BLASTX nr result
ID: Achyranthes22_contig00062048
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes22_contig00062048
(549 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABM55240.1| retrotransposon protein [Beta vulgaris] 113 2e-38
gb|EOY03078.1| Retrotransposon protein, putative [Theobroma cacao] 114 2e-38
gb|EOY03326.1| DNA/RNA polymerases superfamily protein [Theobrom... 112 4e-38
gb|EOY26390.1| Uncharacterized protein TCM_027940 [Theobroma cacao] 112 4e-38
gb|EOY14099.1| DNA/RNA polymerases superfamily protein [Theobrom... 114 7e-38
gb|ADU56212.1| gag-pol polyprotein [Solanum lycopersicum] 107 1e-37
gb|AAO45752.1| pol protein [Cucumis melo subsp. melo] 112 2e-37
gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum] 113 2e-37
ref|XP_006366848.1| PREDICTED: uncharacterized protein LOC102605... 114 2e-37
gb|AEV42258.1| hypothetical protein [Beta vulgaris] 110 4e-37
emb|CAA73042.1| polyprotein [Ananas comosus] 100 8e-37
ref|XP_004228800.1| PREDICTED: polyprotein P3-like, partial [Sol... 107 1e-36
dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana... 114 2e-36
gb|AAL31683.1|AC092390_4 putative polyprotein [Oryza sativa Japo... 117 2e-36
ref|XP_006598618.1| PREDICTED: uncharacterized protein LOC102669... 105 5e-36
gb|AAT38724.1| Putative retrotransposon protein, identical [Sola... 101 1e-35
gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum ... 101 1e-35
gb|ABA98852.1| retrotransposon protein, putative, Ty3-gypsy subc... 97 1e-35
gb|EOY03146.1| Retrotransposon protein, putative [Theobroma cacao] 106 2e-35
ref|XP_004515382.1| PREDICTED: uncharacterized protein LOC101499... 101 2e-35
>gb|ABM55240.1| retrotransposon protein [Beta vulgaris]
Length = 1501
Score = 113 bits (283), Expect(2) = 2e-38
Identities = 59/110 (53%), Positives = 78/110 (70%), Gaps = 7/110 (6%)
Frame = +1
Query: 241 WINVLLYSLMIYWCIRRKK*HEQHLRQILEVL*KQKWYAKLSKCELCLKEVAFLGYVISK 420
++ V + ++IY R + H++HLR ILE L K + YAK SKCE L++VAFLG+ +SK
Sbjct: 708 FVVVFIDDILIY--SRNETEHDEHLRIILETLRKNQLYAKFSKCEFRLEKVAFLGHFVSK 765
Query: 421 EGIQVDPTKIKAILEWVRPTSV-------GLAGYYRRFVKDFSRIARPLT 549
EG+ VDP KI+A+ EW P SV GLAGYYRRFV+DFS+IARP+T
Sbjct: 766 EGVSVDPAKIQAVSEWPTPKSVTDIRSFLGLAGYYRRFVRDFSKIARPMT 815
Score = 71.6 bits (174), Expect(2) = 2e-38
Identities = 42/77 (54%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Frame = +2
Query: 2 RELNKVTIKNKYLLPRIEDLFD*LR--CVFQD-QLEIGISSVADEARSIHKTTF--RYGH 166
RELN VTIKNKY LPRI+DLFD L VF L G + + + KT F RYGH
Sbjct: 617 RELNNVTIKNKYPLPRIDDLFDQLNGASVFSKIDLRSGYHQLRVADKDVPKTAFRTRYGH 676
Query: 167 YEIVVMPFGLTNTHTVF 217
YE VMPFGLTN +F
Sbjct: 677 YEFTVMPFGLTNAPAIF 693
Score = 62.4 bits (150), Expect = 7e-08
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 7/80 (8%)
Frame = +3
Query: 78 VFSKINLRSGYHQLPMK----PEASIRQHSG---MDIMKSWLCHLV*RILIQYLNRTFHM 236
VFSKI+LRSGYHQL + P+ + R G +M L + I + +NR FH
Sbjct: 645 VFSKIDLRSGYHQLRVADKDVPKTAFRTRYGHYEFTVMPFGLTNAP-AIFMDLMNRIFHE 703
Query: 237 YLDKCVVVFIDDILVYSKKE 296
+LDK VVVFIDDIL+YS+ E
Sbjct: 704 FLDKFVVVFIDDILIYSRNE 723
>gb|EOY03078.1| Retrotransposon protein, putative [Theobroma cacao]
Length = 1263
Score = 114 bits (284), Expect(2) = 2e-38
Identities = 59/107 (55%), Positives = 78/107 (72%), Gaps = 7/107 (6%)
Frame = +1
