BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00062353
         (219 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   103   3e-20
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...   100   2e-19
emb|CAE02400.1| OSJNBa0024J22.4 [Oryza sativa Japonica Group] gi...    98   1e-18
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...    97   2e-18
dbj|BAA22288.1| polyprotein [Oryza australiensis]                      96   4e-18
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...    96   4e-18
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]      96   4e-18
gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subc...    95   1e-17
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc...    92   5e-17
gb|ABA97706.1| retrotransposon protein, putative, Ty1-copia subc...    92   7e-17
gb|AAX96622.1| retrotransposon protein, putative, Ty1-copia sub-...    92   9e-17
gb|ABF96491.1| retrotransposon protein, putative, Ty1-copia subc...    92   9e-17
gb|AAP03364.1| putative polyprotein [Oryza sativa Japonica Group]      92   9e-17
ref|XP_004978922.1| PREDICTED: uncharacterized protein LOC101776...    91   1e-16
gb|ABA96688.1| retrotransposon protein, putative, Ty1-copia subc...    90   3e-16
emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]         90   3e-16
emb|CAD40475.2| OSJNBa0067G20.13 [Oryza sativa Japonica Group]         86   7e-15
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...    83   3e-14
gb|EMS45473.1| Retrovirus-related Pol polyprotein from transposo...    83   4e-14
gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-...    82   1e-13

>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
            19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
            putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  103 bits (256), Expect = 3e-20
 Identities = 52/68 (76%), Positives = 56/68 (82%)
 Frame = -3

Query: 205  ASFQIDKDDFRS*FGFIFVLNGGTLSCKSAKHSTRADSTAEAEYIVASEAAKEVVWIRKF 26
            ASFQ DKDDFRS  GF F LNGG +S KS K ST ADST EAEYI ASEAAKEVVWIRKF
Sbjct: 812  ASFQTDKDDFRSQSGFFFCLNGGAVSWKSTKQSTVADSTTEAEYIAASEAAKEVVWIRKF 871

Query: 25   LSELGMVP 2
            ++ELG+VP
Sbjct: 872  ITELGVVP 879


>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score =  100 bits (249), Expect = 2e-19
 Identities = 49/68 (72%), Positives = 56/68 (82%)
 Frame = -3

Query: 205 ASFQIDKDDFRS*FGFIFVLNGGTLSCKSAKHSTRADSTAEAEYIVASEAAKEVVWIRKF 26
           ASFQ DKDD+RS  GF+F+LNGG +S KS+K  T ADST EAEYI ASEAAKE VWIR F
Sbjct: 745 ASFQTDKDDYRSQSGFVFILNGGAVSWKSSKQETVADSTTEAEYIAASEAAKEGVWIRNF 804

Query: 25  LSELGMVP 2
           ++ELGMVP
Sbjct: 805 ITELGMVP 812


>emb|CAE02400.1| OSJNBa0024J22.4 [Oryza sativa Japonica Group]
           gi|38347202|emb|CAD40526.2| OSJNBa0023J03.14 [Oryza
           sativa Japonica Group] gi|116308930|emb|CAH66059.1|
           OSIGBa0125J07.8 [Oryza sativa Indica Group]
           gi|116309043|emb|CAH66155.1| OSIGBa0113B06.1 [Oryza
           sativa Indica Group]
          Length = 704

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 48/67 (71%), Positives = 57/67 (85%)
 Frame = -3

Query: 205 ASFQIDKDDFRS*FGFIFVLNGGTLSCKSAKHSTRADSTAEAEYIVASEAAKEVVWIRKF 26
           ASFQ DKDDFRS  GF+F LNGG +S KS+K +T ADST EAEYI ASEAAKEVVWI+KF
Sbjct: 552 ASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQNTVADSTTEAEYIAASEAAKEVVWIKKF 611

Query: 25  LSELGMV 5
           +S+LG++
Sbjct: 612 VSQLGVM 618


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 47/68 (69%), Positives = 56/68 (82%)
 Frame = -3

Query: 205  ASFQIDKDDFRS*FGFIFVLNGGTLSCKSAKHSTRADSTAEAEYIVASEAAKEVVWIRKF 26
            ASFQ DKDD+RS  GF+F+LNGG +S KS+K  T ADST +AEYI ASEAAKE VWIR F
Sbjct: 1161 ASFQTDKDDYRSQSGFVFILNGGAVSWKSSKQETVADSTTKAEYIAASEAAKEGVWIRNF 1220

Query: 25   LSELGMVP 2
            ++ELG+VP
Sbjct: 1221 IAELGVVP 1228


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 47/67 (70%), Positives = 55/67 (82%)
 Frame = -3

Query: 205  ASFQIDKDDFRS*FGFIFVLNGGTLSCKSAKHSTRADSTAEAEYIVASEAAKEVVWIRKF 26
            ASFQ DKDD+RS  GF+F LNGG +S KS+K  T ADST EAEYI ASEAAKE VWI+KF
Sbjct: 1165 ASFQTDKDDYRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWIKKF 1224

