BLASTX nr result

ID: Achyranthes22_contig00062342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00062342
         (257 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...    79   8e-13
gb|ABD63105.1| polyprotein-like, related [Asparagus officinalis]       63   5e-08
gb|EOY09126.1| Uncharacterized protein TCM_024518 [Theobroma cacao]    62   8e-08
gb|EOY22705.1| Transducin/WD40 repeat-like superfamily protein [...    62   1e-07
gb|EOY34202.1| Uncharacterized protein TCM_041944 [Theobroma cacao]    59   9e-07
gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subc...    57   2e-06
gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subc...    57   2e-06
emb|CAN78761.1| hypothetical protein VITISV_003313 [Vitis vinifera]    57   3e-06

>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 46/79 (58%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
 Frame = -3

Query: 234 QIAADLWAKLESLYLTKSLTNDLLLKQRLFG*CMQVGTSLRDYLDRLH-YFTRLT*FRCQ 58
           + AA LW KLESLY+TKSLTN LLLKQRLFG  M  GT LR++L++L+     L     +
Sbjct: 76  ETAAGLWLKLESLYMTKSLTNKLLLKQRLFGLRMAEGTQLREHLEQLNTLLLELRNIDVK 135

Query: 57  KEDEDVALILLVSLSNLYE 1
            EDED ALILLVSL   +E
Sbjct: 136 IEDEDAALILLVSLPMSFE 154


>gb|ABD63105.1| polyprotein-like, related [Asparagus officinalis]
          Length = 289

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
 Frame = -3

Query: 225 ADLWAKLESLYLTKSLTNDLLLKQRLFG*CMQVGTSLRDYLDRLH-YFTRLT*FRCQKED 49
           ADLW+KLE LYL KSLTN LLLKQRL+   M  GT ++ ++   +   T L+    +  D
Sbjct: 75  ADLWSKLEDLYLMKSLTNRLLLKQRLYTLWMSEGTPIKSHIGEFNSVITYLSKIDVKIND 134

Query: 48  EDVALILLVSLSNLYE 1
           ED AL+LL SL   Y+
Sbjct: 135 EDQALLLLCSLLPSYK 150


>gb|EOY09126.1| Uncharacterized protein TCM_024518 [Theobroma cacao]
          Length = 277

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
 Frame = -3

Query: 228 AADLWAKLESLYLTKSLTNDLLLKQRLFG*CMQVGTSLRDYLDRLH-YFTRLT*FRCQKE 52
           AA +W KLES+Y+TKSLTN L +KQRL+   M  GTS+  ++D  +     L     + E
Sbjct: 83  AAAMWFKLESIYITKSLTNRLYMKQRLYTLKMSEGTSVNTHIDEFNRVILDLKNIDVKIE 142

Query: 51  DEDVALILLVSLSNLYE 1
           DED+ALILL  L   YE
Sbjct: 143 DEDLALILLCYLPPSYE 159


>gb|EOY22705.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
          Length = 1029

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
 Frame = -3

Query: 228 AADLWAKLESLYLTKSLTNDLLLKQRLFG*CMQVGTSLRDYLDRLH-YFTRLT*FRCQKE 52
           AA +W KLES+Y+TKSLTN L +KQRL+   M  GTS+  ++D  +     L     + E
Sbjct: 205 AAAVWFKLESIYMTKSLTNRLYMKQRLYTLKMSEGTSVNTHIDEFNRVILDLKNIDVKIE 264

Query: 51  DEDVALILLVSLSNLYE 1
           DED+ALILL  L   YE
Sbjct: 265 DEDLALILLCYLPPSYE 281


>gb|EOY34202.1| Uncharacterized protein TCM_041944 [Theobroma cacao]
          Length = 698

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
 Frame = -3

Query: 228 AADLWAKLESLYLTKSLTNDLLLKQRLFG*CMQVGTSLRDYLDRLH-YFTRLT*FRCQKE 52
           A  +W KL+S+Y+TKSL N L +KQRL+   M  GTS+  ++D  +     L     + E
Sbjct: 83  AIAVWLKLKSIYMTKSLMNRLYIKQRLYTLKMSEGTSVNTHIDEFNRVILDLKNIDVKIE 142

Query: 51  DEDVALILLVSLSNLYE 1
           DED+ALILL SL   YE
Sbjct: 143 DEDLALILLCSLPPSYE 159


>gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 425

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
 Frame = -3

Query: 222 DLWAKLESLYLTKSLTNDLLLKQRLFG*CMQVGTSLRDYLDRLHYF-TRLT*FRCQKEDE 46
           ++W KL SLY++KSLT+ L LKQ+L+G  MQ  + LR ++D  +     L+    + +DE
Sbjct: 84  EIWDKLASLYMSKSLTSKLYLKQQLYGLQMQEESDLRKHVDVFNQLVVDLSKLDVKLDDE 143

Query: 45  DVALILLVSLSNLYE 1
           D+A+ILL SL   YE
Sbjct: 144 DMAIILLCSLPPSYE 158


>gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 424

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
 Frame = -3

Query: 222 DLWAKLESLYLTKSLTNDLLLKQRLFG*CMQVGTSLRDYLDRLHYF-TRLT*FRCQKEDE 46
           ++W KL SLY++KSLT+ L LKQ+L+G  MQ  + LR ++D  +     L+    + +DE
Sbjct: 84  EIWVKLTSLYMSKSLTSKLYLKQQLYGLQMQEESDLRKHVDVFNQLVVDLSKLDVKLDDE 143

Query: 45  DVALILLVSLSNLYE 1
           D A+ILL SL   YE
Sbjct: 144 DKAIILLCSLPPSYE 158


>emb|CAN78761.1| hypothetical protein VITISV_003313 [Vitis vinifera]
          Length = 836

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 36/80 (45%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
 Frame = -3

Query: 240 KLQIAADLWAKLESLYLTKSLTNDLLLKQRLFG*CMQVGTSLRDYLDRLH-YFTRLT*FR 64
           K  +A  LW KLESLY+TKSLTN L LK+RL    M+   S++D LD  +     L    
Sbjct: 528 KENMATKLWLKLESLYMTKSLTNRLYLKKRLHTLHMKKFMSIKDLLDEFNKTIMDLRNID 587

Query: 63  CQKEDEDVALILLVSLSNLY 4
            + +DED A+ L+ SL N Y
Sbjct: 588 IRIDDEDQAMTLISSLPNSY 607


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