Query: 250 VLLYSLMIYWCIRRKK*HEQHLRQILEVL*KQKWYAKLSKCELCLKEVAFLGYVISKEGI 429
V + ++IY + +K HEQHL+ +L++L + + YAK SKCE L+ VAFLG+V+SK+GI
Sbjct: 506 VFIDDILIY--SKSRKEHEQHLKIVLQILKEHQLYAKFSKCEFWLESVAFLGHVVSKDGI 563
Query: 430 QVDPTKIKAILEWVRPTS-------VGLAGYYRRFVKDFSRIARPLT 549
QVD KI+A+ +W RPTS VGLAGYYRRFVKDFS+I PLT
Sbjct: 564 QVDSKKIEAVEKWPRPTSVTEIRSFVGLAGYYRRFVKDFSKIVAPLT 610
Score = 71.2 bits (173), Expect(2) = 2e-38
Identities = 40/77 (51%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Frame = +2
Query: 2 RELNKVTIKNKYLLPRIEDLFD*L---RCVFQDQLEIGISSVADEARSIHKTTF--RYGH 166
R+LNKVT+KNKY LPRI+DLFD L +C + L G + I KT F RYGH
Sbjct: 412 RQLNKVTVKNKYPLPRIDDLFDQLQRAQCFSKIDLRSGYHQLRIRNEDIPKTAFRTRYGH 471
Query: 167 YEIVVMPFGLTNTHTVF 217
YE +VM FGLTN F
Sbjct: 472 YEFLVMSFGLTNAPAAF 488
Score = 55.8 bits (133), Expect = 6e-06
Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Frame = +3
Query: 81 FSKINLRSGYHQLPMK----PEASIRQHSGMD--IMKSWLCHLV*RILIQYLNRTFHMYL 242
FSKI+LRSGYHQL ++ P+ + R G ++ S+ + +NR F YL
Sbjct: 441 FSKIDLRSGYHQLRIRNEDIPKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPYL 500
Query: 243 DKCVVVFIDDILVYSK 290
DK +VVFIDDIL+YSK
Sbjct: 501 DKFMVVFIDDILIYSK 516
>gb|EOY03326.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1447
Score = 112 bits (281), Expect(2) = 4e-38
Identities = 59/110 (53%), Positives = 79/110 (71%), Gaps = 7/110 (6%)
Frame = +1
Query: 241 WINVLLYSLMIYWCIRRKK*HEQHLRQILEVL*KQKWYAKLSKCELCLKEVAFLGYVISK 420
++ V + ++IY R + HEQHL+ +L++L + + YAK SKCE L+ VAFLG+V+SK
Sbjct: 694 FVVVFIDDILIYSKSREE--HEQHLKIVLQILREHRLYAKFSKCEFWLESVAFLGHVVSK 751
Query: 421 EGIQVDPTKIKAILEWVRPTS-------VGLAGYYRRFVKDFSRIARPLT 549
EGI+VD KI+A+ +W RPTS VGLAGYYRRFVKDFS+I PLT
Sbjct: 752 EGIRVDTKKIEAVEKWPRPTSVSEIRSFVGLAGYYRRFVKDFSKIVAPLT 801
Score = 71.2 bits (173), Expect(2) = 4e-38
Identities = 40/77 (51%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Frame = +2
Query: 2 RELNKVTIKNKYLLPRIEDLFD*L---RCVFQDQLEIGISSVADEARSIHKTTF--RYGH 166
R+LNKVT+KNKY LPRI+DLFD L +C + L G + I KT F RYGH
Sbjct: 603 RQLNKVTVKNKYPLPRIDDLFDQLQGAQCFSKIDLRSGYHQLRIRNEDIPKTAFRTRYGH 662
Query: 167 YEIVVMPFGLTNTHTVF 217
YE +VM FGLTN F
Sbjct: 663 YEFLVMSFGLTNAPAAF 679
Score = 57.0 bits (136), Expect = 3e-06
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Frame = +3
Query: 81 FSKINLRSGYHQLPMK----PEASIRQHSGMD--IMKSWLCHLV*RILIQYLNRTFHMYL 242
FSKI+LRSGYHQL ++ P+ + R G ++ S+ + +NR F YL
Sbjct: 632 FSKIDLRSGYHQLRIRNEDIPKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPYL 691
Query: 243 DKCVVVFIDDILVYSK 290
DK VVVFIDDIL+YSK
Sbjct: 692 DKFVVVFIDDILIYSK 707
>gb|EOY26390.1| Uncharacterized protein TCM_027940 [Theobroma cacao]
Length = 1052
Score = 112 bits (281), Expect(2) = 4e-38
Identities = 59/110 (53%), Positives = 79/110 (71%), Gaps = 7/110 (6%)
Frame = +1
Query: 241 WINVLLYSLMIYWCIRRKK*HEQHLRQILEVL*KQKWYAKLSKCELCLKEVAFLGYVISK 420
++ V + ++IY R + HEQHL+ +L++L + + YAK SKCE L+ VAFLG+V+SK
Sbjct: 652 FVVVFIDDILIYSKSREE--HEQHLKIVLQILREHRLYAKFSKCEFWLESVAFLGHVVSK 709
Query: 421 EGIQVDPTKIKAILEWVRPTS-------VGLAGYYRRFVKDFSRIARPLT 549
EGI+VD KI+A+ +W RPTS VGLAGYYRRFVKDFS+I PLT
Sbjct: 710 EGIRVDTKKIEAVEKWPRPTSVTEIRSFVGLAGYYRRFVKDFSKIVAPLT 759
Score = 71.2 bits (173), Expect(2) = 4e-38
Identities = 40/77 (51%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Frame = +2