Query: 25   LSELGMV 5
            +SELG++
Sbjct: 1225 VSELGVM 1231


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1248

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 47/67 (70%), Positives = 55/67 (82%)
 Frame = -3

Query: 205  ASFQIDKDDFRS*FGFIFVLNGGTLSCKSAKHSTRADSTAEAEYIVASEAAKEVVWIRKF 26
            ASFQ DKDDFRS  GF+F LNGG +S KS+K  T ADST EAEYI ASEAAKE VWI+KF
Sbjct: 1114 ASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWIKKF 1173

Query: 25   LSELGMV 5
            +S+LG++
Sbjct: 1174 VSQLGVM 1180


>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 47/67 (70%), Positives = 55/67 (82%)
 Frame = -3

Query: 205  ASFQIDKDDFRS*FGFIFVLNGGTLSCKSAKHSTRADSTAEAEYIVASEAAKEVVWIRKF 26
            ASFQ DKDDFRS  GF+F LNGG +S KS+K  T ADST EAEYI ASEAAKE VWI+KF
Sbjct: 1027 ASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWIKKF 1086

Query: 25   LSELGMV 5
            +S+LG++
Sbjct: 1087 VSQLGVM 1093


>gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 932

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 46/67 (68%), Positives = 54/67 (80%)
 Frame = -3

Query: 205 ASFQIDKDDFRS*FGFIFVLNGGTLSCKSAKHSTRADSTAEAEYIVASEAAKEVVWIRKF 26
           ASFQ DKDDFRS  GF+F LNGG +S KS+K  T ADST EAEYI ASEAAKE  WI+KF
Sbjct: 789 ASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAAWIKKF 848

Query: 25  LSELGMV 5
           +S+LG++
Sbjct: 849 VSQLGVM 855


>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1050

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 45/67 (67%), Positives = 53/67 (79%)
 Frame = -3

Query: 205  ASFQIDKDDFRS*FGFIFVLNGGTLSCKSAKHSTRADSTAEAEYIVASEAAKEVVWIRKF 26
            ASFQ DKDDFRS  GF+F LNGG +S KS+K  T  DS  EAEYI ASEAAKE VWI+KF
Sbjct: 899  ASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVVDSITEAEYIAASEAAKEAVWIKKF 958

Query: 25   LSELGMV 5
            +S+LG++
Sbjct: 959  VSQLGVM 965


>gb|ABA97706.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 206

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 45/66 (68%), Positives = 53/66 (80%)
 Frame = -3

Query: 202 SFQIDKDDFRS*FGFIFVLNGGTLSCKSAKHSTRADSTAEAEYIVASEAAKEVVWIRKFL 23
           SFQ DKDDFRS  GF+F LNGG +S KS+K    ADST EAEYI ASEAAKE VWI+KF+
Sbjct: 81  SFQNDKDDFRSQSGFLFCLNGGAVSWKSSKQDIAADSTTEAEYIAASEAAKEAVWIKKFV 140

Query: 22  SELGMV 5
           S+LG++
Sbjct: 141 SQLGVM 146


>gb|AAX96622.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77550175|gb|ABA92972.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 305

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 44/67 (65%), Positives = 54/67 (80%)
 Frame = -3

Query: 205 ASFQIDKDDFRS*FGFIFVLNGGTLSCKSAKHSTRADSTAEAEYIVASEAAKEVVWIRKF 26
           ASFQ DKDDFRS  GF+F LNGG +S KS+K  T A+ST + EYI ASEAAKE VWI+KF
Sbjct: 148 ASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTLANSTTKTEYIAASEAAKEAVWIKKF 207

Query: 25  LSELGMV 5
           +S+LG++
Sbjct: 208 VSQLGVM 214


>gb|ABF96491.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 767

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 45/67 (67%), Positives = 54/67 (80%)
 Frame = -3

Query: 205 ASFQIDKDDFRS*FGFIFVLNGGTLSCKSAKHSTRADSTAEAEYIVASEAAKEVVWIRKF 26
           ASFQ DKDDFRS   F+F LNGG +S KS+K  T ADST EAEYI ASEAAK+ VWI+KF
Sbjct: 639 ASFQTDKDDFRSQSKFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKKAVWIKKF 698

Query: 25  LSELGMV 5
           +S+LG++
Sbjct: 699 VSQLGVM 705


>gb|AAP03364.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 657

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 45/67 (67%), Positives = 54/67 (80%)
 Frame = -3

Query: 205 ASFQIDKDDFRS*FGFIFVLNGGTLSCKSAKHSTRADSTAEAEYIVASEAAKEVVWIRKF 26
           ASFQ DKDDFRS   F+F LNGG +S KS+K  T ADST EAEYI ASEAAK+ VWI+KF
Sbjct: 529 ASFQTDKDDFRSQSKFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKKAVWIKKF 588

