25/64 (39%), Positives = 40/64 (62%)
 Frame = +3

Query: 3   LDSHTCFEDVLSGNLIQRLLRPLRADIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRT 182
           L S + ++D+LS N+ Q    P++  I+ ++Q F G   F +L+KALDWQ  +   PV T
Sbjct: 351 LSSVSSYDDILSSNIFQHFTIPIKNKIRELVQLFTGADQFNQLLKALDWQTFSYSMPVET 410

Query: 183 VNTR 194
           ++TR
Sbjct: 411 IHTR 414