Query: 2 RELNKVTIKNKYLLPRIEDLFD*L---RCVFQDQLEIGISSVADEARSIHKTTF--RYGH 166
R+LNKVT+KNKY LPRI+DLFD L +C + L G + I KT F RYGH
Sbjct: 561 RQLNKVTVKNKYPLPRIDDLFDQLQGAQCFSKIDLRSGYHQLRIRNEDIPKTAFRTRYGH 620
Query: 167 YEIVVMPFGLTNTHTVF 217
YE +VM FGLTN F
Sbjct: 621 YEFLVMSFGLTNAPAAF 637
Score = 57.0 bits (136), Expect = 3e-06
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Frame = +3
Query: 81 FSKINLRSGYHQLPMK----PEASIRQHSGMD--IMKSWLCHLV*RILIQYLNRTFHMYL 242
FSKI+LRSGYHQL ++ P+ + R G ++ S+ + +NR F YL
Sbjct: 590 FSKIDLRSGYHQLRIRNEDIPKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPYL 649
Query: 243 DKCVVVFIDDILVYSK 290
DK VVVFIDDIL+YSK
Sbjct: 650 DKFVVVFIDDILIYSK 665
>gb|EOY14099.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1502
Score = 114 bits (285), Expect(2) = 7e-38
Identities = 60/110 (54%), Positives = 79/110 (71%), Gaps = 7/110 (6%)
Frame = +1
Query: 241 WINVLLYSLMIYWCIRRKK*HEQHLRQILEVL*KQKWYAKLSKCELCLKEVAFLGYVISK 420
++ V + ++IY R + HEQHL+ +L++L + + YAK SKCE L+ VAFLG+V+SK
Sbjct: 786 FVVVFIDDILIYSKSREE--HEQHLKIVLQILREHRLYAKFSKCEFWLESVAFLGHVVSK 843
Query: 421 EGIQVDPTKIKAILEWVRPTS-------VGLAGYYRRFVKDFSRIARPLT 549
EGIQVD KI+A+ +W RPTS VGLAGYYRRFVKDFS+I PLT
Sbjct: 844 EGIQVDTKKIEAVEKWPRPTSVTEIRSFVGLAGYYRRFVKDFSKIVAPLT 893
Score = 68.9 bits (167), Expect(2) = 7e-38
Identities = 39/77 (50%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Frame = +2
Query: 2 RELNKVTIKNKYLLPRIEDLFD*L---RCVFQDQLEIGISSVADEARSIHKTTF--RYGH 166
R+LNKVT+KNKY LPRI+DLFD L +C + L G + I K F RYGH
Sbjct: 695 RQLNKVTVKNKYPLPRIDDLFDQLQGAQCFSKIDLRSGYHQLRIRNEDIPKIAFQTRYGH 754
Query: 167 YEIVVMPFGLTNTHTVF 217
YE +VM FGLTN F
Sbjct: 755 YEFLVMSFGLTNAPAAF 771
>gb|ADU56212.1| gag-pol polyprotein [Solanum lycopersicum]
Length = 624
Score = 107 bits (266), Expect(2) = 1e-37
Identities = 55/110 (50%), Positives = 77/110 (70%), Gaps = 7/110 (6%)
Frame = +1
Query: 241 WINVLLYSLMIYWCIRRKK*HEQHLRQILEVL*KQKWYAKLSKCELCLKEVAFLGYVISK 420
++ V + ++IY + K+ HE+HLR +LE+L ++K YAK SKCE L V+FLG+V+SK
Sbjct: 189 FVIVFIDDILIY--SKSKEEHEEHLRMVLEMLREKKLYAKFSKCEFWLDTVSFLGHVVSK 246
Query: 421 EGIQVDPTKIKAILEWVRPTS-------VGLAGYYRRFVKDFSRIARPLT 549
+G+ VDP+KI+ + WVRPT+ VGLA YYR+FVK FS IA LT
Sbjct: 247 DGVMVDPSKIETVKNWVRPTNVSEIRSFVGLASYYRQFVKGFSSIASQLT 296
Score = 75.5 bits (184), Expect(2) = 1e-37
Identities = 44/77 (57%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Frame = +2
Query: 2 RELNKVTIKNKYLLPRIEDLFD*LR--CVFQD-QLEIGISSVADEARSIHKTTF--RYGH 166
R+LNKVTIKNKY LPRI+DLFD L+ CVF L G + A + KT F RYGH
Sbjct: 98 RQLNKVTIKNKYPLPRIDDLFDQLQGACVFSKIDLRSGYHQLKIRATDVPKTAFRTRYGH 157
Query: 167 YEIVVMPFGLTNTHTVF 217
YE VVM FGLTN F
Sbjct: 158 YEFVVMSFGLTNAPAAF 174
>gb|AAO45752.1| pol protein [Cucumis melo subsp. melo]
Length = 923
Score = 112 bits (280), Expect(2) = 2e-37
Identities = 57/111 (51%), Positives = 78/111 (70%), Gaps = 7/111 (6%)
Frame = +1
Query: 238 TWINVLLYSLMIYWCIRRKK*HEQHLRQILEVL*KQKWYAKLSKCELCLKEVAFLGYVIS 417
T++ V + ++IY + + HE+HLR +L+ L K YAK SKCE LK+V+FLG+V+S
Sbjct: 140 TFVIVFIDDILIY--SKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVS 197
Query: 418 KEGIQVDPTKIKAILEWVRPTSV-------GLAGYYRRFVKDFSRIARPLT 549
K G+ VDP KI+A+ W RP++V GLAGYYRRFV++FSRIA PLT
Sbjct: 198 KAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLT 248
Score = 69.7 bits (169), Expect(2) = 2e-37