Query: 25  LSELGMV 5
           +S+LG++
Sbjct: 589 VSQLGVM 595


>ref|XP_004978922.1| PREDICTED: uncharacterized protein LOC101776990, partial [Setaria
           italica]
          Length = 1686

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 46/68 (67%), Positives = 52/68 (76%)
 Frame = -3

Query: 205 ASFQIDKDDFRS*FGFIFVLNGGTLSCKSAKHSTRADSTAEAEYIVASEAAKEVVWIRKF 26
           ASFQ D+DD +S  GF+F LNGG +S KS+K  T ADST EAEYI ASEAAKE VWIR F
Sbjct: 531 ASFQTDRDDSKSQSGFVFTLNGGAVSWKSSKQETVADSTTEAEYIAASEAAKEGVWIRNF 590

Query: 25  LSELGMVP 2
           L ELG+ P
Sbjct: 591 LIELGVFP 598


>gb|ABA96688.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 325

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 44/67 (65%), Positives = 52/67 (77%)
 Frame = -3

Query: 205 ASFQIDKDDFRS*FGFIFVLNGGTLSCKSAKHSTRADSTAEAEYIVASEAAKEVVWIRKF 26
           ASFQ DKDDFRS  GF+F LNGG +S KS+K    ADST + EYI ASEAAKE VWI KF
Sbjct: 191 ASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDIVADSTTKPEYIAASEAAKEAVWINKF 250

Query: 25  LSELGMV 5
           +S+LG++
Sbjct: 251 VSQLGVM 257


>emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]
          Length = 948

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 44/62 (70%), Positives = 50/62 (80%)
 Frame = -3

Query: 205  ASFQIDKDDFRS*FGFIFVLNGGTLSCKSAKHSTRADSTAEAEYIVASEAAKEVVWIRKF 26
            ASFQ DKDDFRS  GF+F LNGG +S KS+K  T ADST EAEYI ASEAAK+ VWI+KF
Sbjct: 887  ASFQTDKDDFRSRSGFVFCLNGGVVSWKSSKQDTVADSTTEAEYIAASEAAKDAVWIKKF 946

Query: 25   LS 20
            +S
Sbjct: 947  VS 948


>emb|CAD40475.2| OSJNBa0067G20.13 [Oryza sativa Japonica Group]
          Length = 462

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 41/68 (60%), Positives = 51/68 (75%)
 Frame = -3

Query: 208 HASFQIDKDDFRS*FGFIFVLNGGTLSCKSAKHSTRADSTAEAEYIVASEAAKEVVWIRK 29
           + S QIDKDDFR    F+F LNGG +S KS+K    ADST E EYI ASEAAKE +WI+K
Sbjct: 306 NTSIQIDKDDFRPQSEFVFCLNGGAVSWKSSKQDIVADSTTEVEYITASEAAKEAIWIKK 365

Query: 28  FLSELGMV 5
           F+S+LG++
Sbjct: 366 FVSQLGVM 373


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
            gi|62701883|gb|AAX92956.1| retrotransposon protein,
            putative, Ty1-copia sub-class [Oryza sativa Japonica
            Group] gi|108864259|gb|ABA92827.2| retrotransposon
            protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1184

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 43/67 (64%), Positives = 51/67 (76%)
 Frame = -3

Query: 205  ASFQIDKDDFRS*FGFIFVLNGGTLSCKSAKHSTRADSTAEAEYIVASEAAKEVVWIRKF 26
            ASFQIDKDDFRS  GF+F LNGG +S KS+K     DST EAEYI ASEA    VWI+KF
Sbjct: 1036 ASFQIDKDDFRSQSGFVFCLNGGAVSWKSSKQDIVVDSTTEAEYIAASEA----VWIKKF 1091

Query: 25   LSELGMV 5
            +S+LG++
Sbjct: 1092 VSQLGVM 1098


>gb|EMS45473.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Triticum urartu]
          Length = 914

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 41/68 (60%), Positives = 49/68 (72%)
 Frame = -3

Query: 205 ASFQIDKDDFRS*FGFIFVLNGGTLSCKSAKHSTRADSTAEAEYIVASEAAKEVVWIRKF 26
           ASFQ D+DD RS   F++V+NGG +S  S+K  T  DST EAEYI A EAAKE VWIR F
Sbjct: 289 ASFQTDRDDCRSQSRFVYVMNGGAVSWMSSKQDTVVDSTTEAEYIAACEAAKEGVWIRNF 348

Query: 25  LSELGMVP 2
           L +LG+ P
Sbjct: 349 LDDLGIFP 356


>gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77550379|gb|ABA93176.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 938

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 42/55 (76%), Positives = 45/55 (81%)
 Frame = -3

Query: 205  ASFQIDKDDFRS*FGFIFVLNGGTLSCKSAKHSTRADSTAEAEYIVASEAAKEVV 41
            ASFQIDKDDFRS  GF+F LNGG +S KS+K  T ADST EAEYI ASEAAKEVV
Sbjct: 884  ASFQIDKDDFRSQSGFVFYLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEVV 938