Identities = 40/77 (51%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Frame = +2
Query: 2 RELNKVTIKNKYLLPRIEDLFD*LR--CVFQD-QLEIGISSVADEARSIHKTTF--RYGH 166
RELNKVT+KN+Y LPRI+DLFD L+ VF L G + + + KT F RYGH
Sbjct: 50 RELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGH 109
Query: 167 YEIVVMPFGLTNTHTVF 217
Y+ +VM FGLTN VF
Sbjct: 110 YQFIVMSFGLTNAPAVF 126
Score = 60.8 bits (146), Expect = 2e-07
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 6/79 (7%)
Frame = +3
Query: 78 VFSKINLRSGYHQLPMK----PEASIRQHSG--MDIMKSWLCHLV*RILIQYLNRTFHMY 239
VFSKI+LRSGYHQL +K P+ + R G I+ S+ + + +NR F +
Sbjct: 78 VFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYQFIVMSFGLTNAPAVFMDLMNRVFREF 137
Query: 240 LDKCVVVFIDDILVYSKKE 296
LD V+VFIDDIL+YSK E
Sbjct: 138 LDTFVIVFIDDILIYSKTE 156
>gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]
Length = 1475
Score = 113 bits (283), Expect(2) = 2e-37
Identities = 60/111 (54%), Positives = 77/111 (69%), Gaps = 7/111 (6%)
Frame = +1
Query: 238 TWINVLLYSLMIYWCIRRKK*HEQHLRQILEVL*KQKWYAKLSKCELCLKEVAFLGYVIS 417
+++ V + ++IY R + HEQHLR +L+ L Q+ YAK SKC+ L VAFLG+V+S
Sbjct: 823 SFVIVFIDDILIY--SRSRGDHEQHLRVVLQTLRDQRLYAKFSKCQFWLDSVAFLGHVVS 880
Query: 418 KEGIQVDPTKIKAILEWVRPTS-------VGLAGYYRRFVKDFSRIARPLT 549
KEGI VDP KI+AI +W RPTS VGLAGYYRRFV+ FS +A PLT
Sbjct: 881 KEGIMVDPAKIEAIRDWARPTSVTEIRSFVGLAGYYRRFVESFSTLATPLT 931
Score = 68.2 bits (165), Expect(2) = 2e-37
Identities = 40/77 (51%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Frame = +2
Query: 2 RELNKVTIKNKYLLPRIEDLFD*LR--CVFQD-QLEIGISSVADEARSIHKTTF--RYGH 166
R+LNKVT+KN+Y LPRI+DLFD L+ VF L + A I KT F RYGH
Sbjct: 733 RQLNKVTVKNRYPLPRIDDLFDQLQGASVFSKIDLRFDYHQLRIRAADIPKTAFRTRYGH 792
Query: 167 YEIVVMPFGLTNTHTVF 217
YE++VM FGLTN F
Sbjct: 793 YELLVMSFGLTNAPAAF 809
>ref|XP_006366848.1| PREDICTED: uncharacterized protein LOC102605741 [Solanum tuberosum]
Length = 823
Score = 114 bits (285), Expect(2) = 2e-37
Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 7/111 (6%)
Frame = +1
Query: 238 TWINVLLYSLMIYWCIRRKK*HEQHLRQILEVL*KQKWYAKLSKCELCLKEVAFLGYVIS 417
+++ V + ++IY R K+ HE HLR +L +L ++K YAK SKCE L VAFLG+V+S
Sbjct: 266 SFVIVFIDDILIY--SRSKEKHEHHLRIVLGILKEKKLYAKFSKCEFWLSSVAFLGHVVS 323
Query: 418 KEGIQVDPTKIKAILEWVRPTSV-------GLAGYYRRFVKDFSRIARPLT 549
KEGI VDP KI+A+ +WVRP SV GLAGYYRRFV+ FS IA PLT
Sbjct: 324 KEGIMVDPKKIEAVRDWVRPASVTEIRSFLGLAGYYRRFVEGFSSIASPLT 374
Score = 67.4 bits (163), Expect(2) = 2e-37
Identities = 39/77 (50%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Frame = +2
Query: 2 RELNKVTIKNKYLLPRIEDLFD*LR--CVFQD-QLEIGISSVADEARSIHKTTF--RYGH 166
R+LNKVTI+NKY +PRI+DLFD L+ +F L G + I KT F RYGH
Sbjct: 176 RQLNKVTIRNKYPIPRIDDLFDQLQGASIFSKIDLRSGYHQLKVRVEDIPKTAFRTRYGH 235
Query: 167 YEIVVMPFGLTNTHTVF 217
YE +VM FGLTN F
Sbjct: 236 YEFLVMSFGLTNAPAAF 252
>gb|AEV42258.1| hypothetical protein [Beta vulgaris]
Length = 1553
Score = 110 bits (276), Expect(2) = 4e-37
Identities = 58/110 (52%), Positives = 76/110 (69%), Gaps = 7/110 (6%)
Frame = +1
Query: 241 WINVLLYSLMIYWCIRRKK*HEQHLRQILEVL*KQKWYAKLSKCELCLKEVAFLGYVISK 420
++ V + ++IY + K+ HE HLR IL+ L + YAK SKCE L+ V+FLG+ ISK
Sbjct: 740 FVVVFIDDILIY--SKNKEEHEDHLRVILQTLRDNQLYAKFSKCEFWLERVSFLGHFISK 797
Query: 421 EGIQVDPTKIKAILEWVRPTSV-------GLAGYYRRFVKDFSRIARPLT 549
EG+ VDP KIKA+ EW P +V GLAGYYRRFVKDFS+IA+P+T
Sbjct: 798 EGVLVDPAKIKAVSEWPTPKNVTDIRSFLGLAGYYRRFVKDFSKIAKPMT 847
Score = 70.1 bits (170), Expect(2) = 4e-37
Identities = 41/77 (53%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Frame = +2
Query: 2 RELNKVTIKNKYLLPRIEDLFD*LR---CVFQDQLEIGISSVADEARSIHKTTF--RYGH 166
RELN VT+KNKY LPRI+DLFD L+ + L G + I KT F RYGH
Sbjct: 649 RELNNVTVKNKYPLPRIDDLFDQLQGAGMFSKIDLRSGYHQLRIVDHDIPKTAFRTRYGH 708
Query: 167 YEIVVMPFGLTNTHTVF 217
YE VMPFGLTN VF
Sbjct: 709 YEFTVMPFGLTNAPAVF 725
Score = 60.8 bits (146), Expect = 2e-07
Identities = 37/81 (45%), Positives = 49/81 (60%), Gaps = 7/81 (8%)
Frame = +3
Query: 75 GVFSKINLRSGYHQLPMK----PEASIRQHSG---MDIMKSWLCHLV*RILIQYLNRTFH 233
G+FSKI+LRSGYHQL + P+ + R G +M L + + + +NR F
Sbjct: 676 GMFSKIDLRSGYHQLRIVDHDIPKTAFRTRYGHYEFTVMPFGLTNAP-AVFMDLMNRIFR 734
Query: 234 MYLDKCVVVFIDDILVYSKKE 296
YLDK VVVFIDDIL+YSK +
Sbjct: 735 PYLDKFVVVFIDDILIYSKNK 755
>emb|CAA73042.1| polyprotein [Ananas comosus]
Length = 871
Score = 100 bits (250), Expect(2) = 8e-37
Identities = 54/110 (49%), Positives = 76/110 (69%), Gaps = 7/110 (6%)
Frame = +1
Query: 241 WINVLLYSLMIYWCIRRKK*HEQHLRQILEVL*KQKWYAKLSKCELCLKEVAFLGYVISK 420
++ V + +++Y R HE+HLR +L+VL +++ Y KL KCE L+EVAFLG++IS
Sbjct: 165 FVVVFIDDILVY--SRSDADHEEHLRIVLQVLREKELYVKLKKCEFWLREVAFLGHLISG 222
Query: 421 EGIQVDPTKIKAILEWVRPTSV-------GLAGYYRRFVKDFSRIARPLT 549
GI VDP KI+AI +W R TSV GLAGYYRRFV+ F++++ PLT
Sbjct: 223 SGIAVDPKKIEAIKDWPRLTSVTEIRSFLGLAGYYRRFVERFAKLSTPLT 272
Score = 79.0 bits (193), Expect(2) = 8e-37
Identities = 44/77 (57%), Positives = 51/77 (66%), Gaps = 5/77 (6%)
Frame = +2
Query: 2 RELNKVTIKNKYLLPRIEDLFD*LR--CVFQD-QLEIGISSVADEARSIHKTTF--RYGH 166
RELNKVTIKNKY LPRI+DLFD L+ CV+ L+ G + + + KT F RYGH
Sbjct: 74 RELNKVTIKNKYPLPRIDDLFDQLQGSCVYSKIDLQSGYHQLKIKPEDVSKTAFRTRYGH 133
Query: 167 YEIVVMPFGLTNTHTVF 217
YE VMPFGLTN T F
Sbjct: 134 YEFAVMPFGLTNAPTAF 150
Score = 58.5 bits (140), Expect = 1e-06
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Frame = +3
Query: 78 VFSKINLRSGYHQLPMKPEASIRQ-------HSGMDIMKSWLCHLV*RILIQYLNRTFHM 236
V+SKI+L+SGYHQL +KPE + H +M L + + +NR F
Sbjct: 102 VYSKIDLQSGYHQLKIKPEDVSKTAFRTRYGHYEFAVMPFGLTNAP-TAFMDLMNRVFKP 160
Query: 237 YLDKCVVVFIDDILVYSKKE 296
YLD+ VVVFIDDILVYS+ +
Sbjct: 161 YLDRFVVVFIDDILVYSRSD 180
>ref|XP_004228800.1| PREDICTED: polyprotein P3-like, partial [Solanum lycopersicum]
Length = 707
Score = 107 bits (266), Expect(2) = 1e-36
Identities = 54/109 (49%), Positives = 76/109 (69%), Gaps = 7/109 (6%)
Frame = +1
Query: 241 WINVLLYSLMIYWCIRRKK*HEQHLRQILEVL*KQKWYAKLSKCELCLKEVAFLGYVISK 420
++ V + +++Y + KK HE+HLR +LE+L ++K YAK SKCE + V+FLG+V+SK
Sbjct: 151 FVIVFIDDILVY--SKSKKEHEEHLRMVLEMLREKKLYAKFSKCEFWIDAVSFLGHVVSK 208
Query: 421 EGIQVDPTKIKAILEWVRPTS-------VGLAGYYRRFVKDFSRIARPL 546
+G+ VDP+KI+ + WVRPT+ VGLA YYRRFVK FS IA L
Sbjct: 209 DGVMVDPSKIETVKNWVRPTNVSEIRSFVGLASYYRRFVKGFSSIASQL 257
Score = 72.4 bits (176), Expect(2) = 1e-36
Identities = 43/77 (55%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Frame = +2
Query: 2 RELNKVTIKNKYLLPRIEDLFD*LR--CVFQD-QLEIGISSVADEARSIHKTTF--RYGH 166
R+LNKVTIKNKY LP I+DLFD L+ CVF L G + A + KT F RYGH
Sbjct: 60 RQLNKVTIKNKYPLPHIDDLFDQLQGACVFSKIDLRSGYHQLKLRATDVPKTAFRTRYGH 119
Query: 167 YEIVVMPFGLTNTHTVF 217
YE VVM FGLTN F
Sbjct: 120 YEFVVMSFGLTNAPAPF 136
>dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana triflora]
Length = 1152
Score = 114 bits (286), Expect(2) = 2e-36
Identities = 59/110 (53%), Positives = 82/110 (74%), Gaps = 7/110 (6%)
Frame = +1
Query: 241 WINVLLYSLMIYWCIRRKK*HEQHLRQILEVL*KQKWYAKLSKCELCLKEVAFLGYVISK 420
++ V + ++IY + +K HE+HLR +L+ L ++K YAK SKCE LK+V+FLG+VIS
Sbjct: 361 FVVVFIDDILIY--SKDEKEHEEHLRIVLQTLKEKKLYAKFSKCEFWLKQVSFLGHVISG 418
Query: 421 EGIQVDPTKIKAILEWVRPTSV-------GLAGYYRRFVKDFSRIARPLT 549
+GIQVDP KI+A+ +W RPT+V GLAGYYR+FV+DFS+IA PLT
Sbjct: 419 DGIQVDPAKIEAVSKWPRPTTVTEIRSFLGLAGYYRKFVQDFSKIATPLT 468
Score = 63.9 bits (154), Expect(2) = 2e-36
Identities = 39/77 (50%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Frame = +2
Query: 2 RELNKVTIKNKYLLPRIEDLFD*L--RCVFQD-QLEIGISSVADEARSIHKTTF--RYGH 166
R LN +TIKNKY LPRI+DLF+ L + VF L G + + KT F RYGH
Sbjct: 270 RALNNLTIKNKYPLPRIDDLFNQLQGKKVFSKIDLRSGYHQLKIKVADRPKTAFSTRYGH 329
Query: 167 YEIVVMPFGLTNTHTVF 217
YE +VMPFGLTN + F
Sbjct: 330 YEFLVMPFGLTNAPSAF 346
Score = 56.2 bits (134), Expect = 5e-06
Identities = 37/80 (46%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Frame = +3
Query: 78 VFSKINLRSGYHQLPMK----PEASIRQHSG---MDIMKSWLCHLV*RILIQYLNRTFHM 236
VFSKI+LRSGYHQL +K P+ + G +M L + + + R F
Sbjct: 298 VFSKIDLRSGYHQLKIKVADRPKTAFSTRYGHYEFLVMPFGLTNAP-SAFMDLMQRVFMP 356
Query: 237 YLDKCVVVFIDDILVYSKKE 296
YLDK VVVFIDDIL+YSK E
Sbjct: 357 YLDKFVVVFIDDILIYSKDE 376
>gb|AAL31683.1|AC092390_4 putative polyprotein [Oryza sativa Japonica Group]
gi|108709934|gb|ABF97729.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 962
Score = 117 bits (292), Expect(2) = 2e-36
Identities = 59/110 (53%), Positives = 81/110 (73%), Gaps = 7/110 (6%)
Frame = +1
Query: 241 WINVLLYSLMIYWCIRRKK*HEQHLRQILEVL*KQKWYAKLSKCELCLKEVAFLGYVISK 420
++ V + ++IY + ++ H+QHLR +LE L + + YAKLSKCE L +VAFLG++I+K
Sbjct: 472 FVVVFIDDILIY--SKNEEEHKQHLRLVLEKLRQHQLYAKLSKCEFWLDQVAFLGHIITK 529
Query: 421 EGIQVDPTKIKAILEWVRPTSV-------GLAGYYRRFVKDFSRIARPLT 549
EG+ VDP KIKA++EW PTSV GLAGYYRRF+KDFS IA+P+T
Sbjct: 530 EGVAVDPQKIKAVMEWKTPTSVSEIRSFLGLAGYYRRFIKDFSAIAKPMT 579
Score = 61.2 bits (147), Expect(2) = 2e-36
Identities = 39/77 (50%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Frame = +2
Query: 2 RELNKVTIKNKYLLPRIEDLFD*LR--CVFQD-QLEIGISSVADEARSIHKTTF--RYGH 166
R LN+VTIKNKY LPRI+DLFD L+ +F L G + I KT F RYG
Sbjct: 381 RVLNEVTIKNKYPLPRIDDLFDQLKGASIFSKIDLRSGYHQLKIRQEDIPKTAFVIRYGL 440
Query: 167 YEIVVMPFGLTNTHTVF 217
YE VM FGLTN F
Sbjct: 441 YEFTVMAFGLTNAPAYF 457
>ref|XP_006598618.1| PREDICTED: uncharacterized protein LOC102669650 [Glycine max]
Length = 728
Score = 105 bits (262), Expect(2) = 5e-36
Identities = 52/111 (46%), Positives = 78/111 (70%), Gaps = 7/111 (6%)
Frame = +1
Query: 238 TWINVLLYSLMIYWCIRRKK*HEQHLRQILEVL*KQKWYAKLSKCELCLKEVAFLGYVIS 417
+++ V + +++Y R + HE+HLR +L+ L + YAKLSKC+ L+EV+FLG++IS
Sbjct: 591 SFVVVFIDDILVYSKTREE--HEEHLRVVLQTLKDNRLYAKLSKCDFWLEEVSFLGHIIS 648
Query: 418 KEGIQVDPTKIKAILEWVRPTSV-------GLAGYYRRFVKDFSRIARPLT 549
K GI VDP+K++A++ W P SV GLAGYYRRF++ FS++A PLT
Sbjct: 649 KGGIAVDPSKVEAVMSWESPKSVFEIMSFLGLAGYYRRFIEGFSKLALPLT 699
Score = 71.6 bits (174), Expect(2) = 5e-36
Identities = 41/77 (53%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Frame = +2
Query: 2 RELNKVTIKNKYLLPRIEDLFD*L--RCVFQD-QLEIGISSVADEARSIHKTTF--RYGH 166
R+LNKVTIKN+Y LPRI+DL D L CVF L G + + + KT F RYGH
Sbjct: 501 RQLNKVTIKNRYPLPRIDDLMDQLVGACVFSKIDLRSGYHQIRVKPEDVLKTAFRTRYGH 560
Query: 167 YEIVVMPFGLTNTHTVF 217
YE +VMPFG+TN VF
Sbjct: 561 YEYLVMPFGVTNAPGVF 577
Score = 66.2 bits (160), Expect = 5e-09
Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 7/78 (8%)
Frame = +3
Query: 78 VFSKINLRSGYHQLPMKPEASIRQ-------HSGMDIMKSWLCHLV*RILIQYLNRTFHM 236
VFSKI+LRSGYHQ+ +KPE ++ H +M + + + + Y+NR FH
Sbjct: 529 VFSKIDLRSGYHQIRVKPEDVLKTAFRTRYGHYEYLVMPFGVTNAP-GVFMDYMNRIFHP 587
Query: 237 YLDKCVVVFIDDILVYSK 290
YLD VVVFIDDILVYSK
Sbjct: 588 YLDSFVVVFIDDILVYSK 605
>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
Length = 1602
Score = 101 bits (252), Expect(2) = 1e-35
Identities = 54/108 (50%), Positives = 72/108 (66%), Gaps = 7/108 (6%)
Frame = +1
Query: 247 NVLLYSLMIYWCIRRKK*HEQHLRQILEVL*KQKWYAKLSKCELCLKEVAFLGYVISKEG 426
++L+YS R ++ H HLR +L+ L ++ YAK SKCE LK VAFLG+++S +G
Sbjct: 819 DILIYS-------RNEEDHASHLRTVLQTLKDKELYAKFSKCEFWLKSVAFLGHIVSGDG 871
Query: 427 IQVDPTKIKAILEWVRPTS-------VGLAGYYRRFVKDFSRIARPLT 549
I+VD KI+A+ W RPTS +GLAGYYRRFV+ FS IA PLT
Sbjct: 872 IKVDTRKIEAVQNWPRPTSPTEIRSFLGLAGYYRRFVEGFSSIASPLT 919
Score = 73.9 bits (180), Expect(2) = 1e-35
Identities = 42/77 (54%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Frame = +2
Query: 2 RELNKVTIKNKYLLPRIEDLFD*LR---CVFQDQLEIGISSVADEARSIHKTTF--RYGH 166
R+LNKVTIKNKY LPRI+DLFD L+ C + L G + R I KT F RYGH
Sbjct: 721 RQLNKVTIKNKYPLPRIDDLFDQLQGATCFSKIDLRSGYHQLRVRERDIPKTAFRTRYGH 780
Query: 167 YEIVVMPFGLTNTHTVF 217
YE +VM FGLTN F
Sbjct: 781 YEFLVMSFGLTNAPAAF 797
>gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1515
Score = 101 bits (252), Expect(2) = 1e-35
Identities = 54/108 (50%), Positives = 72/108 (66%), Gaps = 7/108 (6%)
Frame = +1
Query: 247 NVLLYSLMIYWCIRRKK*HEQHLRQILEVL*KQKWYAKLSKCELCLKEVAFLGYVISKEG 426
++L+YS R ++ H HLR +L+ L ++ YAK SKCE LK VAFLG+++S +G
Sbjct: 813 DILIYS-------RNEEDHASHLRTVLQTLKDKELYAKFSKCEFWLKSVAFLGHIVSGDG 865
Query: 427 IQVDPTKIKAILEWVRPTS-------VGLAGYYRRFVKDFSRIARPLT 549
I+VD KI+A+ W RPTS +GLAGYYRRFV+ FS IA PLT
Sbjct: 866 IKVDTRKIEAVQNWPRPTSPTEIRSFLGLAGYYRRFVEGFSSIASPLT 913
Score = 73.9 bits (180), Expect(2) = 1e-35
Identities = 42/77 (54%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Frame = +2
Query: 2 RELNKVTIKNKYLLPRIEDLFD*LR---CVFQDQLEIGISSVADEARSIHKTTF--RYGH 166
R+LNKVTIKNKY LPRI+DLFD L+ C + L G + R I KT F RYGH
Sbjct: 715 RQLNKVTIKNKYPLPRIDDLFDQLQGATCFSKIDLRSGYHQLRVRERDIPKTAFRTRYGH 774
Query: 167 YEIVVMPFGLTNTHTVF 217
YE +VM FGLTN F
Sbjct: 775 YEFLVMSFGLTNAPAAF 791
>gb|ABA98852.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1275
Score = 97.4 bits (241), Expect(3) = 1e-35
Identities = 48/97 (49%), Positives = 67/97 (69%), Gaps = 7/97 (7%)
Frame = +1
Query: 280 CIRRKK*HEQHLRQILEVL*KQKWYAKLSKCELCLKEVAFLGYVISKEGIQVDPTKIKAI 459
C + ++ H + LR I+E L + +AK SKCE L VAFLG+VIS GI+VDP+K++A+
Sbjct: 569 CSKNEEEHAEQLRLIIEKLRGHQLFAKFSKCEFWLDRVAFLGHVISSNGIEVDPSKVEAV 628
Query: 460 LEWVRPTSV-------GLAGYYRRFVKDFSRIARPLT 549
L W P +V GLAGYYRRF++ FS++ARP+T
Sbjct: 629 LAWNPPKNVSEIRSFLGLAGYYRRFIEGFSKLARPMT 665
Score = 60.1 bits (144), Expect(3) = 1e-35
Identities = 39/74 (52%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Frame = +2
Query: 2 RELNKVTIKNKYLLPRIEDLFD*LRCVFQDQLEIGISSVADEARSIHKTTF--RYGHYEI 175
R LN+VTIKNKY LPRI+DLFD L V +L+I + I KT F RYG YE
Sbjct: 480 RALNEVTIKNKYPLPRIDDLFDQLEGV---KLKI-------RSEDIRKTAFSTRYGLYEF 529
Query: 176 VVMPFGLTNTHTVF 217
VM FGLTN F
Sbjct: 530 TVMSFGLTNAPAFF 543
Score = 38.5 bits (88), Expect(3) = 1e-35
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3
Query: 216 LNRTFHMYLDKCVVVFIDDILVYSKKE 296
+N+ F YLDK VVVFIDDIL+ SK E
Sbjct: 547 MNKIFMEYLDKFVVVFIDDILICSKNE 573
>gb|EOY03146.1| Retrotransposon protein, putative [Theobroma cacao]
Length = 1480
Score = 106 bits (264), Expect(2) = 2e-35
Identities = 57/110 (51%), Positives = 77/110 (70%), Gaps = 7/110 (6%)
Frame = +1
Query: 241 WINVLLYSLMIYWCIRRKK*HEQHLRQILEVL*KQKWYAKLSKCELCLKEVAFLGYVISK 420
++ V + ++IY R + HEQHL+ +L++L + + YAK SKCE L+ VAFLG+V+S+
Sbjct: 791 FVVVFIDDILIYSKSREE--HEQHLKIVLQILREHRLYAKFSKCEFWLERVAFLGHVVSR 848
Query: 421 EGIQVDPTKIKAILEWVRPTS-------VGLAGYYRRFVKDFSRIARPLT 549
EGIQVD KI+A+ +W R TS VGLAGYYRRFVKDFS+I LT
Sbjct: 849 EGIQVDTKKIEAVEKWPRSTSVTEIRSFVGLAGYYRRFVKDFSKIVALLT 898
Score = 68.9 bits (167), Expect(2) = 2e-35
Identities = 39/76 (51%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Frame = +2
Query: 5 ELNKVTIKNKYLLPRIEDLFD*L---RCVFQDQLEIGISSVADEARSIHKTTF--RYGHY 169
+LNKVT+KNKY LPRI+DLFD L +C + L G + I KT F RYGHY
Sbjct: 701 KLNKVTVKNKYPLPRIDDLFDQLQGAQCFSKIDLRSGYHQLRIRNEDIPKTAFRTRYGHY 760
Query: 170 EIVVMPFGLTNTHTVF 217
E +VM FGLTN F
Sbjct: 761 EFLVMSFGLTNAPAAF 776
Score = 57.0 bits (136), Expect = 3e-06
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Frame = +3
Query: 81 FSKINLRSGYHQLPMK----PEASIRQHSGMD--IMKSWLCHLV*RILIQYLNRTFHMYL 242
FSKI+LRSGYHQL ++ P+ + R G ++ S+ + +NR F YL
Sbjct: 729 FSKIDLRSGYHQLRIRNEDIPKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPYL 788
Query: 243 DKCVVVFIDDILVYSK 290
DK VVVFIDDIL+YSK
Sbjct: 789 DKFVVVFIDDILIYSK 804
>ref|XP_004515382.1| PREDICTED: uncharacterized protein LOC101499978 [Cicer arietinum]
Length = 1352
Score = 101 bits (252), Expect(2) = 2e-35
Identities = 51/107 (47%), Positives = 78/107 (72%), Gaps = 7/107 (6%)
Frame = +1
Query: 238 TWINVLLYSLMIYWCIRRKK*HEQHLRQILEVL*KQKWYAKLSKCELCLKEVAFLGYVIS 417
+++ V + +++Y + K+ H +HLR +L+ L +++ +AKLSKCE L+EV+FLG++IS
Sbjct: 610 SFVVVFIDDILVY--SKTKEEHGEHLRIVLKTLKEKQLFAKLSKCEFWLEEVSFLGHIIS 667
Query: 418 KEGIQVDPTKIKAILEWVRPTSV-------GLAGYYRRFVKDFSRIA 537
K GI VDPTK++++LEW P SV GLAGYYRRF++ FSR+A
Sbjct: 668 KGGIVVDPTKVESVLEWKAPKSVTEIRSFLGLAGYYRRFIEGFSRLA 714
Score = 73.6 bits (179), Expect(2) = 2e-35
Identities = 43/75 (57%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Frame = +2
Query: 8 LNKVTIKNKYLLPRIEDLFD*LR--CVFQD-QLEIGISSVADEARSIHKTTF--RYGHYE 172
LNKVTIKNKY LPRI+DL D LR CVF L G + + KT F RYGHYE
Sbjct: 522 LNKVTIKNKYPLPRIDDLMDQLRGSCVFSKIDLRSGYHQIRVKPSDTPKTAFRTRYGHYE 581
Query: 173 IVVMPFGLTNTHTVF 217
+VMPFG+TN TVF
Sbjct: 582 YLVMPFGVTNAPTVF 596
Score = 63.9 bits (154), Expect = 2e-08
Identities = 37/78 (47%), Positives = 48/78 (61%), Gaps = 7/78 (8%)
Frame = +3
Query: 78 VFSKINLRSGYHQLPMKPEASIRQ-------HSGMDIMKSWLCHLV*RILIQYLNRTFHM 236
VFSKI+LRSGYHQ+ +KP + + H +M + + + + Y+NR FH
Sbjct: 548 VFSKIDLRSGYHQIRVKPSDTPKTAFRTRYGHYEYLVMPFGVTNAP-TVFMDYMNRIFHP 606
Query: 237 YLDKCVVVFIDDILVYSK 290
YLD VVVFIDDILVYSK
Sbjct: 607 YLDSFVVVFIDDILVYSK 624